AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1448510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448510 MtrunA17_Chr3g0126511 88.261 230 14 3 222 448 145 364 3.91e-127 372
Msa1448510 MtrunA17_Chr3g0126511 97.561 164 4 0 1 164 1 164 8.15e-115 341
Msa1448510 MtrunA17_Chr3g0136711 60.215 186 64 1 239 424 105 280 5.58e-74 234
Msa1448510 MtrunA17_Chr3g0136711 56.471 85 37 0 80 164 20 104 1.03e-25 106
Msa1448510 MtrunA17_Chr1g0150451 60.753 186 63 1 239 424 148 323 9.26e-74 235
Msa1448510 MtrunA17_Chr1g0150451 48.214 112 51 2 53 164 43 147 1.63e-26 109
Msa1448510 MtrunA17_Chr1g0212961 57.219 187 66 3 239 425 166 338 1.78e-66 216
Msa1448510 MtrunA17_Chr1g0212961 42.405 158 62 4 26 163 16 164 1.02e-27 113
Msa1448510 MtrunA17_Chr4g0050381 33.807 352 142 11 77 424 12 276 1.09e-43 154
Msa1448510 MtrunA17_Chr2g0279151 44.974 189 88 5 239 424 105 280 2.59e-40 145
Msa1448510 MtrunA17_Chr4g0070871 45.213 188 67 5 260 422 325 501 4.26e-38 145
Msa1448510 MtrunA17_Chr3g0115851 41.270 189 95 5 239 424 106 281 1.37e-37 138
Msa1448510 MtrunA17_Chr3g0112291 41.837 196 81 5 260 433 200 384 3.39e-36 137
Msa1448510 MtrunA17_Chr1g0150781 43.005 193 77 4 260 430 368 549 3.94e-36 140
Msa1448510 MtrunA17_Chr3g0105371 38.860 193 97 4 241 426 162 340 5.89e-36 135
Msa1448510 MtrunA17_Chr3g0105351 37.824 193 99 4 241 426 138 316 7.59e-36 134
Msa1448510 MtrunA17_Chr5g0426141 41.270 189 95 5 239 424 106 281 2.09e-35 132
Msa1448510 MtrunA17_Chr3g0135961 42.188 192 78 5 260 429 364 544 1.94e-34 135
Msa1448510 MtrunA17_Chr5g0430481 38.860 193 97 4 241 426 198 376 2.00e-34 132
Msa1448510 MtrunA17_Chr8g0360351 42.553 188 92 5 241 425 108 282 2.02e-34 130
Msa1448510 MtrunA17_Chr2g0299981 40.104 192 82 4 260 429 360 540 1.05e-33 133
Msa1448510 MtrunA17_Chr2g0317021 41.451 193 97 5 235 424 153 332 7.19e-33 127
Msa1448510 MtrunA17_Chr5g0435721 50.000 134 55 3 260 392 298 420 1.87e-31 125
Msa1448510 MtrunA17_Chr8g0389921 37.209 215 104 7 241 438 248 448 1.23e-29 120
Msa1448510 MtrunA17_Chr1g0150071 27.704 379 202 12 89 443 18 348 8.11e-29 116
Msa1448510 MtrunA17_Chr3g0136811 27.865 384 199 12 89 445 18 350 1.61e-28 115
Msa1448510 MtrunA17_Chr4g0051661 37.321 209 111 7 222 424 203 397 3.30e-28 115
Msa1448510 MtrunA17_Chr1g0171571 41.566 166 84 4 260 422 487 642 6.89e-28 116
Msa1448510 MtrunA17_Chr5g0396731 38.172 186 84 4 260 425 177 351 3.91e-26 108
Msa1448510 MtrunA17_Chr3g0144111 36.181 199 101 7 241 428 48 231 4.05e-26 106
Msa1448510 MtrunA17_Chr1g0158781 41.989 181 75 5 260 422 209 377 2.59e-24 103
Msa1448510 MtrunA17_Chr5g0407161 30.645 248 137 8 197 427 119 348 5.92e-24 102
Msa1448510 MtrunA17_Chr2g0293811 31.381 239 121 8 212 422 106 329 6.68e-24 102
Msa1448510 MtrunA17_Chr4g0001761 27.374 358 195 14 89 426 18 330 1.01e-23 102
Msa1448510 MtrunA17_Chr6g0483411 32.161 199 122 5 239 426 124 320 8.61e-22 95.9
Msa1448510 MtrunA17_Chr4g0065141 30.806 211 119 5 231 427 156 353 2.58e-21 95.1
Msa1448510 MtrunA17_Chr1g0194191 31.579 190 104 5 260 436 188 364 1.85e-20 92.8
Msa1448510 MtrunA17_Chr3g0138281 32.057 209 117 7 231 427 153 348 6.80e-19 88.2
Msa1448510 MtrunA17_Chr7g0272061 33.005 203 112 8 239 422 162 359 3.98e-18 85.9
Msa1448510 MtrunA17_Chr1g0192421 30.374 214 120 7 235 425 144 351 5.64e-18 85.1
Msa1448510 MtrunA17_Chr2g0295401 32.143 196 107 7 254 430 171 359 1.08e-17 84.3
Msa1448510 MtrunA17_Chr1g0185141 30.531 226 109 8 245 422 211 436 1.54e-17 85.5
Msa1448510 MtrunA17_Chr4g0067711 31.522 184 106 6 239 409 154 330 4.23e-17 82.4
Msa1448510 MtrunA17_Chr7g0263281 27.311 238 115 6 241 425 114 346 6.59e-16 79.0
Msa1448510 MtrunA17_Chr8g0371321 29.064 203 107 6 239 409 120 317 7.24e-16 79.0
Msa1448510 MtrunA17_Chr1g0207571 30.000 180 97 4 260 413 129 305 2.62e-15 77.4
Msa1448510 MtrunA17_Chr7g0256751 29.384 211 106 9 244 419 116 318 6.05e-15 76.6
Msa1448510 MtrunA17_Chr4g0004971 32.298 161 91 4 260 408 166 320 6.14e-15 75.9
Msa1448510 MtrunA17_Chr7g0221691 31.553 206 113 6 260 444 232 430 2.18e-14 75.1
Msa1448510 MtrunA17_Chr1g0213351 29.293 198 103 5 244 409 126 318 2.35e-14 74.3
Msa1448510 MtrunA17_Chr1g0151781 33.544 158 86 4 245 390 137 287 3.03e-14 73.9
Msa1448510 MtrunA17_Chr7g0243571 32.919 161 89 4 260 408 188 341 6.28e-14 73.6
Msa1448510 MtrunA17_Chr7g0249421 34.783 161 87 4 260 408 207 361 8.21e-14 73.2
Msa1448510 MtrunA17_Chr1g0153671 30.542 203 118 7 246 434 112 305 9.11e-14 72.8
Msa1448510 MtrunA17_Chr1g0175381 26.636 214 106 5 260 427 147 355 9.15e-14 72.8
Msa1448510 MtrunA17_Chr7g0256771 30.811 185 83 8 244 392 117 292 1.03e-13 71.6
Msa1448510 MtrunA17_Chr4g0022171 30.220 182 109 4 239 408 172 347 1.57e-13 72.4
Msa1448510 MtrunA17_Chr2g0324061 31.868 182 106 4 239 408 165 340 1.63e-13 72.4
Msa1448510 MtrunA17_Chr1g0209451 31.414 191 107 7 246 422 115 295 2.18e-13 71.6
Msa1448510 MtrunA17_Chr1g0181901 25.366 205 106 5 229 390 96 296 2.75e-13 71.2
Msa1448510 MtrunA17_Chr4g0068971 32.576 132 76 4 310 431 110 238 3.27e-13 69.7
Msa1448510 MtrunA17_Chr7g0250061 27.749 191 103 6 251 413 135 318 5.22e-13 70.5
Msa1448510 MtrunA17_Chr1g0187481 29.268 164 89 4 262 425 142 278 5.65e-13 68.9
Msa1448510 MtrunA17_Chr8g0342431 34.667 150 79 5 271 408 208 350 7.32e-13 70.1
Msa1448510 MtrunA17_Chr1g0211251 27.219 169 93 4 260 402 149 313 1.75e-12 68.9
Msa1448510 MtrunA17_Chr3g0089721 28.409 176 91 5 260 407 137 305 2.63e-12 68.2
Msa1448510 MtrunA17_Chr3g0089711 27.841 176 92 5 260 407 137 305 8.19e-12 66.6
Msa1448510 MtrunA17_Chr3g0089691 27.841 176 92 5 260 407 51 219 1.13e-11 65.5
Msa1448510 MtrunA17_Chr3g0133801 28.421 190 114 5 246 422 113 293 1.44e-11 66.2
Msa1448510 MtrunA17_Chr4g0066371 26.941 219 117 8 241 424 130 340 1.53e-11 65.9
Msa1448510 MtrunA17_Chr7g0225501 31.579 171 102 5 260 422 154 317 5.39e-11 64.3
Msa1448510 MtrunA17_Chr1g0166481 28.485 165 85 4 263 425 141 274 5.51e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448510 AT5G53140.1 68.282 227 59 3 222 445 152 368 1.47e-98 302
Msa1448510 AT5G53140.1 50.279 179 66 6 1 164 1 171 1.45e-43 158
Msa1448510 AT5G53140.2 68.282 227 59 3 222 445 152 368 1.47e-98 302
Msa1448510 AT5G53140.2 50.279 179 66 6 1 164 1 171 1.45e-43 158
Msa1448510 AT4G31750.2 61.828 186 61 1 239 424 104 279 2.93e-74 235
Msa1448510 AT4G31750.2 54.118 85 39 0 80 164 19 103 1.94e-25 106
Msa1448510 AT4G31750.1 56.221 217 72 2 239 442 104 310 4.14e-74 235
Msa1448510 AT4G31750.1 54.118 85 39 0 80 164 19 103 2.84e-25 105
Msa1448510 AT4G31750.3 56.221 217 72 2 239 442 104 310 4.14e-74 235
Msa1448510 AT4G31750.3 54.118 85 39 0 80 164 19 103 2.84e-25 105
Msa1448510 AT5G10740.1 61.828 186 61 1 239 424 104 279 2.02e-72 232
Msa1448510 AT5G10740.1 56.098 82 36 0 83 164 22 103 7.79e-25 105
Msa1448510 AT5G10740.2 61.828 186 61 1 239 424 104 279 2.02e-72 232
Msa1448510 AT5G10740.2 56.098 82 36 0 83 164 22 103 7.79e-25 105
Msa1448510 AT5G24940.1 60.215 186 64 1 239 424 104 279 1.67e-69 228
Msa1448510 AT5G24940.1 57.831 83 35 0 82 164 21 103 2.12e-25 108
Msa1448510 AT1G43900.1 55.914 186 71 2 239 424 194 368 1.15e-65 215
Msa1448510 AT1G43900.1 55.556 72 32 0 92 163 121 192 1.01e-21 96.7
Msa1448510 AT1G78200.1 30.636 346 152 7 83 424 21 282 1.23e-40 147
Msa1448510 AT1G78200.3 30.636 346 152 7 83 424 21 282 1.23e-40 147
Msa1448510 AT1G78200.2 30.636 346 152 7 83 424 21 282 1.23e-40 147
Msa1448510 AT1G78200.5 31.464 321 133 6 107 424 1 237 8.07e-40 143
Msa1448510 AT1G78200.4 31.464 321 133 6 107 424 1 237 8.07e-40 143
Msa1448510 AT1G34750.2 44.681 188 88 5 240 424 107 281 2.69e-38 140
Msa1448510 AT1G34750.2 37.500 88 54 1 77 163 17 104 6.77e-11 63.5
Msa1448510 AT1G34750.1 44.681 188 88 5 240 424 107 281 2.69e-38 140
Msa1448510 AT1G34750.1 37.500 88 54 1 77 163 17 104 6.77e-11 63.5
Msa1448510 AT1G34750.3 44.681 188 88 5 240 424 107 281 2.69e-38 140
Msa1448510 AT1G34750.3 37.500 88 54 1 77 163 17 104 6.77e-11 63.5
Msa1448510 AT1G22280.1 42.328 189 93 5 239 424 105 280 5.27e-37 137
Msa1448510 AT1G22280.3 42.328 189 93 5 239 424 111 286 5.33e-37 137
Msa1448510 AT2G20630.1 40.704 199 102 5 230 425 94 279 2.23e-35 132
Msa1448510 AT4G28400.3 40.704 199 102 5 230 425 76 261 4.10e-35 131
Msa1448510 AT4G28400.1 40.704 199 102 5 230 425 98 283 5.51e-35 132
Msa1448510 AT1G72770.4 42.188 192 78 5 260 429 326 506 8.94e-35 135
Msa1448510 AT1G72770.1 42.188 192 78 5 260 429 326 506 8.94e-35 135
Msa1448510 AT1G72770.3 42.188 192 78 5 260 429 326 506 8.94e-35 135
Msa1448510 AT2G30020.1 41.969 193 92 5 241 426 215 394 1.02e-34 134
Msa1448510 AT1G07160.1 39.691 194 96 4 241 426 198 378 3.91e-34 132
Msa1448510 AT5G57050.2 41.579 190 73 4 260 422 191 369 1.54e-33 130
Msa1448510 AT4G26080.1 38.424 203 86 4 260 434 241 432 1.55e-33 131
Msa1448510 AT2G20630.2 39.899 198 103 5 230 424 94 278 3.57e-33 127
Msa1448510 AT5G57050.1 41.579 190 73 4 260 422 231 409 3.60e-33 130
Msa1448510 AT1G17550.1 40.625 192 81 5 260 429 326 506 7.05e-33 130
Msa1448510 AT1G17550.2 40.625 192 81 5 260 429 326 506 7.05e-33 130
Msa1448510 AT2G40180.1 41.026 195 94 6 239 426 207 387 8.18e-33 128
Msa1448510 AT2G29380.1 41.758 182 74 4 260 422 190 358 2.73e-32 126
Msa1448510 AT3G15260.2 41.579 190 95 5 239 425 113 289 3.08e-32 124
Msa1448510 AT3G15260.1 41.579 190 95 5 239 425 113 289 3.08e-32 124
Msa1448510 AT5G51760.2 39.234 209 91 4 244 426 185 383 1.27e-30 122
Msa1448510 AT5G51760.1 39.234 209 91 4 244 426 215 413 1.98e-30 122
Msa1448510 AT1G07430.1 49.254 134 56 3 260 392 233 355 2.28e-30 122
Msa1448510 AT1G67820.2 44.156 154 72 3 239 388 151 294 2.32e-30 122
Msa1448510 AT1G67820.1 44.156 154 72 3 239 388 187 330 4.59e-30 121
Msa1448510 AT3G11410.1 49.254 134 56 3 260 392 221 343 7.02e-30 120
Msa1448510 AT5G59220.1 50.000 134 55 3 260 392 221 343 7.76e-30 120
Msa1448510 AT2G40860.1 40.291 206 95 8 234 422 452 646 1.26e-28 119
Msa1448510 AT2G40860.4 40.291 206 95 8 234 422 354 548 1.62e-28 118
Msa1448510 AT3G51470.2 32.759 232 127 5 212 427 68 286 2.46e-28 114
Msa1448510 AT3G51470.1 33.190 232 126 6 212 427 112 330 6.04e-28 114
Msa1448510 AT2G34740.1 39.286 168 88 4 260 424 178 334 3.77e-27 111
Msa1448510 AT2G25070.1 26.963 382 189 13 89 437 18 342 4.93e-27 111
Msa1448510 AT2G25070.2 26.963 382 189 13 89 437 18 342 4.93e-27 111
Msa1448510 AT2G33700.1 33.333 234 123 8 212 427 129 347 6.61e-27 111
Msa1448510 AT4G31860.1 28.158 380 206 13 89 446 18 352 2.04e-26 110
Msa1448510 AT1G34750.4 44.805 154 67 6 240 390 107 245 2.33e-26 107
Msa1448510 AT1G34750.4 37.500 88 54 1 77 163 17 104 6.58e-11 62.8
Msa1448510 AT2G40860.2 38.021 192 92 7 234 408 452 633 5.42e-24 105
Msa1448510 AT3G62260.3 38.286 175 86 5 260 424 97 259 5.53e-24 101
Msa1448510 AT2G25620.1 34.673 199 101 5 240 422 169 354 1.93e-23 102
Msa1448510 AT2G25620.2 34.673 199 101 5 240 422 169 354 1.93e-23 102
Msa1448510 AT4G31860.3 29.167 312 164 11 89 388 18 284 2.11e-23 100
Msa1448510 AT3G62260.1 38.286 175 86 5 260 424 186 348 3.18e-23 101
Msa1448510 AT3G62260.2 38.286 175 86 5 260 424 187 349 3.31e-23 101
Msa1448510 AT4G28400.2 40.645 155 76 5 230 381 98 239 2.75e-22 96.3
Msa1448510 AT1G18030.1 34.343 198 117 5 239 425 154 349 2.93e-22 97.8
Msa1448510 AT4G31860.2 29.373 303 157 11 89 379 18 275 3.74e-22 96.3
Msa1448510 AT3G16800.4 38.750 160 83 4 260 408 75 230 4.84e-22 95.5
Msa1448510 AT3G16800.6 38.750 160 83 4 260 408 75 230 4.84e-22 95.5
Msa1448510 AT3G16800.2 38.750 160 83 4 260 408 170 325 2.11e-21 95.5
Msa1448510 AT3G16800.1 38.750 160 83 4 260 408 170 325 2.11e-21 95.5
Msa1448510 AT3G16800.3 38.750 160 83 4 260 408 170 325 2.11e-21 95.5
Msa1448510 AT3G63320.1 26.562 384 190 13 111 442 55 398 8.45e-21 94.7
Msa1448510 AT3G63340.12 26.014 419 219 15 95 442 72 470 1.54e-20 94.7
Msa1448510 AT3G63320.2 29.960 247 123 8 245 442 70 315 5.77e-20 91.7
Msa1448510 AT3G63340.11 25.829 422 216 15 95 442 72 470 6.39e-20 93.2
Msa1448510 AT3G63340.8 25.829 422 216 15 95 442 72 470 8.24e-20 93.2
Msa1448510 AT3G63340.7 25.829 422 216 15 95 442 72 470 9.13e-20 92.8
Msa1448510 AT3G63340.6 25.829 422 216 15 95 442 72 470 9.23e-20 92.8
Msa1448510 AT3G63340.3 25.829 422 216 15 95 442 72 470 9.23e-20 92.8
Msa1448510 AT3G63340.10 25.829 422 216 15 95 442 72 470 9.23e-20 92.8
Msa1448510 AT3G63340.4 25.829 422 216 15 95 442 72 470 9.23e-20 92.8
Msa1448510 AT3G63340.5 25.829 422 216 15 95 442 72 470 9.46e-20 92.8
Msa1448510 AT3G63340.1 25.829 422 216 15 95 442 72 470 9.46e-20 92.8
Msa1448510 AT1G48040.1 33.511 188 101 5 260 436 187 361 1.17e-19 90.9
Msa1448510 AT5G27930.1 33.516 182 103 4 239 408 156 331 2.64e-19 89.7
Msa1448510 AT5G27930.2 33.516 182 103 4 239 408 156 331 2.64e-19 89.7
Msa1448510 AT3G17250.1 32.402 179 95 5 260 425 229 394 4.16e-19 89.7
Msa1448510 AT3G05640.2 32.039 206 115 7 239 425 151 350 6.63e-19 88.2
Msa1448510 AT3G05640.1 32.039 206 115 7 239 425 151 350 6.63e-19 88.2
Msa1448510 AT3G05640.3 32.039 206 115 7 239 425 151 350 6.63e-19 88.2
Msa1448510 AT4G32950.1 32.990 194 103 6 260 434 139 324 7.62e-19 87.8
Msa1448510 AT1G18030.2 35.570 149 88 3 239 381 154 300 2.88e-18 85.5
Msa1448510 AT4G08260.1 32.973 185 92 6 244 422 48 206 3.65e-18 83.2
Msa1448510 AT5G36250.1 30.583 206 112 6 260 446 207 400 4.75e-17 83.6
Msa1448510 AT2G34740.2 40.000 125 61 4 260 381 192 305 7.24e-17 81.6
Msa1448510 AT2G34740.3 40.000 125 61 4 260 381 174 287 7.29e-17 81.6
Msa1448510 AT3G63340.2 23.956 455 216 14 95 442 72 503 2.28e-16 82.4
Msa1448510 AT1G79630.2 30.660 212 122 7 229 422 121 325 2.51e-16 81.3
Msa1448510 AT1G79630.7 30.660 212 122 7 229 422 121 325 2.51e-16 81.3
Msa1448510 AT5G01700.1 31.250 224 124 8 224 426 76 290 3.43e-16 79.7
Msa1448510 AT1G16220.1 28.814 236 144 6 229 446 168 397 6.58e-16 80.1
Msa1448510 AT1G79630.6 30.660 212 122 7 229 422 81 285 7.09e-16 79.7
Msa1448510 AT1G79630.3 30.660 212 122 7 229 422 81 285 7.09e-16 79.7
Msa1448510 AT1G79630.4 30.660 212 122 7 229 422 81 285 7.09e-16 79.7
Msa1448510 AT1G79630.5 30.660 212 122 7 229 422 81 285 7.09e-16 79.7
Msa1448510 AT1G79630.8 30.660 212 122 7 229 422 187 391 7.80e-16 80.1
Msa1448510 AT3G17090.1 28.319 226 109 5 249 427 142 361 8.05e-16 79.3
Msa1448510 AT1G79630.1 30.660 212 122 7 229 422 191 395 8.24e-16 80.1
Msa1448510 AT4G27800.1 29.717 212 99 7 247 421 147 345 8.82e-16 79.3
Msa1448510 AT5G01700.2 31.250 224 124 8 224 426 125 339 1.24e-15 78.6
Msa1448510 AT3G55050.1 28.713 202 107 5 244 413 130 326 1.66e-15 78.6
Msa1448510 AT3G55050.2 28.713 202 107 5 244 413 130 326 1.66e-15 78.6
Msa1448510 AT5G57050.3 50.000 90 33 3 260 348 231 309 1.71e-15 77.4
Msa1448510 AT2G05050.1 38.144 97 54 1 332 422 91 187 3.23e-15 74.3
Msa1448510 AT5G59220.2 51.136 88 31 3 260 346 221 297 3.28e-15 76.6
Msa1448510 AT2G40860.3 37.013 154 72 6 234 372 452 595 5.30e-15 77.8
Msa1448510 AT5G26010.1 35.065 154 82 4 249 390 135 282 8.29e-15 75.9
Msa1448510 AT3G02750.2 32.178 202 107 6 260 442 216 406 1.08e-14 76.6
Msa1448510 AT3G02750.1 32.178 202 107 6 260 442 216 406 1.08e-14 76.6
Msa1448510 AT5G66080.1 27.053 207 114 5 239 413 123 324 1.29e-14 75.5
Msa1448510 AT5G66080.2 27.053 207 114 5 239 413 19 220 1.63e-14 74.3
Msa1448510 AT1G72770.2 49.425 87 32 3 260 345 326 401 3.52e-14 74.3
Msa1448510 AT1G72770.5 49.425 87 32 3 260 345 326 401 3.52e-14 74.3
Msa1448510 AT3G51370.2 26.570 207 115 6 239 413 35 236 4.18e-14 73.2
Msa1448510 AT3G51370.1 26.570 207 115 6 239 413 120 321 5.01e-14 73.9
Msa1448510 AT3G51370.3 26.570 207 115 6 239 413 120 321 5.01e-14 73.9
Msa1448510 AT3G12620.2 25.962 208 117 5 234 409 119 321 6.11e-14 73.6
Msa1448510 AT3G12620.1 25.962 208 117 5 234 409 119 321 6.11e-14 73.6
Msa1448510 AT5G36250.2 28.636 220 112 7 260 446 207 414 6.54e-14 73.9
Msa1448510 AT3G17090.2 30.357 168 86 3 249 390 142 304 1.07e-13 72.4
Msa1448510 AT4G38520.2 27.049 244 122 7 234 425 117 356 1.30e-13 72.8
Msa1448510 AT4G38520.1 27.049 244 122 7 234 425 117 356 1.30e-13 72.8
Msa1448510 AT5G02760.1 25.105 239 121 6 239 425 113 345 4.89e-13 70.9
Msa1448510 AT3G27140.1 29.167 192 84 4 260 442 61 209 5.97e-13 68.9
Msa1448510 AT4G27800.3 30.168 179 79 6 247 392 147 312 1.36e-12 68.9
Msa1448510 AT4G27800.2 30.168 179 79 6 247 392 147 312 1.47e-12 68.9
Msa1448510 AT1G47380.1 27.363 201 124 6 246 433 111 302 1.61e-12 69.3
Msa1448510 AT1G03590.1 32.867 143 78 4 260 390 185 321 1.89e-12 69.3
Msa1448510 AT1G68410.4 29.469 207 118 8 248 436 122 318 3.60e-12 68.6
Msa1448510 AT1G68410.3 29.469 207 118 8 248 436 122 318 3.60e-12 68.6
Msa1448510 AT1G68410.1 29.469 207 118 8 248 436 122 318 3.60e-12 68.6
Msa1448510 AT1G68410.2 29.469 207 118 8 248 436 122 318 3.60e-12 68.6
Msa1448510 AT1G09160.2 29.670 182 103 7 256 422 124 295 7.49e-12 67.4
Msa1448510 AT1G09160.1 29.670 182 103 7 256 422 124 295 7.49e-12 67.4
Msa1448510 AT4G33920.2 24.364 275 141 8 239 448 19 291 1.18e-11 65.9
Msa1448510 AT4G33920.3 25.403 248 124 7 260 448 16 261 1.62e-11 65.1
Msa1448510 AT4G03415.1 32.168 143 79 4 260 390 195 331 1.63e-11 66.6
Msa1448510 AT4G03415.3 32.168 143 79 4 260 390 195 331 1.63e-11 66.6
Msa1448510 AT4G03415.2 32.168 143 79 4 260 390 195 331 1.63e-11 66.6
Msa1448510 AT4G33920.1 24.364 275 141 8 239 448 102 374 2.19e-11 65.9
Msa1448510 AT4G32950.2 35.878 131 66 4 260 378 139 263 4.12e-11 63.9

Find 109 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTATTGTGATCATTTA+TGG 0.053137 tig0032218:-27554 Msa1448510:three_prime_UTR
GTTTGCTATAAATAAGTTTA+TGG 0.168904 tig0032218:-27501 Msa1448510:three_prime_UTR
GCATCTTGATAACTGAATTT+TGG 0.186147 tig0032218:+33653 Msa1448510:intergenic
GCTCTTTCTAAAACTTATTA+TGG 0.205589 tig0032218:-27525 Msa1448510:three_prime_UTR
TCAAGGATCACCTGGATTTC+AGG 0.221623 tig0032218:+29571 Msa1448510:intergenic
CTGTGGGTATTCAAGCTTTA+GGG 0.229516 tig0032218:-32225 Msa1448510:CDS
AAACACACTTATAGCCAATT+TGG 0.238676 tig0032218:+31063 Msa1448510:intergenic
GGCCGTTCAGTGTGCTTATT+TGG 0.250467 tig0032218:-32149 Msa1448510:CDS
TTTGTTTGAATCTACTAAAA+TGG 0.257355 tig0032218:+33705 Msa1448510:intergenic
GCTGTGGGTATTCAAGCTTT+AGG 0.283523 tig0032218:-32226 Msa1448510:CDS
TACTGCTTCAACCGCTGTTT+TGG 0.298247 tig0032218:-30756 Msa1448510:CDS
TCAGGTACTTGGAGGGTTGG+AGG 0.316866 tig0032218:-29655 Msa1448510:intron
TTATCTGCTGGTCAGGTACT+TGG 0.318306 tig0032218:-29666 Msa1448510:intron
TTCCGCTCATCACTTCTATT+AGG 0.319364 tig0032218:+30260 Msa1448510:intergenic
CTAGCTGTACTAGCTTTATC+AGG 0.329502 tig0032218:+27738 Msa1448510:intergenic
GAGGATGATTCTGCTCGTTC+TGG 0.338595 tig0032218:-33176 Msa1448510:CDS
GTGTATGATTCTAGGGTAGA+TGG 0.345251 tig0032218:-33411 Msa1448510:intron
CTATTTCATTCAAGGGGTCT+AGG 0.354349 tig0032218:-30920 Msa1448510:CDS
CGTCTTTATGTTGCTAATGT+TGG 0.369537 tig0032218:-30725 Msa1448510:CDS
AGGGGTCTAGGGTTGGTTCA+TGG 0.373370 tig0032218:-30908 Msa1448510:CDS
CTAGACCCCTTGAATGAAAT+AGG 0.374141 tig0032218:+30921 Msa1448510:intergenic
TTCTTGCAAGTGATGGACTC+TGG 0.377103 tig0032218:-28375 Msa1448510:CDS
TTCTCTCGCACGCGCGGAAG+AGG 0.379452 tig0032218:-27874 Msa1448510:CDS
ATTAACTTAAGTAACCTTGC+AGG 0.385220 tig0032218:-30848 Msa1448510:CDS
CTAGCAATGTCCCGTGCATT+TGG 0.388360 tig0032218:-29628 Msa1448510:CDS
TCAGGTTCTGCTACAACAAA+TGG 0.406761 tig0032218:+29589 Msa1448510:intergenic
TCGCGCTGCTGAGTATTTGA+AGG 0.414937 tig0032218:-31134 Msa1448510:CDS
CGGAAGAGAATTGAGAATGC+TGG 0.418557 tig0032218:-30242 Msa1448510:CDS
TGCTTATTTGGAATATTTGA+TGG 0.436479 tig0032218:-32137 Msa1448510:intron
CAGTTTCTTCATCTATCTCC+TGG 0.443845 tig0032218:+28407 Msa1448510:intergenic
TGTTAGTCCTATTTCATTCA+AGG 0.445734 tig0032218:-30928 Msa1448510:CDS
GTTAGTCCTATTTCATTCAA+GGG 0.446364 tig0032218:-30927 Msa1448510:CDS
ACAATAAATGCATACTCAAA+TGG 0.447235 tig0032218:+30950 Msa1448510:intergenic
AGGTACTTGGAGGGTTGGAG+GGG 0.452329 tig0032218:-29653 Msa1448510:CDS
TCTGCTGGTCAGGTACTTGG+AGG 0.462237 tig0032218:-29663 Msa1448510:intron
ATTAAGACATCAACCATTGA+TGG 0.465203 tig0032218:-32170 Msa1448510:CDS
GTGCTTGTTCTTGCAAGTGA+TGG 0.466824 tig0032218:-28382 Msa1448510:CDS
TGTTGCCATTCAATTACGTT+CGG 0.467610 tig0032218:-33346 Msa1448510:CDS
GGCAGCTGCTCGTAAGTTAA+CGG 0.470980 tig0032218:-27844 Msa1448510:CDS
TATTTCATTCAAGGGGTCTA+GGG 0.472109 tig0032218:-30919 Msa1448510:CDS
CAGGTACTTGGAGGGTTGGA+GGG 0.476854 tig0032218:-29654 Msa1448510:CDS
GACAAGAACGTATAAACAAA+TGG 0.481541 tig0032218:+30992 Msa1448510:intergenic
GAGCAGAATCATCCTCTTTG+TGG 0.485689 tig0032218:+33183 Msa1448510:intergenic
TCATTCAAGGGGTCTAGGGT+TGG 0.498128 tig0032218:-30915 Msa1448510:CDS
GGAAGAGAATTGAGAATGCT+GGG 0.498423 tig0032218:-30241 Msa1448510:CDS
ATTCGAAACACGAGATTAAG+AGG 0.504443 tig0032218:+33547 Msa1448510:intergenic
CAACAAATGGCTTCAGCATA+CGG 0.504649 tig0032218:+29602 Msa1448510:intergenic
GGCTTGTAGAGGCTCCAGTT+TGG 0.506243 tig0032218:-27480 Msa1448510:three_prime_UTR
TCTTGCAAGTGATGGACTCT+GGG 0.506521 tig0032218:-28374 Msa1448510:CDS
GCACACTGAACGGCCATCAA+TGG 0.510832 tig0032218:+32157 Msa1448510:intergenic
AGCAGAATCATCCTCTTTGT+GGG 0.511509 tig0032218:+33184 Msa1448510:intergenic
TGAGAATGAGATGAGGGTGG+AGG 0.514850 tig0032218:+33738 Msa1448510:intergenic
ATTGAATGGCAACAATCTCT+TGG 0.515224 tig0032218:+33355 Msa1448510:intergenic
GGTTCTATGTCAACAAGGGC+TGG 0.523229 tig0032218:-33230 Msa1448510:CDS
ATAGGGATGATGGTTGATAC+AGG 0.529679 tig0032218:-33251 Msa1448510:CDS
GAATAAGTACATAGGGATGA+TGG 0.530731 tig0032218:-33261 Msa1448510:CDS
TGTAGCAGAACCTGAAATCC+AGG 0.531929 tig0032218:-29581 Msa1448510:intron
TCTCTCGCACGCGCGGAAGA+GGG 0.531984 tig0032218:-27873 Msa1448510:CDS
TGCTGTTTCTCTCGCACGCG+CGG 0.535097 tig0032218:-27880 Msa1448510:CDS
GCTGATATGTTTCACCTGCA+AGG 0.538951 tig0032218:+30834 Msa1448510:intergenic
ATGAGATGAGAATGAGATGA+GGG 0.542105 tig0032218:+33732 Msa1448510:intergenic
TTCCTCCGAACGTAATTGAA+TGG 0.542928 tig0032218:+33341 Msa1448510:intergenic
AAAGATAATTTCCGGGATGA+CGG 0.544350 tig0032218:-30782 Msa1448510:CDS
TTGTGTGCTTGATTTATTGA+GGG 0.544963 tig0032218:-27663 Msa1448510:three_prime_UTR
ATTGTGTGCTTGATTTATTG+AGG 0.552318 tig0032218:-27664 Msa1448510:intron
CTGTTATATCAAAAGCCAAA+AGG 0.552980 tig0032218:-30691 Msa1448510:intron
TTGTTACTGGTGGATGCAAG+AGG 0.557429 tig0032218:-33151 Msa1448510:intron
TTAGTCCTATTTCATTCAAG+GGG 0.558305 tig0032218:-30926 Msa1448510:CDS
CTGCTGGTCAGGTACTTGGA+GGG 0.558808 tig0032218:-29662 Msa1448510:intron
GTGTTTAAGAATAAGTACAT+AGG 0.559274 tig0032218:-33269 Msa1448510:CDS
TGTTTAAGAATAAGTACATA+GGG 0.560733 tig0032218:-33268 Msa1448510:CDS
CTGGGATGTAGTACAGAATG+AGG 0.561731 tig0032218:-28356 Msa1448510:intron
GAGTGACTTACATTACAAAA+CGG 0.573171 tig0032218:+27575 Msa1448510:intergenic
AATAAGTTTATGGCTTGTAG+AGG 0.583008 tig0032218:-27491 Msa1448510:three_prime_UTR
AACAAGGGCTGGACCCTCTG+TGG 0.584711 tig0032218:-33219 Msa1448510:CDS
AAGCAGTAGAACCGTCATCC+CGG 0.586100 tig0032218:+30771 Msa1448510:intergenic
TGGTCAGGTACTTGGAGGGT+TGG 0.587206 tig0032218:-29658 Msa1448510:intron
AGATGAGAATGAGATGAGGG+TGG 0.595369 tig0032218:+33735 Msa1448510:intergenic
AGATAACATTACTTGTATTG+TGG 0.598689 tig0032218:-27796 Msa1448510:CDS
CTTGTCAAATCTGACATCAT+CGG 0.601544 tig0032218:-30975 Msa1448510:CDS
TGCCATTCAATTACGTTCGG+AGG 0.605951 tig0032218:-33343 Msa1448510:CDS
CATACGGTTGCCAAATGCAC+GGG 0.607533 tig0032218:+29618 Msa1448510:intergenic
GCATACGGTTGCCAAATGCA+CGG 0.608451 tig0032218:+29617 Msa1448510:intergenic
TTCCAAATAAGCACACTGAA+CGG 0.610019 tig0032218:+32147 Msa1448510:intergenic
TGTGGGTATTCAAGCTTTAG+GGG 0.620144 tig0032218:-32224 Msa1448510:CDS
ACGCGCGGAAGAGGGAGCTG+AGG 0.624807 tig0032218:-27865 Msa1448510:CDS
AAGGGCTGGACCCTCTGTGG+AGG 0.633314 tig0032218:-33216 Msa1448510:CDS
AATATCATAGAAATCCTCCA+TGG 0.634352 tig0032218:+32190 Msa1448510:intergenic
CAACATTAGCAACATAAAGA+CGG 0.638225 tig0032218:+30726 Msa1448510:intergenic
AAGAGTCTGCACATGCATGA+TGG 0.638768 tig0032218:-27640 Msa1448510:three_prime_UTR
GAAGAGAATTGAGAATGCTG+GGG 0.645480 tig0032218:-30240 Msa1448510:CDS
GTGGGTATTCAAGCTTTAGG+GGG 0.647356 tig0032218:-32223 Msa1448510:CDS
GATGAGATGAGAATGAGATG+AGG 0.647967 tig0032218:+33731 Msa1448510:intergenic
GAAGATGAAAGACTTAGCTG+TGG 0.649418 tig0032218:-32242 Msa1448510:CDS
ATACAGGTTCTATGTCAACA+AGG 0.649790 tig0032218:-33235 Msa1448510:CDS
AAGATGAAAGACTTAGCTGT+GGG 0.649895 tig0032218:-32241 Msa1448510:CDS
TAATTGCGAAAGAAATGTGA+AGG 0.649934 tig0032218:+33613 Msa1448510:intergenic
AGGTGAAACATATCAGCAGA+CGG 0.662640 tig0032218:-30828 Msa1448510:CDS
GGATACTGTGTCCCACAAAG+AGG 0.664416 tig0032218:-33195 Msa1448510:CDS
ATTCTAGGGTAGATGGTATG+CGG 0.672838 tig0032218:-33404 Msa1448510:intron
ATATTCCATGCAGGTCATGG+TGG 0.673781 tig0032218:-31160 Msa1448510:intron
GGAGATAGATGAAGAAACTG+AGG 0.679288 tig0032218:-28404 Msa1448510:CDS
AACCTAATAGAAGTGATGAG+CGG 0.688453 tig0032218:-30262 Msa1448510:CDS
TACAGGTTCTATGTCAACAA+GGG 0.688710 tig0032218:-33234 Msa1448510:CDS
GACACAGTATCCTCCACAGA+GGG 0.693531 tig0032218:+33206 Msa1448510:intergenic
AAGAGAATTGAGAATGCTGG+GGG 0.703336 tig0032218:-30239 Msa1448510:CDS
GGGGAAGAGAGTGACCATGG+AGG 0.741569 tig0032218:-32204 Msa1448510:CDS
ACGGTTATCAACCAAAACAG+CGG 0.747863 tig0032218:+30745 Msa1448500:intergenic
GGACACAGTATCCTCCACAG+AGG 0.792073 tig0032218:+33205 Msa1448500:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTACTTGATTATTTTAAATA+TGG - tig0032218:28104-28123 Msa1448510:intron 10.0%
!!! TTTACATTAGATTTTTATAT+TGG - tig0032218:28221-28240 Msa1448510:intron 10.0%
!!! TTACATTAGATTTTTATATT+GGG - tig0032218:28222-28241 Msa1448510:intron 10.0%
!! TTTGTAATTAAAAGTAAAAT+AGG - tig0032218:31805-31824 Msa1448510:intron 10.0%
!!! AGTTGTATATAATTTTTTAT+CGG - tig0032218:32143-32162 Msa1448510:CDS 10.0%
!!! TGTTGTATATAATTTTTTAT+TGG - tig0032218:32178-32197 Msa1448510:CDS 10.0%
!! ATAAAAAAAAGTTAATTTCA+GGG - tig0032218:32358-32377 Msa1448510:intron 10.0%
!! ATATATTAAAATGGCTTATA+AGG - tig0032218:28255-28274 Msa1448510:intron 15.0%
!! ATAGTAATCTTAAAAATTCA+TGG - tig0032218:29204-29223 Msa1448510:intron 15.0%
!!! TTATTGTTTTGATTTTTCTT+TGG + tig0032218:29495-29514 Msa1448510:intergenic 15.0%
!! ATGTAATTTGATTAAGAAAT+GGG - tig0032218:31487-31506 Msa1448510:intron 15.0%
!!! GTTGTATATAATTTTTTATC+GGG - tig0032218:32144-32163 Msa1448510:CDS 15.0%
!! TTGAAAATTCATTAATTTCA+CGG + tig0032218:32248-32267 Msa1448510:intergenic 15.0%
!! GATAAAAAAAAGTTAATTTC+AGG - tig0032218:32357-32376 Msa1448510:intron 15.0%
!! ATTTAATCCCTAATATAATA+GGG + tig0032218:32425-32444 Msa1448510:intergenic 15.0%
!! TATTTAATCCCTAATATAAT+AGG + tig0032218:32426-32445 Msa1448510:intergenic 15.0%
!! TCATTAGTAACAAATATAAT+TGG - tig0032218:32956-32975 Msa1448510:intron 15.0%
!!! AAGAAAAAACACATTTTATT+TGG + tig0032218:33199-33218 Msa1448510:intergenic 15.0%
!! TTTGTTTGAATCTACTAAAA+TGG + tig0032218:27508-27527 None:intergenic 20.0%
!! AATGCGAAAATTAATAAGAT+CGG + tig0032218:27733-27752 None:intergenic 20.0%
!!! TAATTTTTGTGTATGATTCT+AGG - tig0032218:27791-27810 Msa1448510:CDS 20.0%
!!! AATTTTTGTGTATGATTCTA+GGG - tig0032218:27792-27811 Msa1448510:CDS 20.0%
!! TGTTTAAGAATAAGTACATA+GGG - tig0032218:27942-27961 Msa1448510:intron 20.0%
!! CGAACTGATATATATTAAAA+TGG - tig0032218:28246-28265 Msa1448510:intron 20.0%
!! TCGAAAAAAAAAAATCTTAC+AGG + tig0032218:28452-28471 Msa1448510:intergenic 20.0%
!!! AGAATCAATTTTGCAATTAT+TGG - tig0032218:28473-28492 Msa1448510:intron 20.0%
!!! AATTTTGCAATTATTGGTTT+TGG - tig0032218:28479-28498 Msa1448510:intron 20.0%
!!! AGGATTTTTTTTAACACATA+TGG - tig0032218:28555-28574 Msa1448510:intron 20.0%
!!! GGATTTTTTTTAACACATAT+GGG - tig0032218:28556-28575 Msa1448510:intron 20.0%
!!! GATTTTTTTTAACACATATG+GGG - tig0032218:28557-28576 Msa1448510:intron 20.0%
!!! AAACAGTTTTAGTTTAAATG+AGG - tig0032218:28719-28738 Msa1448510:intron 20.0%
!! TACTAAAATATCACTACTAT+TGG + tig0032218:28833-28852 Msa1448510:intergenic 20.0%
!!! ATAGTAGTGATATTTTAGTA+AGG - tig0032218:28833-28852 Msa1448510:intron 20.0%
!!! TAGTAGTGATATTTTAGTAA+GGG - tig0032218:28834-28853 Msa1448510:intron 20.0%
!! TTGTTTACGTATATTACTAA+TGG - tig0032218:29266-29285 Msa1448510:intron 20.0%
!!! GCAACTTATTATTTAGTTTT+TGG - tig0032218:29288-29307 Msa1448510:intron 20.0%
!!! GTAATCTAAATATTACCTTT+TGG + tig0032218:30537-30556 Msa1448510:intergenic 20.0%
!! TGAAGAAATCAAAATATAGT+AGG + tig0032218:30559-30578 Msa1448510:intergenic 20.0%
!!! TATTATTGAGGATATGTTTT+TGG - tig0032218:31055-31074 Msa1448510:CDS 20.0%
!! GATGTAATTTGATTAAGAAA+TGG - tig0032218:31486-31505 Msa1448510:intron 20.0%
!! AGATTGCATAACTTTAATTA+AGG + tig0032218:31677-31696 Msa1448510:intergenic 20.0%
!! CAATCTATTATTTGATTGTA+TGG - tig0032218:31691-31710 Msa1448510:intron 20.0%
!! AAGTACTTATAAATATAGTG+TGG - tig0032218:31840-31859 Msa1448510:intron 20.0%
!! AGTACTTATAAATATAGTGT+GGG - tig0032218:31841-31860 Msa1448510:intron 20.0%
!!! ATATAATTTTTTATCGGGTA+AGG - tig0032218:32149-32168 Msa1448510:CDS 20.0%
!! CTATAGTTTCAATGTTAAAA+CGG + tig0032218:32208-32227 Msa1448510:intergenic 20.0%
!!! ATAATGGATATACAATTACA+TGG + tig0032218:32277-32296 Msa1448510:intergenic 20.0%
!!! AACAGTTTCAAATACATTTT+TGG - tig0032218:32525-32544 Msa1448510:intron 20.0%
!!! TTATTTCCTCATATATTTTC+AGG - tig0032218:32779-32798 Msa1448510:intron 20.0%
!!! TTCATCTTCATTTAAAGTAT+TGG + tig0032218:33102-33121 Msa1448510:intergenic 20.0%
!!! GTTTGCTATAAATAAGTTTA+TGG - tig0032218:33709-33728 Msa1448510:five_prime_UTR 20.0%
! GTGTTTAAGAATAAGTACAT+AGG - tig0032218:27941-27960 Msa1448510:intron 25.0%
! AAAATGGCTTATAAGGTTAT+TGG - tig0032218:28262-28281 Msa1448510:intron 25.0%
! CTAAATTTACAATGACCAAA+TGG + tig0032218:28366-28385 Msa1448510:intergenic 25.0%
! CATTTGGTCATTGTAAATTT+AGG - tig0032218:28364-28383 Msa1448510:CDS 25.0%
!! TAAATTTAGGATCGAAGTAT+TGG - tig0032218:28377-28396 Msa1448510:CDS 25.0%
!! GAAATATCTGTTTTCTTCTT+GGG - tig0032218:28501-28520 Msa1448510:intron 25.0%
!! AAATATCTGTTTTCTTCTTG+GGG - tig0032218:28502-28521 Msa1448510:intron 25.0%
! TAATACAAATCAGTTTGGTA+AGG + tig0032218:28670-28689 Msa1448510:intergenic 25.0%
!!! GTTGATAATACAAATCAGTT+TGG + tig0032218:28675-28694 Msa1448510:intergenic 25.0%
! ATTATCAACTTACCAAATGA+CGG - tig0032218:28686-28705 Msa1448510:intron 25.0%
!! TATGTCGCTGAATTTTTAAT+TGG - tig0032218:28941-28960 Msa1448510:intron 25.0%
!! TGCTTATTTGGAATATTTGA+TGG - tig0032218:29073-29092 Msa1448510:intron 25.0%
! GACTCATGAAAAAATAAGAT+TGG - tig0032218:29226-29245 Msa1448510:intron 25.0%
! AAAAAATAAGATTGGACAAC+TGG - tig0032218:29234-29253 Msa1448510:intron 25.0%
!!! TTCCTATTTTTTCTTTGCTT+GGG + tig0032218:29315-29334 Msa1448510:intergenic 25.0%
!!! TTTCCTATTTTTTCTTTGCT+TGG + tig0032218:29316-29335 Msa1448510:intergenic 25.0%
! GAAAATAAGATATGAGAAGA+GGG + tig0032218:29768-29787 Msa1448510:intergenic 25.0%
!!! ATTTTCCATTTTTCAATGCA+CGG - tig0032218:29782-29801 Msa1448510:intron 25.0%
! TTTATTTGTCTACAGTGAAA+TGG - tig0032218:29880-29899 Msa1448510:intron 25.0%
! TTATTTGTCTACAGTGAAAT+GGG - tig0032218:29881-29900 Msa1448510:intron 25.0%
!!! TATTTTAGCTTAACGAAACT+AGG - tig0032218:29911-29930 Msa1448510:intron 25.0%
!!! ATTTTAGCTTAACGAAACTA+GGG - tig0032218:29912-29931 Msa1448510:intron 25.0%
! ACAATAAATGCATACTCAAA+TGG + tig0032218:30263-30282 Msa1448510:intergenic 25.0%
!! ACTCTGAAAAAGATAATTTC+CGG - tig0032218:30420-30439 Msa1448510:intron 25.0%
!!! ATGAGTTCGTTTTTATGAAA+AGG + tig0032218:30667-30686 Msa1448510:intergenic 25.0%
!! TTCACATTATAAGTTTTCTC+TGG + tig0032218:30705-30724 Msa1448510:intergenic 25.0%
! TAACTACATAAGATATCACT+TGG - tig0032218:30752-30771 Msa1448510:CDS 25.0%
! TCTAGATTGTTCTATTATTG+AGG - tig0032218:31043-31062 Msa1448510:CDS 25.0%
! GATGTGTATCAATTTATCAT+TGG - tig0032218:31118-31137 Msa1448510:CDS 25.0%
!!! AAGTTTTTTGATGATGACAT+CGG - tig0032218:31157-31176 Msa1448510:intron 25.0%
! TACAAAGTAACAATGAGAAT+AGG - tig0032218:31351-31370 Msa1448510:intron 25.0%
! AACTTTAATTAAGGTACACA+AGG + tig0032218:31668-31687 Msa1448510:intergenic 25.0%
! GTACTTATAAATATAGTGTG+GGG - tig0032218:31842-31861 Msa1448510:intron 25.0%
!!! CGTTTTAACATTGAAACTAT+AGG - tig0032218:32206-32225 Msa1448510:CDS 25.0%
! AACATTGAAACTATAGGAAT+TGG - tig0032218:32212-32231 Msa1448510:CDS 25.0%
! ACTATAGGAATTGGTTAATT+CGG - tig0032218:32221-32240 Msa1448510:CDS 25.0%
!! AGTTTGAAATTTCGCAATAT+CGG - tig0032218:32384-32403 Msa1448510:intron 25.0%
! ATAATAGGGATCAGTTAATT+TGG + tig0032218:32411-32430 Msa1448510:intergenic 25.0%
! TAACTGATCCCTATTATATT+AGG - tig0032218:32414-32433 Msa1448510:intron 25.0%
! AACTGATCCCTATTATATTA+GGG - tig0032218:32415-32434 Msa1448510:intron 25.0%
!!! TTTTGAAGTTCTCGTAAATA+TGG + tig0032218:32488-32507 Msa1448510:intergenic 25.0%
!!! ATTTGTTTTCTTGCTAAAGT+GGG + tig0032218:32621-32640 Msa1448510:intergenic 25.0%
!!! TATTTGTTTTCTTGCTAAAG+TGG + tig0032218:32622-32641 Msa1448510:intergenic 25.0%
! AATCGTTAAATATTACATGG+GGG + tig0032218:33079-33098 Msa1448510:intergenic 25.0%
! GAATCGTTAAATATTACATG+GGG + tig0032218:33080-33099 Msa1448510:intergenic 25.0%
! GGAATCGTTAAATATTACAT+GGG + tig0032218:33081-33100 Msa1448510:intergenic 25.0%
! TGGAATCGTTAAATATTACA+TGG + tig0032218:33082-33101 Msa1448510:intergenic 25.0%
! ACACAATAAATTGAGGTTAA+TGG + tig0032218:33148-33167 Msa1448510:intergenic 25.0%
! TTAACCTCAATTTATTGTGT+CGG - tig0032218:33148-33167 Msa1448510:intron 25.0%
! AGAGAAAAATAAACACAACA+TGG + tig0032218:33261-33280 Msa1448510:intergenic 25.0%
!!! GTTGTGTTTATTTTTCTCTT+TGG - tig0032218:33262-33281 Msa1448510:CDS 25.0%
! AGATAACATTACTTGTATTG+TGG - tig0032218:33414-33433 Msa1448510:intron 25.0%
! TCTTGTATTGTGATCATTTA+TGG - tig0032218:33656-33675 Msa1448510:five_prime_UTR 25.0%
!!! GCTCTTTCTAAAACTTATTA+TGG - tig0032218:33685-33704 Msa1448510:five_prime_UTR 25.0%
! ACAAAACAAAAATACCAAAC+TGG + tig0032218:33747-33766 Msa1448510:intergenic 25.0%
!! GCATCTTGATAACTGAATTT+TGG + tig0032218:27560-27579 None:intergenic 30.0%
TAATTGCGAAAGAAATGTGA+AGG + tig0032218:27600-27619 None:intergenic 30.0%
!! AGCTTTATCTCTTTTCGATA+TGG - tig0032218:28310-28329 Msa1448510:intron 30.0%
! GGAAATATCTGTTTTCTTCT+TGG - tig0032218:28500-28519 Msa1448510:intron 30.0%
AACACATATGGGGTTAAAAA+TGG - tig0032218:28567-28586 Msa1448510:intron 30.0%
TTATCAACTTACCAAATGAC+GGG - tig0032218:28687-28706 Msa1448510:intron 30.0%
!! ATTTTAGTAAGGGCTTATAG+TGG - tig0032218:28844-28863 Msa1448510:intron 30.0%
TACTTGATCGCAATATAGAT+AGG + tig0032218:28916-28935 Msa1448510:intergenic 30.0%
AATATCATAGAAATCCTCCA+TGG + tig0032218:29023-29042 Msa1448510:intergenic 30.0%
ATTAAGACATCAACCATTGA+TGG - tig0032218:29040-29059 Msa1448510:intron 30.0%
!! TTAAATCTTTCTAGTTCTCC+AGG - tig0032218:29128-29147 Msa1448510:intron 30.0%
! CATTTTTCATATGAAATGCC+TGG + tig0032218:29149-29168 Msa1448510:intergenic 30.0%
!!! TCCTATTTTTTCTTTGCTTG+GGG + tig0032218:29314-29333 Msa1448510:intergenic 30.0%
TATTAAATGCTATGCACACT+TGG + tig0032218:29351-29370 Msa1448510:intergenic 30.0%
GTATAACTCACAAACTGTTT+CGG + tig0032218:29379-29398 Msa1448510:intergenic 30.0%
TTGTGAGTTATACATGTTTG+TGG - tig0032218:29386-29405 Msa1448510:intron 30.0%
! TTTCTTTGGAAGATCAACAT+AGG + tig0032218:29481-29500 Msa1448510:intergenic 30.0%
! AGAAAGATCAAAACTGATTC+AGG + tig0032218:29552-29571 Msa1448510:intergenic 30.0%
! ACATTTTGTTGAAAGCTCAT+GGG + tig0032218:29645-29664 Msa1448510:intergenic 30.0%
! TACATTTTGTTGAAAGCTCA+TGG + tig0032218:29646-29665 Msa1448510:intergenic 30.0%
GGAAAATAAGATATGAGAAG+AGG + tig0032218:29769-29788 Msa1448510:intergenic 30.0%
CTAACATTGCAAATATTCGA+AGG - tig0032218:29811-29830 Msa1448510:intron 30.0%
TAGGGAAGAAAATATGACAT+TGG - tig0032218:29930-29949 Msa1448510:intron 30.0%
AGATATATCAATGACCACAA+AGG - tig0032218:29985-30004 Msa1448510:intron 30.0%
AACTCGTTTAGAAATTCTCA+AGG + tig0032218:30026-30045 Msa1448510:intergenic 30.0%
! GAGTTTTTAATATTCCATGC+AGG - tig0032218:30041-30060 Msa1448510:intron 30.0%
TTGGTATCTGTCAAAAACTT+CGG + tig0032218:30131-30150 Msa1448510:intergenic 30.0%
! GTTTTTGACAGATACCAAAT+TGG - tig0032218:30133-30152 Msa1448510:intron 30.0%
AAACACACTTATAGCCAATT+TGG + tig0032218:30150-30169 Msa1448510:intergenic 30.0%
GACAAGAACGTATAAACAAA+TGG + tig0032218:30221-30240 Msa1448510:intergenic 30.0%
TGTTAGTCCTATTTCATTCA+AGG - tig0032218:30282-30301 Msa1448510:CDS 30.0%
GTTAGTCCTATTTCATTCAA+GGG - tig0032218:30283-30302 Msa1448510:CDS 30.0%
TTAGTCCTATTTCATTCAAG+GGG - tig0032218:30284-30303 Msa1448510:CDS 30.0%
!! TCATTTTTCAGTCTGTTATG+TGG - tig0032218:30333-30352 Msa1448510:intron 30.0%
ATTAACTTAAGTAACCTTGC+AGG - tig0032218:30362-30381 Msa1448510:intron 30.0%
! CTCTGAAAAAGATAATTTCC+GGG - tig0032218:30421-30440 Msa1448510:intron 30.0%
CAACATTAGCAACATAAAGA+CGG + tig0032218:30487-30506 Msa1448510:intergenic 30.0%
CTGTTATATCAAAAGCCAAA+AGG - tig0032218:30519-30538 Msa1448510:intron 30.0%
! GTCTAGCTCACTAATAATAT+TGG - tig0032218:30592-30611 Msa1448510:intron 30.0%
CTCACTAATAATATTGGTAG+TGG - tig0032218:30598-30617 Msa1448510:intron 30.0%
! AAAGCATTTCTAACAAGACA+AGG - tig0032218:30780-30799 Msa1448510:CDS 30.0%
AAGCATTTCTAACAAGACAA+GGG - tig0032218:30781-30800 Msa1448510:CDS 30.0%
! CATTTTGTGCAAGATACAAT+GGG - tig0032218:31080-31099 Msa1448510:CDS 30.0%
! ATTTTGTGCAAGATACAATG+GGG - tig0032218:31081-31100 Msa1448510:CDS 30.0%
! ATGCATGAAGTATTATCTTC+TGG - tig0032218:31212-31231 Msa1448510:intron 30.0%
!!! CAATGCAGTTTACACTTTTT+TGG + tig0032218:31276-31295 Msa1448510:intergenic 30.0%
CTTAATCAAATTACATCCCT+TGG + tig0032218:31483-31502 Msa1448510:intergenic 30.0%
CATTATCTACATTCACTGTT+AGG + tig0032218:31756-31775 Msa1448510:intergenic 30.0%
! TGTATGGGTTATTCAGTATT+AGG - tig0032218:31975-31994 Msa1448510:intron 30.0%
TAGTTTCAATGTTAAAACGG+TGG + tig0032218:32205-32224 Msa1448510:intergenic 30.0%
AGAAAAGACTAGTACGATAA+TGG + tig0032218:32293-32312 Msa1448510:intergenic 30.0%
GTCCTTCAAATTATCCTAAA+TGG - tig0032218:32326-32345 Msa1448510:intron 30.0%
! GTCCATTTAGGATAATTTGA+AGG + tig0032218:32331-32350 Msa1448510:intergenic 30.0%
TTTATCACATGAGTCCATTT+AGG + tig0032218:32343-32362 Msa1448510:intergenic 30.0%
!!! CTAGTTTTTTTAGATCCATG+TGG - tig0032218:32455-32474 Msa1448510:intron 30.0%
AAATATGGACAAAATCCACA+TGG + tig0032218:32473-32492 Msa1448510:intergenic 30.0%
!! TTTGTTTTCTTGCTAAAGTG+GGG + tig0032218:32620-32639 Msa1448510:intergenic 30.0%
ATGATGTGGATAACCTTAAA+GGG - tig0032218:32691-32710 Msa1448510:intron 30.0%
TTGCTTTCACATACATAATC+AGG - tig0032218:32913-32932 Msa1448510:intron 30.0%
ATGAAGATGTATATTTCAGC+TGG - tig0032218:33005-33024 Msa1448510:intron 30.0%
!! GTTCTAAAAGTGTGAAAACT+CGG + tig0032218:33038-33057 Msa1448510:intergenic 30.0%
AGATAAGTACTCAACATTCT+TGG - tig0032218:33121-33140 Msa1448510:intron 30.0%
! AATTTATTGTGTCGGCAAAA+CGG - tig0032218:33156-33175 Msa1448510:CDS 30.0%
!!! TTATTTTTCTCTTTGGTGCT+CGG - tig0032218:33269-33288 Msa1448510:CDS 30.0%
ATTGTGTGCTTGATTTATTG+AGG - tig0032218:33546-33565 Msa1448510:five_prime_UTR 30.0%
TTGTGTGCTTGATTTATTGA+GGG - tig0032218:33547-33566 Msa1448510:five_prime_UTR 30.0%
GAGTGACTTACATTACAAAA+CGG + tig0032218:33638-33657 Msa1448510:intergenic 30.0%
! AATAAGTTTATGGCTTGTAG+AGG - tig0032218:33719-33738 Msa1448510:five_prime_UTR 30.0%
ATGAGATGAGAATGAGATGA+GGG + tig0032218:27481-27500 None:intergenic 35.0%
ATTCGAAACACGAGATTAAG+AGG + tig0032218:27666-27685 None:intergenic 35.0%
ATTGAATGGCAACAATCTCT+TGG + tig0032218:27858-27877 Msa1448510:intergenic 35.0%
TGTTGCCATTCAATTACGTT+CGG - tig0032218:27864-27883 Msa1448510:CDS 35.0%
GAATAAGTACATAGGGATGA+TGG - tig0032218:27949-27968 Msa1448510:intron 35.0%
ATACAGGTTCTATGTCAACA+AGG - tig0032218:27975-27994 Msa1448510:intron 35.0%
TACAGGTTCTATGTCAACAA+GGG - tig0032218:27976-27995 Msa1448510:intron 35.0%
AACACGCTACTTAACTATCT+CGG + tig0032218:28190-28209 Msa1448510:intergenic 35.0%
GCAACATTTACATCTCCATT+TGG - tig0032218:28348-28367 Msa1448510:intron 35.0%
ACATATGGGGTTAAAAATGG+AGG - tig0032218:28570-28589 Msa1448510:intron 35.0%
CATATGGGGTTAAAAATGGA+GGG - tig0032218:28571-28590 Msa1448510:intron 35.0%
ATATGGGGTTAAAAATGGAG+GGG - tig0032218:28572-28591 Msa1448510:intron 35.0%
AAAAATGGAGGGGTTATTCA+TGG - tig0032218:28582-28601 Msa1448510:intron 35.0%
GGAGGGAAGTAAAAAAAACA+TGG + tig0032218:28649-28668 Msa1448510:intergenic 35.0%
ACAAATCAGTTTGGTAAGGA+GGG + tig0032218:28666-28685 Msa1448510:intergenic 35.0%
TACAAATCAGTTTGGTAAGG+AGG + tig0032218:28667-28686 Msa1448510:intergenic 35.0%
AAGATGAAAGACTTAGCTGT+GGG - tig0032218:28969-28988 Msa1448510:intron 35.0%
TTCCAAATAAGCACACTGAA+CGG + tig0032218:29066-29085 Msa1448510:intergenic 35.0%
! TAAAGCAAGCTTTTCTGCTT+AGG + tig0032218:29440-29459 Msa1448510:intergenic 35.0%
ACAGAAGCTTCATAAAGACA+GGG + tig0032218:29583-29602 Msa1448510:intergenic 35.0%
TACAGAAGCTTCATAAAGAC+AGG + tig0032218:29584-29603 Msa1448510:intergenic 35.0%
! CATTTTGTTGAAAGCTCATG+GGG + tig0032218:29644-29663 Msa1448510:intergenic 35.0%
GTTGCGAAAATTGCTAAATC+TGG - tig0032218:29687-29706 Msa1448510:intron 35.0%
TGGAACTTAATTCAAGAAGC+AGG + tig0032218:29731-29750 Msa1448510:intergenic 35.0%
! ATATGACATTGGCTGCTATT+TGG - tig0032218:29941-29960 Msa1448510:intron 35.0%
! TATGACATTGGCTGCTATTT+GGG - tig0032218:29942-29961 Msa1448510:intron 35.0%
TTAATATTCCATGCAGGTCA+TGG - tig0032218:30047-30066 Msa1448510:intron 35.0%
CTTGTCAAATCTGACATCAT+CGG - tig0032218:30235-30254 Msa1448510:CDS 35.0%
TATTTCATTCAAGGGGTCTA+GGG - tig0032218:30291-30310 Msa1448510:CDS 35.0%
AAAGATAATTTCCGGGATGA+CGG - tig0032218:30428-30447 Msa1448510:intron 35.0%
CGTCTTTATGTTGCTAATGT+TGG - tig0032218:30485-30504 Msa1448510:intron 35.0%
AACCTAATAGAAGTGATGAG+CGG - tig0032218:30948-30967 Msa1448510:CDS 35.0%
! GCATTTTGTGCAAGATACAA+TGG - tig0032218:31079-31098 Msa1448510:CDS 35.0%
TTTATCATTGGTCGAAGATG+AGG - tig0032218:31130-31149 Msa1448510:CDS 35.0%
AATTCCAAGGCAGAGATATA+TGG + tig0032218:31450-31469 Msa1448510:intergenic 35.0%
ATCAAATTACATCCCTTGGA+TGG + tig0032218:31479-31498 Msa1448510:intergenic 35.0%
ATTCACTTGTGTTTATCTGC+TGG - tig0032218:31532-31551 Msa1448510:intron 35.0%
TAAGGTACACAAGGTAATCA+AGG + tig0032218:31659-31678 Msa1448510:intergenic 35.0%
CTACATTCACTGTTAGGATT+TGG + tig0032218:31750-31769 Msa1448510:intergenic 35.0%
ATAAATATAGTGTGGGGTTG+AGG - tig0032218:31848-31867 Msa1448510:intron 35.0%
! GACTTGAGAATTTTGCAACT+TGG - tig0032218:31870-31889 Msa1448510:intron 35.0%
TTATCACAGCTAATGAGAGT+AGG - tig0032218:31928-31947 Msa1448510:intron 35.0%
TATCACAGCTAATGAGAGTA+GGG - tig0032218:31929-31948 Msa1448510:intron 35.0%
AATAACCCATACATGACTAG+CGG + tig0032218:31968-31987 Msa1448510:intergenic 35.0%
!!! ATTTTTTATCGGGTAAGGCT+TGG - tig0032218:32154-32173 Msa1448510:CDS 35.0%
AATCTCACTTCCTATACTAG+GGG + tig0032218:32560-32579 Msa1448510:intergenic 35.0%
CAATCTCACTTCCTATACTA+GGG + tig0032218:32561-32580 Msa1448510:intergenic 35.0%
TCAATCTCACTTCCTATACT+AGG + tig0032218:32562-32581 Msa1448510:intergenic 35.0%
!!! TTTTCCATTGATGATGCAGA+AGG - tig0032218:32651-32670 Msa1448510:intron 35.0%
CATCATGGAAAGCTAAGTTA+AGG + tig0032218:32677-32696 Msa1448510:intergenic 35.0%
! TAACTTAGCTTTCCATGATG+TGG - tig0032218:32677-32696 Msa1448510:intron 35.0%
!! CTTTAAGGTTATCCACATCA+TGG + tig0032218:32692-32711 Msa1448510:intergenic 35.0%
CATGATGTGGATAACCTTAA+AGG - tig0032218:32690-32709 Msa1448510:intron 35.0%
AGTACAGAATGAGGTAAGAT+CGG - tig0032218:32863-32882 Msa1448510:intron 35.0%
TTTCACATACATAATCAGGC+AGG - tig0032218:32917-32936 Msa1448510:intron 35.0%
AAGATGTATATTTCAGCTGG+TGG - tig0032218:33008-33027 Msa1448510:intron 35.0%
TTTGCCGACACAATAAATTG+AGG + tig0032218:33155-33174 Msa1448510:intergenic 35.0%
!!! TATTTTTCTCTTTGGTGCTC+GGG - tig0032218:33270-33289 Msa1448510:CDS 35.0%
GATGAGATGAGAATGAGATG+AGG + tig0032218:27482-27501 None:intergenic 40.0%
!! GTGTATGATTCTAGGGTAGA+TGG - tig0032218:27799-27818 Msa1448510:CDS 40.0%
!! ATTCTAGGGTAGATGGTATG+CGG - tig0032218:27806-27825 Msa1448510:CDS 40.0%
TTCCTCCGAACGTAATTGAA+TGG + tig0032218:27872-27891 Msa1448510:intergenic 40.0%
! ATAGGGATGATGGTTGATAC+AGG - tig0032218:27959-27978 Msa1448510:intron 40.0%
AGCAGAATCATCCTCTTTGT+GGG + tig0032218:28029-28048 Msa1448510:intergenic 40.0%
!! TCTGCTTGCTATGTTTGTTG+AGG - tig0032218:28135-28154 Msa1448510:intron 40.0%
TCTTTAATGTTGCGCGTGTT+TGG - tig0032218:28416-28435 Msa1448510:intron 40.0%
CTTTAATGTTGCGCGTGTTT+GGG - tig0032218:28417-28436 Msa1448510:intron 40.0%
CTTCTTGGGGTTCTTATCTT+TGG - tig0032218:28515-28534 Msa1448510:intron 40.0%
! GGTTCTTATCTTTGGAGGTT+TGG - tig0032218:28523-28542 Msa1448510:intron 40.0%
!! TGGAGGTTTGGTTATTTCTG+AGG - tig0032218:28535-28554 Msa1448510:intron 40.0%
! TACCAAATGACGGGAGTTAA+TGG - tig0032218:28696-28715 Msa1448510:intron 40.0%
TTCCATTAACTCCCGTCATT+TGG + tig0032218:28701-28720 Msa1448510:intergenic 40.0%
! TGTATCCGACTTGATCTAGT+GGG + tig0032218:28779-28798 Msa1448510:intergenic 40.0%
! ATGTATCCGACTTGATCTAG+TGG + tig0032218:28780-28799 Msa1448510:intergenic 40.0%
! AAGGGCTTATAGTGGAAGAA+TGG - tig0032218:28852-28871 Msa1448510:intron 40.0%
! ATAGTGGAAGAATGGTTGTG+TGG - tig0032218:28860-28879 Msa1448510:intron 40.0%
GAAGATGAAAGACTTAGCTG+TGG - tig0032218:28968-28987 Msa1448510:intron 40.0%
CTGTGGGTATTCAAGCTTTA+GGG - tig0032218:28985-29004 Msa1448510:intron 40.0%
! TGTGGGTATTCAAGCTTTAG+GGG - tig0032218:28986-29005 Msa1448510:intron 40.0%
TAACATTCTAGCAAGCAACG+AGG + tig0032218:29111-29130 Msa1448510:intergenic 40.0%
GCCCCAAGCAAAGAAAAAAT+AGG - tig0032218:29310-29329 Msa1448510:intron 40.0%
! ATGACATTGGCTGCTATTTG+GGG - tig0032218:29943-29962 Msa1448510:intron 40.0%
AATTCTCAAGGCAACAGAAC+AGG + tig0032218:30014-30033 Msa1448510:intergenic 40.0%
CTAGACCCCTTGAATGAAAT+AGG + tig0032218:30292-30311 Msa1448510:intergenic 40.0%
CTATTTCATTCAAGGGGTCT+AGG - tig0032218:30290-30309 Msa1448510:CDS 40.0%
AGGTGAAACATATCAGCAGA+CGG - tig0032218:30382-30401 Msa1448510:intron 40.0%
ACGGTTATCAACCAAAACAG+CGG + tig0032218:30468-30487 Msa1448510:intergenic 40.0%
TTCCGCTCATCACTTCTATT+AGG + tig0032218:30953-30972 Msa1448510:intergenic 40.0%
GGAAGAGAATTGAGAATGCT+GGG - tig0032218:30969-30988 Msa1448510:CDS 40.0%
GAAGAGAATTGAGAATGCTG+GGG - tig0032218:30970-30989 Msa1448510:CDS 40.0%
AAGAGAATTGAGAATGCTGG+GGG - tig0032218:30971-30990 Msa1448510:CDS 40.0%
TGGATGGACAGAAAATTCCA+AGG + tig0032218:31463-31482 Msa1448510:intergenic 40.0%
! TGGAATTTTCTGTCCATCCA+AGG - tig0032218:31463-31482 Msa1448510:intron 40.0%
! GGAATTTTCTGTCCATCCAA+GGG - tig0032218:31464-31483 Msa1448510:intron 40.0%
CAACAAATGGCTTCAGCATA+CGG + tig0032218:31611-31630 Msa1448510:intergenic 40.0%
TCAGGTTCTGCTACAACAAA+TGG + tig0032218:31624-31643 Msa1448510:intergenic 40.0%
AGAAGTGACAAGTGAGAGAA+AGG - tig0032218:31894-31913 Msa1448510:intron 40.0%
ATCACAGCTAATGAGAGTAG+GGG - tig0032218:31930-31949 Msa1448510:intron 40.0%
ATCAACTTCTGGCCATTTGT+CGG + tig0032218:32028-32047 Msa1448510:intergenic 40.0%
! ACAAATGGCCAGAAGTTGAT+AGG - tig0032218:32028-32047 Msa1448510:intron 40.0%
TGAACAAGCCTATCAACTTC+TGG + tig0032218:32039-32058 Msa1448510:intergenic 40.0%
! TTTTCTTGCTAAAGTGGGGA+GGG + tig0032218:32616-32635 Msa1448510:intergenic 40.0%
ACACAGATGATGTCCCTTTA+AGG + tig0032218:32707-32726 Msa1448510:intergenic 40.0%
CCTGGTCCTGAAAATATATG+AGG + tig0032218:32788-32807 Msa1448510:intergenic 40.0%
!! CCTCATATATTTTCAGGACC+AGG - tig0032218:32785-32804 Msa1448510:intron 40.0%
CAGTTTCTTCATCTATCTCC+TGG + tig0032218:32806-32825 Msa1448510:intergenic 40.0%
GGAGATAGATGAAGAAACTG+AGG - tig0032218:32806-32825 Msa1448510:intron 40.0%
TGAAAGCAACAAGCAATGCA+GGG + tig0032218:32902-32921 Msa1448510:intergenic 40.0%
GGGGAATTGACAATAGGATT+AGG + tig0032218:33060-33079 Msa1448510:intergenic 40.0%
TACATGGGGGAATTGACAAT+AGG + tig0032218:33066-33085 Msa1448510:intergenic 40.0%
AGAAACAGCATCCTGATCAA+AGG + tig0032218:33320-33339 Msa1448510:intergenic 40.0%
!! CTAGCTGTACTAGCTTTATC+AGG + tig0032218:33475-33494 Msa1448510:intergenic 40.0%
AGATGAGAATGAGATGAGGG+TGG + tig0032218:27478-27497 None:intergenic 45.0%
!!! TGCGGAATTTTGATTCGAGC+TGG - tig0032218:27824-27843 Msa1448510:CDS 45.0%
TGCCATTCAATTACGTTCGG+AGG - tig0032218:27867-27886 Msa1448510:CDS 45.0%
GAGCAGAATCATCCTCTTTG+TGG + tig0032218:28030-28049 Msa1448510:intergenic 45.0%
!!! GCTCGTTCTGGTTTTGTTAC+TGG - tig0032218:28046-28065 Msa1448510:intron 45.0%
!!! CGTTCTGGTTTTGTTACTGG+TGG - tig0032218:28049-28068 Msa1448510:intron 45.0%
! TTGTTACTGGTGGATGCAAG+AGG - tig0032218:28059-28078 Msa1448510:intron 45.0%
ATCTCGGCAACAAAGATGAG+AGG + tig0032218:28174-28193 Msa1448510:intergenic 45.0%
!! AGGATCGAAGTATTGGCTGT+TGG - tig0032218:28384-28403 Msa1448510:CDS 45.0%
!! GGATCGAAGTATTGGCTGTT+GGG - tig0032218:28385-28404 Msa1448510:CDS 45.0%
!! GATCGAAGTATTGGCTGTTG+GGG - tig0032218:28386-28405 Msa1448510:CDS 45.0%
!! ATCGAAGTATTGGCTGTTGG+GGG - tig0032218:28387-28406 Msa1448510:CDS 45.0%
CTTGGGGTTCTTATCTTTGG+AGG - tig0032218:28518-28537 Msa1448510:intron 45.0%
GCTGTGGGTATTCAAGCTTT+AGG - tig0032218:28984-29003 Msa1448510:intron 45.0%
!! GTGGGTATTCAAGCTTTAGG+GGG - tig0032218:28987-29006 Msa1448510:intron 45.0%
GGTTGTATGTCATGTTCCTG+TGG - tig0032218:29407-29426 Msa1448510:intron 45.0%
CTGCTTAGGATTTACACCAC+AGG + tig0032218:29426-29445 Msa1448510:intergenic 45.0%
TTCAAGAAGCAGGCATGTCA+GGG + tig0032218:29721-29740 Msa1448510:intergenic 45.0%
ATTCAAGAAGCAGGCATGTC+AGG + tig0032218:29722-29741 Msa1448510:intergenic 45.0%
CCTTGCCGTGCATTGAAAAA+TGG + tig0032218:29790-29809 Msa1448510:intergenic 45.0%
!! CCATTTTTCAATGCACGGCA+AGG - tig0032218:29787-29806 Msa1448510:intron 45.0%
AACAGAACAGGTGACCTTTG+TGG + tig0032218:30002-30021 Msa1448510:intergenic 45.0%
ATATTCCATGCAGGTCATGG+TGG - tig0032218:30050-30069 Msa1448510:intron 45.0%
GCTGATATGTTTCACCTGCA+AGG + tig0032218:30379-30398 Msa1448510:intergenic 45.0%
! TACTGCTTCAACCGCTGTTT+TGG - tig0032218:30454-30473 Msa1448510:intron 45.0%
CGGAAGAGAATTGAGAATGC+TGG - tig0032218:30968-30987 Msa1448510:CDS 45.0%
TGTGCAAGATACAATGGGGT+TGG - tig0032218:31085-31104 Msa1448510:CDS 45.0%
GATGACATCGGAAGTTTGTG+CGG - tig0032218:31169-31188 Msa1448510:intron 45.0%
ATGACATCGGAAGTTTGTGC+GGG - tig0032218:31170-31189 Msa1448510:intron 45.0%
TGCTCCATATATCTCTGCCT+TGG - tig0032218:31443-31462 Msa1448510:intron 45.0%
CTTGTGTTTATCTGCTGGTC+AGG - tig0032218:31537-31556 Msa1448510:intron 45.0%
TTATCTGCTGGTCAGGTACT+TGG - tig0032218:31544-31563 Msa1448510:intron 45.0%
TGTAGCAGAACCTGAAATCC+AGG - tig0032218:31629-31648 Msa1448510:intron 45.0%
TCAAGGATCACCTGGATTTC+AGG + tig0032218:31642-31661 Msa1448510:intergenic 45.0%
CAAGGTAATCAAGGATCACC+TGG + tig0032218:31650-31669 Msa1448510:intergenic 45.0%
! AATGTGCCGCTAGTCATGTA+TGG - tig0032218:31959-31978 Msa1448510:intron 45.0%
! ATGTGCCGCTAGTCATGTAT+GGG - tig0032218:31960-31979 Msa1448510:intron 45.0%
ACCAAAAGACCACCGACAAA+TGG - tig0032218:32013-32032 Msa1448510:intron 45.0%
TAGATCATACACGCATGTGC+TGG + tig0032218:32084-32103 Msa1448510:intergenic 45.0%
ACTTCCTATACTAGGGGACA+TGG + tig0032218:32554-32573 Msa1448510:intergenic 45.0%
! GTTTTCTTGCTAAAGTGGGG+AGG + tig0032218:32617-32636 Msa1448510:intergenic 45.0%
AAGGCCTTCTGCATCATCAA+TGG + tig0032218:32658-32677 Msa1448510:intergenic 45.0%
GTGCTTGTTCTTGCAAGTGA+TGG - tig0032218:32828-32847 Msa1448510:intron 45.0%
!! TTCTTGCAAGTGATGGACTC+TGG - tig0032218:32835-32854 Msa1448510:intron 45.0%
!! TCTTGCAAGTGATGGACTCT+GGG - tig0032218:32836-32855 Msa1448510:intron 45.0%
CTGGGATGTAGTACAGAATG+AGG - tig0032218:32854-32873 Msa1448510:intron 45.0%
GTGAAAGCAACAAGCAATGC+AGG + tig0032218:32903-32922 Msa1448510:intergenic 45.0%
TCCTTACTTCTGTGCTAGAG+CGG - tig0032218:33218-33237 Msa1448510:CDS 45.0%
CACTTTGCCATCCTTTGATC+AGG - tig0032218:33306-33325 Msa1448510:CDS 45.0%
ACAGCATCCTGATCAAAGGA+TGG + tig0032218:33316-33335 Msa1448510:intergenic 45.0%
!!! ACGGAAGCTGCTTTTAATCG+TGG - tig0032218:33385-33404 Msa1448510:CDS 45.0%
AAGAGTCTGCACATGCATGA+TGG - tig0032218:33570-33589 Msa1448510:five_prime_UTR 45.0%
TGAGAATGAGATGAGGGTGG+AGG + tig0032218:27475-27494 None:intergenic 50.0%
GGTTCTATGTCAACAAGGGC+TGG - tig0032218:27980-27999 Msa1448510:intron 50.0%
GACACAGTATCCTCCACAGA+GGG + tig0032218:28007-28026 Msa1448510:intergenic 50.0%
GGATACTGTGTCCCACAAAG+AGG - tig0032218:28015-28034 Msa1448510:intron 50.0%
GAGGATGATTCTGCTCGTTC+TGG - tig0032218:28034-28053 Msa1448510:intron 50.0%
TGATCTAGTGGGAAGGGCTA+TGG + tig0032218:28768-28787 Msa1448510:intergenic 50.0%
! CCGACTTGATCTAGTGGGAA+GGG + tig0032218:28774-28793 Msa1448510:intergenic 50.0%
CCCTTCCCACTAGATCAAGT+CGG - tig0032218:28771-28790 Msa1448510:intron 50.0%
! TCCGACTTGATCTAGTGGGA+AGG + tig0032218:28775-28794 Msa1448510:intergenic 50.0%
GGCCGTTCAGTGTGCTTATT+TGG - tig0032218:29061-29080 Msa1448510:intron 50.0%
ATTCTAGCAAGCAACGAGGC+TGG + tig0032218:29107-29126 Msa1448510:intergenic 50.0%
!! AGAAGAGGGCGTTGAGGATT+TGG + tig0032218:29754-29773 Msa1448510:intergenic 50.0%
!! GATATGAGAAGAGGGCGTTG+AGG + tig0032218:29760-29779 Msa1448510:intergenic 50.0%
TCGCGCTGCTGAGTATTTGA+AGG - tig0032218:30076-30095 Msa1448510:intron 50.0%
! TCATTCAAGGGGTCTAGGGT+TGG - tig0032218:30295-30314 Msa1448510:CDS 50.0%
AAGCAGTAGAACCGTCATCC+CGG + tig0032218:30442-30461 Msa1448510:intergenic 50.0%
GGTTTCCTTGCCTGCTCTTT+GGG - tig0032218:30802-30821 Msa1448510:CDS 50.0%
AAGAACCCAAAGAGCAGGCA+AGG + tig0032218:30810-30829 Msa1448510:intergenic 50.0%
AACGCAAGAACCCAAAGAGC+AGG + tig0032218:30815-30834 Msa1448510:intergenic 50.0%
TGTCATGTGGGCAGGTAACT+TGG - tig0032218:30997-31016 Msa1448510:CDS 50.0%
CTAGCAATGTCCCGTGCATT+TGG - tig0032218:31582-31601 Msa1448510:intron 50.0%
CATACGGTTGCCAAATGCAC+GGG + tig0032218:31595-31614 Msa1448510:intergenic 50.0%
GCATACGGTTGCCAAATGCA+CGG + tig0032218:31596-31615 Msa1448510:intergenic 50.0%
! GCCATTTGTCGGTGGTCTTT+TGG + tig0032218:32017-32036 Msa1448510:intergenic 50.0%
AACTTCTGGCCATTTGTCGG+TGG + tig0032218:32025-32044 Msa1448510:intergenic 50.0%
GAACTGGAGCGATAGCGATT+TGG + tig0032218:32062-32081 Msa1448510:intergenic 50.0%
ATACACGCATGTGCTGGAAC+TGG + tig0032218:32078-32097 Msa1448510:intergenic 50.0%
GAAGCCATGTCCCCTAGTAT+AGG - tig0032218:32547-32566 Msa1448510:intron 50.0%
TCCGCTCTAGCACAGAAGTA+AGG + tig0032218:33222-33241 Msa1448510:intergenic 50.0%
GGCAGCTGCTCGTAAGTTAA+CGG - tig0032218:33366-33385 Msa1448510:CDS 50.0%
GGACACAGTATCCTCCACAG+AGG + tig0032218:28008-28027 Msa1448510:intergenic 55.0%
TAGGGGGAAGAGAGTGACCA+TGG - tig0032218:29003-29022 Msa1448510:intron 55.0%
GCACACTGAACGGCCATCAA+TGG + tig0032218:29056-29075 Msa1448510:intergenic 55.0%
!! AGAGGGCGTTGAGGATTTGG+TGG + tig0032218:29751-29770 Msa1448510:intergenic 55.0%
GAGAACCACCATGACCTGCA+TGG + tig0032218:30058-30077 Msa1448510:intergenic 55.0%
!! AGGGGTCTAGGGTTGGTTCA+TGG - tig0032218:30302-30321 Msa1448510:CDS 55.0%
GGGTTTCCTTGCCTGCTCTT+TGG - tig0032218:30801-30820 Msa1448510:CDS 55.0%
!! ATGCTGGGGGTGTTGTCATG+TGG - tig0032218:30984-31003 Msa1448510:CDS 55.0%
!! TGCTGGGGGTGTTGTCATGT+GGG - tig0032218:30985-31004 Msa1448510:CDS 55.0%
TCTGCTGGTCAGGTACTTGG+AGG - tig0032218:31547-31566 Msa1448510:intron 55.0%
CTGCTGGTCAGGTACTTGGA+GGG - tig0032218:31548-31567 Msa1448510:intron 55.0%
TGGTCAGGTACTTGGAGGGT+TGG - tig0032218:31552-31571 Msa1448510:intron 55.0%
TCAGGTACTTGGAGGGTTGG+AGG - tig0032218:31555-31574 Msa1448510:intron 55.0%
CAGGTACTTGGAGGGTTGGA+GGG - tig0032218:31556-31575 Msa1448510:intron 55.0%
AGGTACTTGGAGGGTTGGAG+GGG - tig0032218:31557-31576 Msa1448510:intron 55.0%
CAAGCAATGCAGGGCTGAGA+AGG + tig0032218:32893-32912 Msa1448510:intergenic 55.0%
GGCTTGTAGAGGCTCCAGTT+TGG - tig0032218:33730-33749 Msa1448510:five_prime_UTR 55.0%
AACAAGGGCTGGACCCTCTG+TGG - tig0032218:27991-28010 Msa1448510:intron 60.0%
!! GTATTGGCTGTTGGGGGTCG+TGG - tig0032218:28393-28412 Msa1448510:CDS 60.0%
GGGGAAGAGAGTGACCATGG+AGG - tig0032218:29006-29025 Msa1448510:intron 60.0%
!! TGCTGTTTCTCTCGCACGCG+CGG - tig0032218:33330-33349 Msa1448510:CDS 60.0%
AAGGGCTGGACCCTCTGTGG+AGG - tig0032218:27994-28013 Msa1448510:intron 65.0%
!! GGGGGTGTTGTCATGTGGGC+AGG - tig0032218:30989-31008 Msa1448510:CDS 65.0%
TTCTCTCGCACGCGCGGAAG+AGG - tig0032218:33336-33355 Msa1448510:CDS 65.0%
TCTCTCGCACGCGCGGAAGA+GGG - tig0032218:33337-33356 Msa1448510:CDS 65.0%
ACGCGCGGAAGAGGGAGCTG+AGG - tig0032218:33345-33364 Msa1448510:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0032218 gene 27428 33804 27428 ID=Msa1448510;Name=Msa1448510
tig0032218 mRNA 27428 33804 27428 ID=Msa1448510-mRNA-1;Parent=Msa1448510;Name=Msa1448510-mRNA-1;_AED=0.06;_eAED=0.06;_QI=289|0.87|0.88|1|0.75|0.44|9|263|448
tig0032218 exon 27428 27682 27428 ID=Msa1448510-mRNA-1:exon:16423;Parent=Msa1448510-mRNA-1
tig0032218 exon 27705 27904 27705 ID=Msa1448510-mRNA-1:exon:16422;Parent=Msa1448510-mRNA-1
tig0032218 exon 28357 28431 28357 ID=Msa1448510-mRNA-1:exon:16421;Parent=Msa1448510-mRNA-1
tig0032218 exon 29582 29673 29582 ID=Msa1448510-mRNA-1:exon:16420;Parent=Msa1448510-mRNA-1
tig0032218 exon 30222 30340 30222 ID=Msa1448510-mRNA-1:exon:16419;Parent=Msa1448510-mRNA-1
tig0032218 exon 30692 31169 30692 ID=Msa1448510-mRNA-1:exon:16418;Parent=Msa1448510-mRNA-1
tig0032218 exon 32138 32265 32138 ID=Msa1448510-mRNA-1:exon:16417;Parent=Msa1448510-mRNA-1
tig0032218 exon 33152 33419 33152 ID=Msa1448510-mRNA-1:exon:16416;Parent=Msa1448510-mRNA-1
tig0032218 exon 33521 33804 33521 ID=Msa1448510-mRNA-1:exon:16415;Parent=Msa1448510-mRNA-1
tig0032218 five_prime_UTR 33521 33804 33521 ID=Msa1448510-mRNA-1:five_prime_utr;Parent=Msa1448510-mRNA-1
tig0032218 five_prime_UTR 33415 33419 33415 ID=Msa1448510-mRNA-1:five_prime_utr;Parent=Msa1448510-mRNA-1
tig0032218 CDS 33152 33414 33152 ID=Msa1448510-mRNA-1:cds;Parent=Msa1448510-mRNA-1
tig0032218 CDS 32138 32265 32138 ID=Msa1448510-mRNA-1:cds;Parent=Msa1448510-mRNA-1
tig0032218 CDS 30692 31169 30692 ID=Msa1448510-mRNA-1:cds;Parent=Msa1448510-mRNA-1
tig0032218 CDS 30222 30340 30222 ID=Msa1448510-mRNA-1:cds;Parent=Msa1448510-mRNA-1
tig0032218 CDS 29582 29673 29582 ID=Msa1448510-mRNA-1:cds;Parent=Msa1448510-mRNA-1
tig0032218 CDS 28357 28431 28357 ID=Msa1448510-mRNA-1:cds;Parent=Msa1448510-mRNA-1
tig0032218 CDS 27713 27904 27713 ID=Msa1448510-mRNA-1:cds;Parent=Msa1448510-mRNA-1
tig0032218 three_prime_UTR 27705 27712 27705 ID=Msa1448510-mRNA-1:three_prime_utr;Parent=Msa1448510-mRNA-1
tig0032218 three_prime_UTR 27428 27682 27428 ID=Msa1448510-mRNA-1:three_prime_utr;Parent=Msa1448510-mRNA-1
Gene Sequence

>Msa1448510

ATGGTATGCGGAATTTTGATTCGAGCTGGAATTTTGACCAAGAGATTGTTGCCATTCAATTACGTTCGGAGGAAGTGTTTGCAAAGAGTTTTTGTTGTTCATTCACAATTTGTTGCGAATCGCGTGTTTAAGAATAAGTACATAGGGATGATGGTTGATACAGGTTCTATGTCAACAAGGGCTGGACCCTCTGTGGAGGATACTGTGTCCCACAAAGAGGATGATTCTGCTCGTTCTGGTTTTGTTACTGGTGGATGCAAGAGTGAAGATGAAAGACTTAGCTGTGGGTATTCAAGCTTTAGGGGGAAGAGAGTGACCATGGAGGATTTCTATGATATTAAGACATCAACCATTGATGGCCGTTCAGTGTGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGCGCTGCTGAGTATTTGAAGGATCATCTTTTTGAGAATCTCATGAAGCATCCGAAGTTTTTGACAGATACCAAATTGGCTATAAGTGTGTTTGAATTTCACTTATTATTTCTTGTAATATTGAAGACATGTCACTTTTTACCATTTGTTTATACGTTCTTGTCAAATCTGACATCATCGGAACCATTTGAGTATGCATTTATTGTGTTAGTCCTATTTCATTCAAGGGGTCTAGGGTTGGTTCATGGAGTGCTTTTCATTTTTCAGTCTGTTATGTGGATGTTTATTAACTTAAGTAACCTTGCAGGTGAAACATATCAGCAGACGGATGCTGAGTTTTTGAACTCTGAAAAAGATAATTTCCGGGATGACGGTTCTACTGCTTCAACCGCTGTTTTGGTTGATAACCGTCTTTATGTTGCTAATGTTGGAGATTCTAGAACTGTTATATCAAAAGCCAAAAGACGTCTTAAACTTGAGATTTTGTTTTTGACAGCAATTGCTCTCTCTGAAGATCATAAACCTAATAGAAGTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCCCGTGCATTTGGCAACCGTATGCTGAAGCCATTTGTTGTAGCAGAACCTGAAATCCAGGACCAGGAGATAGATGAAGAAACTGAGGTGCTTGTTCTTGCAAGTGATGGACTCTGGGATGTAGTACAGAATGAGGATGCTGTTTCTCTCGCACGCGCGGAAGAGGGAGCTGAGGCAGCTGCTCGTAAGTTAACGGAAGCTGCTTTTAATCGTGGTAGTGCAGATAACATTACTTGTATTGTGGTACGATTCAATCATGAAAAAAGACACGCAGCTAATCCTGATAAAGCTAGTACAGCTAGCAGTCAGCATGAGCAGAGACAATGA
Protein sequence

>Msa1448510

MVCGILIRAGILTKRLLPFNYVRRKCLQRVFVVHSQFVANRVFKNKYIGMMVDTGSMSTRAGPSVEDTVSHKEDDSARSGFVTGGCKSEDERLSCGYSSFRGKRVTMEDFYDIKTSTIDGRSVCLFGIFDGHGGSRAAEYLKDHLFENLMKHPKFLTDTKLAISVFEFHLLFLVILKTCHFLPFVYTFLSNLTSSEPFEYAFIVLVLFHSRGLGLVHGVLFIFQSVMWMFINLSNLAGETYQQTDAEFLNSEKDNFRDDGSTASTAVLVDNRLYVANVGDSRTVISKAKRRLKLEILFLTAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQEIDEETEVLVLASDGLWDVVQNEDAVSLARAEEGAEAAARKLTEAAFNRGSADNITCIVVRFNHEKRHAANPDKASTASSQHEQRQ*