AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0756180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0756180 MtrunA17_Chr5g0401231 96.746 1260 41 0 1 1260 1 1260 0.0 2504
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0756180 AT1G64960.2 50.594 1263 585 9 1 1258 1 1229 0.0 1140
Msa0756180 AT1G64960.1 49.723 1263 567 9 1 1258 1 1200 0.0 1105

Find 244 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCGTTGTCACATTAAATT+TGG 0.118138 5_2:-10240959 Msa0756180:CDS
GGTGGCGGTGGGAGGGGTTT+GGG 0.152093 5_2:+10243476 None:intergenic
GTAAGCATCTTTGTTATAAT+TGG 0.182037 5_2:+10241936 None:intergenic
GCTACAATCAAGGGCCATTT+TGG 0.186330 5_2:+10238555 None:intergenic
GTCGTGTCCTTCATCTATTT+TGG 0.194615 5_2:-10241974 Msa0756180:CDS
ACATAAGTTGTTGCTTTCTT+TGG 0.204410 5_2:-10241035 Msa0756180:CDS
AATTAAATCAAGCAAGTTAT+TGG 0.209359 5_2:+10238746 None:intergenic
GAATGCTTTGCATCTGCTTT+TGG 0.221348 5_2:-10242132 Msa0756180:CDS
AGGGTTTGATTGAATGAATT+AGG 0.240634 5_2:+10243601 None:intergenic
AGAAGTCCTGCCACATTATC+TGG 0.262209 5_2:+10241136 None:intergenic
GTGGCGGTGGGAGGGGTTTG+GGG 0.263891 5_2:+10243477 None:intergenic
TGAAGTTACAATTTCCAAAA+TGG 0.266674 5_2:-10238569 Msa0756180:CDS
AAGTCGATGTTGGAGGCTTA+TGG 0.282924 5_2:-10242892 Msa0756180:CDS
TTCTTGGTTTGTTCACTTGT+TGG 0.284764 5_2:-10238384 Msa0756180:CDS
TTTGTATATTAGAAGGGTTT+TGG 0.286758 5_2:-10242752 Msa0756180:CDS
AGGGGTTGCTTGAACCTCTT+TGG 0.288614 5_2:-10238173 Msa0756180:CDS
TTGGCTGCCTGATGTAGTTT+TGG 0.290932 5_2:-10238661 Msa0756180:CDS
GGGTGGCGGTGGGAGGGGTT+TGG 0.294385 5_2:+10243475 None:intergenic
TTGAATGTCGAGAATTTATC+TGG 0.295429 5_2:+10238477 None:intergenic
GCATGATAATTTGATTGTTT+TGG 0.298824 5_2:-10243277 Msa0756180:CDS
AGATCTAAAGATTGCTTTCC+TGG 0.301662 5_2:+10240763 None:intergenic
AGAAGATGGAAGAAAGTTTC+TGG 0.302676 5_2:-10242992 Msa0756180:CDS
CATAAGTTGTTGCTTTCTTT+GGG 0.303041 5_2:-10241034 Msa0756180:CDS
ATTCCACTCCTTGAATCTTC+TGG 0.303771 5_2:+10242838 None:intergenic
TGTTTCAACTGAATCATGTT+TGG 0.303846 5_2:-10238724 Msa0756180:CDS
CATAGACATATCTCCTGTTT+TGG 0.310009 5_2:-10240663 Msa0756180:CDS
GATTGGCGATCAACATCTTC+AGG 0.310014 5_2:+10241073 None:intergenic
GGTTCTATCCATGCAAGTTC+TGG 0.311947 5_2:-10242784 Msa0756180:CDS
ATCGTTGTCACATTAAATTT+GGG 0.311953 5_2:-10240958 Msa0756180:CDS
AAAATCAAAATTCCACAAAA+AGG 0.312821 5_2:-10239676 Msa0756180:CDS
TCTTGGTTTGTTCACTTGTT+GGG 0.323357 5_2:-10238383 Msa0756180:CDS
CACTGCAGAGAGCACAGTTT+TGG 0.325243 5_2:+10238533 None:intergenic
CGACGGAGGGTGGCGGTGGG+AGG 0.328088 5_2:+10243468 None:intergenic
TTGATCGCCAATCTAAAATT+AGG 0.330348 5_2:-10241063 Msa0756180:CDS
GGTCAAAGCATTCCTGAGTT+TGG 0.330640 5_2:-10241365 Msa0756180:CDS
AGAGCGACGGAGGGTGGCGG+TGG 0.331358 5_2:+10243464 None:intergenic
ACAGCAATTGTTCTAACTTC+TGG 0.331484 5_2:+10242008 None:intergenic
ACTGGGTTCGGTGGTGGTGG+TGG 0.345101 5_2:+10243428 None:intergenic
TCAGCTTGGGAAGGAGCTTT+TGG 0.349604 5_2:-10242947 Msa0756180:CDS
ATCTGATTGGGAACTGGGTT+CGG 0.352496 5_2:+10243416 None:intergenic
GTTTCAACTGAATCATGTTT+GGG 0.353872 5_2:-10238723 Msa0756180:CDS
ATTTGAAACTGTTGTTAAAC+AGG 0.356426 5_2:-10243044 Msa0756180:CDS
AAAGTGGAAGGTTTACTAAC+TGG 0.356693 5_2:-10241214 Msa0756180:CDS
GAGAAATTGATGCATGTAAA+GGG 0.356739 5_2:-10238192 Msa0756180:CDS
GGGTTTGATTGAATGAATTA+GGG 0.357688 5_2:+10243602 None:intergenic
AATTGAGAATGGGTTCTTGC+AGG 0.370908 5_2:-10242818 Msa0756180:CDS
CATAACTTGGAGTCAACAAC+TGG 0.378416 5_2:-10239737 Msa0756180:CDS
ACAGTGTTACAGCTACTAAA+AGG 0.379156 5_2:-10240919 Msa0756180:CDS
AGTCAGTGAACCATGCTATA+TGG 0.381458 5_2:-10241266 Msa0756180:CDS
TAAGGTGCTCTGTCCAAGAC+TGG 0.381805 5_2:-10241808 Msa0756180:CDS
GCTGCATTACACTAGTAAAA+AGG 0.383645 5_2:-10241462 Msa0756180:CDS
CAATGTGGATTCACATAACT+TGG 0.384118 5_2:-10239750 Msa0756180:CDS
CTTATGCAGCAGGGTTGTTA+AGG 0.385515 5_2:+10240988 None:intergenic
ACGGAGGGTGGCGGTGGGAG+GGG 0.386179 5_2:+10243470 None:intergenic
TTCTTGCAGGATTTGATTGA+GGG 0.387600 5_2:-10242805 Msa0756180:CDS
AGGGAGTGAAGAAATGAGAT+TGG 0.390904 5_2:+10243575 None:intergenic
AAGGACTTTGAGCTGGCATT+AGG 0.391101 5_2:-10238351 Msa0756180:CDS
TAAATGTTCACTTCCACTTT+CGG 0.391923 5_2:+10238608 None:intergenic
CTCGACATTCAATAAACTTA+CGG 0.392019 5_2:-10238466 Msa0756180:CDS
CGAGAAGATTGAGGAAGGAT+TGG 0.393330 5_2:+10243520 None:intergenic
ACGTATCATCTATATGAAAC+TGG 0.400632 5_2:-10238150 Msa0756180:CDS
TGACATGATGTTATCTTCTC+TGG 0.402253 5_2:-10238274 Msa0756180:CDS
TACTGCTGTTCTGAAGTTCA+TGG 0.407356 5_2:-10239021 Msa0756180:CDS
GGAACTGGGTTCGGTGGTGG+TGG 0.410008 5_2:+10243425 None:intergenic
AGAGTATAATGGATGCAGTT+GGG 0.410082 5_2:-10238413 Msa0756180:CDS
TTTGTTAGCTTCTGAGCTAC+AGG 0.413385 5_2:+10241541 None:intergenic
CAAAATATTGCACCGGCCAT+TGG 0.415212 5_2:+10241436 None:intergenic
CCACTCTCATGAAGTCCTTA+AGG 0.418852 5_2:-10241826 Msa0756180:CDS
ATTAATCAGAGGACCGTAGA+TGG 0.419354 5_2:-10242721 Msa0756180:CDS
TTGCCGAGCCAGTCATATTT+CGG 0.420764 5_2:-10242675 Msa0756180:CDS
AGCGTCTAAAACTCATCTTA+TGG 0.421060 5_2:-10241392 Msa0756180:CDS
CTGCAGTGAGTAACTCTTTG+AGG 0.421627 5_2:+10241239 None:intergenic
CTTAACAACCCTGCTGCATA+AGG 0.424511 5_2:-10240987 Msa0756180:CDS
TAATCGTGATGACAGGGATT+GGG 0.424973 5_2:-10238298 Msa0756180:CDS
TCAAGGAGTGGAATTGAGAA+TGG 0.425285 5_2:-10242829 Msa0756180:CDS
GGATTGGATTGTGGTGGTGA+TGG 0.425844 5_2:+10243536 None:intergenic
AGCTAGTAATAACGATGAAC+TGG 0.425908 5_2:-10238214 Msa0756180:CDS
TAAAACTCATCTTATGGAAC+TGG 0.430233 5_2:-10241386 Msa0756180:CDS
AGTCGATGTTGGAGGCTTAT+GGG 0.430569 5_2:-10242891 Msa0756180:CDS
ATGCGTTTCGCATCCGAGAA+AGG 0.435129 5_2:-10243340 Msa0756180:CDS
AGGCTATCTCTGACAAATGC+TGG 0.441732 5_2:-10239650 Msa0756180:CDS
GAAATCAACGATTCGCGCTC+CGG 0.444636 5_2:+10243189 None:intergenic
TCATGCAATGCTTGAACTCC+AGG 0.448812 5_2:+10243294 None:intergenic
CGATGCCTCAAAAGAGGATA+AGG 0.452469 5_2:-10242087 Msa0756180:CDS
CAATAAACTTACGGCTATGC+TGG 0.453081 5_2:-10238457 Msa0756180:CDS
CAGAATTGAATTTGAGGAAG+AGG 0.455907 5_2:-10238889 Msa0756180:CDS
AGGGCCATATATGCCAAAAC+AGG 0.456311 5_2:+10240650 None:intergenic
CTCCTCAATGGGCACTATTG+AGG 0.456844 5_2:+10241495 None:intergenic
GTTACTCACTGCAGAGAAAG+TGG 0.458246 5_2:-10241230 Msa0756180:CDS
CCCAGTGCCAAAACTACATC+AGG 0.461018 5_2:+10238654 None:intergenic
CGATTACATGCCTCCTCAAT+GGG 0.461846 5_2:+10241484 None:intergenic
GCGATTACATGCCTCCTCAA+TGG 0.462529 5_2:+10241483 None:intergenic
TCCTCAATGGGCACTATTGA+GGG 0.465738 5_2:+10241496 None:intergenic
TTATATTTGAAAACAGAAGA+TGG 0.467998 5_2:-10243006 Msa0756180:CDS
CGAGCACGTGCTCAACTGCT+TGG 0.468749 5_2:-10239810 Msa0756180:CDS
ATCAGGCAGCCAAGGCTTTG+CGG 0.469242 5_2:+10238671 None:intergenic
ACTTGTTGGGCTAGAACAAA+AGG 0.469593 5_2:-10238370 Msa0756180:CDS
AAGTCAGCATTGAGCATTGT+GGG 0.469732 5_2:-10240697 Msa0756180:CDS
GGAAGAGCGACGGAGGGTGG+CGG 0.470233 5_2:+10243461 None:intergenic
TGAAGAAATGAGATTGGAAG+AGG 0.470796 5_2:+10243581 None:intergenic
AGTTGTTTAATCGTGATGAC+AGG 0.474192 5_2:-10238305 Msa0756180:CDS
TTGTTGCAGCCGCAAAGCCT+TGG 0.475384 5_2:-10238680 Msa0756180:CDS
GTTAGAACAATTGCTGTTGA+GGG 0.477109 5_2:-10242002 Msa0756180:CDS
TTGGGAACTGGGTTCGGTGG+TGG 0.478804 5_2:+10243422 None:intergenic
ATGGATTCGTAGAGAGAGGG+AGG 0.479474 5_2:+10243555 None:intergenic
GTTCTACAACACACCGAAAG+TGG 0.479507 5_2:-10238621 Msa0756180:CDS
GTTCTTGCAGGATTTGATTG+AGG 0.481339 5_2:-10242806 Msa0756180:CDS
TTGGGTTGAGTGATCAGCTT+GGG 0.484657 5_2:-10242960 Msa0756180:CDS
GATAGGCAGCCTTATGCAGC+AGG 0.485936 5_2:+10240978 None:intergenic
TTGAGGCATCGGGATCCTCA+AGG 0.487166 5_2:+10242099 None:intergenic
GGAGAAATTGATGCATGTAA+AGG 0.487328 5_2:-10238193 Msa0756180:CDS
GACGGAGGGTGGCGGTGGGA+GGG 0.487855 5_2:+10243469 None:intergenic
AGCATTAAGTGACCCAGTCT+TGG 0.488311 5_2:+10241795 None:intergenic
GTCTTGGACAGAGCACCTTA+AGG 0.488423 5_2:+10241811 None:intergenic
ATGATGTATGCAACGAGGTA+AGG 0.489515 5_2:-10241890 Msa0756180:CDS
AACGATCTCGATAGAACAAA+AGG 0.490167 5_2:+10243156 None:intergenic
GTAAGGCTTTCTACGTTGAA+TGG 0.490296 5_2:-10241873 Msa0756180:CDS
TGCAGTGAGTAACTCTTTGA+GGG 0.493044 5_2:+10241240 None:intergenic
ATCTTTGTTATAATTGGTGA+CGG 0.493361 5_2:+10241942 None:intergenic
TCATCACAGAATTGAATTTG+AGG 0.499129 5_2:-10238895 Msa0756180:CDS
GCTGAATGCAGATCAGATAG+AGG 0.504242 5_2:-10241326 Msa0756180:CDS
AGTTAGAACAATTGCTGTTG+AGG 0.504585 5_2:-10242003 Msa0756180:CDS
AAGAGTATAATGGATGCAGT+TGG 0.504894 5_2:-10238414 Msa0756180:CDS
GGTGATGGATTCGTAGAGAG+AGG 0.505660 5_2:+10243551 None:intergenic
GCGGGAAGAGCGACGGAGGG+TGG 0.510893 5_2:+10243458 None:intergenic
AGTCATATTTCGGTCTCTGC+AGG 0.512308 5_2:-10242665 Msa0756180:intron
GGGATATATTGTTTCGAGCA+TGG 0.517339 5_2:-10242870 Msa0756180:CDS
TTAATCGTGATGACAGGGAT+TGG 0.517973 5_2:-10238299 Msa0756180:CDS
CAAGGAGTGGAATTGAGAAT+GGG 0.519108 5_2:-10242828 Msa0756180:CDS
TGCTTCAGCATGAGGATACC+AGG 0.519304 5_2:-10240781 Msa0756180:CDS
AACATCGACTTCCGTCCATA+CGG 0.522970 5_2:+10242904 None:intergenic
TTAATCAGAGGACCGTAGAT+GGG 0.523203 5_2:-10242720 Msa0756180:CDS
CAATTCTGTGATGATACAGC+TGG 0.524071 5_2:+10238904 None:intergenic
TGTTGGATTCGAGAAGATTG+AGG 0.525046 5_2:+10243511 None:intergenic
AAGTGGAAGGTTTACTAACT+GGG 0.525292 5_2:-10241213 Msa0756180:CDS
AAGACTGGGTCACTTAATGC+TGG 0.526089 5_2:-10241793 Msa0756180:CDS
AATGTGATACTGACTGATTC+CGG 0.528013 5_2:-10238807 Msa0756180:CDS
TTCTTCTACATTACTTTCAG+AGG 0.530469 5_2:-10240546 Msa0756180:intron
CAACCGTCATTTGCAGAGCA+AGG 0.531075 5_2:+10240630 None:intergenic
GTCATCACGATTAAACAACT+TGG 0.532544 5_2:+10238308 None:intergenic
AAGCTGTGCCAGAAGATTCA+AGG 0.532592 5_2:-10242846 Msa0756180:CDS
GAAAAGAATGGTGATTCCAA+GGG 0.533003 5_2:-10240587 Msa0756180:CDS
GGATTCGAGAAGATTGAGGA+AGG 0.534853 5_2:+10243515 None:intergenic
TGAGGCATCGGGATCCTCAA+GGG 0.535755 5_2:+10242100 None:intergenic
GAGTATAATGGATGCAGTTG+GGG 0.538063 5_2:-10238412 Msa0756180:CDS
AAGTTGTTGCTTTCTTTGGG+AGG 0.538403 5_2:-10241031 Msa0756180:CDS
CCTCACAGTACAAGTTGCTA+TGG 0.538986 5_2:-10241763 Msa0756180:CDS
CAAGTTATTGGCAAGAGTGA+AGG 0.539764 5_2:+10238758 None:intergenic
TGCAAGTATGCCATCTCGGA+AGG 0.539958 5_2:-10241415 Msa0756180:CDS
GTATGGACGGAAGTCGATGT+TGG 0.540415 5_2:-10242902 Msa0756180:CDS
CAAAAGTTCCAGAACTTGCA+TGG 0.542061 5_2:+10242776 None:intergenic
ATGGTGGAAGGAGAATTTAC+CGG 0.542800 5_2:-10243208 Msa0756180:CDS
GATGATTATTTAGTAGCTGT+AGG 0.545384 5_2:-10240827 Msa0756180:CDS
GAAGAAATGAGATTGGAAGA+GGG 0.546308 5_2:+10243582 None:intergenic
CTTAAGGACTTCATGAGAGT+GGG 0.547100 5_2:+10241827 None:intergenic
AATCGTGATGACAGGGATTG+GGG 0.550245 5_2:-10238297 Msa0756180:CDS
AAATTTAATGTGACAACGAT+AGG 0.550315 5_2:+10240961 None:intergenic
ACCTCGACAAGTGCTTTGTA+AGG 0.550428 5_2:-10239054 Msa0756180:CDS
TAGAGACTTGCTTCAGCATG+AGG 0.551742 5_2:-10240789 Msa0756180:CDS
ATTCGTTCGCAGATTCCGTA+TGG 0.553384 5_2:-10242919 Msa0756180:CDS
TTGAGACTATATGTGAAGAA+TGG 0.555953 5_2:-10243227 Msa0756180:CDS
TGAAAAGAATGGTGATTCCA+AGG 0.558871 5_2:-10240588 Msa0756180:CDS
TTTAGACGCTCCTTCCGAGA+TGG 0.560520 5_2:+10241405 None:intergenic
CACTGTTTGTCCAGATAATG+TGG 0.561270 5_2:-10241146 Msa0756180:CDS
TAGTTTCTCAACCCCATCTA+CGG 0.562850 5_2:+10242708 None:intergenic
GTGATGGATTCGTAGAGAGA+GGG 0.563564 5_2:+10243552 None:intergenic
GAGCGACGGAGGGTGGCGGT+GGG 0.564784 5_2:+10243465 None:intergenic
TAATTTCCCAAAATAGATGA+AGG 0.566722 5_2:+10241967 None:intergenic
AGACCGAAATATGACTGGCT+CGG 0.567968 5_2:+10242672 None:intergenic
TCCCTCAATAGTGCCCATTG+AGG 0.568869 5_2:-10241497 Msa0756180:CDS
TGGGAGGGTTTATTAATCAG+AGG 0.569490 5_2:-10242732 Msa0756180:CDS
GTCGATGTTGGAGGCTTATG+GGG 0.569573 5_2:-10242890 Msa0756180:CDS
GGCTATCTCTGACAAATGCT+GGG 0.569692 5_2:-10239649 Msa0756180:CDS
GTGCTCTCTGCAGTGAATGA+AGG 0.573610 5_2:-10238525 Msa0756180:CDS
GAGGCATCGGGATCCTCAAG+GGG 0.579559 5_2:+10242101 None:intergenic
GTTAGCTTCTGAGCTACAGG+AGG 0.579964 5_2:+10241544 None:intergenic
GTTTGTCCAGATAATGTGGC+AGG 0.581670 5_2:-10241142 Msa0756180:CDS
TGCAGAGACCGAAATATGAC+TGG 0.581828 5_2:+10242667 None:intergenic
AAAACTACATCAGGCAGCCA+AGG 0.582232 5_2:+10238663 None:intergenic
AATGCTGGGTACCCAAGTAA+TGG 0.583247 5_2:-10239635 Msa0756180:CDS
AGAACAAAAGGACTTTGAGC+TGG 0.584523 5_2:-10238358 Msa0756180:CDS
TTTAGTAGCTGTAACACTGT+GGG 0.585322 5_2:+10240922 None:intergenic
ACCTTACAAAGCACTTGTCG+AGG 0.587099 5_2:+10239053 None:intergenic
TGATTGGGAACTGGGTTCGG+TGG 0.588383 5_2:+10243419 None:intergenic
CTCAATAGTGCCCATTGAGG+AGG 0.589147 5_2:-10241494 Msa0756180:CDS
CCTTAAGGACTTCATGAGAG+TGG 0.589374 5_2:+10241826 None:intergenic
TGGACGGAAGTCGATGTTGG+AGG 0.591488 5_2:-10242899 Msa0756180:CDS
GGCCCTTGCTCTGCAAATGA+CGG 0.591616 5_2:-10240633 Msa0756180:CDS
GTTGTTTAATCGTGATGACA+GGG 0.593151 5_2:-10238304 Msa0756180:CDS
AGCTACAGGAGGTTGATCAC+TGG 0.593278 5_2:+10241555 None:intergenic
GGATCCCGATGCCTCAAAAG+AGG 0.593390 5_2:-10242093 Msa0756180:CDS
TTGAGGGCATCCATATAGCA+TGG 0.595418 5_2:+10241256 None:intergenic
AGACTATATGTGAAGAATGG+TGG 0.596012 5_2:-10243224 Msa0756180:CDS
ATTGAGGAAGGATTGGATTG+TGG 0.596580 5_2:+10243527 None:intergenic
AAGAATAATCCATTGTTGTG+AGG 0.596859 5_2:+10238972 None:intergenic
TAGTAGCTGTAGGAGTTGCA+TGG 0.597500 5_2:-10240817 Msa0756180:CDS
CTGAATGCAGATCAGATAGA+GGG 0.598250 5_2:-10241325 Msa0756180:CDS
TGTCATTATGGAGGATCCAC+CGG 0.599171 5_2:+10238788 None:intergenic
AACCGTCATTTGCAGAGCAA+GGG 0.599307 5_2:+10240631 None:intergenic
TTTGGGTTGAGTGATCAGCT+TGG 0.601001 5_2:-10242961 Msa0756180:CDS
GTTCGCAGATTCCGTATGGA+CGG 0.602215 5_2:-10242915 Msa0756180:CDS
AAGGTGCTCTGTCCAAGACT+GGG 0.602746 5_2:-10241807 Msa0756180:CDS
TATATGTGAAGAATGGTGGA+AGG 0.602831 5_2:-10243220 Msa0756180:CDS
TTTGCGGGAAGAGCGACGGA+GGG 0.604704 5_2:+10243455 None:intergenic
AAATCTATCATAAGATAGAG+AGG 0.605785 5_2:-10238248 Msa0756180:CDS
TGGATTCGTAGAGAGAGGGA+GGG 0.607728 5_2:+10243556 None:intergenic
TCATCTATATGAAACTGGAA+AGG 0.612001 5_2:-10238145 Msa0756180:CDS
GTGCCAGAAGATTCAAGGAG+TGG 0.612532 5_2:-10242841 Msa0756180:CDS
CTCACTGCAGAGAAAGTGGA+AGG 0.612854 5_2:-10241226 Msa0756180:CDS
TCGTTGTCACATTAAATTTG+GGG 0.617087 5_2:-10240957 Msa0756180:CDS
ATACTTGCAAAATATTGCAC+CGG 0.617576 5_2:+10241429 None:intergenic
GTTGAGTGATCAGCTTGGGA+AGG 0.621002 5_2:-10242956 Msa0756180:CDS
TAATCAGAGGACCGTAGATG+GGG 0.621529 5_2:-10242719 Msa0756180:CDS
TATAGATGATACGTCCAAAG+AGG 0.623631 5_2:+10238159 None:intergenic
AGGAGCAAAACACATGGCAG+TGG 0.623835 5_2:+10238992 None:intergenic
CACATTATCTGGACAAACAG+TGG 0.625302 5_2:+10241147 None:intergenic
GAGGAAGGATTGGATTGTGG+TGG 0.627980 5_2:+10243530 None:intergenic
TCTGCAGTGAATGAAGGTGA+AGG 0.629597 5_2:-10238519 Msa0756180:CDS
CTTGTGACAAAACCAAACTC+AGG 0.631868 5_2:+10241353 None:intergenic
TTCGAAGTCAAACAACGCGA+AGG 0.636487 5_2:+10243083 None:intergenic
CAAATGACGGTTGATAATGT+TGG 0.639424 5_2:-10240620 Msa0756180:CDS
GTGAATGAAGGTGAAGGAGA+TGG 0.646473 5_2:-10238513 Msa0756180:CDS
TTAAGGACTTCATGAGAGTG+GGG 0.647165 5_2:+10241828 None:intergenic
TAGGGTTTATATGTTTCGCG+AGG 0.654308 5_2:-10243106 Msa0756180:CDS
GCTGGGTACCCAAGTAATGG+AGG 0.655722 5_2:-10239632 Msa0756180:intron
CTTCGAAGATGAGAGTATCG+AGG 0.656364 5_2:-10243067 Msa0756180:CDS
AGTGTTGTCACAAACTGCCA+TGG 0.660349 5_2:-10241100 Msa0756180:CDS
GAAGTCAGCATTGAGCATTG+TGG 0.665576 5_2:-10240698 Msa0756180:CDS
CAACATCTTCAGGTAAACCA+TGG 0.669355 5_2:+10241083 None:intergenic
GGCACAAGTAGTGAAAAGAA+TGG 0.672314 5_2:-10240599 Msa0756180:CDS
GTAGCTGTAACACTGTGGGA+TGG 0.675445 5_2:+10240926 None:intergenic
CACTGTACAATATCACAATG+TGG 0.676395 5_2:-10239765 Msa0756180:CDS
ATAACTTGGAGTCAACAACT+GGG 0.682337 5_2:-10239736 Msa0756180:CDS
AGTGGAAGGTTTACTAACTG+GGG 0.692191 5_2:-10241212 Msa0756180:CDS
AGGCATCGGGATCCTCAAGG+GGG 0.693884 5_2:+10242102 None:intergenic
GCTAAAGAGATGAATTCTTG+TGG 0.699935 5_2:+10243666 None:intergenic
CCATAGCAACTTGTACTGTG+AGG 0.702441 5_2:+10241763 None:intergenic
ACTATTGAGGGAAAGTACGA+AGG 0.710367 5_2:+10241508 None:intergenic
GTTGTGAGGAGCAAAACACA+TGG 0.711346 5_2:+10238986 None:intergenic
ATAGGCAGCCTTATGCAGCA+GGG 0.712099 5_2:+10240979 None:intergenic
AAAAGAATGGTGATTCCAAG+GGG 0.712247 5_2:-10240586 Msa0756180:CDS
GTGATACTGACTGATTCCGG+TGG 0.713602 5_2:-10238804 Msa0756180:CDS
AGAAATTGATGCATGTAAAG+GGG 0.733317 5_2:-10238191 Msa0756180:CDS
GTCTCATGATGTATGCAACG+AGG 0.768233 5_2:-10241895 Msa0756180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCACTTTTATGAAAATTTA+AGG + chr5_2:10239317-10239336 None:intergenic 15.0%
!!! GGTTTTCTTTTTATAAAAAA+AGG - chr5_2:10239494-10239513 Msa0756180:intron 15.0%
!!! AATTTTGAATATCATTTAGA+TGG + chr5_2:10240097-10240116 None:intergenic 15.0%
!! TATACATATTGTAGTTATAA+TGG - chr5_2:10242240-10242259 Msa0756180:intron 15.0%
!!! TAAAAAGAATAAGAGTATAA+TGG - chr5_2:10243397-10243416 Msa0756180:CDS 15.0%
!!! TTTATGTTTTTCATCTGATT+GGG + chr5_2:10238420-10238439 None:intergenic 20.0%
!!! TTTTATGTTTTTCATCTGAT+TGG + chr5_2:10238421-10238440 None:intergenic 20.0%
!!! TCTTCTGTTTTCAAATATAA+AGG + chr5_2:10238815-10238834 None:intergenic 20.0%
!! TTATATTTGAAAACAGAAGA+TGG - chr5_2:10238815-10238834 Msa0756180:CDS 20.0%
!!! TTTTGCTTTGTATATTAGAA+GGG - chr5_2:10239063-10239082 Msa0756180:CDS 20.0%
!! TTAAGATTATAATGCATACA+AGG + chr5_2:10239395-10239414 None:intergenic 20.0%
!!! AAAGAAAATGCTTTTTGTTT+TGG - chr5_2:10239530-10239549 Msa0756180:intron 20.0%
!! TCGTAAATTGTAATAAGTAA+TGG - chr5_2:10239563-10239582 Msa0756180:intron 20.0%
!! CGTAAATTGTAATAAGTAAT+GGG - chr5_2:10239564-10239583 Msa0756180:intron 20.0%
!!! TCAAAATTTTCAGTTTAACA+AGG - chr5_2:10240109-10240128 Msa0756180:intron 20.0%
!!! TTTAATTGAAAATTTTCCAG+AGG + chr5_2:10240941-10240960 None:intergenic 20.0%
!! GAAAAAAACAACATTTCTAA+AGG + chr5_2:10241087-10241106 None:intergenic 20.0%
!! TAAAATGAAACAAGCAATTT+AGG + chr5_2:10241460-10241479 None:intergenic 20.0%
!!! TTCAACTTCTTTTTTTCTTA+TGG - chr5_2:10241665-10241684 Msa0756180:intron 20.0%
!!! TTTTTTTAAACAGACTGTAT+TGG - chr5_2:10241978-10241997 Msa0756180:CDS 20.0%
!! AAAATCAAAATTCCACAAAA+AGG - chr5_2:10242145-10242164 Msa0756180:CDS 20.0%
!! AAATTATAATTTGACTGAGA+TGG + chr5_2:10242356-10242375 None:intergenic 20.0%
!!! TTGTCTAAATCTTTTTGTAT+AGG - chr5_2:10242729-10242748 Msa0756180:CDS 20.0%
!! AATTAAATCAAGCAAGTTAT+TGG + chr5_2:10243078-10243097 None:intergenic 20.0%
! GAAAAATCAAAAACCTTTCT+CGG + chr5_2:10238497-10238516 None:intergenic 25.0%
!! GCATGATAATTTGATTGTTT+TGG - chr5_2:10238544-10238563 Msa0756180:CDS 25.0%
!!! TAATTTGATTGTTTTGGAAG+CGG - chr5_2:10238550-10238569 Msa0756180:CDS 25.0%
!! ATTTGAAACTGTTGTTAAAC+AGG - chr5_2:10238777-10238796 Msa0756180:CDS 25.0%
!! CTTTTGCTTTGTATATTAGA+AGG - chr5_2:10239062-10239081 Msa0756180:CDS 25.0%
!! TTTGTATATTAGAAGGGTTT+TGG - chr5_2:10239069-10239088 Msa0756180:CDS 25.0%
!! TTGTATATTAGAAGGGTTTT+GGG - chr5_2:10239070-10239089 Msa0756180:CDS 25.0%
!! CTTTACCTTCTTTTCAATAT+AGG - chr5_2:10239644-10239663 Msa0756180:CDS 25.0%
! TAATTTCCCAAAATAGATGA+AGG + chr5_2:10239857-10239876 None:intergenic 25.0%
!! ATCTTTGTTATAATTGGTGA+CGG + chr5_2:10239882-10239901 None:intergenic 25.0%
!! GTAAGCATCTTTGTTATAAT+TGG + chr5_2:10239888-10239907 None:intergenic 25.0%
! ATTAGCAAGTACATTAGATA+CGG + chr5_2:10240163-10240182 None:intergenic 25.0%
! CTAATATAATCAATTCTCAC+TGG - chr5_2:10240178-10240197 Msa0756180:intron 25.0%
! AAATTTAATGTGACAACGAT+AGG + chr5_2:10240863-10240882 None:intergenic 25.0%
! TATCGTTGTCACATTAAATT+TGG - chr5_2:10240862-10240881 Msa0756180:CDS 25.0%
! ATCGTTGTCACATTAAATTT+GGG - chr5_2:10240863-10240882 Msa0756180:CDS 25.0%
!!! CGTTTTGTACATAGTTTTAT+TGG - chr5_2:10241308-10241327 Msa0756180:CDS 25.0%
!!! ACCATTTTTACGAATTATAG+AGG - chr5_2:10241542-10241561 Msa0756180:CDS 25.0%
! ACCTCTATAATTCGTAAAAA+TGG + chr5_2:10241546-10241565 None:intergenic 25.0%
!! TTTTTACGAATTATAGAGGT+CGG - chr5_2:10241546-10241565 Msa0756180:CDS 25.0%
!! ATGACTAATATAAGTTTTCC+TGG - chr5_2:10241754-10241773 Msa0756180:CDS 25.0%
!! ATATAAGTTTTCCTGGATTT+TGG - chr5_2:10241761-10241780 Msa0756180:CDS 25.0%
!!! TTTTTTCCCTTGAAATTTTC+AGG - chr5_2:10241849-10241868 Msa0756180:CDS 25.0%
! ACATCAATTCATCAATACAA+TGG + chr5_2:10241954-10241973 None:intergenic 25.0%
! AAAATCGAAGTTCCAAAAAA+AGG - chr5_2:10242109-10242128 Msa0756180:CDS 25.0%
! TGTCTGTATAAATAGTTAGA+TGG - chr5_2:10242390-10242409 Msa0756180:intron 25.0%
! GTCTGTATAAATAGTTAGAT+GGG - chr5_2:10242391-10242410 Msa0756180:intron 25.0%
! TAAATAGTTAGATGGGTAAT+TGG - chr5_2:10242398-10242417 Msa0756180:intron 25.0%
! AAATAGTTAGATGGGTAATT+GGG - chr5_2:10242399-10242418 Msa0756180:intron 25.0%
!!! TCTAGTTCTATTTTGAATTC+TGG - chr5_2:10242452-10242471 Msa0756180:intron 25.0%
! ATAATGACTTGAAGATACAA+TGG + chr5_2:10242513-10242532 None:intergenic 25.0%
! TGTATCTTCAAGTCATTATT+AGG - chr5_2:10242514-10242533 Msa0756180:intron 25.0%
!! ATTTGATTTAACCATGTGTT+TGG - chr5_2:10242608-10242627 Msa0756180:intron 25.0%
! TGAAGTTACAATTTCCAAAA+TGG - chr5_2:10243252-10243271 Msa0756180:CDS 25.0%
! AAATCTATCATAAGATAGAG+AGG - chr5_2:10243573-10243592 Msa0756180:CDS 25.0%
!!! TTTAGAGGATTTTAGGGTTA+GGG + chr5_2:10238186-10238205 None:intergenic 30.0%
!!! ATTTAGAGGATTTTAGGGTT+AGG + chr5_2:10238187-10238206 None:intergenic 30.0%
! AGAGGATTTAGAGGATTTTA+GGG + chr5_2:10238192-10238211 None:intergenic 30.0%
GGGTTTGATTGAATGAATTA+GGG + chr5_2:10238222-10238241 None:intergenic 30.0%
AGGGTTTGATTGAATGAATT+AGG + chr5_2:10238223-10238242 None:intergenic 30.0%
TTGAGACTATATGTGAAGAA+TGG - chr5_2:10238594-10238613 Msa0756180:CDS 30.0%
GTTGACATTGAAGAAAAAAG+TGG - chr5_2:10238685-10238704 Msa0756180:CDS 30.0%
!!! AAGTTTCTGGCTTTTTTGTT+TGG - chr5_2:10238842-10238861 Msa0756180:CDS 30.0%
!!! AGTTTCTGGCTTTTTTGTTT+GGG - chr5_2:10238843-10238862 Msa0756180:CDS 30.0%
AACACAGTAAAATGTATGCT+GGG + chr5_2:10239209-10239228 None:intergenic 30.0%
AAACACAGTAAAATGTATGC+TGG + chr5_2:10239210-10239229 None:intergenic 30.0%
AGAAAATGTTTGTGCAACAT+TGG - chr5_2:10239285-10239304 Msa0756180:intron 30.0%
AAGTTGAGCTCTCTTAAATT+TGG - chr5_2:10239472-10239491 Msa0756180:intron 30.0%
AGTTGAGCTCTCTTAAATTT+GGG - chr5_2:10239473-10239492 Msa0756180:intron 30.0%
TTAGCAAGTACATTAGATAC+GGG + chr5_2:10240162-10240181 None:intergenic 30.0%
ATACTTGCAAAATATTGCAC+CGG + chr5_2:10240395-10240414 None:intergenic 30.0%
TAAAACTCATCTTATGGAAC+TGG - chr5_2:10240435-10240454 Msa0756180:intron 30.0%
! TTGATCGCCAATCTAAAATT+AGG - chr5_2:10240758-10240777 Msa0756180:CDS 30.0%
!! ACATAAGTTGTTGCTTTCTT+TGG - chr5_2:10240786-10240805 Msa0756180:CDS 30.0%
!! CATAAGTTGTTGCTTTCTTT+GGG - chr5_2:10240787-10240806 Msa0756180:CDS 30.0%
TCGTTGTCACATTAAATTTG+GGG - chr5_2:10240864-10240883 Msa0756180:CDS 30.0%
AGGAAAAAATCTAAATCCTC+TGG - chr5_2:10240922-10240941 Msa0756180:CDS 30.0%
GATGATTATTTAGTAGCTGT+AGG - chr5_2:10240994-10241013 Msa0756180:CDS 30.0%
!!! GTTGTTTTTTTCGCTTAAGA+TGG - chr5_2:10241095-10241114 Msa0756180:CDS 30.0%
TTCTTCTACATTACTTTCAG+AGG - chr5_2:10241275-10241294 Msa0756180:CDS 30.0%
! TTTAAAATTCATCTACCCTC+TGG - chr5_2:10241342-10241361 Msa0756180:CDS 30.0%
!! TTGCTTGTTTCATTTTAACG+TGG - chr5_2:10241463-10241482 Msa0756180:CDS 30.0%
GAATGCAAAACAAAATCACA+AGG + chr5_2:10241602-10241621 None:intergenic 30.0%
TAAGTGATGCATTGAGTAAA+AGG + chr5_2:10241637-10241656 None:intergenic 30.0%
AATTGACGTGAAATTATAGC+AGG + chr5_2:10241732-10241751 None:intergenic 30.0%
! CATCTTTTGTTCAGTTTCAT+TGG - chr5_2:10241791-10241810 Msa0756180:CDS 30.0%
!! TTGGTTGATTTTCAATTGTC+TGG - chr5_2:10241810-10241829 Msa0756180:CDS 30.0%
CAATATCATAACAATCATGC+CGG + chr5_2:10241878-10241897 None:intergenic 30.0%
CAATTCATCAATACAATGGA+AGG + chr5_2:10241950-10241969 None:intergenic 30.0%
AACTGCTTGGAAAAACTATT+TGG - chr5_2:10242024-10242043 Msa0756180:CDS 30.0%
TCCAAAAAAAGGAAGAAAAC+AGG - chr5_2:10242120-10242139 Msa0756180:CDS 30.0%
CCAAAAAAAGGAAGAAAACA+GGG - chr5_2:10242121-10242140 Msa0756180:CDS 30.0%
GTTTCATTTGTGAAGGAATA+TGG - chr5_2:10242538-10242557 Msa0756180:intron 30.0%
CTAATCCACACTATAAAATC+CGG - chr5_2:10242570-10242589 Msa0756180:intron 30.0%
AAATGAAAACAGATAGATGC+CGG + chr5_2:10242592-10242611 None:intergenic 30.0%
AAGAATAATCCATTGTTGTG+AGG + chr5_2:10242852-10242871 None:intergenic 30.0%
! GATATGTTGTATGCATTTTG+AGG + chr5_2:10242883-10242902 None:intergenic 30.0%
TCATCACAGAATTGAATTTG+AGG - chr5_2:10242926-10242945 Msa0756180:CDS 30.0%
TAAATGTTCACTTCCACTTT+CGG + chr5_2:10243216-10243235 None:intergenic 30.0%
TTGAATGTCGAGAATTTATC+TGG + chr5_2:10243347-10243366 None:intergenic 30.0%
CTCGACATTCAATAAACTTA+CGG - chr5_2:10243355-10243374 Msa0756180:CDS 30.0%
GAGAAATTGATGCATGTAAA+GGG - chr5_2:10243629-10243648 Msa0756180:CDS 30.0%
AGAAATTGATGCATGTAAAG+GGG - chr5_2:10243630-10243649 Msa0756180:CDS 30.0%
ACGTATCATCTATATGAAAC+TGG - chr5_2:10243671-10243690 Msa0756180:CDS 30.0%
TCATCTATATGAAACTGGAA+AGG - chr5_2:10243676-10243695 Msa0756180:CDS 30.0%
GCTAAAGAGATGAATTCTTG+TGG + chr5_2:10238158-10238177 None:intergenic 35.0%
! GAGAGGATTTAGAGGATTTT+AGG + chr5_2:10238193-10238212 None:intergenic 35.0%
!!! ATGAATTAGGGTTTTGAGAG+AGG + chr5_2:10238210-10238229 None:intergenic 35.0%
GAAGAAATGAGATTGGAAGA+GGG + chr5_2:10238242-10238261 None:intergenic 35.0%
TGAAGAAATGAGATTGGAAG+AGG + chr5_2:10238243-10238262 None:intergenic 35.0%
!!! TTGGGGATTTTTGGAATTGT+TGG + chr5_2:10238330-10238349 None:intergenic 35.0%
! TTTTCATCTGATTGGGAACT+GGG + chr5_2:10238413-10238432 None:intergenic 35.0%
! TTTTTCATCTGATTGGGAAC+TGG + chr5_2:10238414-10238433 None:intergenic 35.0%
!!! GATTTTTCTGATTTGCTACC+TGG - chr5_2:10238509-10238528 Msa0756180:CDS 35.0%
AGACTATATGTGAAGAATGG+TGG - chr5_2:10238597-10238616 Msa0756180:CDS 35.0%
! TATATGTGAAGAATGGTGGA+AGG - chr5_2:10238601-10238620 Msa0756180:CDS 35.0%
AACGATCTCGATAGAACAAA+AGG + chr5_2:10238668-10238687 None:intergenic 35.0%
AGAAAAAAGTGGATGTGCAT+AGG - chr5_2:10238696-10238715 Msa0756180:CDS 35.0%
GAAAAAAGTGGATGTGCATA+GGG - chr5_2:10238697-10238716 Msa0756180:CDS 35.0%
AGAAGATGGAAGAAAGTTTC+TGG - chr5_2:10238829-10238848 Msa0756180:CDS 35.0%
TTCTTGCAGGATTTGATTGA+GGG - chr5_2:10239016-10239035 Msa0756180:CDS 35.0%
!!! TATATTAGAAGGGTTTTGGG+AGG - chr5_2:10239073-10239092 Msa0756180:CDS 35.0%
!!! ATATTAGAAGGGTTTTGGGA+GGG - chr5_2:10239074-10239093 Msa0756180:intron 35.0%
TGTAATGCAAAGTCTTCAGA+TGG + chr5_2:10239255-10239274 None:intergenic 35.0%
TCTGAAGACTTTGCATTACA+CGG - chr5_2:10239255-10239274 Msa0756180:intron 35.0%
ATGTTTGTGCAACATTGGAT+TGG - chr5_2:10239290-10239309 Msa0756180:intron 35.0%
AAGCTTACAACATAGCATCA+CGG + chr5_2:10239346-10239365 None:intergenic 35.0%
CTGTAATCTTATGACTTTCG+AGG - chr5_2:10239423-10239442 Msa0756180:intron 35.0%
AGCTCAACTTGATTATAAGC+TGG + chr5_2:10239462-10239481 None:intergenic 35.0%
TGCAGCCTATATTGAAAAGA+AGG + chr5_2:10239652-10239671 None:intergenic 35.0%
! TGTATCCTTATCCTCTTTTG+AGG + chr5_2:10239742-10239761 None:intergenic 35.0%
ACAGCAATTGTTCTAACTTC+TGG + chr5_2:10239816-10239835 None:intergenic 35.0%
! AGTTAGAACAATTGCTGTTG+AGG - chr5_2:10239818-10239837 Msa0756180:CDS 35.0%
! GTTAGAACAATTGCTGTTGA+GGG - chr5_2:10239819-10239838 Msa0756180:CDS 35.0%
! TCGTGTCCTTCATCTATTTT+GGG - chr5_2:10239848-10239867 Msa0756180:intron 35.0%
GTACATTAGATACGGGAATT+AGG + chr5_2:10240155-10240174 None:intergenic 35.0%
GCTGCATTACACTAGTAAAA+AGG - chr5_2:10240359-10240378 Msa0756180:intron 35.0%
ACTAGTAAAAAGGTCTCCAA+TGG - chr5_2:10240369-10240388 Msa0756180:intron 35.0%
! ATTTTGCAAGTATGCCATCT+CGG - chr5_2:10240402-10240421 Msa0756180:intron 35.0%
! AGCGTCTAAAACTCATCTTA+TGG - chr5_2:10240429-10240448 Msa0756180:intron 35.0%
AAAGTGGAAGGTTTACTAAC+TGG - chr5_2:10240607-10240626 Msa0756180:CDS 35.0%
AAGTGGAAGGTTTACTAACT+GGG - chr5_2:10240608-10240627 Msa0756180:CDS 35.0%
! GTGCAGACCTAATTTTAGAT+TGG + chr5_2:10240768-10240787 None:intergenic 35.0%
TTTAGTAGCTGTAACACTGT+GGG + chr5_2:10240902-10240921 None:intergenic 35.0%
! TTTTAGTAGCTGTAACACTG+TGG + chr5_2:10240903-10240922 None:intergenic 35.0%
ACAGTGTTACAGCTACTAAA+AGG - chr5_2:10240902-10240921 Msa0756180:CDS 35.0%
AGATCTAAAGATTGCTTTCC+TGG + chr5_2:10241061-10241080 None:intergenic 35.0%
! CATAGACATATCTCCTGTTT+TGG - chr5_2:10241158-10241177 Msa0756180:CDS 35.0%
!!! ATCTCCTGTTTTGGCATATA+TGG - chr5_2:10241167-10241186 Msa0756180:CDS 35.0%
!! CAAATGACGGTTGATAATGT+TGG - chr5_2:10241201-10241220 Msa0756180:CDS 35.0%
TGAAAAGAATGGTGATTCCA+AGG - chr5_2:10241233-10241252 Msa0756180:CDS 35.0%
GAAAAGAATGGTGATTCCAA+GGG - chr5_2:10241234-10241253 Msa0756180:CDS 35.0%
AAAAGAATGGTGATTCCAAG+GGG - chr5_2:10241235-10241254 Msa0756180:CDS 35.0%
!! AATCTTAGTTTTCTTCCCCT+TGG + chr5_2:10241253-10241272 None:intergenic 35.0%
TGCAATGAATACCAGCAATT+TGG + chr5_2:10241403-10241422 None:intergenic 35.0%
AAACTAGCACAGTGCAAATT+GGG + chr5_2:10241508-10241527 None:intergenic 35.0%
TAAACTAGCACAGTGCAAAT+TGG + chr5_2:10241509-10241528 None:intergenic 35.0%
CGGAAACCTGAAAATTTCAA+GGG + chr5_2:10241858-10241877 None:intergenic 35.0%
!!! CCTTGAAATTTTCAGGTTTC+CGG - chr5_2:10241856-10241875 Msa0756180:CDS 35.0%
GTTAAATGAATGAGTGAGCT+AGG + chr5_2:10241921-10241940 None:intergenic 35.0%
CACTGTACAATATCACAATG+TGG - chr5_2:10242056-10242075 Msa0756180:CDS 35.0%
CAATGTGGATTCACATAACT+TGG - chr5_2:10242071-10242090 Msa0756180:CDS 35.0%
ATAACTTGGAGTCAACAACT+GGG - chr5_2:10242085-10242104 Msa0756180:CDS 35.0%
! CCCTGTTTTCTTCCTTTTTT+TGG + chr5_2:10242124-10242143 None:intergenic 35.0%
AAAATTCCACAAAAAGGCGA+AGG - chr5_2:10242151-10242170 Msa0756180:CDS 35.0%
! TTTTCTCACCTCCATTACTT+GGG + chr5_2:10242200-10242219 None:intergenic 35.0%
! ATTTTCTCACCTCCATTACT+TGG + chr5_2:10242201-10242220 None:intergenic 35.0%
ATTAGGCGTTTCATTTGTGA+AGG - chr5_2:10242531-10242550 Msa0756180:intron 35.0%
!! ATAGTGTGGATTAGCCAAAA+GGG + chr5_2:10242564-10242583 None:intergenic 35.0%
!! TATAGTGTGGATTAGCCAAA+AGG + chr5_2:10242565-10242584 None:intergenic 35.0%
AACAAAAAGAGCCAAACACA+TGG + chr5_2:10242622-10242641 None:intergenic 35.0%
CAGAATTGAATTTGAGGAAG+AGG - chr5_2:10242932-10242951 Msa0756180:CDS 35.0%
! AATGTGATACTGACTGATTC+CGG - chr5_2:10243014-10243033 Msa0756180:CDS 35.0%
! GAAGGCTTTTGATGTCATTA+TGG + chr5_2:10243048-10243067 None:intergenic 35.0%
!!! ACAGTTTTGGCTACAATCAA+GGG + chr5_2:10243278-10243297 None:intergenic 35.0%
!! AAGAGTATAATGGATGCAGT+TGG - chr5_2:10243407-10243426 Msa0756180:CDS 35.0%
!! AGAGTATAATGGATGCAGTT+GGG - chr5_2:10243408-10243427 Msa0756180:CDS 35.0%
!! TTCTTGGTTTGTTCACTTGT+TGG - chr5_2:10243437-10243456 Msa0756180:CDS 35.0%
!! TCTTGGTTTGTTCACTTGTT+GGG - chr5_2:10243438-10243457 Msa0756180:CDS 35.0%
GTCATCACGATTAAACAACT+TGG + chr5_2:10243516-10243535 None:intergenic 35.0%
AGTTGTTTAATCGTGATGAC+AGG - chr5_2:10243516-10243535 Msa0756180:CDS 35.0%
GTTGTTTAATCGTGATGACA+GGG - chr5_2:10243517-10243536 Msa0756180:CDS 35.0%
TGACATGATGTTATCTTCTC+TGG - chr5_2:10243547-10243566 Msa0756180:CDS 35.0%
AGCTAGTAATAACGATGAAC+TGG - chr5_2:10243607-10243626 Msa0756180:CDS 35.0%
GGAGAAATTGATGCATGTAA+AGG - chr5_2:10243628-10243647 Msa0756180:CDS 35.0%
TATAGATGATACGTCCAAAG+AGG + chr5_2:10243665-10243684 None:intergenic 35.0%
!!! GGTTTTGAGAGAGGATTTAG+AGG + chr5_2:10238201-10238220 None:intergenic 40.0%
AGGGAGTGAAGAAATGAGAT+TGG + chr5_2:10238249-10238268 None:intergenic 40.0%
ATTGAGGAAGGATTGGATTG+TGG + chr5_2:10238297-10238316 None:intergenic 40.0%
TGTTGGATTCGAGAAGATTG+AGG + chr5_2:10238313-10238332 None:intergenic 40.0%
!! AGCGGATTCGATTTTGTCTT+CGG - chr5_2:10238568-10238587 Msa0756180:CDS 40.0%
! ATGGTGGAAGGAGAATTTAC+CGG - chr5_2:10238613-10238632 Msa0756180:CDS 40.0%
TAGGGTTTATATGTTTCGCG+AGG - chr5_2:10238715-10238734 Msa0756180:CDS 40.0%
GGGATATATTGTTTCGAGCA+TGG - chr5_2:10238951-10238970 Msa0756180:CDS 40.0%
ATTCCACTCCTTGAATCTTC+TGG + chr5_2:10238986-10239005 None:intergenic 40.0%
TCAAGGAGTGGAATTGAGAA+TGG - chr5_2:10238992-10239011 Msa0756180:CDS 40.0%
CAAGGAGTGGAATTGAGAAT+GGG - chr5_2:10238993-10239012 Msa0756180:CDS 40.0%
! AATTGAGAATGGGTTCTTGC+AGG - chr5_2:10239003-10239022 Msa0756180:CDS 40.0%
GTTCTTGCAGGATTTGATTG+AGG - chr5_2:10239015-10239034 Msa0756180:CDS 40.0%
CAAAAGTTCCAGAACTTGCA+TGG + chr5_2:10239048-10239067 None:intergenic 40.0%
TGGGAGGGTTTATTAATCAG+AGG - chr5_2:10239089-10239108 Msa0756180:intron 40.0%
ATTAATCAGAGGACCGTAGA+TGG - chr5_2:10239100-10239119 Msa0756180:intron 40.0%
TTAATCAGAGGACCGTAGAT+GGG - chr5_2:10239101-10239120 Msa0756180:intron 40.0%
TAGTTTCTCAACCCCATCTA+CGG + chr5_2:10239116-10239135 None:intergenic 40.0%
CTGAAGACTTTGCATTACAC+GGG - chr5_2:10239256-10239275 Msa0756180:intron 40.0%
TATAAGCTGGTATACCAACC+AGG + chr5_2:10239449-10239468 None:intergenic 40.0%
! GAATGCTTTGCATCTGCTTT+TGG - chr5_2:10239689-10239708 Msa0756180:CDS 40.0%
!!! TTATCCTCTTTTGAGGCATC+GGG + chr5_2:10239735-10239754 None:intergenic 40.0%
!!! CTTATCCTCTTTTGAGGCAT+CGG + chr5_2:10239736-10239755 None:intergenic 40.0%
! GTCGTGTCCTTCATCTATTT+TGG - chr5_2:10239847-10239866 Msa0756180:intron 40.0%
ATGATGTATGCAACGAGGTA+AGG - chr5_2:10239931-10239950 Msa0756180:intron 40.0%
GTAAGGCTTTCTACGTTGAA+TGG - chr5_2:10239948-10239967 Msa0756180:intron 40.0%
TTAAGGACTTCATGAGAGTG+GGG + chr5_2:10239996-10240015 None:intergenic 40.0%
CTTAAGGACTTCATGAGAGT+GGG + chr5_2:10239997-10240016 None:intergenic 40.0%
! ATCAATTCTCACTGGTTAGC+TGG - chr5_2:10240186-10240205 Msa0756180:intron 40.0%
! TTTGTTAGCTTCTGAGCTAC+AGG + chr5_2:10240283-10240302 None:intergenic 40.0%
! ACTATTGAGGGAAAGTACGA+AGG + chr5_2:10240316-10240335 None:intergenic 40.0%
CTTGTGACAAAACCAAACTC+AGG + chr5_2:10240471-10240490 None:intergenic 40.0%
CTGAATGCAGATCAGATAGA+GGG - chr5_2:10240496-10240515 Msa0756180:intron 40.0%
AGTCAGTGAACCATGCTATA+TGG - chr5_2:10240555-10240574 Msa0756180:CDS 40.0%
TGCAGTGAGTAACTCTTTGA+GGG + chr5_2:10240584-10240603 None:intergenic 40.0%
AGTGGAAGGTTTACTAACTG+GGG - chr5_2:10240609-10240628 Msa0756180:CDS 40.0%
CACATTATCTGGACAAACAG+TGG + chr5_2:10240677-10240696 None:intergenic 40.0%
CACTGTTTGTCCAGATAATG+TGG - chr5_2:10240675-10240694 Msa0756180:CDS 40.0%
CAACATCTTCAGGTAAACCA+TGG + chr5_2:10240741-10240760 None:intergenic 40.0%
!! AAGTTGTTGCTTTCTTTGGG+AGG - chr5_2:10240790-10240809 Msa0756180:CDS 40.0%
! AAGTCAGCATTGAGCATTGT+GGG - chr5_2:10241124-10241143 Msa0756180:CDS 40.0%
GGCACAAGTAGTGAAAAGAA+TGG - chr5_2:10241222-10241241 Msa0756180:CDS 40.0%
GAAGAAAATGCACAACCAGA+GGG + chr5_2:10241360-10241379 None:intergenic 40.0%
AGAAGAAAATGCACAACCAG+AGG + chr5_2:10241361-10241380 None:intergenic 40.0%
CAGTGCAAATTGGGAATGAA+AGG + chr5_2:10241499-10241518 None:intergenic 40.0%
GAAATTATAGCAGGCCAGAA+TGG + chr5_2:10241723-10241742 None:intergenic 40.0%
CCGGAAACCTGAAAATTTCA+AGG + chr5_2:10241859-10241878 None:intergenic 40.0%
CATAACTTGGAGTCAACAAC+TGG - chr5_2:10242084-10242103 Msa0756180:CDS 40.0%
TGGGTAATTGGGTAGACATA+TGG - chr5_2:10242410-10242429 Msa0756180:intron 40.0%
GGGTAATTGGGTAGACATAT+GGG - chr5_2:10242411-10242430 Msa0756180:intron 40.0%
AGAAGAAACCTGTAGAGAAG+TGG + chr5_2:10242478-10242497 None:intergenic 40.0%
! AGATGCCGGATTTTATAGTG+TGG + chr5_2:10242578-10242597 None:intergenic 40.0%
TGAACTATGTGTATCGTCTC+TGG - chr5_2:10242680-10242699 Msa0756180:CDS 40.0%
!! TACTGCTGTTCTGAAGTTCA+TGG - chr5_2:10242800-10242819 Msa0756180:CDS 40.0%
! TGTTTTGCTCCTCACAACAA+TGG - chr5_2:10242840-10242859 Msa0756180:CDS 40.0%
CAATTCTGTGATGATACAGC+TGG + chr5_2:10242920-10242939 None:intergenic 40.0%
! CATAGCTGAAAGAGCTTTTC+AGG + chr5_2:10242980-10242999 None:intergenic 40.0%
! GGCTTTTGATGTCATTATGG+AGG + chr5_2:10243045-10243064 None:intergenic 40.0%
CAAGTTATTGGCAAGAGTGA+AGG + chr5_2:10243066-10243085 None:intergenic 40.0%
!!! CACAGTTTTGGCTACAATCA+AGG + chr5_2:10243279-10243298 None:intergenic 40.0%
CAATAAACTTACGGCTATGC+TGG - chr5_2:10243364-10243383 Msa0756180:CDS 40.0%
!! GAGTATAATGGATGCAGTTG+GGG - chr5_2:10243409-10243428 Msa0756180:CDS 40.0%
! TGCAGTTGGGGATATTTTCT+TGG - chr5_2:10243421-10243440 Msa0756180:CDS 40.0%
! ACTTGTTGGGCTAGAACAAA+AGG - chr5_2:10243451-10243470 Msa0756180:CDS 40.0%
AGAACAAAAGGACTTTGAGC+TGG - chr5_2:10243463-10243482 Msa0756180:CDS 40.0%
TTAATCGTGATGACAGGGAT+TGG - chr5_2:10243522-10243541 Msa0756180:CDS 40.0%
TAATCGTGATGACAGGGATT+GGG - chr5_2:10243523-10243542 Msa0756180:CDS 40.0%
!!! GGATTTTAGGGTTAGGGTTG+TGG + chr5_2:10238180-10238199 None:intergenic 45.0%
!! GTGATGGATTCGTAGAGAGA+GGG + chr5_2:10238272-10238291 None:intergenic 45.0%
CGAGAAGATTGAGGAAGGAT+TGG + chr5_2:10238304-10238323 None:intergenic 45.0%
GGATTCGAGAAGATTGAGGA+AGG + chr5_2:10238309-10238328 None:intergenic 45.0%
ATCTGATTGGGAACTGGGTT+CGG + chr5_2:10238408-10238427 None:intergenic 45.0%
TCATGCAATGCTTGAACTCC+AGG + chr5_2:10238530-10238549 None:intergenic 45.0%
! GCGGATTCGATTTTGTCTTC+GGG - chr5_2:10238569-10238588 Msa0756180:CDS 45.0%
! CGGATTCGATTTTGTCTTCG+GGG - chr5_2:10238570-10238589 Msa0756180:CDS 45.0%
TTCGAAGTCAAACAACGCGA+AGG + chr5_2:10238741-10238760 None:intergenic 45.0%
!! CTTCGAAGATGAGAGTATCG+AGG - chr5_2:10238754-10238773 Msa0756180:CDS 45.0%
!! TTTGGGTTGAGTGATCAGCT+TGG - chr5_2:10238860-10238879 Msa0756180:CDS 45.0%
!! TTGGGTTGAGTGATCAGCTT+GGG - chr5_2:10238861-10238880 Msa0756180:CDS 45.0%
ATTCGTTCGCAGATTCCGTA+TGG - chr5_2:10238902-10238921 Msa0756180:CDS 45.0%
!! AACATCGACTTCCGTCCATA+CGG + chr5_2:10238920-10238939 None:intergenic 45.0%
AAGTCGATGTTGGAGGCTTA+TGG - chr5_2:10238929-10238948 Msa0756180:CDS 45.0%
AGTCGATGTTGGAGGCTTAT+GGG - chr5_2:10238930-10238949 Msa0756180:CDS 45.0%
AAGCTGTGCCAGAAGATTCA+AGG - chr5_2:10238975-10238994 Msa0756180:CDS 45.0%
GGTTCTATCCATGCAAGTTC+TGG - chr5_2:10239037-10239056 Msa0756180:CDS 45.0%
TAATCAGAGGACCGTAGATG+GGG - chr5_2:10239102-10239121 Msa0756180:intron 45.0%
TTGCCGAGCCAGTCATATTT+CGG - chr5_2:10239146-10239165 Msa0756180:intron 45.0%
! AGACCGAAATATGACTGGCT+CGG + chr5_2:10239152-10239171 None:intergenic 45.0%
TGCAGAGACCGAAATATGAC+TGG + chr5_2:10239157-10239176 None:intergenic 45.0%
AGTCATATTTCGGTCTCTGC+AGG - chr5_2:10239156-10239175 Msa0756180:intron 45.0%
ATCTTATGACTTTCGAGGCC+TGG - chr5_2:10239428-10239447 Msa0756180:intron 45.0%
TTTGGACATATTCCCCCTTG+AGG - chr5_2:10239707-10239726 Msa0756180:CDS 45.0%
CGATGCCTCAAAAGAGGATA+AGG - chr5_2:10239734-10239753 Msa0756180:CDS 45.0%
GTCTCATGATGTATGCAACG+AGG - chr5_2:10239926-10239945 Msa0756180:intron 45.0%
CCTTAAGGACTTCATGAGAG+TGG + chr5_2:10239998-10240017 None:intergenic 45.0%
CCACTCTCATGAAGTCCTTA+AGG - chr5_2:10239995-10240014 Msa0756180:intron 45.0%
AGCATTAAGTGACCCAGTCT+TGG + chr5_2:10240029-10240048 None:intergenic 45.0%
AAGACTGGGTCACTTAATGC+TGG - chr5_2:10240028-10240047 Msa0756180:intron 45.0%
CCATAGCAACTTGTACTGTG+AGG + chr5_2:10240061-10240080 None:intergenic 45.0%
CCTCACAGTACAAGTTGCTA+TGG - chr5_2:10240058-10240077 Msa0756180:intron 45.0%
CGTTGTTGTGTGATTCCTGT+AGG - chr5_2:10240210-10240229 Msa0756180:intron 45.0%
TGTTGTGTGATTCCTGTAGG+TGG - chr5_2:10240213-10240232 Msa0756180:intron 45.0%
TCCTCAATGGGCACTATTGA+GGG + chr5_2:10240328-10240347 None:intergenic 45.0%
CGATTACATGCCTCCTCAAT+GGG + chr5_2:10240340-10240359 None:intergenic 45.0%
GTAAAAAGGTCTCCAATGGC+CGG - chr5_2:10240373-10240392 Msa0756180:intron 45.0%
! CAAAATATTGCACCGGCCAT+TGG + chr5_2:10240388-10240407 None:intergenic 45.0%
! GGTCAAAGCATTCCTGAGTT+TGG - chr5_2:10240456-10240475 Msa0756180:intron 45.0%
GCTGAATGCAGATCAGATAG+AGG - chr5_2:10240495-10240514 Msa0756180:intron 45.0%
!! TTGAGGGCATCCATATAGCA+TGG + chr5_2:10240568-10240587 None:intergenic 45.0%
CTGCAGTGAGTAACTCTTTG+AGG + chr5_2:10240585-10240604 None:intergenic 45.0%
GTTACTCACTGCAGAGAAAG+TGG - chr5_2:10240591-10240610 Msa0756180:CDS 45.0%
GTTTGTCCAGATAATGTGGC+AGG - chr5_2:10240679-10240698 Msa0756180:CDS 45.0%
AGAAGTCCTGCCACATTATC+TGG + chr5_2:10240688-10240707 None:intergenic 45.0%
AGTGTTGTCACAAACTGCCA+TGG - chr5_2:10240721-10240740 Msa0756180:CDS 45.0%
GATTGGCGATCAACATCTTC+AGG + chr5_2:10240751-10240770 None:intergenic 45.0%
CTTATGCAGCAGGGTTGTTA+AGG + chr5_2:10240836-10240855 None:intergenic 45.0%
CTTAACAACCCTGCTGCATA+AGG - chr5_2:10240834-10240853 Msa0756180:CDS 45.0%
TAGTAGCTGTAGGAGTTGCA+TGG - chr5_2:10241004-10241023 Msa0756180:CDS 45.0%
! TAGAGACTTGCTTCAGCATG+AGG - chr5_2:10241032-10241051 Msa0756180:CDS 45.0%
! GAAGTCAGCATTGAGCATTG+TGG - chr5_2:10241123-10241142 Msa0756180:CDS 45.0%
AGGGCCATATATGCCAAAAC+AGG + chr5_2:10241174-10241193 None:intergenic 45.0%
AACCGTCATTTGCAGAGCAA+GGG + chr5_2:10241193-10241212 None:intergenic 45.0%
GCATGTCAAAGCCAAATTGC+TGG - chr5_2:10241389-10241408 Msa0756180:CDS 45.0%
!! GCAGCGAATTTTGACCATTC+TGG - chr5_2:10241706-10241725 Msa0756180:intron 45.0%
GATGCAGACAACCAAAATCC+AGG + chr5_2:10241775-10241794 None:intergenic 45.0%
! AGATAGCCTTCGCCTTTTTG+TGG + chr5_2:10242160-10242179 None:intergenic 45.0%
AGGCTATCTCTGACAAATGC+TGG - chr5_2:10242171-10242190 Msa0756180:intron 45.0%
GGCTATCTCTGACAAATGCT+GGG - chr5_2:10242172-10242191 Msa0756180:intron 45.0%
AATGCTGGGTACCCAAGTAA+TGG - chr5_2:10242186-10242205 Msa0756180:intron 45.0%
! GTGCTCAAGTTGCATGCATT+TGG + chr5_2:10242281-10242300 None:intergenic 45.0%
TTGAGCACACTGTGCGAAAT+AGG - chr5_2:10242293-10242312 Msa0756180:intron 45.0%
AATTCTGGCCACTTCTCTAC+AGG - chr5_2:10242467-10242486 Msa0756180:intron 45.0%
! GTGAAGGAATATGGCCCTTT+TGG - chr5_2:10242547-10242566 Msa0756180:intron 45.0%
ACCTCGACAAGTGCTTTGTA+AGG - chr5_2:10242767-10242786 Msa0756180:CDS 45.0%
! ACCTTACAAAGCACTTGTCG+AGG + chr5_2:10242771-10242790 None:intergenic 45.0%
GTTGTGAGGAGCAAAACACA+TGG + chr5_2:10242838-10242857 None:intergenic 45.0%
TGTCATTATGGAGGATCCAC+CGG + chr5_2:10243036-10243055 None:intergenic 45.0%
AAAACTACATCAGGCAGCCA+AGG + chr5_2:10243161-10243180 None:intergenic 45.0%
! TTGGCTGCCTGATGTAGTTT+TGG - chr5_2:10243160-10243179 Msa0756180:CDS 45.0%
!!! CCTGATGTAGTTTTGGCACT+GGG - chr5_2:10243167-10243186 Msa0756180:CDS 45.0%
GTTCTACAACACACCGAAAG+TGG - chr5_2:10243200-10243219 Msa0756180:CDS 45.0%
! GCTACAATCAAGGGCCATTT+TGG + chr5_2:10243269-10243288 None:intergenic 45.0%
TCTGCAGTGAATGAAGGTGA+AGG - chr5_2:10243302-10243321 Msa0756180:CDS 45.0%
GTGAATGAAGGTGAAGGAGA+TGG - chr5_2:10243308-10243327 Msa0756180:CDS 45.0%
AAGGACTTTGAGCTGGCATT+AGG - chr5_2:10243470-10243489 Msa0756180:CDS 45.0%
AATCGTGATGACAGGGATTG+GGG - chr5_2:10243524-10243543 Msa0756180:CDS 45.0%
!!! AATTATAATTTTGTTTTAAA+AGG - chr5_2:10242365-10242384 Msa0756180:intron 5.0%
TGGATTCGTAGAGAGAGGGA+GGG + chr5_2:10238268-10238287 None:intergenic 50.0%
ATGGATTCGTAGAGAGAGGG+AGG + chr5_2:10238269-10238288 None:intergenic 50.0%
!! GGTGATGGATTCGTAGAGAG+AGG + chr5_2:10238273-10238292 None:intergenic 50.0%
! GGATTGGATTGTGGTGGTGA+TGG + chr5_2:10238288-10238307 None:intergenic 50.0%
GAGGAAGGATTGGATTGTGG+TGG + chr5_2:10238294-10238313 None:intergenic 50.0%
!! TGTTTTTGCGGGAAGAGCGA+CGG + chr5_2:10238373-10238392 None:intergenic 50.0%
!!! TGGTGGTGGTGGTGTTTTTG+CGG + chr5_2:10238385-10238404 None:intergenic 50.0%
ATGCGTTTCGCATCCGAGAA+AGG - chr5_2:10238481-10238500 Msa0756180:CDS 50.0%
GAAATCAACGATTCGCGCTC+CGG + chr5_2:10238635-10238654 None:intergenic 50.0%
GTTGAGTGATCAGCTTGGGA+AGG - chr5_2:10238865-10238884 Msa0756180:CDS 50.0%
! TCAGCTTGGGAAGGAGCTTT+TGG - chr5_2:10238874-10238893 Msa0756180:CDS 50.0%
GTTCGCAGATTCCGTATGGA+CGG - chr5_2:10238906-10238925 Msa0756180:CDS 50.0%
GTATGGACGGAAGTCGATGT+TGG - chr5_2:10238919-10238938 Msa0756180:CDS 50.0%
GTCGATGTTGGAGGCTTATG+GGG - chr5_2:10238931-10238950 Msa0756180:CDS 50.0%
GTGCCAGAAGATTCAAGGAG+TGG - chr5_2:10238980-10238999 Msa0756180:CDS 50.0%
TATGACTTTCGAGGCCTGGT+TGG - chr5_2:10239432-10239451 Msa0756180:intron 50.0%
! GTCTTGGACAGAGCACCTTA+AGG + chr5_2:10240013-10240032 None:intergenic 50.0%
! TAAGGTGCTCTGTCCAAGAC+TGG - chr5_2:10240013-10240032 Msa0756180:intron 50.0%
! AAGGTGCTCTGTCCAAGACT+GGG - chr5_2:10240014-10240033 Msa0756180:intron 50.0%
TGTGTGATTCCTGTAGGTGG+TGG - chr5_2:10240216-10240235 Msa0756180:intron 50.0%
! AGCTACAGGAGGTTGATCAC+TGG + chr5_2:10240269-10240288 None:intergenic 50.0%
! GTTAGCTTCTGAGCTACAGG+AGG + chr5_2:10240280-10240299 None:intergenic 50.0%
TCCCTCAATAGTGCCCATTG+AGG - chr5_2:10240324-10240343 Msa0756180:intron 50.0%
CTCCTCAATGGGCACTATTG+AGG + chr5_2:10240329-10240348 None:intergenic 50.0%
CTCAATAGTGCCCATTGAGG+AGG - chr5_2:10240327-10240346 Msa0756180:intron 50.0%
GCGATTACATGCCTCCTCAA+TGG + chr5_2:10240341-10240360 None:intergenic 50.0%
TGCAAGTATGCCATCTCGGA+AGG - chr5_2:10240406-10240425 Msa0756180:intron 50.0%
TTTAGACGCTCCTTCCGAGA+TGG + chr5_2:10240419-10240438 None:intergenic 50.0%
CTCACTGCAGAGAAAGTGGA+AGG - chr5_2:10240595-10240614 Msa0756180:CDS 50.0%
! ATAGGCAGCCTTATGCAGCA+GGG + chr5_2:10240845-10240864 None:intergenic 50.0%
GTAGCTGTAACACTGTGGGA+TGG + chr5_2:10240898-10240917 None:intergenic 50.0%
TGCTTCAGCATGAGGATACC+AGG - chr5_2:10241040-10241059 Msa0756180:CDS 50.0%
CAACCGTCATTTGCAGAGCA+AGG + chr5_2:10241194-10241213 None:intergenic 50.0%
AGGAGCAAAACACATGGCAG+TGG + chr5_2:10242832-10242851 None:intergenic 50.0%
! GTGATACTGACTGATTCCGG+TGG - chr5_2:10243017-10243036 Msa0756180:CDS 50.0%
!!! GCCTGATGTAGTTTTGGCAC+TGG - chr5_2:10243166-10243185 Msa0756180:CDS 50.0%
CCCAGTGCCAAAACTACATC+AGG + chr5_2:10243170-10243189 None:intergenic 50.0%
!! CACTGCAGAGAGCACAGTTT+TGG + chr5_2:10243291-10243310 None:intergenic 50.0%
GTGCTCTCTGCAGTGAATGA+AGG - chr5_2:10243296-10243315 Msa0756180:CDS 50.0%
AGGGGTTGCTTGAACCTCTT+TGG - chr5_2:10243648-10243667 Msa0756180:CDS 50.0%
! GGGAGGGGTTTGGGGATTTT+TGG + chr5_2:10238339-10238358 None:intergenic 55.0%
!!! GGTGGTGGTGGTGTTTTTGC+GGG + chr5_2:10238384-10238403 None:intergenic 55.0%
TGATTGGGAACTGGGTTCGG+TGG + chr5_2:10238405-10238424 None:intergenic 55.0%
TGGACGGAAGTCGATGTTGG+AGG - chr5_2:10238922-10238941 Msa0756180:CDS 55.0%
!! TGAGGCATCGGGATCCTCAA+GGG + chr5_2:10239724-10239743 None:intergenic 55.0%
!! TTGAGGCATCGGGATCCTCA+AGG + chr5_2:10239725-10239744 None:intergenic 55.0%
GGATCCCGATGCCTCAAAAG+AGG - chr5_2:10239728-10239747 Msa0756180:CDS 55.0%
CATCGAGAACCACCACCTAC+AGG + chr5_2:10240228-10240247 None:intergenic 55.0%
! GATAGGCAGCCTTATGCAGC+AGG + chr5_2:10240846-10240865 None:intergenic 55.0%
GGCCCTTGCTCTGCAAATGA+CGG - chr5_2:10241188-10241207 Msa0756180:CDS 55.0%
GCTGGGTACCCAAGTAATGG+AGG - chr5_2:10242189-10242208 Msa0756180:intron 55.0%
TTGTTGCAGCCGCAAAGCCT+TGG - chr5_2:10243141-10243160 Msa0756180:CDS 55.0%
ATCAGGCAGCCAAGGCTTTG+CGG + chr5_2:10243153-10243172 None:intergenic 55.0%
TTTGCGGGAAGAGCGACGGA+GGG + chr5_2:10238369-10238388 None:intergenic 60.0%
! TTTTGCGGGAAGAGCGACGG+AGG + chr5_2:10238370-10238389 None:intergenic 60.0%
!! TTGGGAACTGGGTTCGGTGG+TGG + chr5_2:10238402-10238421 None:intergenic 60.0%
!! AGGCATCGGGATCCTCAAGG+GGG + chr5_2:10239722-10239741 None:intergenic 60.0%
!! GAGGCATCGGGATCCTCAAG+GGG + chr5_2:10239723-10239742 None:intergenic 60.0%
CGAGCACGTGCTCAACTGCT+TGG - chr5_2:10242011-10242030 Msa0756180:CDS 60.0%
!! ACTGGGTTCGGTGGTGGTGG+TGG + chr5_2:10238396-10238415 None:intergenic 65.0%
!! GGAACTGGGTTCGGTGGTGG+TGG + chr5_2:10238399-10238418 None:intergenic 65.0%
GTGGCGGTGGGAGGGGTTTG+GGG + chr5_2:10238347-10238366 None:intergenic 70.0%
! GGTGGCGGTGGGAGGGGTTT+GGG + chr5_2:10238348-10238367 None:intergenic 70.0%
GGAAGAGCGACGGAGGGTGG+CGG + chr5_2:10238363-10238382 None:intergenic 70.0%
! GGGTGGCGGTGGGAGGGGTT+TGG + chr5_2:10238349-10238368 None:intergenic 75.0%
! ACGGAGGGTGGCGGTGGGAG+GGG + chr5_2:10238354-10238373 None:intergenic 75.0%
! GACGGAGGGTGGCGGTGGGA+GGG + chr5_2:10238355-10238374 None:intergenic 75.0%
! GAGCGACGGAGGGTGGCGGT+GGG + chr5_2:10238359-10238378 None:intergenic 75.0%
! AGAGCGACGGAGGGTGGCGG+TGG + chr5_2:10238360-10238379 None:intergenic 75.0%
GCGGGAAGAGCGACGGAGGG+TGG + chr5_2:10238366-10238385 None:intergenic 75.0%
!! CGACGGAGGGTGGCGGTGGG+AGG + chr5_2:10238356-10238375 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 10238119 10243724 10238119 ID=Msa0756180;Name=Msa0756180
chr5_2 mRNA 10238119 10243724 10238119 ID=Msa0756180-mRNA-1;Parent=Msa0756180;Name=Msa0756180-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.5|0.2|1|1|1|5|0|1260
chr5_2 exon 10242666 10243724 10242666 ID=Msa0756180-mRNA-1:exon:4703;Parent=Msa0756180-mRNA-1
chr5_2 exon 10241713 10242177 10241713 ID=Msa0756180-mRNA-1:exon:4702;Parent=Msa0756180-mRNA-1
chr5_2 exon 10240547 10241611 10240547 ID=Msa0756180-mRNA-1:exon:4701;Parent=Msa0756180-mRNA-1
chr5_2 exon 10239633 10239852 10239633 ID=Msa0756180-mRNA-1:exon:4700;Parent=Msa0756180-mRNA-1
chr5_2 exon 10238119 10239092 10238119 ID=Msa0756180-mRNA-1:exon:4699;Parent=Msa0756180-mRNA-1
chr5_2 CDS 10242666 10243724 10242666 ID=Msa0756180-mRNA-1:cds;Parent=Msa0756180-mRNA-1
chr5_2 CDS 10241713 10242177 10241713 ID=Msa0756180-mRNA-1:cds;Parent=Msa0756180-mRNA-1
chr5_2 CDS 10240547 10241611 10240547 ID=Msa0756180-mRNA-1:cds;Parent=Msa0756180-mRNA-1
chr5_2 CDS 10239633 10239852 10239633 ID=Msa0756180-mRNA-1:cds;Parent=Msa0756180-mRNA-1
chr5_2 CDS 10238119 10239092 10238119 ID=Msa0756180-mRNA-1:cds;Parent=Msa0756180-mRNA-1
Gene Sequence

>Msa0756180

ATGGAGAAGAAGCTTCGTTCATCTCTCAATTCTTCACCACAAGAATTCATCTCTTTAGCCACAACCCTAACCCTAAAATCCTCTAAATCCTCTCTCAAAACCCTAATTCATTCAATCAAACCCTCTTCCAATCTCATTTCTTCACTCCCTCCCTCTCTCTACGAATCCATCACCACCACAATCCAATCCTTCCTCAATCTTCTCGAATCCAACAATTCCAAAAATCCCCAAACCCCTCCCACCGCCACCCTCCGTCGCTCTTCCCGCAAAAACACCACCACCACCACCGAACCCAGTTCCCAATCAGATGAAAAACATAAAATTCTCGAAAAACTTCAAATTCTCGCTCACATTTCGTTTCTATGCGTTTCGCATCCGAGAAAGGTTTTTGATTTTTCTGATTTGCTACCTGGAGTTCAAGCATTGCATGATAATTTGATTGTTTTGGAAGCGGATTCGATTTTGTCTTCGGGGATTGAGACTATATGTGAAGAATGGTGGAAGGAGAATTTACCGGAGCGCGAATCGTTGATTTCTCAGACATTACCTTTTGTTCTATCGAGATCGTTGACATTGAAGAAAAAAGTGGATGTGCATAGGGTTTATATGTTTCGCGAGGCCTTCGCGTTGTTTGACTTCGAAGATGAGAGTATCGAGGATTTGAAACTGTTGTTAAACAGGTGTGTAATTTCGCCTTTATATTTGAAAACAGAAGATGGAAGAAAGTTTCTGGCTTTTTTGTTTGGGTTGAGTGATCAGCTTGGGAAGGAGCTTTTGGCGATGATTCGTTCGCAGATTCCGTATGGACGGAAGTCGATGTTGGAGGCTTATGGGGATATATTGTTTCGAGCATGGAAAGCTGTGCCAGAAGATTCAAGGAGTGGAATTGAGAATGGGTTCTTGCAGGATTTGATTGAGGGTTCTATCCATGCAAGTTCTGGAACTTTTGCTTTGTATATTAGAAGGGTTTTGGGAGGGTTTATTAATCAGAGGACCGTAGATGGGGTTGAGAAACTACTCTATCGACTTGCCGAGCCAGTCATATTTCGGTCTCTGCAGGCTGCAAACTCAAATGTTCGACAGAATGCTTTGCATCTGCTTTTGGACATATTCCCCCTTGAGGATCCCGATGCCTCAAAAGAGGATAAGGATACATTGCTTGATAAGCAGTTCTTTTTGTTAGAAAAGTTGCTTGTTGACGATTGTCCAGAAGTTAGAACAATTGCTGTTGAGGGTTCTTGTCGTGTCCTTCATCTATTTTGGGAAATTATTCCGTCACCAATTATAACAAAGATGCTTACAAAAGTAATTAGTGACATGTCTCATGATGTATGCAACGAGGTAAGGCTTTCTACGTTGAATGGCATCATTTATTTGCTTGACAATCCCCACTCTCATGAAGTCCTTAAGGTGCTCTGTCCAAGACTGGGTCACTTAATGCTGGATAATATCCTCACAGTACAAGTTGCTATGGCAGAGCTCTTGCTCCATCTAAATGATATTCAAAATTTTCAGTTTAACAAGGTGGTGGTTCTCGATGTGCTTTTGTCTGTGCTTGCCAGTGATCAACCTCCTGTAGCTCAGAAGCTAACAAAACTGCTTATACCTTCGTACTTTCCCTCAATAGTGCCCATTGAGGAGGCATGTAATCGCTGCATTACACTAGTAAAAAGGTCTCCAATGGCCGGTGCAATATTTTGCAAGTATGCCATCTCGGAAGGAGCGTCTAAAACTCATCTTATGGAACTGGTCAAAGCATTCCTGAGTTTGGTTTTGTCACAAGATAAGCTGAATGCAGATCAGATAGAGGGCTTTCTTATTGCTGCTAGCTATCTTTGTGATAACTTAGTCAGTGAACCATGCTATATGGATGCCCTCAAAGAGTTACTCACTGCAGAGAAAGTGGAAGGTTTACTAACTGGGGCATCTACAGAACAAGCTCAATCATCTTTATTCAACATTTTCTCCACTGTTTGTCCAGATAATGTGGCAGGACTTCTTGAAGAGTGCATGAGTGTTGTCACAAACTGCCATGGTTTACCTGAAGATGTTGATCGCCAATCTAAAATTAGGTCTGCACATAAGTTGTTGCTTTCTTTGGGAGGTTTTGATGACATGTTTGAAGCCTTAACAACCCTGCTGCATAAGGCTGCCTATCGTTGTCACATTAAATTTGGGGCAGACATGCCATCCCACAGTGTTACAGCTACTAAAAGGAAAAAATCTAAATCCTCTGGAAAATTTTCAATTAAATCGAAGATAATTAACAGAAAGCAATCTTTTGAAGATGATTATTTAGTAGCTGTAGGAGTTGCATGGCAAGTTAGAGACTTGCTTCAGCATGAGGATACCAGGAAAGCAATCTTTAGATCTCAACCTTTAGAAATGTTGTTTTTTTCGCTTAAGATGGTATCTGAAGTCAGCATTGAGCATTGTGGGCAGTATGAATACATAGACATATCTCCTGTTTTGGCATATATGGCCCTTGCTCTGCAAATGACGGTTGATAATGTTGGCACAAGTAGTGAAAAGAATGGTGATTCCAAGGGGAAGAAAACTAAGATTGATTCTTCTACATTACTTTCAGAGACTGTATTGGATCTGACAATCGAGCACGTGCTCAACTGCTTGGAAAAACTATTTGGATCAGATGACACTGTACAATATCACAATGTGGATTCACATAACTTGGAGTCAACAACTGGGAAAAATCGAAGTTCCAAAAAAAGGAAGAAAACAGGGAAAAATCAAAATTCCACAAAAAGGCGAAGGCTATCTCTGACAAATGCTGGGTACCCAAGTAATGGAGGATCTGTACACAATGAACCTCGACAAGTGCTTTGTAAGGTGAAGATGATTACTGCTGTTCTGAAGTTCATGGCTGATGCCACTGCCATGTGTTTTGCTCCTCACAACAATGGATTATTCTTGAATAATACCTCAAAATGCATACAACATATCTTGTCTTCATTGAACCAGCTGTATCATCACAGAATTGAATTTGAGGAAGAGGATAAAAAAAATACTATATTTTGCCTGAAAAGCTCTTTCAGCTATGCTGCAAAAATACTCAATGTGATACTGACTGATTCCGGTGGATCCTCCATAATGACATCAAAAGCCTTCACTCTTGCCAATAACTTGCTTGATTTAATTGTTTCAACTGAATCATGTTTGGGCTCTGCATATGCATCACGTCTTGTTGCAGCCGCAAAGCCTTGGCTGCCTGATGTAGTTTTGGCACTGGGATCTGAAAGTGTTCTACAACACACCGAAAGTGGAAGTGAACATTTAACTGCTTCTGAACAAATGAAGTTACAATTTCCAAAATGGCCCTTGATTGTAGCCAAAACTGTGCTCTCTGCAGTGAATGAAGGTGAAGGAGATGGTGAATGCTCTCAACCAGATAAATTCTCGACATTCAATAAACTTACGGCTATGCTGGTTATATTACTTAAAAAGAATAAGAGTATAATGGATGCAGTTGGGGATATTTTCTTGGTTTGTTCACTTGTTGGGCTAGAACAAAAGGACTTTGAGCTGGCATTAGGACTCTTGCAGTTTGTATGTTCCAAGTTGTTTAATCGTGATGACAGGGATTGGGGTGACATGATGTTATCTTCTCTGGAAGAAATCTATCATAAGATAGAGAGGCAAATTACAGAAGCTAGTAATAACGATGAACTGGAGAAATTGATGCATGTAAAGGGGTTGCTTGAACCTCTTTGGACGTATCATCTATATGAAACTGGAAAGGTCAACATGACTGATGACTATAATTAG

Protein sequence

>Msa0756180

MEKKLRSSLNSSPQEFISLATTLTLKSSKSSLKTLIHSIKPSSNLISSLPPSLYESITTTIQSFLNLLESNNSKNPQTPPTATLRRSSRKNTTTTTEPSSQSDEKHKILEKLQILAHISFLCVSHPRKVFDFSDLLPGVQALHDNLIVLEADSILSSGIETICEEWWKENLPERESLISQTLPFVLSRSLTLKKKVDVHRVYMFREAFALFDFEDESIEDLKLLLNRCVISPLYLKTEDGRKFLAFLFGLSDQLGKELLAMIRSQIPYGRKSMLEAYGDILFRAWKAVPEDSRSGIENGFLQDLIEGSIHASSGTFALYIRRVLGGFINQRTVDGVEKLLYRLAEPVIFRSLQAANSNVRQNALHLLLDIFPLEDPDASKEDKDTLLDKQFFLLEKLLVDDCPEVRTIAVEGSCRVLHLFWEIIPSPIITKMLTKVISDMSHDVCNEVRLSTLNGIIYLLDNPHSHEVLKVLCPRLGHLMLDNILTVQVAMAELLLHLNDIQNFQFNKVVVLDVLLSVLASDQPPVAQKLTKLLIPSYFPSIVPIEEACNRCITLVKRSPMAGAIFCKYAISEGASKTHLMELVKAFLSLVLSQDKLNADQIEGFLIAASYLCDNLVSEPCYMDALKELLTAEKVEGLLTGASTEQAQSSLFNIFSTVCPDNVAGLLEECMSVVTNCHGLPEDVDRQSKIRSAHKLLLSLGGFDDMFEALTTLLHKAAYRCHIKFGADMPSHSVTATKRKKSKSSGKFSIKSKIINRKQSFEDDYLVAVGVAWQVRDLLQHEDTRKAIFRSQPLEMLFFSLKMVSEVSIEHCGQYEYIDISPVLAYMALALQMTVDNVGTSSEKNGDSKGKKTKIDSSTLLSETVLDLTIEHVLNCLEKLFGSDDTVQYHNVDSHNLESTTGKNRSSKKRKKTGKNQNSTKRRRLSLTNAGYPSNGGSVHNEPRQVLCKVKMITAVLKFMADATAMCFAPHNNGLFLNNTSKCIQHILSSLNQLYHHRIEFEEEDKKNTIFCLKSSFSYAAKILNVILTDSGGSSIMTSKAFTLANNLLDLIVSTESCLGSAYASRLVAAAKPWLPDVVLALGSESVLQHTESGSEHLTASEQMKLQFPKWPLIVAKTVLSAVNEGEGDGECSQPDKFSTFNKLTAMLVILLKKNKSIMDAVGDIFLVCSLVGLEQKDFELALGLLQFVCSKLFNRDDRDWGDMMLSSLEEIYHKIERQITEASNNDELEKLMHVKGLLEPLWTYHLYETGKVNMTDDYN*