AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0577450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577450 MtrunA17_Chr8g0377731 91.308 1162 47 7 1 1112 1 1158 0.0 2145
Msa0577450 MtrunA17_Chr3g0122121 62.592 1219 321 20 20 1112 37 1246 0.0 1418
Msa0577450 MtrunA17_Chr3g0101021 33.446 1181 601 29 2 1103 22 1096 6.88e-172 535
Msa0577450 MtrunA17_Chr5g0445211 33.361 1223 615 31 2 1103 6 1149 4.58e-165 518
Msa0577450 MtrunA17_Chr4g0045381 42.993 421 172 10 54 420 193 599 2.01e-85 305
Msa0577450 MtrunA17_Chr4g0045381 33.562 146 97 0 657 802 621 766 1.91e-15 82.0
Msa0577450 MtrunA17_Chr4g0069141 41.146 384 168 7 52 383 151 528 4.06e-80 289
Msa0577450 MtrunA17_Chr4g0069141 31.016 187 118 2 645 821 566 751 3.06e-13 74.7
Msa0577450 MtrunA17_Chr2g0322291 41.425 379 164 7 52 378 86 458 8.97e-79 283
Msa0577450 MtrunA17_Chr4g0053211 32.170 401 177 11 55 373 13 400 8.62e-46 179
Msa0577450 MtrunA17_Chr1g0182151 31.325 415 197 12 28 377 33 424 1.56e-42 169
Msa0577450 MtrunA17_Chr1g0178411 31.122 392 191 10 55 381 14 391 1.73e-42 169
Msa0577450 MtrunA17_Chr1g0152231 30.569 422 212 10 57 425 6 399 2.52e-42 167
Msa0577450 MtrunA17_Chr7g0266631 31.378 392 190 10 55 381 10 387 1.42e-41 166
Msa0577450 MtrunA17_Chr3g0132921 29.925 401 194 10 49 380 4 386 8.32e-41 158
Msa0577450 MtrunA17_Chr2g0327581 30.256 390 192 9 55 381 50 422 1.11e-40 163
Msa0577450 MtrunA17_Chr1g0153061 30.750 400 186 11 52 373 6 392 1.52e-40 162
Msa0577450 MtrunA17_Chr1g0193221 33.166 398 196 12 55 403 4 380 2.03e-40 162
Msa0577450 MtrunA17_Chr5g0427481 29.716 387 194 9 83 404 49 422 1.28e-39 160
Msa0577450 MtrunA17_Chr3g0134191 30.151 398 185 10 55 373 9 392 4.91e-39 157
Msa0577450 MtrunA17_Chr1g0192481 32.447 376 185 10 55 377 59 418 3.08e-38 152
Msa0577450 MtrunA17_Chr3g0145071 30.130 385 197 11 43 377 88 450 4.31e-38 155
Msa0577450 MtrunA17_Chr8g0369881 30.914 372 184 11 55 375 876 1225 1.98e-37 153
Msa0577450 MtrunA17_Chr1g0195111 30.585 376 187 8 55 375 397 753 1.46e-36 150
Msa0577450 MtrunA17_Chr4g0035661 30.000 380 193 12 48 377 84 440 2.07e-36 149
Msa0577450 MtrunA17_Chr3g0102921 29.273 509 269 18 53 494 437 921 4.13e-36 149
Msa0577450 MtrunA17_Chr2g0280421 31.579 361 170 11 39 342 423 763 9.53e-36 146
Msa0577450 MtrunA17_Chr2g0319271 31.956 363 151 11 55 344 400 739 3.88e-35 144
Msa0577450 MtrunA17_Chr5g0407791 30.769 325 165 7 92 375 934 1239 5.10e-35 145
Msa0577450 MtrunA17_Chr5g0405181 30.971 381 212 12 55 393 21 392 1.10e-34 144
Msa0577450 MtrunA17_Chr7g0271961 30.831 373 185 12 55 375 402 753 2.09e-34 143
Msa0577450 MtrunA17_Chr4g0049011 30.239 377 172 12 39 346 265 619 2.20e-34 140
Msa0577450 MtrunA17_Chr2g0307481 29.314 423 205 14 24 375 38 437 5.05e-34 139
Msa0577450 MtrunA17_Chr7g0258991 28.496 379 189 12 55 377 74 426 5.29e-34 141
Msa0577450 MtrunA17_Chr5g0447041 26.102 567 308 18 55 528 435 983 6.83e-34 141
Msa0577450 MtrunA17_Chr4g0042061 30.952 378 165 12 39 344 418 771 9.13e-34 140
Msa0577450 MtrunA17_Chr4g0062291 31.198 359 163 10 53 349 122 458 2.92e-33 138
Msa0577450 MtrunA17_Chr4g0036001 29.474 380 216 9 55 394 25 392 1.50e-32 136
Msa0577450 MtrunA17_Chr8g0372171 29.888 358 186 8 78 393 56 390 8.15e-32 134
Msa0577450 MtrunA17_Chr5g0398521 29.268 410 197 14 11 347 13 402 1.15e-31 134
Msa0577450 MtrunA17_Chr1g0191851 31.921 354 166 13 55 354 148 480 1.90e-31 132
Msa0577450 MtrunA17_Chr6g0483701 28.767 365 214 6 55 383 31 385 1.07e-30 130
Msa0577450 MtrunA17_Chr2g0312631 30.347 346 165 12 55 345 385 709 1.07e-30 131
Msa0577450 MtrunA17_Chr7g0245931 29.126 412 207 14 12 353 6 402 2.68e-29 126
Msa0577450 MtrunA17_Chr3g0142261 32.063 315 175 9 90 377 67 369 4.13e-29 126
Msa0577450 MtrunA17_Chr6g0485471 29.326 341 173 10 55 345 116 438 7.67e-29 124
Msa0577450 MtrunA17_Chr5g0411971 28.933 356 173 10 90 387 444 777 2.47e-28 123
Msa0577450 MtrunA17_Chr4g0070001 27.970 404 220 11 7 354 82 470 2.52e-28 123
Msa0577450 MtrunA17_Chr7g0257301 27.649 387 204 9 55 373 393 771 2.55e-28 123
Msa0577450 MtrunA17_Chr2g0331761 27.778 378 203 11 18 345 151 508 4.97e-28 121
Msa0577450 MtrunA17_Chr7g0272871 30.056 356 170 13 55 354 128 460 5.25e-28 121
Msa0577450 MtrunA17_Chr1g0191181 28.902 346 174 9 55 347 89 415 7.66e-28 120
Msa0577450 MtrunA17_Chr5g0421591 31.104 299 142 8 90 345 419 696 2.22e-27 120
Msa0577450 MtrunA17_Chr5g0421521 28.933 356 173 10 90 387 419 752 2.42e-27 120
Msa0577450 MtrunA17_Chr7g0238581 27.749 382 186 15 23 347 5 353 8.09e-26 114
Msa0577450 MtrunA17_Chr3g0122291 72.131 61 17 0 665 725 1 61 2.97e-23 94.0
Msa0577450 MtrunA17_Chr8g0367581 28.165 387 197 14 37 374 131 485 9.21e-23 105
Msa0577450 MtrunA17_Chr7g0269681 33.624 229 119 4 173 375 2 223 2.47e-22 102
Msa0577450 MtrunA17_Chr3g0122271 56.627 83 31 1 902 984 1 78 6.05e-21 88.6
Msa0577450 MtrunA17_Chr8g0386891 33.333 189 95 3 212 375 4 186 6.78e-20 94.0
Msa0577450 MtrunA17_Chr8g0390981 37.398 123 60 4 55 168 516 630 6.71e-14 76.3
Msa0577450 MtrunA17_Chr8g0390991 31.863 204 91 6 212 378 1 193 9.45e-14 75.5
Msa0577450 MtrunA17_Chr6g0484501 32.161 199 104 3 200 373 22 214 2.57e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577450 AT3G23670.1 51.274 667 293 11 462 1112 663 1313 0.0 620
Msa0577450 AT3G23670.1 59.000 500 122 10 10 428 23 520 4.16e-168 531
Msa0577450 AT4G14150.1 52.545 668 290 7 451 1112 646 1292 0.0 609
Msa0577450 AT4G14150.1 57.171 516 129 13 3 428 1 514 9.15e-164 519
Msa0577450 AT3G23670.2 59.000 500 122 10 10 428 23 520 7.07e-172 531
Msa0577450 AT3G23670.2 54.706 340 131 7 780 1112 648 971 4.02e-99 337
Msa0577450 AT3G20150.1 31.566 1207 535 33 10 1063 33 1101 6.55e-136 440
Msa0577450 AT3G20150.2 31.493 1159 504 32 10 1015 33 1054 2.38e-133 432
Msa0577450 AT3G19050.1 44.022 368 148 7 52 367 191 552 1.96e-82 296
Msa0577450 AT3G19050.1 39.161 143 87 0 650 792 618 760 9.10e-21 100
Msa0577450 AT3G17360.1 41.667 384 166 7 42 373 156 533 4.03e-78 283
Msa0577450 AT3G17360.1 31.298 131 90 0 657 787 584 714 3.62e-12 71.6
Msa0577450 AT3G17360.3 41.667 384 166 7 42 373 156 533 4.20e-78 283
Msa0577450 AT3G17360.3 31.298 131 90 0 657 787 584 714 3.72e-12 71.6
Msa0577450 AT3G17360.2 41.667 384 166 7 42 373 156 533 4.63e-78 283
Msa0577450 AT3G17360.2 31.298 131 90 0 657 787 592 722 3.63e-12 71.6
Msa0577450 AT3G44050.1 41.732 381 164 7 52 380 91 465 2.17e-74 270
Msa0577450 AT5G55520.1 29.502 783 379 22 322 1056 92 749 6.41e-62 227
Msa0577450 AT5G55520.2 29.135 786 374 22 322 1056 92 745 1.17e-60 223
Msa0577450 AT4G26660.1 28.734 790 397 25 325 1067 96 766 5.86e-59 218
Msa0577450 AT3G63480.2 34.084 311 144 8 90 354 48 343 8.32e-43 163
Msa0577450 AT2G37420.1 31.579 418 198 13 30 377 18 417 2.12e-42 169
Msa0577450 AT2G37420.2 31.579 418 198 13 30 377 18 417 2.12e-42 169
Msa0577450 AT5G60930.3 32.507 363 158 9 85 373 40 389 2.17e-42 169
Msa0577450 AT2G28620.1 31.105 389 190 9 55 381 51 423 2.48e-42 169
Msa0577450 AT2G28620.3 31.105 389 190 9 55 381 51 423 2.52e-42 169
Msa0577450 AT2G28620.2 31.105 389 190 9 55 381 51 423 2.52e-42 169
Msa0577450 AT5G60930.2 31.139 395 184 10 55 373 7 389 2.64e-42 169
Msa0577450 AT2G36200.1 31.296 409 184 12 47 381 5 390 2.72e-42 169
Msa0577450 AT5G60930.1 32.507 363 158 9 85 373 40 389 3.71e-42 169
Msa0577450 AT2G36200.2 31.296 409 184 12 47 381 5 390 4.30e-42 168
Msa0577450 AT3G45850.2 31.969 391 184 10 55 381 56 428 6.25e-42 167
Msa0577450 AT3G45850.1 31.969 391 184 10 55 381 56 428 6.25e-42 167
Msa0577450 AT3G63480.1 33.968 315 143 10 90 354 48 347 1.06e-41 160
Msa0577450 AT5G47820.2 30.414 411 190 12 52 380 9 405 2.43e-41 166
Msa0577450 AT5G47820.1 30.414 411 190 12 52 380 9 405 2.43e-41 166
Msa0577450 AT1G59540.1 31.111 405 218 9 57 419 6 391 6.58e-41 163
Msa0577450 AT4G39050.1 30.905 398 202 12 30 377 75 449 7.21e-41 164
Msa0577450 AT3G10180.1 31.783 387 186 9 55 388 4 365 2.33e-39 160
Msa0577450 AT3G10180.2 31.783 387 186 9 55 388 4 365 2.35e-39 159
Msa0577450 AT3G50240.4 30.326 399 183 12 55 373 26 409 3.27e-39 159
Msa0577450 AT3G50240.1 30.326 399 183 12 55 373 26 409 3.56e-39 159
Msa0577450 AT3G50240.2 30.326 399 183 12 55 373 26 409 4.35e-39 158
Msa0577450 AT5G06670.8 29.280 403 207 11 28 383 53 424 4.92e-39 156
Msa0577450 AT5G06670.4 29.280 403 207 11 28 383 53 424 4.92e-39 156
Msa0577450 AT5G06670.7 29.280 403 207 11 28 383 53 424 4.92e-39 156
Msa0577450 AT5G06670.5 29.280 403 207 11 28 383 53 424 5.98e-39 156
Msa0577450 AT5G06670.2 29.280 403 207 11 28 383 53 424 7.00e-39 157
Msa0577450 AT5G06670.3 29.280 403 207 11 28 383 53 424 7.00e-39 157
Msa0577450 AT3G10310.2 32.796 372 179 15 55 373 364 717 3.13e-37 152
Msa0577450 AT3G12020.4 28.989 376 199 10 51 377 66 422 4.16e-37 152
Msa0577450 AT3G12020.1 28.989 376 199 10 51 377 66 422 4.16e-37 152
Msa0577450 AT3G10310.1 32.796 372 179 15 55 373 364 717 4.33e-37 152
Msa0577450 AT2G21380.2 29.551 379 195 11 49 377 99 455 7.51e-37 151
Msa0577450 AT2G21380.1 29.551 379 195 11 49 377 99 455 7.51e-37 151
Msa0577450 AT3G12020.3 29.459 370 205 10 51 377 66 422 1.46e-36 150
Msa0577450 AT3G12020.2 29.459 370 205 10 51 377 66 422 1.46e-36 150
Msa0577450 AT1G63640.2 29.136 405 215 12 55 404 473 860 1.51e-36 150
Msa0577450 AT1G18410.1 31.880 367 187 14 55 375 633 982 1.54e-36 150
Msa0577450 AT5G41310.1 30.312 353 193 9 55 371 423 758 1.98e-36 149
Msa0577450 AT5G06670.6 28.641 412 207 12 28 383 53 433 1.98e-36 150
Msa0577450 AT5G06670.1 28.641 412 207 12 28 383 53 433 1.98e-36 150
Msa0577450 AT1G21730.1 29.032 372 196 9 55 377 76 428 2.95e-36 149
Msa0577450 AT1G73860.1 30.585 376 189 12 55 375 510 868 4.31e-36 149
Msa0577450 AT1G18410.3 30.933 375 188 14 55 375 490 847 7.81e-36 148
Msa0577450 AT1G18410.2 30.933 375 188 14 55 375 490 847 7.81e-36 148
Msa0577450 AT1G73860.2 30.585 376 189 12 55 375 427 785 9.39e-36 147
Msa0577450 AT5G54670.3 31.183 372 169 11 39 344 322 672 9.42e-36 146
Msa0577450 AT1G09170.5 32.527 372 184 9 55 375 435 790 1.01e-35 147
Msa0577450 AT5G54670.1 31.183 372 169 11 39 344 382 732 1.35e-35 146
Msa0577450 AT5G54670.2 31.183 372 169 11 39 344 382 732 1.35e-35 146
Msa0577450 AT1G18410.4 30.933 375 188 14 55 375 633 990 1.38e-35 147
Msa0577450 AT1G09170.4 32.527 372 184 9 55 375 435 790 1.46e-35 146
Msa0577450 AT4G27180.1 31.903 373 165 12 39 344 373 723 1.50e-35 145
Msa0577450 AT4G27180.2 31.903 373 165 12 39 344 373 723 1.50e-35 145
Msa0577450 AT1G09170.3 31.903 373 180 10 55 376 435 784 1.83e-35 146
Msa0577450 AT1G09170.7 31.903 373 180 10 55 376 435 784 1.83e-35 146
Msa0577450 AT4G05190.1 30.933 375 170 10 39 344 414 768 1.84e-35 145
Msa0577450 AT1G18410.5 31.351 370 189 15 55 376 480 832 1.97e-35 146
Msa0577450 AT1G63640.3 28.641 412 215 12 55 404 473 867 2.30e-35 146
Msa0577450 AT1G63640.5 28.641 412 215 12 55 404 463 857 2.30e-35 146
Msa0577450 AT1G63640.1 28.641 412 215 12 55 404 473 867 2.50e-35 146
Msa0577450 AT1G63640.4 28.641 412 215 12 55 404 473 867 2.50e-35 146
Msa0577450 AT1G09170.2 32.527 372 184 9 55 375 435 790 2.68e-35 145
Msa0577450 AT2G47500.1 30.749 374 187 9 55 375 400 754 2.93e-35 146
Msa0577450 AT2G47500.2 30.749 374 187 9 55 375 400 754 3.35e-35 145
Msa0577450 AT4G05190.2 30.933 375 170 10 39 344 401 755 3.36e-35 145
Msa0577450 AT5G27000.1 31.806 371 189 10 55 375 395 751 4.66e-35 145
Msa0577450 AT1G09170.1 33.053 357 166 10 55 375 435 754 6.34e-35 145
Msa0577450 AT5G65930.1 32.660 297 141 7 92 347 932 1210 1.26e-34 144
Msa0577450 AT5G65930.2 32.660 297 141 7 92 347 933 1211 1.37e-34 144
Msa0577450 AT5G65930.3 32.660 297 141 7 92 347 939 1217 1.57e-34 144
Msa0577450 AT4G21270.1 30.133 375 173 10 39 344 417 771 9.28e-34 140
Msa0577450 AT2G22610.3 29.765 383 200 10 40 372 404 767 2.86e-33 140
Msa0577450 AT2G22610.1 29.765 383 200 10 40 372 403 766 2.98e-33 140
Msa0577450 AT2G22610.2 29.765 383 200 10 40 372 403 766 3.28e-33 139
Msa0577450 AT3G44730.2 30.526 380 182 12 55 378 423 776 2.06e-32 137
Msa0577450 AT3G44730.3 30.526 380 182 12 55 378 423 776 2.06e-32 137
Msa0577450 AT3G44730.1 30.526 380 182 12 55 378 378 731 2.27e-32 137
Msa0577450 AT3G44730.4 30.526 380 182 12 55 378 378 731 2.27e-32 137
Msa0577450 AT5G66310.2 29.716 387 213 12 55 399 19 388 1.51e-31 134
Msa0577450 AT5G66310.3 29.716 387 213 12 55 399 19 388 1.51e-31 134
Msa0577450 AT5G66310.1 29.716 387 213 12 55 399 19 388 1.51e-31 134
Msa0577450 AT3G51150.1 30.831 373 198 14 55 383 18 374 2.43e-31 133
Msa0577450 AT3G51150.2 30.831 373 198 14 55 383 18 374 2.56e-31 133
Msa0577450 AT3G51150.4 30.831 373 198 14 55 383 18 374 2.56e-31 133
Msa0577450 AT3G51150.3 30.831 373 198 14 55 383 18 374 2.56e-31 133
Msa0577450 AT2G21300.2 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577450 AT2G21300.4 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577450 AT2G21300.3 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577450 AT2G21300.1 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577450 AT2G21300.5 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577450 AT4G24170.1 31.003 329 189 7 90 390 50 368 1.26e-30 131
Msa0577450 AT4G24170.2 31.003 329 189 7 90 390 50 368 1.26e-30 131
Msa0577450 AT1G55550.1 30.836 347 157 12 55 345 92 411 1.99e-30 130
Msa0577450 AT1G18550.1 31.129 363 157 13 50 346 147 482 2.42e-30 129
Msa0577450 AT4G38950.3 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577450 AT4G38950.5 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577450 AT4G38950.4 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577450 AT4G38950.1 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577450 AT4G38950.2 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577450 AT3G54870.1 31.034 348 161 13 66 353 121 449 2.91e-30 130
Msa0577450 AT3G54870.3 31.034 348 161 13 66 353 121 449 2.98e-30 130
Msa0577450 AT3G54870.2 31.034 348 161 13 66 353 121 449 3.90e-30 129
Msa0577450 AT5G27550.2 32.343 303 139 11 90 347 177 458 3.93e-30 129
Msa0577450 AT5G27550.1 32.343 303 139 11 90 347 177 458 3.93e-30 129
Msa0577450 AT1G72250.2 29.067 375 189 11 55 373 501 854 4.29e-30 129
Msa0577450 AT1G18370.1 27.882 373 219 8 50 384 27 387 4.31e-30 129
Msa0577450 AT1G72250.4 29.067 375 189 11 55 373 512 865 5.13e-30 129
Msa0577450 AT1G72250.3 29.067 375 189 11 55 373 513 866 5.18e-30 129
Msa0577450 AT1G72250.1 29.067 375 189 11 55 373 492 845 5.65e-30 129
Msa0577450 AT1G59540.2 35.433 254 129 5 192 419 55 299 7.88e-30 127
Msa0577450 AT3G50240.3 30.503 318 134 9 130 373 3 307 9.64e-30 128
Msa0577450 AT5G27950.1 29.052 327 162 8 86 364 115 419 1.56e-29 126
Msa0577450 AT1G01950.2 27.937 383 197 11 38 353 40 410 9.32e-28 122
Msa0577450 AT1G01950.1 27.937 383 197 11 38 353 40 410 9.59e-28 122
Msa0577450 AT1G12430.2 29.282 362 181 11 55 353 71 420 1.14e-27 121
Msa0577450 AT1G12430.1 29.282 362 181 11 55 353 71 420 1.22e-27 121
Msa0577450 AT1G01950.3 27.937 383 197 11 38 353 40 410 1.56e-27 121
Msa0577450 AT3G43210.3 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577450 AT3G43210.5 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577450 AT3G43210.2 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577450 AT3G43210.4 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577450 AT3G43210.1 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577450 AT1G09170.6 31.494 308 144 9 55 311 435 726 1.13e-25 114
Msa0577450 AT1G09170.8 31.494 308 144 9 55 311 435 726 1.13e-25 114
Msa0577450 AT3G16060.1 27.174 368 184 12 55 364 170 511 1.41e-25 114
Msa0577450 AT3G16630.2 27.933 358 166 13 55 345 194 526 6.22e-25 112
Msa0577450 AT3G16630.1 27.933 358 166 13 55 345 194 526 6.22e-25 112
Msa0577450 AT3G49650.1 30.225 311 141 9 120 379 95 380 1.26e-24 111
Msa0577450 AT5G02370.1 27.027 370 186 13 38 352 7 347 1.28e-23 107
Msa0577450 AT5G65460.3 28.974 390 210 13 37 377 123 494 3.43e-22 104
Msa0577450 AT3G51150.5 34.742 213 99 7 201 383 19 221 6.31e-22 103
Msa0577450 AT5G65460.1 28.718 390 204 13 37 377 123 487 9.33e-22 102
Msa0577450 AT5G65460.2 28.718 390 204 13 37 377 123 487 9.70e-22 102
Msa0577450 AT5G65460.4 28.718 390 204 13 37 377 123 487 9.91e-22 102
Msa0577450 AT5G65460.6 28.718 390 204 13 37 377 123 487 1.48e-21 102
Msa0577450 AT5G10470.2 27.179 390 195 14 37 373 127 480 3.37e-17 88.2
Msa0577450 AT5G10470.1 27.179 390 195 14 37 373 127 480 3.61e-17 87.8
Msa0577450 AT5G27950.2 27.132 258 130 6 155 364 6 253 1.33e-16 84.3
Msa0577450 AT1G01950.4 29.537 281 133 9 126 353 1 269 1.67e-16 85.5
Msa0577450 AT5G42490.1 28.502 207 107 4 90 278 56 239 1.45e-14 79.3
Msa0577450 AT5G42490.2 28.502 207 107 4 90 278 56 239 1.48e-14 79.3

Find 212 sgRNAs with CRISPR-Local

Find 473 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCAGAATTTCTATGAATT+TGG 0.125394 4_1:+81824565 Msa0577450:CDS
TAAGGAAATTTGAAGCTTTC+AGG 0.147100 4_1:-81823628 None:intergenic
TTGTGCTTATGCGTTGATTT+AGG 0.183501 4_1:-81819116 None:intergenic
GCACTGTCTTCAGTTGATTC+TGG 0.186215 4_1:-81824781 None:intergenic
CAGAGCCATTTCTCTCCTTA+TGG 0.211217 4_1:-81824091 None:intergenic
ACTTTGAGAACTTGCTTCTT+TGG 0.221568 4_1:-81823962 None:intergenic
CACCATTGCAGCGCAGCTTT+TGG 0.243281 4_1:+81823707 Msa0577450:CDS
ATCTTCATCTTCAGAACTTC+TGG 0.244162 4_1:-81824508 None:intergenic
GCTCGAATTGCCGAGAATTC+TGG 0.250931 4_1:-81823321 None:intergenic
ATCAGAATTTCTATGAATTT+GGG 0.252101 4_1:+81824566 Msa0577450:CDS
CAATTTATCAATTTGTTTGT+AGG 0.260681 4_1:-81826458 None:intergenic
TGCACTTCTTACTGCTGTTC+TGG 0.269679 4_1:-81825103 None:intergenic
AATTGATACCCACTTCATTT+AGG 0.269765 4_1:-81819852 None:intergenic
TTTAGAACAGTATGCAGATT+TGG 0.294458 4_1:+81825005 Msa0577450:CDS
TTCCATAGGCAAACGTGATT+TGG 0.297758 4_1:-81826527 None:intergenic
TGTGCTTATGCGTTGATTTA+GGG 0.298827 4_1:-81819115 None:intergenic
TCAACATGAGGTAGTGATAA+TGG 0.304569 4_1:-81823245 None:intergenic
TCACAGTTCATTGTAGCATT+AGG 0.306200 4_1:-81823389 None:intergenic
TTATGGTGAGAGGGAGGCTT+AGG 0.307436 4_1:-81819161 None:intergenic
AGCGCTAGCTTCGGTTGAAT+TGG 0.310305 4_1:-81824743 None:intergenic
GATTTAGGGTTTGAATTTCT+TGG 0.322901 4_1:-81819101 None:intergenic
AGGGAATGCAATGCCGTAAT+AGG 0.325356 4_1:+81824268 Msa0577450:CDS
TCAGCGCCTTCAGAGCCTTA+TGG 0.329198 4_1:+81824312 Msa0577450:CDS
TTTCTGCTGCTGCTGATTGT+TGG 0.333266 4_1:-81823482 None:intergenic
CATTGCATCCTTCAGTTCCT+TGG 0.335354 4_1:-81824953 None:intergenic
AAAGTTGGCTTGGAATCTTC+AGG 0.337311 4_1:-81823758 None:intergenic
AACAGTAATCTTCTAGTTGA+TGG 0.338073 4_1:+81826735 Msa0577450:three_prime_UTR
AGATGAAAATAGAGGGCTTC+AGG 0.347925 4_1:+81825206 Msa0577450:CDS
ATCAATCTCGTTGATTTAGC+TGG 0.354509 4_1:+81822052 Msa0577450:CDS
AGAGAAAGTAGAGTTTGAAA+TGG 0.354988 4_1:-81818994 None:intergenic
TTGAATTGGGATTGGCAGTT+AGG 0.359323 4_1:-81824729 None:intergenic
CACTGGGAGGTGGGGATTTG+AGG 0.361677 4_1:-81823454 None:intergenic
AATCTAGGTTCAGATGAATT+AGG 0.361975 4_1:-81824697 None:intergenic
CGCGTATTACTTCACGCAAT+TGG 0.362202 4_1:-81823019 None:intergenic
CACACTACCTCCTCCGATTC+CGG 0.363080 4_1:+81819212 Msa0577450:CDS
GGGAGGTGGGGATTTGAGGG+TGG 0.364669 4_1:-81823450 None:intergenic
GTTAGGTTTGCTACCAATCT+AGG 0.374279 4_1:-81824712 None:intergenic
GTTGATTGACAAAGAATTGC+TGG 0.378423 4_1:-81819400 None:intergenic
ATTAGAGAAGATGTTAAATC+TGG 0.380869 4_1:+81820245 Msa0577450:CDS
TATGGTGAGAGGGAGGCTTA+GGG 0.386979 4_1:-81819160 None:intergenic
TTCCCTTGTCTGACCTATTA+CGG 0.388662 4_1:-81824281 None:intergenic
TTCCTTGGAAAACTTCTTCT+CGG 0.388879 4_1:-81824938 None:intergenic
AACTTCAGCTCTGAGTTCTT+CGG 0.390790 4_1:-81824869 None:intergenic
GTGGGGTCCTCCCAATGCTT+TGG 0.393051 4_1:+81819759 Msa0577450:CDS
TGGGGAGAGGGAAGTGCTAA+TGG 0.393737 4_1:+81824585 Msa0577450:CDS
GAAGATCATGCCAGAATTCT+CGG 0.400093 4_1:+81823311 Msa0577450:CDS
TTCTTTGTCAATCAACGGTC+AGG 0.400841 4_1:+81819407 Msa0577450:CDS
GCGCTAGCTTCGGTTGAATT+GGG 0.402856 4_1:-81824742 None:intergenic
ATGGTGAGAGGGAGGCTTAG+GGG 0.406085 4_1:-81819159 None:intergenic
ATAGGCTGCAGAGAAAGTTT+TGG 0.408871 4_1:+81824062 Msa0577450:intron
CTAGTAGAGAATTGTTTGGC+TGG 0.411568 4_1:+81819592 Msa0577450:CDS
TGCCAAAGTAAAACTTGAAC+AGG 0.418587 4_1:+81824801 Msa0577450:CDS
CAACATGAGGTAGTGATAAT+GGG 0.424681 4_1:-81823244 None:intergenic
AGCTCTGAGTTCTTCGGAAA+GGG 0.425657 4_1:-81824863 None:intergenic
GCGGGCAATGGATGCAGAAC+AGG 0.426748 4_1:+81826423 Msa0577450:CDS
CTTGCTGAAGTTTCTCAGAC+AGG 0.427276 4_1:+81822699 Msa0577450:CDS
TGCCAAATCACGTTTGCCTA+TGG 0.428748 4_1:+81826525 Msa0577450:CDS
TTAGAACAGTCATGGTTCTC+TGG 0.430513 4_1:+81826670 Msa0577450:CDS
GGAGGTGGGGATTTGAGGGT+GGG 0.432496 4_1:-81823449 None:intergenic
GCAATAAACACAAACTTCTT+CGG 0.433375 4_1:-81823205 None:intergenic
TTCTTGCAGATGCCGGTGAA+TGG 0.433875 4_1:-81824651 None:intergenic
GCTTGCGTTTGAGAGGGTTA+TGG 0.440022 4_1:-81819178 None:intergenic
GTCCACTGGAAAAGTTGGCT+TGG 0.444668 4_1:-81823768 None:intergenic
TTGATACTTGAGTTGCTTGT+CGG 0.446475 4_1:-81819974 None:intergenic
TAATTCATCTGAACCTAGAT+TGG 0.447062 4_1:+81824699 Msa0577450:CDS
CCATCGTCTTTATTATAAGA+TGG 0.447431 4_1:-81826634 None:intergenic
CTTCATTGTGAAAGTGACTT+AGG 0.452287 4_1:+81823548 Msa0577450:CDS
GGTTGTATTGCTTCTTCCAT+AGG 0.452411 4_1:-81826541 None:intergenic
AACCACCTTGACGCCGGAAT+CGG 0.453208 4_1:-81819225 None:intergenic
GAATTAGGCAACTGCAACAA+TGG 0.453404 4_1:-81824682 None:intergenic
CTAAGTCACTTTCACAATGA+AGG 0.455974 4_1:-81823547 None:intergenic
GCAGACTCAGGGCAATCAAC+AGG 0.457682 4_1:-81823932 None:intergenic
ATTTGCTTCAGCGCTAGCTT+CGG 0.458647 4_1:-81824752 None:intergenic
GCAATGCAAATAGCTATAGA+AGG 0.465218 4_1:+81824970 Msa0577450:CDS
TTTGGTTTATCAGCAGACTC+AGG 0.468071 4_1:-81823944 None:intergenic
CAATGAAGGTTATTCTGAGA+TGG 0.471970 4_1:-81823533 None:intergenic
TTCACCGGCATCTGCAAGAA+AGG 0.472114 4_1:+81824654 Msa0577450:CDS
ATCCTAGTAGATGAAAATAG+AGG 0.476005 4_1:+81825198 Msa0577450:CDS
GGATTGTTAAACAGAACAAT+AGG 0.477436 4_1:+81821365 Msa0577450:CDS
GACGGGAATCTGAACGGAAA+TGG 0.478685 4_1:-81819034 None:intergenic
AACATGTTCAGTTGCTTGAA+AGG 0.480147 4_1:+81825034 Msa0577450:CDS
GATAATGGGTAGTGGAGTCT+AGG 0.484225 4_1:-81823230 None:intergenic
ACTTTGTCCACTGGAAAAGT+TGG 0.486624 4_1:-81823773 None:intergenic
GTTGGTGAAACACTGGGAGG+TGG 0.490392 4_1:-81823464 None:intergenic
GCCTCTAGTAGAGAATTGTT+TGG 0.492372 4_1:+81819588 Msa0577450:CDS
GGGTCCTCCCAATGCTTTGG+AGG 0.496395 4_1:+81819762 Msa0577450:CDS
AGGATCCATAAGGAGAGAAA+TGG 0.497084 4_1:+81824086 Msa0577450:CDS
GCCCAAAAGCTGCGCTGCAA+TGG 0.497965 4_1:-81823709 None:intergenic
ATGCTGAAATTTCTGCTGCA+AGG 0.501123 4_1:-81825146 None:intergenic
CTACCTCATGTTGATGAAGA+TGG 0.501402 4_1:+81823254 Msa0577450:CDS
CAAAAGCTGCGCTGCAATGG+TGG 0.501811 4_1:-81823706 None:intergenic
TGGTGAGAGGGAGGCTTAGG+GGG 0.502186 4_1:-81819158 None:intergenic
TTATATCATCAATTCCATCA+TGG 0.503479 4_1:-81825068 None:intergenic
TGGAACAATACAAGCATGAG+AGG 0.504410 4_1:+81824248 Msa0577450:CDS
TATTCCTTTCTTGCAGATGC+CGG 0.504797 4_1:-81824658 None:intergenic
CGCTCACATTGATGCTACTC+AGG 0.504941 4_1:+81819449 Msa0577450:CDS
AGAGGGTTATGGTGAGAGGG+AGG 0.507922 4_1:-81819167 None:intergenic
GAGGTAGTGATAATGGGTAG+TGG 0.508035 4_1:-81823238 None:intergenic
TGATCAACAGTCTTTGTGAC+CGG 0.508243 4_1:-81823578 None:intergenic
TCCAGTGGACAAAGTTAATG+TGG 0.509331 4_1:+81823781 Msa0577450:CDS
TGCTGAAATTTCTGCTGCAA+GGG 0.509462 4_1:-81825145 None:intergenic
ATGTCACTGTTCATTTCTTG+AGG 0.510264 4_1:+81819996 Msa0577450:CDS
AGAACAGTATGCAGATTTGG+AGG 0.511708 4_1:+81825008 Msa0577450:CDS
AGAAGGTGTCATCACTGCTC+AGG 0.511869 4_1:+81825299 Msa0577450:CDS
TGGGTAAAACACCATCCATA+AGG 0.512730 4_1:-81824327 None:intergenic
TAGTAGAGAATTGTTTGGCT+GGG 0.512758 4_1:+81819593 Msa0577450:CDS
GTCAACTTGGAGTCCCTGTA+TGG 0.513146 4_1:-81822738 None:intergenic
TTTGAGAGGGTTATGGTGAG+AGG 0.513271 4_1:-81819171 None:intergenic
TTCGGATCAAAGCTGCTGAA+TGG 0.513866 4_1:-81823187 None:intergenic
TCAATCTCGTTGATTTAGCT+GGG 0.515149 4_1:+81822053 Msa0577450:CDS
AGCTTCGGTTGAATTGGGAT+TGG 0.516854 4_1:-81824737 None:intergenic
TCTGAAGCAGTGCAAGCTGC+AGG 0.518800 4_1:+81825246 Msa0577450:CDS
CCCACATTAACTTTGTCCAC+TGG 0.522770 4_1:-81823782 None:intergenic
TTACCTCATGTTCATGAGCA+AGG 0.523622 4_1:-81824381 None:intergenic
GAGGTGGGGATTTGAGGGTG+GGG 0.523855 4_1:-81823448 None:intergenic
CACCATCCATAAGGCTCTGA+AGG 0.524408 4_1:-81824318 None:intergenic
AGATGGGGACAGCTTTGATA+AGG 0.524443 4_1:-81823516 None:intergenic
TTTCTATGAATTTGGGGAGA+GGG 0.525521 4_1:+81824573 Msa0577450:CDS
CATAAGGAGAGAAATGGCTC+TGG 0.525907 4_1:+81824092 Msa0577450:CDS
AATGAAGGTTATTCTGAGAT+GGG 0.526146 4_1:-81823532 None:intergenic
AGCAGCGGCATATACCATAC+AGG 0.526334 4_1:+81822724 Msa0577450:CDS
ACAAGTCGTTAGCTGAAAAG+AGG 0.527121 4_1:+81824899 Msa0577450:CDS
ATTAACATTGTGTGCAACCT+TGG 0.528770 4_1:-81826602 None:intergenic
ACTGGGAGGTGGGGATTTGA+GGG 0.531258 4_1:-81823453 None:intergenic
TTGAGAGGGTTATGGTGAGA+GGG 0.531566 4_1:-81819170 None:intergenic
TGAAGTAATACGCGAACTCA+AGG 0.533434 4_1:+81823028 Msa0577450:CDS
TTACATATATACCTTTCCGC+AGG 0.534261 4_1:-81822822 None:intergenic
CTCCTCCGATTCCGGCGTCA+AGG 0.534301 4_1:+81819220 Msa0577450:CDS
GCTGATTGTTGGTGAAACAC+TGG 0.534924 4_1:-81823471 None:intergenic
TACCTCATGTTCATGAGCAA+GGG 0.536189 4_1:-81824380 None:intergenic
AGCAATTCTTTGTCAATCAA+CGG 0.537005 4_1:+81819402 Msa0577450:CDS
GCGCTATTTCCCCTGCGGAA+AGG 0.538665 4_1:+81822811 Msa0577450:CDS
TGAAGATGGCGATGAGGAGA+TGG 0.540221 4_1:+81823268 Msa0577450:CDS
GCTGCTGAATGGCCTCCACT+TGG 0.541359 4_1:-81823176 None:intergenic
CAGCTCTGAGTTCTTCGGAA+AGG 0.542049 4_1:-81824864 None:intergenic
TTTGAATTTCTTGGTACAGT+CGG 0.543649 4_1:-81819092 None:intergenic
CGTCTTAAAGAAGCAGAAGA+AGG 0.544173 4_1:+81825282 Msa0577450:CDS
CTGCATCGAGTTAAAACAAA+GGG 0.545455 4_1:+81823146 Msa0577450:CDS
TGCAGAACAGGAAGCTGCAA+AGG 0.549517 4_1:+81826435 Msa0577450:CDS
TTGGTTTATCAGCAGACTCA+GGG 0.551556 4_1:-81823943 None:intergenic
GGGAATCTGAACGGAAATGG+TGG 0.552376 4_1:-81819031 None:intergenic
TTGGTGAAACACTGGGAGGT+GGG 0.552725 4_1:-81823463 None:intergenic
TTGAACAGGAAAGAAGTGAA+TGG 0.554802 4_1:+81824815 Msa0577450:CDS
CTGATTGTTGGTGAAACACT+GGG 0.557026 4_1:-81823470 None:intergenic
TTGCTAAATTAGAACAGTCA+TGG 0.559937 4_1:+81826662 Msa0577450:CDS
AGGCATAGAAAGATCCATGA+TGG 0.561214 4_1:+81825054 Msa0577450:CDS
TCGCTCATGAATTTCTCAGT+GGG 0.562537 4_1:-81824346 None:intergenic
AGAACTTAACAGCTAGCATC+CGG 0.562969 4_1:+81823660 Msa0577450:CDS
AATTCGAGCAGAGATTGTGC+TGG 0.563990 4_1:+81823335 Msa0577450:CDS
TCATCGAGCTTGCGTTTGAG+AGG 0.565712 4_1:-81819185 None:intergenic
CCAGTGGACAAAGTTAATGT+GGG 0.567343 4_1:+81823782 Msa0577450:CDS
CACCTTGACGCCGGAATCGG+AGG 0.570107 4_1:-81819222 None:intergenic
ACTTTCGTCGATGATAATGC+TGG 0.574805 4_1:+81823812 Msa0577450:CDS
ATTTCTATGAATTTGGGGAG+AGG 0.577865 4_1:+81824572 Msa0577450:CDS
TGATCTGCAGAAGCGGGCAA+TGG 0.578529 4_1:+81826411 Msa0577450:intron
CATCGAGCTTGCGTTTGAGA+GGG 0.579039 4_1:-81819184 None:intergenic
AATGGACTGAGGCAGAAAGC+AGG 0.579246 4_1:+81824833 Msa0577450:CDS
TACATATATACCTTTCCGCA+GGG 0.582627 4_1:-81822821 None:intergenic
CAATAGTTTCAAGACCATGC+CGG 0.583413 4_1:-81823679 None:intergenic
TCCTAGTAGATGAAAATAGA+GGG 0.584197 4_1:+81825199 Msa0577450:CDS
CTTGACGCCGGAATCGGAGG+AGG 0.588019 4_1:-81819219 None:intergenic
GTGGGAAGACCTACACTATG+TGG 0.588788 4_1:+81819740 Msa0577450:CDS
TCAGAATTTCTATGAATTTG+GGG 0.590270 4_1:+81824567 Msa0577450:CDS
TGGTGAAACACTGGGAGGTG+GGG 0.590675 4_1:-81823462 None:intergenic
CGCCTTCAGAGCCTTATGGA+TGG 0.590936 4_1:+81824316 Msa0577450:CDS
GCCAAACAATTCTCTACTAG+AGG 0.595772 4_1:-81819589 None:intergenic
AATGTGAGCGATGGAATCAA+AGG 0.596797 4_1:-81819436 None:intergenic
AGTAGCATCAATGTGAGCGA+TGG 0.601308 4_1:-81819445 None:intergenic
TTCGCTCATGAATTTCTCAG+TGG 0.604397 4_1:-81824347 None:intergenic
GAGATGGAGATTGTCGAGGA+TGG 0.604971 4_1:+81823284 Msa0577450:CDS
ATGACAAGATCATTACAAGT+AGG 0.607543 4_1:-81826562 None:intergenic
TGGGAAGACCTACACTATGT+GGG 0.607786 4_1:+81819741 Msa0577450:CDS
TGTGATAACCCTGCTAGCCT+CGG 0.614800 4_1:+81823407 Msa0577450:CDS
TAGCTATAGAAGGCCATGCA+CGG 0.615029 4_1:+81824980 Msa0577450:CDS
TCGACCTCCAAAGCATTGGG+AGG 0.622884 4_1:-81819766 None:intergenic
AAGTGACTTAGGCATGATGC+CGG 0.623795 4_1:+81823559 Msa0577450:CDS
GTCCCTTGCTCATGAACATG+AGG 0.624424 4_1:+81824378 Msa0577450:CDS
GGACTGAGGCAGAAAGCAGG+TGG 0.625733 4_1:+81824836 Msa0577450:CDS
TAGGCAAACGTGATTTGGCA+AGG 0.627042 4_1:-81826522 None:intergenic
AGGGCTTCAGGATCAACTGA+AGG 0.627465 4_1:+81825218 Msa0577450:CDS
ATGCCGTAATAGGTCAGACA+AGG 0.630438 4_1:+81824278 Msa0577450:CDS
ACTGTTCTAAAATCCGTGCA+TGG 0.638005 4_1:-81824993 None:intergenic
TGTTGTTGAATCTCGATGCA+AGG 0.644585 4_1:+81821439 Msa0577450:CDS
GTAATAGGTCAGACAAGGGA+AGG 0.647460 4_1:+81824283 Msa0577450:CDS
GGGAGGACCCCACATAGTGT+AGG 0.651236 4_1:-81819749 None:intergenic
ACAAAGGGTTACAATCCAAG+TGG 0.653422 4_1:+81823161 Msa0577450:CDS
ATGAAGGTTATTCTGAGATG+GGG 0.655165 4_1:-81823531 None:intergenic
ACCTTGGTGTCATAATCAGT+AGG 0.655217 4_1:-81826586 None:intergenic
TTAACAGCTAGCATCCGGCA+TGG 0.656368 4_1:+81823665 Msa0577450:CDS
GGAACAATACAAGCATGAGA+GGG 0.657184 4_1:+81824249 Msa0577450:CDS
GGAGCTTTCAGAATTTACAC+TGG 0.657975 4_1:-81821393 None:intergenic
TTTCAATACAGACTGGAAGT+GGG 0.659284 4_1:+81819722 Msa0577450:intron
AAGGGTTACAATCCAAGTGG+AGG 0.659639 4_1:+81823164 Msa0577450:CDS
TGAGGAGATGGAGATTGTCG+AGG 0.660724 4_1:+81823280 Msa0577450:CDS
CCATCTTATAATAAAGACGA+TGG 0.663271 4_1:+81826634 Msa0577450:CDS
GCAGCGGCATATACCATACA+GGG 0.666202 4_1:+81822725 Msa0577450:CDS
AATTCATCAATTGATCAACA+AGG 0.669780 4_1:+81819790 Msa0577450:CDS
GGGAAGACCTACACTATGTG+GGG 0.672779 4_1:+81819742 Msa0577450:CDS
ACATATATACCTTTCCGCAG+GGG 0.675756 4_1:-81822820 None:intergenic
GCTTTGCGCTATTTCCCCTG+CGG 0.679797 4_1:+81822806 Msa0577450:CDS
TCGCCATCTTCATCAACATG+AGG 0.680114 4_1:-81823257 None:intergenic
GCCTACTGATTATGACACCA+AGG 0.680308 4_1:+81826585 Msa0577450:CDS
TTTCTCAGACAGGAAAGCAG+CGG 0.681765 4_1:+81822709 Msa0577450:CDS
TTATTGCAGGAGTCTCTGGG+TGG 0.696573 4_1:+81822765 Msa0577450:CDS
GCTGCATCGAGTTAAAACAA+AGG 0.702684 4_1:+81823145 Msa0577450:CDS
TCATCAATTGATCAACAAGG+AGG 0.703598 4_1:+81819793 Msa0577450:CDS
TGCCGTAATAGGTCAGACAA+GGG 0.703757 4_1:+81824279 Msa0577450:CDS
TGTTGATGAAGATGGCGATG+AGG 0.706823 4_1:+81823262 Msa0577450:CDS
CAAAGCTATCAAGAACAAAG+CGG 0.712191 4_1:+81822965 Msa0577450:CDS
GGAAAGAAGTGAATGGACTG+AGG 0.717967 4_1:+81824822 Msa0577450:CDS
CTACGTCGAGAATCTTACAG+AGG 0.721953 4_1:+81820271 Msa0577450:CDS
ATTGTTGGTGAAACACTGGG+AGG 0.805930 4_1:-81823467 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTATATATATTTTTT+AGG + chr4_1:81819311-81819330 Msa0577450:intron 0.0%
!!! TTTTATTTCATCAATCATAT+TGG + chr4_1:81820842-81820861 Msa0577450:intron 15.0%
!! ATTCAGTTAAAAAATTGATT+TGG + chr4_1:81821065-81821084 Msa0577450:intron 15.0%
!! ACAAAAATATATCAATTAAC+TGG - chr4_1:81821212-81821231 None:intergenic 15.0%
!!! GAAAATATTTTCTAAAAAAC+TGG - chr4_1:81821283-81821302 None:intergenic 15.0%
!! ACAATAGTTAAATTGTATTA+TGG + chr4_1:81821511-81821530 Msa0577450:intron 15.0%
!! CAATAGTTAAATTGTATTAT+GGG + chr4_1:81821512-81821531 Msa0577450:intron 15.0%
!! AAGGATAAAGTAATAAATAA+AGG + chr4_1:81821730-81821749 Msa0577450:intron 15.0%
!! AGGATAAAGTAATAAATAAA+GGG + chr4_1:81821731-81821750 Msa0577450:intron 15.0%
!! TTTATTAGTTGAAATTTAAG+TGG + chr4_1:81825963-81825982 Msa0577450:intron 15.0%
!! TTATTAGTTGAAATTTAAGT+GGG + chr4_1:81825964-81825983 Msa0577450:intron 15.0%
!! TAAAAATTAGCTATTAGAAT+AGG - chr4_1:81826351-81826370 None:intergenic 15.0%
!!! ATATTTTTTAGGTTATTGTG+AGG + chr4_1:81819322-81819341 Msa0577450:intron 20.0%
!! TAACAAAAACAAAATGATGA+AGG - chr4_1:81819666-81819685 None:intergenic 20.0%
!!! GTGATCTATATATAGTTTTT+AGG + chr4_1:81820802-81820821 Msa0577450:intron 20.0%
!!! ATCTATATATAGTTTTTAGG+TGG + chr4_1:81820805-81820824 Msa0577450:intron 20.0%
!! AAATGTTCCTAAAACTATAA+AGG - chr4_1:81820900-81820919 None:intergenic 20.0%
!!! TATAGTTTTAGGAACATTTA+AGG + chr4_1:81820901-81820920 Msa0577450:intron 20.0%
!!! GAATTTGTCATCTTTAAAAT+TGG + chr4_1:81820935-81820954 Msa0577450:intron 20.0%
!!! TTTCTAAAAAACTGGTTAAT+CGG - chr4_1:81821275-81821294 None:intergenic 20.0%
!! AATATCCTTCATTAATGATA+TGG + chr4_1:81821682-81821701 Msa0577450:intron 20.0%
!! TAGTGTATGAATATTTGAAA+TGG - chr4_1:81822220-81822239 None:intergenic 20.0%
!! AAGGTATATATGTAAAAAAC+TGG + chr4_1:81822830-81822849 Msa0577450:intron 20.0%
!! CACAATAGATGATTATAAAA+TGG - chr4_1:81824204-81824223 None:intergenic 20.0%
!!! GTAAAAGTAACTTCTTTTTA+AGG + chr4_1:81824400-81824419 Msa0577450:intron 20.0%
!! TATCAGAATTTCTATGAATT+TGG + chr4_1:81824565-81824584 Msa0577450:CDS 20.0%
!! ATCAGAATTTCTATGAATTT+GGG + chr4_1:81824566-81824585 Msa0577450:CDS 20.0%
!! TCTAAGTTCTGTTTATTATT+AGG - chr4_1:81825582-81825601 None:intergenic 20.0%
!! AATAATAAACAGAACTTAGA+TGG + chr4_1:81825582-81825601 Msa0577450:intron 20.0%
!! TCTAAGTTCTGTTTATTATT+AGG - chr4_1:81825582-81825601 None:intergenic 20.0%
!!! TTTTAGTTCAATTCCTTATT+TGG - chr4_1:81826017-81826036 None:intergenic 20.0%
!!! ACTAAAATAGTGTGTATTTT+AGG + chr4_1:81826030-81826049 Msa0577450:intron 20.0%
!! GGAAATAGAATAAACTTATT+AGG + chr4_1:81826231-81826250 Msa0577450:intron 20.0%
!! TACATATTACATATTGTAAG+AGG - chr4_1:81826328-81826347 None:intergenic 20.0%
!!! CAATTTATCAATTTGTTTGT+AGG - chr4_1:81826461-81826480 None:intergenic 20.0%
! GTTAAAAATTTCGGTAATTG+TGG - chr4_1:81819280-81819299 None:intergenic 25.0%
!!! CTTGATATTTTTGAGCTTAT+TGG + chr4_1:81819562-81819581 Msa0577450:CDS 25.0%
!!! AATAGTTCTGTTTTTGCTTA+TGG + chr4_1:81819619-81819638 Msa0577450:CDS 25.0%
!!! ATAGTTCTGTTTTTGCTTAT+GGG + chr4_1:81819620-81819639 Msa0577450:CDS 25.0%
!!! TTTGTTTTTTCAATACAGAC+TGG + chr4_1:81819715-81819734 Msa0577450:intron 25.0%
! AATTCATCAATTGATCAACA+AGG + chr4_1:81819790-81819809 Msa0577450:CDS 25.0%
! GATTAATTGATATAACAGCA+AGG - chr4_1:81819920-81819939 None:intergenic 25.0%
! TATTCTACTTGTGTTTATAC+TGG + chr4_1:81820196-81820215 Msa0577450:intron 25.0%
! ATTAGAGAAGATGTTAAATC+TGG + chr4_1:81820245-81820264 Msa0577450:CDS 25.0%
! CTCTTCAAGAAATTTAACAA+GGG - chr4_1:81820536-81820555 None:intergenic 25.0%
! ACTCTTCAAGAAATTTAACA+AGG - chr4_1:81820537-81820556 None:intergenic 25.0%
!! TTAGCGTTGTTTCAATAATA+AGG + chr4_1:81820591-81820610 Msa0577450:intron 25.0%
! TAGATAATTGTATACGCATA+AGG + chr4_1:81820669-81820688 Msa0577450:intron 25.0%
!!! TTTTAACTGAATCTGCTTAA+TGG - chr4_1:81821057-81821076 None:intergenic 25.0%
!! TTCTAAAAAACTGGTTAATC+GGG - chr4_1:81821274-81821293 None:intergenic 25.0%
! ATAAATATTTGACAATCTCC+AGG - chr4_1:81821486-81821505 None:intergenic 25.0%
! AGTTAAATTGTATTATGGGT+CGG + chr4_1:81821516-81821535 Msa0577450:intron 25.0%
! TAGAATGACATAATTTGGAA+GGG - chr4_1:81821591-81821610 None:intergenic 25.0%
! ATTGCTAGAATGACATAATT+TGG - chr4_1:81821596-81821615 None:intergenic 25.0%
! ATATGGAGAACAGAAATTAA+AGG + chr4_1:81821699-81821718 Msa0577450:intron 25.0%
! AGAACAGAAATTAAAGGAAT+TGG + chr4_1:81821705-81821724 Msa0577450:intron 25.0%
! GAAATTAAAGGAATTGGAAA+AGG + chr4_1:81821711-81821730 Msa0577450:intron 25.0%
!! TAATAAATAAAGGGCATAGT+AGG + chr4_1:81821740-81821759 Msa0577450:intron 25.0%
! TGTTAGAATGACACATAATT+TGG + chr4_1:81821825-81821844 Msa0577450:intron 25.0%
! TATTCCATCGTTATTGTTAT+AGG + chr4_1:81822180-81822199 Msa0577450:intron 25.0%
!! TTTTCCTATAACAATAACGA+TGG - chr4_1:81822187-81822206 None:intergenic 25.0%
!! AATATTTGAAATGGCAACAA+AGG - chr4_1:81822211-81822230 None:intergenic 25.0%
! TATACCAATACTTCAATAGA+GGG - chr4_1:81822412-81822431 None:intergenic 25.0%
! TTTCAGCTACATATTTATTG+AGG - chr4_1:81822436-81822455 None:intergenic 25.0%
! GAACAAGTTACAAAACAAAA+AGG - chr4_1:81822579-81822598 None:intergenic 25.0%
! GTTCATCATATTTATACCTT+TGG + chr4_1:81822595-81822614 Msa0577450:intron 25.0%
! TTAGATCTGTAAAATCAAAC+AGG + chr4_1:81823118-81823137 Msa0577450:intron 25.0%
!!! TTAAGTTCTCAGTTTTAGTA+AGG - chr4_1:81823649-81823668 None:intergenic 25.0%
! TCAGAATTTCTATGAATTTG+GGG + chr4_1:81824567-81824586 Msa0577450:CDS 25.0%
!! TTTTTATATAGACCATTCAC+CGG + chr4_1:81824639-81824658 Msa0577450:CDS 25.0%
! TTATATCATCAATTCCATCA+TGG - chr4_1:81825071-81825090 None:intergenic 25.0%
!!! AGAATATTGATGATGATGAA+TGG - chr4_1:81825420-81825439 None:intergenic 25.0%
! TGACACTTAAATATTATCAG+TGG + chr4_1:81825826-81825845 Msa0577450:intron 25.0%
! ATATTGACAACAAAAACTGA+AGG + chr4_1:81826133-81826152 Msa0577450:intron 25.0%
AGAGAAAGTAGAGTTTGAAA+TGG - chr4_1:81818997-81819016 None:intergenic 30.0%
TTTGAATTTCTTGGTACAGT+CGG - chr4_1:81819095-81819114 None:intergenic 30.0%
! GATTTAGGGTTTGAATTTCT+TGG - chr4_1:81819104-81819123 None:intergenic 30.0%
! GCTGGAAATTTTCTTAACAA+TGG - chr4_1:81819385-81819404 None:intergenic 30.0%
AGCAATTCTTTGTCAATCAA+CGG + chr4_1:81819402-81819421 Msa0577450:CDS 30.0%
AATTGATACCCACTTCATTT+AGG - chr4_1:81819855-81819874 None:intergenic 30.0%
ATTCCTTGTTGAATCATTTG+AGG + chr4_1:81819884-81819903 Msa0577450:intron 30.0%
TTTATTCGGATCTAACAGAT+CGG - chr4_1:81820130-81820149 None:intergenic 30.0%
! ACCTGTAGGTTTCTTTTATT+CGG - chr4_1:81820144-81820163 None:intergenic 30.0%
! TGTAAATCAGCTTTTGATGA+AGG + chr4_1:81820316-81820335 Msa0577450:CDS 30.0%
CTGAATATTTATCTGGTGTA+TGG + chr4_1:81820439-81820458 Msa0577450:intron 30.0%
ATATTTATCTGGTGTATGGT+TGG + chr4_1:81820443-81820462 Msa0577450:intron 30.0%
AGCAACATGCTTTCATTATT+TGG - chr4_1:81820700-81820719 None:intergenic 30.0%
GATAGATGTGTAAACACATA+AGG + chr4_1:81820732-81820751 Msa0577450:intron 30.0%
! CGACAAACCTTTATAGTTTT+AGG + chr4_1:81820890-81820909 Msa0577450:intron 30.0%
TGAAATGCTCAATTGCTTAA+AGG + chr4_1:81821101-81821120 Msa0577450:intron 30.0%
GGATTGTTAAACAGAACAAT+AGG + chr4_1:81821365-81821384 Msa0577450:CDS 30.0%
AAGTAAAAACAGTGTGTGAA+CGG - chr4_1:81821418-81821437 None:intergenic 30.0%
GTTAAATTGTATTATGGGTC+GGG + chr4_1:81821517-81821536 Msa0577450:intron 30.0%
CTAGAATGACATAATTTGGA+AGG - chr4_1:81821592-81821611 None:intergenic 30.0%
GTTCTCCATATCATTAATGA+AGG - chr4_1:81821690-81821709 None:intergenic 30.0%
GAATGACACATAATTTGGAA+CGG + chr4_1:81821830-81821849 Msa0577450:intron 30.0%
TCAGAACGACAAAAATTAAC+AGG + chr4_1:81822076-81822095 Msa0577450:intron 30.0%
AATAGATCACTTTCACAACT+TGG + chr4_1:81822136-81822155 Msa0577450:intron 30.0%
ATAGATCACTTTCACAACTT+GGG + chr4_1:81822137-81822156 Msa0577450:intron 30.0%
TGCAAATGTTCAAGCTATAA+TGG - chr4_1:81822265-81822284 None:intergenic 30.0%
GTTTGATAGAAAGATACAGA+GGG - chr4_1:81822389-81822408 None:intergenic 30.0%
ATACCAATACTTCAATAGAG+GGG - chr4_1:81822411-81822430 None:intergenic 30.0%
CTATACCAATACTTCAATAG+AGG - chr4_1:81822413-81822432 None:intergenic 30.0%
ACTATGCTCAAACAATTACT+TGG + chr4_1:81822525-81822544 Msa0577450:intron 30.0%
ATTTAATCTCAGTAAGCACT+TGG - chr4_1:81822653-81822672 None:intergenic 30.0%
CTGCAATAAAAATGTCAACT+TGG - chr4_1:81822754-81822773 None:intergenic 30.0%
!! CAAGTTGACATTTTTATTGC+AGG + chr4_1:81822752-81822771 Msa0577450:CDS 30.0%
! TCTTTTCTCTCTATGTATTG+TGG + chr4_1:81822864-81822883 Msa0577450:intron 30.0%
TCAAAACAAATTTCATGCAC+TGG - chr4_1:81823093-81823112 None:intergenic 30.0%
GCAATAAACACAAACTTCTT+CGG - chr4_1:81823208-81823227 None:intergenic 30.0%
!! AATGAAGGTTATTCTGAGAT+GGG - chr4_1:81823535-81823554 None:intergenic 30.0%
! TAAGGAAATTTGAAGCTTTC+AGG - chr4_1:81823631-81823650 None:intergenic 30.0%
GTTTCTTTCTCGTATGATAT+AGG + chr4_1:81824044-81824063 Msa0577450:intron 30.0%
TGTTTCATAACAATAATCCG+TGG + chr4_1:81824178-81824197 Msa0577450:intron 30.0%
AGATGATTATAAAATGGCCA+CGG - chr4_1:81824198-81824217 None:intergenic 30.0%
CTCGTACAGTAATCATAAAA+GGG - chr4_1:81824429-81824448 None:intergenic 30.0%
TCTCGTACAGTAATCATAAA+AGG - chr4_1:81824430-81824449 None:intergenic 30.0%
! AAACATTCAACAGCTTTTGA+AGG + chr4_1:81824468-81824487 Msa0577450:intron 30.0%
AATCTAGGTTCAGATGAATT+AGG - chr4_1:81824700-81824719 None:intergenic 30.0%
TAATTCATCTGAACCTAGAT+TGG + chr4_1:81824699-81824718 Msa0577450:CDS 30.0%
!! TTCCTGTTCAAGTTTTACTT+TGG - chr4_1:81824806-81824825 None:intergenic 30.0%
! TTTAGAACAGTATGCAGATT+TGG + chr4_1:81825005-81825024 Msa0577450:CDS 30.0%
ATCCTAGTAGATGAAAATAG+AGG + chr4_1:81825198-81825217 Msa0577450:CDS 30.0%
TCCTAGTAGATGAAAATAGA+GGG + chr4_1:81825199-81825218 Msa0577450:CDS 30.0%
TGTGTTTCTTAGTCAATTTG+AGG + chr4_1:81825623-81825642 Msa0577450:intron 30.0%
TGTGTTTCTTAGTCAATTTG+AGG + chr4_1:81825623-81825642 Msa0577450:intron 30.0%
! AGTTCAATTCCTTATTTGGT+GGG - chr4_1:81826013-81826032 None:intergenic 30.0%
! TAGTTCAATTCCTTATTTGG+TGG - chr4_1:81826014-81826033 None:intergenic 30.0%
! GATTTGATAACAAGAACAGA+AGG + chr4_1:81826104-81826123 Msa0577450:intron 30.0%
ACAACAAAAACTGAAGGAAT+GGG + chr4_1:81826139-81826158 Msa0577450:intron 30.0%
GAAACTCATTCAAAGCAAAT+AGG + chr4_1:81826210-81826229 Msa0577450:intron 30.0%
ATGACAAGATCATTACAAGT+AGG - chr4_1:81826565-81826584 None:intergenic 30.0%
CCATCGTCTTTATTATAAGA+TGG - chr4_1:81826637-81826656 None:intergenic 30.0%
CCATCTTATAATAAAGACGA+TGG + chr4_1:81826634-81826653 Msa0577450:CDS 30.0%
TTGCTAAATTAGAACAGTCA+TGG + chr4_1:81826662-81826681 Msa0577450:CDS 30.0%
! AACAGTAATCTTCTAGTTGA+TGG + chr4_1:81826735-81826754 Msa0577450:three_prime_UTR 30.0%
!! TGTGCTTATGCGTTGATTTA+GGG - chr4_1:81819118-81819137 None:intergenic 35.0%
!! TTGTGCTTATGCGTTGATTT+AGG - chr4_1:81819119-81819138 None:intergenic 35.0%
AATTTCGGTAATTGTGGATG+AGG - chr4_1:81819274-81819293 None:intergenic 35.0%
GTTGATTGACAAAGAATTGC+TGG - chr4_1:81819403-81819422 None:intergenic 35.0%
TAGTAGAGAATTGTTTGGCT+GGG + chr4_1:81819593-81819612 Msa0577450:CDS 35.0%
! TTTTCAATACAGACTGGAAG+TGG + chr4_1:81819721-81819740 Msa0577450:intron 35.0%
TTTCAATACAGACTGGAAGT+GGG + chr4_1:81819722-81819741 Msa0577450:intron 35.0%
TCATCAATTGATCAACAAGG+AGG + chr4_1:81819793-81819812 Msa0577450:CDS 35.0%
AGACCTCAAATGATTCAACA+AGG - chr4_1:81819890-81819909 None:intergenic 35.0%
! TTGATACTTGAGTTGCTTGT+CGG - chr4_1:81819977-81819996 None:intergenic 35.0%
ATGTCACTGTTCATTTCTTG+AGG + chr4_1:81819996-81820015 Msa0577450:CDS 35.0%
TCCGAATAAAAGAAACCTAC+AGG + chr4_1:81820140-81820159 Msa0577450:intron 35.0%
! AATGGTTTGGATTAACCTGT+AGG - chr4_1:81820158-81820177 None:intergenic 35.0%
CACAAGTAGAATATGCACAA+GGG - chr4_1:81820189-81820208 None:intergenic 35.0%
ACACAAGTAGAATATGCACA+AGG - chr4_1:81820190-81820209 None:intergenic 35.0%
ACTTGTGTTTATACTGGAAC+TGG + chr4_1:81820202-81820221 Msa0577450:intron 35.0%
CTCAACGCTGAATATTTATC+TGG + chr4_1:81820432-81820451 Msa0577450:intron 35.0%
CTTGAAGAGTAATTATCCCT+AGG + chr4_1:81820547-81820566 Msa0577450:intron 35.0%
GCATTTCATACGAATTCCTA+GGG - chr4_1:81820566-81820585 None:intergenic 35.0%
AGCATTTCATACGAATTCCT+AGG - chr4_1:81820567-81820586 None:intergenic 35.0%
! ATAATGAAAGCATGTTGCTG+TGG + chr4_1:81820701-81820720 Msa0577450:intron 35.0%
ATAATGAATGCACATCACTG+TGG + chr4_1:81820764-81820783 Msa0577450:intron 35.0%
TAATGAATGCACATCACTGT+GGG + chr4_1:81820765-81820784 Msa0577450:intron 35.0%
!! TTTTAGGTGGTGCTTCTATT+AGG + chr4_1:81820818-81820837 Msa0577450:intron 35.0%
ACTATAAAGGTTTGTCGCAA+TGG - chr4_1:81820887-81820906 None:intergenic 35.0%
! ATTTTGCGTGAAATGCTTGT+TGG + chr4_1:81820996-81821015 Msa0577450:intron 35.0%
TAGTTACTAGCATGAAAGCA+AGG - chr4_1:81821167-81821186 None:intergenic 35.0%
TCGGGATTTAGAAGAGAAAT+GGG - chr4_1:81821256-81821275 None:intergenic 35.0%
ATCGGGATTTAGAAGAGAAA+TGG - chr4_1:81821257-81821276 None:intergenic 35.0%
TTATTTACCTTTCACTGTGC+AGG + chr4_1:81821343-81821362 Msa0577450:intron 35.0%
TATTTACCTTTCACTGTGCA+GGG + chr4_1:81821344-81821363 Msa0577450:intron 35.0%
AGTAAAAACAGTGTGTGAAC+GGG - chr4_1:81821417-81821436 None:intergenic 35.0%
CATGAGAAAAGCAAATGTTG+AGG - chr4_1:81821892-81821911 None:intergenic 35.0%
!! ATCAATCTCGTTGATTTAGC+TGG + chr4_1:81822052-81822071 Msa0577450:CDS 35.0%
!! TCAATCTCGTTGATTTAGCT+GGG + chr4_1:81822053-81822072 Msa0577450:CDS 35.0%
!! GCTATAATGGATATCAACAC+TGG - chr4_1:81822252-81822271 None:intergenic 35.0%
TGTACAACAAAGAAGTCGTA+TGG - chr4_1:81822313-81822332 None:intergenic 35.0%
GAAATAAATAGACCTGCACA+TGG - chr4_1:81822367-81822386 None:intergenic 35.0%
GGTTTGATAGAAAGATACAG+AGG - chr4_1:81822390-81822409 None:intergenic 35.0%
AAACCCCTCTATTGAAGTAT+TGG + chr4_1:81822405-81822424 Msa0577450:intron 35.0%
! AAATCAGCAGGCAAACATTT+TGG - chr4_1:81822486-81822505 None:intergenic 35.0%
TTGTAGAATTCAGTAGCCAA+AGG - chr4_1:81822614-81822633 None:intergenic 35.0%
! ATTTTTATTGCAGGAGTCTC+TGG + chr4_1:81822761-81822780 Msa0577450:CDS 35.0%
! TTTTTATTGCAGGAGTCTCT+GGG + chr4_1:81822762-81822781 Msa0577450:CDS 35.0%
TACATATATACCTTTCCGCA+GGG - chr4_1:81822824-81822843 None:intergenic 35.0%
TTACATATATACCTTTCCGC+AGG - chr4_1:81822825-81822844 None:intergenic 35.0%
CAAAGCTATCAAGAACAAAG+CGG + chr4_1:81822965-81822984 Msa0577450:CDS 35.0%
! AAAAGAGAAGGTTGATCATG+GGG - chr4_1:81823065-81823084 None:intergenic 35.0%
! GAAAAGAGAAGGTTGATCAT+GGG - chr4_1:81823066-81823085 None:intergenic 35.0%
CTGCATCGAGTTAAAACAAA+GGG + chr4_1:81823146-81823165 Msa0577450:CDS 35.0%
CAACATGAGGTAGTGATAAT+GGG - chr4_1:81823247-81823266 None:intergenic 35.0%
TCAACATGAGGTAGTGATAA+TGG - chr4_1:81823248-81823267 None:intergenic 35.0%
TCACAGTTCATTGTAGCATT+AGG - chr4_1:81823392-81823411 None:intergenic 35.0%
!! ATGAAGGTTATTCTGAGATG+GGG - chr4_1:81823534-81823553 None:intergenic 35.0%
! CAATGAAGGTTATTCTGAGA+TGG - chr4_1:81823536-81823555 None:intergenic 35.0%
! CTAAGTCACTTTCACAATGA+AGG - chr4_1:81823550-81823569 None:intergenic 35.0%
CTTCATTGTGAAAGTGACTT+AGG + chr4_1:81823548-81823567 Msa0577450:CDS 35.0%
! ACTTTGAGAACTTGCTTCTT+TGG - chr4_1:81823965-81823984 None:intergenic 35.0%
TTGTCAATCACGTTTGTAGT+TGG + chr4_1:81824228-81824247 Msa0577450:intron 35.0%
ATCTTCATCTTCAGAACTTC+TGG - chr4_1:81824511-81824530 None:intergenic 35.0%
ATTTCTATGAATTTGGGGAG+AGG + chr4_1:81824572-81824591 Msa0577450:CDS 35.0%
TTTCTATGAATTTGGGGAGA+GGG + chr4_1:81824573-81824592 Msa0577450:CDS 35.0%
TGCCAAAGTAAAACTTGAAC+AGG + chr4_1:81824801-81824820 Msa0577450:CDS 35.0%
TTGAACAGGAAAGAAGTGAA+TGG + chr4_1:81824815-81824834 Msa0577450:CDS 35.0%
TTCCTTGGAAAACTTCTTCT+CGG - chr4_1:81824941-81824960 None:intergenic 35.0%
GCAATGCAAATAGCTATAGA+AGG + chr4_1:81824970-81824989 Msa0577450:CDS 35.0%
AACATGTTCAGTTGCTTGAA+AGG + chr4_1:81825034-81825053 Msa0577450:CDS 35.0%
AAGCAGAAAAAGAAGCAGAA+AGG + chr4_1:81825172-81825191 Msa0577450:CDS 35.0%
GATGAATGGTGTAGTTAAGT+TGG - chr4_1:81825406-81825425 None:intergenic 35.0%
ATGAGACTAGAAGAAACAGA+TGG - chr4_1:81825488-81825507 None:intergenic 35.0%
AGTGAGAAAATGATAGTAGC+TGG + chr4_1:81825517-81825536 Msa0577450:intron 35.0%
CTTAGTCAATTTGAGGACAA+AGG + chr4_1:81825630-81825649 Msa0577450:intron 35.0%
GATAGTAGCTGTCATTCATA+AGG + chr4_1:81825688-81825707 Msa0577450:intron 35.0%
CTTAGTCAATTTGAGGACAA+AGG + chr4_1:81825630-81825649 Msa0577450:intron 35.0%
TCTTGGTATGTAAAGCTACT+TGG + chr4_1:81825873-81825892 Msa0577450:intron 35.0%
CTTGGTATGTAAAGCTACTT+GGG + chr4_1:81825874-81825893 Msa0577450:intron 35.0%
! TAAGTGGGTATTACCACTTT+TGG + chr4_1:81825979-81825998 Msa0577450:intron 35.0%
!! AAGTGGGTATTACCACTTTT+GGG + chr4_1:81825980-81825999 Msa0577450:intron 35.0%
GACAACAAAAACTGAAGGAA+TGG + chr4_1:81826138-81826157 Msa0577450:intron 35.0%
GTTATTCAGAGCAACTTTCT+AGG + chr4_1:81826261-81826280 Msa0577450:intron 35.0%
AAATGAAGCACACAATGGAT+TGG - chr4_1:81826301-81826320 None:intergenic 35.0%
GAAACAAATGAAGCACACAA+TGG - chr4_1:81826306-81826325 None:intergenic 35.0%
ATTAACATTGTGTGCAACCT+TGG - chr4_1:81826605-81826624 None:intergenic 35.0%
ATTGTGGATGAGGAAAAGAG+TGG - chr4_1:81819264-81819283 None:intergenic 40.0%
TTCTTTGTCAATCAACGGTC+AGG + chr4_1:81819407-81819426 Msa0577450:CDS 40.0%
AATGTGAGCGATGGAATCAA+AGG - chr4_1:81819439-81819458 None:intergenic 40.0%
GCCTCTAGTAGAGAATTGTT+TGG + chr4_1:81819588-81819607 Msa0577450:CDS 40.0%
GCCAAACAATTCTCTACTAG+AGG - chr4_1:81819592-81819611 None:intergenic 40.0%
CTAGTAGAGAATTGTTTGGC+TGG + chr4_1:81819592-81819611 Msa0577450:CDS 40.0%
!!! TTCTGTTTTTGCTTATGGGC+AGG + chr4_1:81819624-81819643 Msa0577450:CDS 40.0%
!! TTTTCGACCTCCAAAGCATT+GGG - chr4_1:81819772-81819791 None:intergenic 40.0%
! ATTTTCGACCTCCAAAGCAT+TGG - chr4_1:81819773-81819792 None:intergenic 40.0%
TTTGCACGCCTAAATGAAGT+GGG + chr4_1:81819844-81819863 Msa0577450:intron 40.0%
AAGGGAAGACTACAATGGTT+TGG - chr4_1:81820171-81820190 None:intergenic 40.0%
!! GGAGCATGTTTTTACTGTGA+AGG + chr4_1:81820292-81820311 Msa0577450:CDS 40.0%
! GTCTAAGACTAGTTCGACAA+TGG - chr4_1:81820366-81820385 None:intergenic 40.0%
GTTTACACATCTATCCCACA+GGG - chr4_1:81820727-81820746 None:intergenic 40.0%
TGTTTACACATCTATCCCAC+AGG - chr4_1:81820728-81820747 None:intergenic 40.0%
CGGGATTTAGAAGAGAAATG+GGG - chr4_1:81821255-81821274 None:intergenic 40.0%
GGAGCTTTCAGAATTTACAC+TGG - chr4_1:81821396-81821415 None:intergenic 40.0%
TGTTGTTGAATCTCGATGCA+AGG + chr4_1:81821439-81821458 Msa0577450:CDS 40.0%
TATACTGTTATCTCGTGTCC+TGG + chr4_1:81821465-81821484 Msa0577450:intron 40.0%
! GTTAAAGATCGCTGACTGTT+AGG - chr4_1:81821560-81821579 None:intergenic 40.0%
CTCTGCAAATTGAAGATACG+AGG - chr4_1:81821995-81822014 None:intergenic 40.0%
CAAAAATTAACAGGTGCAGC+AGG + chr4_1:81822085-81822104 Msa0577450:intron 40.0%
!! TTGCCTGCTGATTTAGTTGT+TGG + chr4_1:81822492-81822511 Msa0577450:intron 40.0%
ATGCCAACAACTAAATCAGC+AGG - chr4_1:81822498-81822517 None:intergenic 40.0%
!! TGCTGATTTAGTTGTTGGCA+TGG + chr4_1:81822497-81822516 Msa0577450:intron 40.0%
ATCTCAGTAAGCACTTGGAA+TGG - chr4_1:81822648-81822667 None:intergenic 40.0%
CTGAGATTAAATCTGACTGC+AGG + chr4_1:81822661-81822680 Msa0577450:intron 40.0%
ACATATATACCTTTCCGCAG+GGG - chr4_1:81822823-81822842 None:intergenic 40.0%
TGAAGTAATACGCGAACTCA+AGG + chr4_1:81823028-81823047 Msa0577450:CDS 40.0%
! AAAGAGAAGGTTGATCATGG+GGG - chr4_1:81823064-81823083 None:intergenic 40.0%
! GGAAAAGAGAAGGTTGATCA+TGG - chr4_1:81823067-81823086 None:intergenic 40.0%
! TGATCAACCTTCTCTTTTCC+TGG + chr4_1:81823067-81823086 Msa0577450:intron 40.0%
GCTGCATCGAGTTAAAACAA+AGG + chr4_1:81823145-81823164 Msa0577450:CDS 40.0%
ACAAAGGGTTACAATCCAAG+TGG + chr4_1:81823161-81823180 Msa0577450:CDS 40.0%
! CTACCTCATGTTGATGAAGA+TGG + chr4_1:81823254-81823273 Msa0577450:CDS 40.0%
GAAGATCATGCCAGAATTCT+CGG + chr4_1:81823311-81823330 Msa0577450:CDS 40.0%
! CTGATTGTTGGTGAAACACT+GGG - chr4_1:81823473-81823492 None:intergenic 40.0%
TGATCAACAGTCTTTGTGAC+CGG - chr4_1:81823581-81823600 None:intergenic 40.0%
AGAACTTAACAGCTAGCATC+CGG + chr4_1:81823660-81823679 Msa0577450:CDS 40.0%
CAATAGTTTCAAGACCATGC+CGG - chr4_1:81823682-81823701 None:intergenic 40.0%
!! AAAGTTGGCTTGGAATCTTC+AGG - chr4_1:81823761-81823780 None:intergenic 40.0%
ACTTTGTCCACTGGAAAAGT+TGG - chr4_1:81823776-81823795 None:intergenic 40.0%
TCCAGTGGACAAAGTTAATG+TGG + chr4_1:81823781-81823800 Msa0577450:CDS 40.0%
CCAGTGGACAAAGTTAATGT+GGG + chr4_1:81823782-81823801 Msa0577450:CDS 40.0%
! ACTTTCGTCGATGATAATGC+TGG + chr4_1:81823812-81823831 Msa0577450:CDS 40.0%
! AGCATCTCAGATGCATTTTC+CGG + chr4_1:81823992-81824011 Msa0577450:intron 40.0%
AGATCGAAATTCAGCTATGC+CGG - chr4_1:81824014-81824033 None:intergenic 40.0%
! ATAGGCTGCAGAGAAAGTTT+TGG + chr4_1:81824062-81824081 Msa0577450:intron 40.0%
!! AAGTTTTGGCAGGATCCATA+AGG + chr4_1:81824076-81824095 Msa0577450:CDS 40.0%
AGGATCCATAAGGAGAGAAA+TGG + chr4_1:81824086-81824105 Msa0577450:CDS 40.0%
TGGAACAATACAAGCATGAG+AGG + chr4_1:81824248-81824267 Msa0577450:CDS 40.0%
GGAACAATACAAGCATGAGA+GGG + chr4_1:81824249-81824268 Msa0577450:CDS 40.0%
TTCCCTTGTCTGACCTATTA+CGG - chr4_1:81824284-81824303 None:intergenic 40.0%
TGGGTAAAACACCATCCATA+AGG - chr4_1:81824330-81824349 None:intergenic 40.0%
TCGCTCATGAATTTCTCAGT+GGG - chr4_1:81824349-81824368 None:intergenic 40.0%
TTCGCTCATGAATTTCTCAG+TGG - chr4_1:81824350-81824369 None:intergenic 40.0%
TACCTCATGTTCATGAGCAA+GGG - chr4_1:81824383-81824402 None:intergenic 40.0%
TTACCTCATGTTCATGAGCA+AGG - chr4_1:81824384-81824403 None:intergenic 40.0%
TATTCCTTTCTTGCAGATGC+CGG - chr4_1:81824661-81824680 None:intergenic 40.0%
GAATTAGGCAACTGCAACAA+TGG - chr4_1:81824685-81824704 None:intergenic 40.0%
!! GTTAGGTTTGCTACCAATCT+AGG - chr4_1:81824715-81824734 None:intergenic 40.0%
! TTGAATTGGGATTGGCAGTT+AGG - chr4_1:81824732-81824751 None:intergenic 40.0%
!! AACTTCAGCTCTGAGTTCTT+CGG - chr4_1:81824872-81824891 None:intergenic 40.0%
ACAAGTCGTTAGCTGAAAAG+AGG + chr4_1:81824899-81824918 Msa0577450:CDS 40.0%
! GAAGTTTTCCAAGGAACTGA+AGG + chr4_1:81824945-81824964 Msa0577450:CDS 40.0%
!! ACTGTTCTAAAATCCGTGCA+TGG - chr4_1:81824996-81825015 None:intergenic 40.0%
AGAACAGTATGCAGATTTGG+AGG + chr4_1:81825008-81825027 Msa0577450:CDS 40.0%
AGGCATAGAAAGATCCATGA+TGG + chr4_1:81825054-81825073 Msa0577450:CDS 40.0%
TGCTGAAATTTCTGCTGCAA+GGG - chr4_1:81825148-81825167 None:intergenic 40.0%
ATGCTGAAATTTCTGCTGCA+AGG - chr4_1:81825149-81825168 None:intergenic 40.0%
! GCCCTCTATTTTCATCTACT+AGG - chr4_1:81825203-81825222 None:intergenic 40.0%
AGATGAAAATAGAGGGCTTC+AGG + chr4_1:81825206-81825225 Msa0577450:CDS 40.0%
CGTCTTAAAGAAGCAGAAGA+AGG + chr4_1:81825282-81825301 Msa0577450:CDS 40.0%
! TAAGTTGGACGAAAAGAGAG+AGG - chr4_1:81825391-81825410 None:intergenic 40.0%
TATGACAGTGTCAATGGAAC+AGG - chr4_1:81825448-81825467 None:intergenic 40.0%
CGAACATATGACAGTGTCAA+TGG - chr4_1:81825454-81825473 None:intergenic 40.0%
GATAGTAGCTGGCATTCATA+AGG + chr4_1:81825528-81825547 Msa0577450:intron 40.0%
GTTGGCCATCAGTATGAATT+TGG + chr4_1:81825550-81825569 Msa0577450:intron 40.0%
GTCCTCCAAATTCATACTGA+TGG - chr4_1:81825558-81825577 None:intergenic 40.0%
GTAGCTGTCATTCATAAGGT+TGG + chr4_1:81825692-81825711 Msa0577450:intron 40.0%
GTTGGCCATCAGTATGAATT+TGG + chr4_1:81825550-81825569 Msa0577450:intron 40.0%
GTCCTCCAAATTCATACTGA+TGG - chr4_1:81825558-81825577 None:intergenic 40.0%
TACTTGGGCCATATGTTGAA+TGG + chr4_1:81825889-81825908 Msa0577450:intron 40.0%
ACTTGGGCCATATGTTGAAT+GGG + chr4_1:81825890-81825909 Msa0577450:intron 40.0%
AAAAACTGAAGGAATGGGAG+TGG + chr4_1:81826144-81826163 Msa0577450:intron 40.0%
CAGCCTTAAAAGAGTGAACT+GGG - chr4_1:81826380-81826399 None:intergenic 40.0%
TCAGCCTTAAAAGAGTGAAC+TGG - chr4_1:81826381-81826400 None:intergenic 40.0%
TTTGATGTGATCTGCAGAAG+CGG + chr4_1:81826404-81826423 Msa0577450:intron 40.0%
TTCCATAGGCAAACGTGATT+TGG - chr4_1:81826530-81826549 None:intergenic 40.0%
GGTTGTATTGCTTCTTCCAT+AGG - chr4_1:81826544-81826563 None:intergenic 40.0%
!! ACCTTGGTGTCATAATCAGT+AGG - chr4_1:81826589-81826608 None:intergenic 40.0%
TTAGAACAGTCATGGTTCTC+TGG + chr4_1:81826670-81826689 Msa0577450:CDS 40.0%
AGAGAGAGAGAGAGAGAGAA+CGG - chr4_1:81818969-81818988 None:intergenic 45.0%
! TTTTGCGACGGGAATCTGAA+CGG - chr4_1:81819043-81819062 None:intergenic 45.0%
! TCGTTGCAAGCTTTTTGCGA+CGG - chr4_1:81819055-81819074 None:intergenic 45.0%
TTGAGAGGGTTATGGTGAGA+GGG - chr4_1:81819173-81819192 None:intergenic 45.0%
TTTGAGAGGGTTATGGTGAG+AGG - chr4_1:81819174-81819193 None:intergenic 45.0%
AAGAAAAACCACCTTGACGC+CGG - chr4_1:81819234-81819253 None:intergenic 45.0%
!! TCGTCTTTTTCACTGCTCAC+TGG - chr4_1:81819354-81819373 None:intergenic 45.0%
AGTAGCATCAATGTGAGCGA+TGG - chr4_1:81819448-81819467 None:intergenic 45.0%
TGGGAAGACCTACACTATGT+GGG + chr4_1:81819741-81819760 Msa0577450:CDS 45.0%
AGAGTCGCTCAAAAACACGA+GGG - chr4_1:81819825-81819844 None:intergenic 45.0%
AAGAGTCGCTCAAAAACACG+AGG - chr4_1:81819826-81819845 None:intergenic 45.0%
CTTTGCACGCCTAAATGAAG+TGG + chr4_1:81819843-81819862 Msa0577450:intron 45.0%
AATCGTTGTGTCTCATGCGT+AGG + chr4_1:81819936-81819955 Msa0577450:intron 45.0%
TGCACAAGGGAAGACTACAA+TGG - chr4_1:81820176-81820195 None:intergenic 45.0%
CTACGTCGAGAATCTTACAG+AGG + chr4_1:81820271-81820290 Msa0577450:CDS 45.0%
!! TTGTCGCAATGGTGATGGAA+AGG - chr4_1:81820876-81820895 None:intergenic 45.0%
AAGGTTTGTCGCAATGGTGA+TGG - chr4_1:81820881-81820900 None:intergenic 45.0%
AACAATCCCTGCACAGTGAA+AGG - chr4_1:81821353-81821372 None:intergenic 45.0%
CAGTAAGCACTTGGAATGGT+GGG - chr4_1:81822644-81822663 None:intergenic 45.0%
TCAGTAAGCACTTGGAATGG+TGG - chr4_1:81822645-81822664 None:intergenic 45.0%
CTTGCTGAAGTTTCTCAGAC+AGG + chr4_1:81822699-81822718 Msa0577450:CDS 45.0%
TTTCTCAGACAGGAAAGCAG+CGG + chr4_1:81822709-81822728 Msa0577450:CDS 45.0%
CGCGTATTACTTCACGCAAT+TGG - chr4_1:81823022-81823041 None:intergenic 45.0%
! ACAAATTTCATGCACTGGCC+AGG - chr4_1:81823088-81823107 None:intergenic 45.0%
AAGGGTTACAATCCAAGTGG+AGG + chr4_1:81823164-81823183 Msa0577450:CDS 45.0%
TTCGGATCAAAGCTGCTGAA+TGG - chr4_1:81823190-81823209 None:intergenic 45.0%
!! GATAATGGGTAGTGGAGTCT+AGG - chr4_1:81823233-81823252 None:intergenic 45.0%
!! GAGGTAGTGATAATGGGTAG+TGG - chr4_1:81823241-81823260 None:intergenic 45.0%
TCGCCATCTTCATCAACATG+AGG - chr4_1:81823260-81823279 None:intergenic 45.0%
! TGTTGATGAAGATGGCGATG+AGG + chr4_1:81823262-81823281 Msa0577450:CDS 45.0%
AATTCGAGCAGAGATTGTGC+TGG + chr4_1:81823335-81823354 Msa0577450:CDS 45.0%
! ATTGTTGGTGAAACACTGGG+AGG - chr4_1:81823470-81823489 None:intergenic 45.0%
! GCTGATTGTTGGTGAAACAC+TGG - chr4_1:81823474-81823493 None:intergenic 45.0%
! TTTCTGCTGCTGCTGATTGT+TGG - chr4_1:81823485-81823504 None:intergenic 45.0%
! AGATGGGGACAGCTTTGATA+AGG - chr4_1:81823519-81823538 None:intergenic 45.0%
AAGTGACTTAGGCATGATGC+CGG + chr4_1:81823559-81823578 Msa0577450:CDS 45.0%
! TTCCAAGCCAACTTTTCCAG+TGG + chr4_1:81823766-81823785 Msa0577450:CDS 45.0%
CCCACATTAACTTTGTCCAC+TGG - chr4_1:81823785-81823804 None:intergenic 45.0%
CAGAGCCATTTCTCTCCTTA+TGG - chr4_1:81824094-81824113 None:intergenic 45.0%
CATAAGGAGAGAAATGGCTC+TGG + chr4_1:81824092-81824111 Msa0577450:CDS 45.0%
AGGGAATGCAATGCCGTAAT+AGG + chr4_1:81824268-81824287 Msa0577450:CDS 45.0%
ATGCCGTAATAGGTCAGACA+AGG + chr4_1:81824278-81824297 Msa0577450:CDS 45.0%
TGCCGTAATAGGTCAGACAA+GGG + chr4_1:81824279-81824298 Msa0577450:CDS 45.0%
GTAATAGGTCAGACAAGGGA+AGG + chr4_1:81824283-81824302 Msa0577450:CDS 45.0%
AGCTTCGGTTGAATTGGGAT+TGG - chr4_1:81824740-81824759 None:intergenic 45.0%
! ATTTGCTTCAGCGCTAGCTT+CGG - chr4_1:81824755-81824774 None:intergenic 45.0%
! GCACTGTCTTCAGTTGATTC+TGG - chr4_1:81824784-81824803 None:intergenic 45.0%
!! GGAAAGAAGTGAATGGACTG+AGG + chr4_1:81824822-81824841 Msa0577450:CDS 45.0%
!! AGCTCTGAGTTCTTCGGAAA+GGG - chr4_1:81824866-81824885 None:intergenic 45.0%
! TGCCGAGAAGAAGTTTTCCA+AGG + chr4_1:81824936-81824955 Msa0577450:CDS 45.0%
CATTGCATCCTTCAGTTCCT+TGG - chr4_1:81824956-81824975 None:intergenic 45.0%
TAGCTATAGAAGGCCATGCA+CGG + chr4_1:81824980-81824999 Msa0577450:CDS 45.0%
TGCACTTCTTACTGCTGTTC+TGG - chr4_1:81825106-81825125 None:intergenic 45.0%
GTAGCTGGCATTCATAAGGT+TGG + chr4_1:81825532-81825551 Msa0577450:intron 45.0%
GGCCATCAGTATGAATTTGG+AGG + chr4_1:81825553-81825572 Msa0577450:intron 45.0%
GGCCATCAGTATGAATTTGG+AGG + chr4_1:81825553-81825572 Msa0577450:intron 45.0%
! TGGTGATGTAGTTTGTGCCA+GGG + chr4_1:81825846-81825865 Msa0577450:intron 45.0%
TTACATACCAAGATGCTCCC+TGG - chr4_1:81825866-81825885 None:intergenic 45.0%
TTCCCAGCCCATTCAACATA+TGG - chr4_1:81825900-81825919 None:intergenic 45.0%
AACGTGAGAAAGTGAGTTGC+TGG - chr4_1:81825928-81825947 None:intergenic 45.0%
GGAGTAGATCCCACCAAATA+AGG + chr4_1:81826001-81826020 Msa0577450:intron 45.0%
! CAGCCCAGTTCACTCTTTTA+AGG + chr4_1:81826374-81826393 Msa0577450:intron 45.0%
TTGATGTGATCTGCAGAAGC+GGG + chr4_1:81826405-81826424 Msa0577450:intron 45.0%
! TAGGCAAACGTGATTTGGCA+AGG - chr4_1:81826525-81826544 None:intergenic 45.0%
TGCCAAATCACGTTTGCCTA+TGG + chr4_1:81826525-81826544 Msa0577450:CDS 45.0%
! GCCTACTGATTATGACACCA+AGG + chr4_1:81826585-81826604 Msa0577450:CDS 45.0%
!! TAAAAATTAGTTAAAAATTT+CGG - chr4_1:81819289-81819308 None:intergenic 5.0%
!!! TTGTTTATTTTAATAATTTT+TGG + chr4_1:81821228-81821247 Msa0577450:intron 5.0%
GGGAATCTGAACGGAAATGG+TGG - chr4_1:81819034-81819053 None:intergenic 50.0%
GACGGGAATCTGAACGGAAA+TGG - chr4_1:81819037-81819056 None:intergenic 50.0%
! CGTTGCAAGCTTTTTGCGAC+GGG - chr4_1:81819054-81819073 None:intergenic 50.0%
TATGGTGAGAGGGAGGCTTA+GGG - chr4_1:81819163-81819182 None:intergenic 50.0%
TTATGGTGAGAGGGAGGCTT+AGG - chr4_1:81819164-81819183 None:intergenic 50.0%
GCTTGCGTTTGAGAGGGTTA+TGG - chr4_1:81819181-81819200 None:intergenic 50.0%
CATCGAGCTTGCGTTTGAGA+GGG - chr4_1:81819187-81819206 None:intergenic 50.0%
TCATCGAGCTTGCGTTTGAG+AGG - chr4_1:81819188-81819207 None:intergenic 50.0%
CGCTCACATTGATGCTACTC+AGG + chr4_1:81819449-81819468 Msa0577450:CDS 50.0%
GTGGGAAGACCTACACTATG+TGG + chr4_1:81819740-81819759 Msa0577450:CDS 50.0%
GGGAAGACCTACACTATGTG+GGG + chr4_1:81819742-81819761 Msa0577450:CDS 50.0%
GAGTCGCTCAAAAACACGAG+GGG - chr4_1:81819824-81819843 None:intergenic 50.0%
! TGCGTGAAATGCTTGTTGGC+AGG + chr4_1:81821000-81821019 Msa0577450:intron 50.0%
TGTTGCCAGCTTCCTTCAGA+CGG - chr4_1:81822114-81822133 None:intergenic 50.0%
AGCAGCGGCATATACCATAC+AGG + chr4_1:81822724-81822743 Msa0577450:CDS 50.0%
GCAGCGGCATATACCATACA+GGG + chr4_1:81822725-81822744 Msa0577450:CDS 50.0%
GTCAACTTGGAGTCCCTGTA+TGG - chr4_1:81822741-81822760 None:intergenic 50.0%
TTATTGCAGGAGTCTCTGGG+TGG + chr4_1:81822765-81822784 Msa0577450:CDS 50.0%
CGACTCAGCATTGCAGTTGT+AGG + chr4_1:81822904-81822923 Msa0577450:intron 50.0%
TGAAGATGGCGATGAGGAGA+TGG + chr4_1:81823268-81823287 Msa0577450:CDS 50.0%
TGAGGAGATGGAGATTGTCG+AGG + chr4_1:81823280-81823299 Msa0577450:CDS 50.0%
GAGATGGAGATTGTCGAGGA+TGG + chr4_1:81823284-81823303 Msa0577450:CDS 50.0%
GCTCGAATTGCCGAGAATTC+TGG - chr4_1:81823324-81823343 None:intergenic 50.0%
! TGTGATAACCCTGCTAGCCT+CGG + chr4_1:81823407-81823426 Msa0577450:CDS 50.0%
! ATTTTACGCCGAGGCTAGCA+GGG - chr4_1:81823418-81823437 None:intergenic 50.0%
! CAGTAGCACATTTTACGCCG+AGG - chr4_1:81823427-81823446 None:intergenic 50.0%
TTGGTGAAACACTGGGAGGT+GGG - chr4_1:81823466-81823485 None:intergenic 50.0%
TTAACAGCTAGCATCCGGCA+TGG + chr4_1:81823665-81823684 Msa0577450:CDS 50.0%
! ACCATTGCAGCGCAGCTTTT+GGG + chr4_1:81823708-81823727 Msa0577450:CDS 50.0%
! CTTTTGGGCGATCATCGTTG+AGG + chr4_1:81823723-81823742 Msa0577450:CDS 50.0%
GTCCACTGGAAAAGTTGGCT+TGG - chr4_1:81823771-81823790 None:intergenic 50.0%
!! GCTGCAGAGAAAGTTTTGGC+AGG + chr4_1:81824066-81824085 Msa0577450:CDS 50.0%
! CACCATCCATAAGGCTCTGA+AGG - chr4_1:81824321-81824340 None:intergenic 50.0%
GTCCCTTGCTCATGAACATG+AGG + chr4_1:81824378-81824397 Msa0577450:CDS 50.0%
TTCTTGCAGATGCCGGTGAA+TGG - chr4_1:81824654-81824673 None:intergenic 50.0%
TTCACCGGCATCTGCAAGAA+AGG + chr4_1:81824654-81824673 Msa0577450:CDS 50.0%
! GCGCTAGCTTCGGTTGAATT+GGG - chr4_1:81824745-81824764 None:intergenic 50.0%
! AGCGCTAGCTTCGGTTGAAT+TGG - chr4_1:81824746-81824765 None:intergenic 50.0%
!! AATGGACTGAGGCAGAAAGC+AGG + chr4_1:81824833-81824852 Msa0577450:CDS 50.0%
!! CAGCTCTGAGTTCTTCGGAA+AGG - chr4_1:81824867-81824886 None:intergenic 50.0%
AGGGCTTCAGGATCAACTGA+AGG + chr4_1:81825218-81825237 Msa0577450:CDS 50.0%
!! AGAAGGTGTCATCACTGCTC+AGG + chr4_1:81825299-81825318 Msa0577450:CDS 50.0%
CAGTGTCAATGGAACAGGCA+AGG - chr4_1:81825443-81825462 None:intergenic 50.0%
! GTGGTGATGTAGTTTGTGCC+AGG + chr4_1:81825845-81825864 Msa0577450:intron 50.0%
! GGCCATATGTTGAATGGGCT+GGG + chr4_1:81825895-81825914 Msa0577450:intron 50.0%
GTGGGATCTACTCCCAAAAG+TGG - chr4_1:81825995-81826014 None:intergenic 50.0%
ACTGAAGGAATGGGAGTGGA+AGG + chr4_1:81826148-81826167 Msa0577450:intron 50.0%
GAATGGGAGTGGAAGGAAGA+GGG + chr4_1:81826155-81826174 Msa0577450:intron 50.0%
AATGGGAGTGGAAGGAAGAG+GGG + chr4_1:81826156-81826175 Msa0577450:intron 50.0%
TGCAGAACAGGAAGCTGCAA+AGG + chr4_1:81826435-81826454 Msa0577450:CDS 50.0%
ATGGTGAGAGGGAGGCTTAG+GGG - chr4_1:81819162-81819181 None:intergenic 55.0%
AGAGGGTTATGGTGAGAGGG+AGG - chr4_1:81819170-81819189 None:intergenic 55.0%
CACACTACCTCCTCCGATTC+CGG + chr4_1:81819212-81819231 Msa0577450:CDS 55.0%
AACCACCTTGACGCCGGAAT+CGG - chr4_1:81819228-81819247 None:intergenic 55.0%
!! TCGACCTCCAAAGCATTGGG+AGG - chr4_1:81819769-81819788 None:intergenic 55.0%
TGCAGCAGGATACCGTCTGA+AGG + chr4_1:81822099-81822118 Msa0577450:intron 55.0%
GGATACCGTCTGAAGGAAGC+TGG + chr4_1:81822106-81822125 Msa0577450:intron 55.0%
CGTCAGTGAGAACCATGTGC+AGG + chr4_1:81822352-81822371 Msa0577450:intron 55.0%
! GCTTTGCGCTATTTCCCCTG+CGG + chr4_1:81822806-81822825 Msa0577450:CDS 55.0%
! GCACTGGCCAGGAAAAGAGA+AGG - chr4_1:81823077-81823096 None:intergenic 55.0%
! CATTTTACGCCGAGGCTAGC+AGG - chr4_1:81823419-81823438 None:intergenic 55.0%
ACTGGGAGGTGGGGATTTGA+GGG - chr4_1:81823456-81823475 None:intergenic 55.0%
TGGTGAAACACTGGGAGGTG+GGG - chr4_1:81823465-81823484 None:intergenic 55.0%
! GTTGGTGAAACACTGGGAGG+TGG - chr4_1:81823467-81823486 None:intergenic 55.0%
CAAAAGCTGCGCTGCAATGG+TGG - chr4_1:81823709-81823728 None:intergenic 55.0%
! CACCATTGCAGCGCAGCTTT+TGG + chr4_1:81823707-81823726 Msa0577450:CDS 55.0%
GCAGACTCAGGGCAATCAAC+AGG - chr4_1:81823935-81823954 None:intergenic 55.0%
TCAGCGCCTTCAGAGCCTTA+TGG + chr4_1:81824312-81824331 Msa0577450:CDS 55.0%
! CGCCTTCAGAGCCTTATGGA+TGG + chr4_1:81824316-81824335 Msa0577450:CDS 55.0%
!! TGGGGAGAGGGAAGTGCTAA+TGG + chr4_1:81824585-81824604 Msa0577450:CDS 55.0%
! TCTGAAGCAGTGCAAGCTGC+AGG + chr4_1:81825246-81825265 Msa0577450:CDS 55.0%
!! GTTTGTGCCAGGGAGCATCT+TGG + chr4_1:81825856-81825875 Msa0577450:intron 55.0%
GGGCCATATGTTGAATGGGC+TGG + chr4_1:81825894-81825913 Msa0577450:intron 55.0%
GGAATGGGAGTGGAAGGAAG+AGG + chr4_1:81826154-81826173 Msa0577450:intron 55.0%
TGATCTGCAGAAGCGGGCAA+TGG + chr4_1:81826411-81826430 Msa0577450:intron 55.0%
TGGTGAGAGGGAGGCTTAGG+GGG - chr4_1:81819161-81819180 None:intergenic 60.0%
GGGAGGACCCCACATAGTGT+AGG - chr4_1:81819752-81819771 None:intergenic 60.0%
GTGGGGTCCTCCCAATGCTT+TGG + chr4_1:81819759-81819778 Msa0577450:CDS 60.0%
GGGTCCTCCCAATGCTTTGG+AGG + chr4_1:81819762-81819781 Msa0577450:CDS 60.0%
AGCATGTTGCTGTGGCCCTG+TGG + chr4_1:81820709-81820728 Msa0577450:intron 60.0%
GCATGTTGCTGTGGCCCTGT+GGG + chr4_1:81820710-81820729 Msa0577450:intron 60.0%
! GCGCTATTTCCCCTGCGGAA+AGG + chr4_1:81822811-81822830 Msa0577450:CDS 60.0%
GCTGCTGAATGGCCTCCACT+TGG - chr4_1:81823179-81823198 None:intergenic 60.0%
GAGGTGGGGATTTGAGGGTG+GGG - chr4_1:81823451-81823470 None:intergenic 60.0%
GGAGGTGGGGATTTGAGGGT+GGG - chr4_1:81823452-81823471 None:intergenic 60.0%
CACTGGGAGGTGGGGATTTG+AGG - chr4_1:81823457-81823476 None:intergenic 60.0%
GCCCAAAAGCTGCGCTGCAA+TGG - chr4_1:81823712-81823731 None:intergenic 60.0%
GGACTGAGGCAGAAAGCAGG+TGG + chr4_1:81824836-81824855 Msa0577450:CDS 60.0%
GCGGGCAATGGATGCAGAAC+AGG + chr4_1:81826423-81826442 Msa0577450:CDS 60.0%
CTTGACGCCGGAATCGGAGG+AGG - chr4_1:81819222-81819241 None:intergenic 65.0%
CTCCTCCGATTCCGGCGTCA+AGG + chr4_1:81819220-81819239 Msa0577450:CDS 65.0%
CACCTTGACGCCGGAATCGG+AGG - chr4_1:81819225-81819244 None:intergenic 65.0%
CTCCGATTCCGGCGTCAAGG+TGG + chr4_1:81819223-81819242 Msa0577450:intron 65.0%
GGGAGGTGGGGATTTGAGGG+TGG - chr4_1:81823453-81823472 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 81818961 81826781 81818961 ID=Msa0577450;Name=Msa0577450
chr4_1 mRNA 81818961 81826781 81818961 ID=Msa0577450-mRNA-1;Parent=Msa0577450;Name=Msa0577450-mRNA-1;_AED=0.10;_eAED=0.10;_QI=113|0.85|0.93|1|1|1|15|67|1112
chr4_1 exon 81818961 81819241 81818961 ID=Msa0577450-mRNA-1:exon:29470;Parent=Msa0577450-mRNA-1
chr4_1 exon 81819333 81819470 81819333 ID=Msa0577450-mRNA-1:exon:29471;Parent=Msa0577450-mRNA-1
chr4_1 exon 81819562 81819645 81819562 ID=Msa0577450-mRNA-1:exon:29472;Parent=Msa0577450-mRNA-1
chr4_1 exon 81819733 81819861 81819733 ID=Msa0577450-mRNA-1:exon:29473;Parent=Msa0577450-mRNA-1
chr4_1 exon 81819958 81820017 81819958 ID=Msa0577450-mRNA-1:exon:29474;Parent=Msa0577450-mRNA-1
chr4_1 exon 81820245 81820337 81820245 ID=Msa0577450-mRNA-1:exon:29475;Parent=Msa0577450-mRNA-1
chr4_1 exon 81821365 81821460 81821365 ID=Msa0577450-mRNA-1:exon:29476;Parent=Msa0577450-mRNA-1
chr4_1 exon 81822013 81822074 81822013 ID=Msa0577450-mRNA-1:exon:29477;Parent=Msa0577450-mRNA-1
chr4_1 exon 81822683 81822832 81822683 ID=Msa0577450-mRNA-1:exon:29478;Parent=Msa0577450-mRNA-1
chr4_1 exon 81822920 81823049 81822920 ID=Msa0577450-mRNA-1:exon:29479;Parent=Msa0577450-mRNA-1
chr4_1 exon 81823140 81823982 81823140 ID=Msa0577450-mRNA-1:exon:29480;Parent=Msa0577450-mRNA-1
chr4_1 exon 81824066 81824164 81824066 ID=Msa0577450-mRNA-1:exon:29481;Parent=Msa0577450-mRNA-1
chr4_1 exon 81824247 81824399 81824247 ID=Msa0577450-mRNA-1:exon:29482;Parent=Msa0577450-mRNA-1
chr4_1 exon 81824481 81825320 81824481 ID=Msa0577450-mRNA-1:exon:29483;Parent=Msa0577450-mRNA-1
chr4_1 exon 81826421 81826781 81826421 ID=Msa0577450-mRNA-1:exon:29484;Parent=Msa0577450-mRNA-1
chr4_1 five_prime_UTR 81818961 81819073 81818961 ID=Msa0577450-mRNA-1:five_prime_utr;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81819074 81819241 81819074 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81819333 81819470 81819333 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81819562 81819645 81819562 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81819733 81819861 81819733 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81819958 81820017 81819958 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81820245 81820337 81820245 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81821365 81821460 81821365 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81822013 81822074 81822013 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81822683 81822832 81822683 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81822920 81823049 81822920 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81823140 81823982 81823140 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81824066 81824164 81824066 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81824247 81824399 81824247 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81824481 81825320 81824481 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 CDS 81826421 81826714 81826421 ID=Msa0577450-mRNA-1:cds;Parent=Msa0577450-mRNA-1
chr4_1 three_prime_UTR 81826715 81826781 81826715 ID=Msa0577450-mRNA-1:three_prime_utr;Parent=Msa0577450-mRNA-1
Gene Sequence

>Msa0577450

ATGACAATGAAGAATTTGCCGACTGTACCAAGAAATTCAAACCCTAAATCAACGCATAAGCACAAATTCAACAAAGAGAATAAACCCCCTAAGCCTCCCTCTCACCATAACCCTCTCAAACGCAAGCTCGATGATACTCACACTACCTCCTCCGATTCCGGCGTCAAGGTTATTGTGAGGATGAAACCAGTGAGCAGTGAAAAAGACGAAGCAGATTCCATTGTTAAGAAAATTTCCAGCAATTCTTTGTCAATCAACGGTCAGGATTTCACCTTTGATTCCATCGCTCACATTGATGCTACTCAGCTTGATATTTTTGAGCTTATTGGTATGCCTCTAGTAGAGAATTGTTTGGCTGGGTTCAATAGTTCTGTTTTTGCTTATGGGCAGACTGGAAGTGGGAAGACCTACACTATGTGGGGTCCTCCCAATGCTTTGGAGGTCGAAAATTCATCAATTGATCAACAAGGAGGTCTCGCCCCTCGTGTTTTTGAGCGACTCTTTGCACGCCTAAATGAAGAGCAAACTAAGCACTCCGACAAGCAACTCAAGTATCAATGTCACTGTTCATTTCTTGAGATTAGAGAAGATGTTAAATCTGGAATCTACGTCGAGAATCTTACAGAGGAGCATGTTTTTACTGTGAAGGATGTAAATCAGCTTTTGATGAAGGGATTGTTAAACAGAACAATAGGTGCAACCAGTGTAAATTCTGAAAGCTCCCGTTCACACACTGTTTTTACTTGTGTTGTTGAATCTCGATGCAAGAGTATTGAAGATCGTAAAAGCAGATTTAAAACAAGTAAAATCAATCTCGTTGATTTAGCTGGGAATCTGATTAACATTCTTGCTGAAGTTTCTCAGACAGGAAAGCAGCGGCATATACCATACAGGGACTCCAAGTTGACATTTTTATTGCAGGAGTCTCTGGGTGGAAATGCAAAATTAACATTGCTTTGCGCTATTTCCCCTGCGGAAAGTTGTAGGAGTGAAACTTTTAGTACATTGAGATTTGCACAACGTGTCAAAGCTATCAAGAACAAAGCGGTTGTAAATGAAGTAATGCATGATGATGTGAACCAATTGCGTGAAGTAATACGCGAACTCAAGGATGAGCTGCATCGAGTTAAAACAAAGGGTTACAATCCAAGTGGAGGCCATTCAGCAGCTTTGATCCGAAGAAGTTTGTGTTTATTGCAGCCTAGACTCCACTACCCATTATCACTACCTCATGTTGATGAAGATGGCGATGAGGAGATGGAGATTGTCGAGGATGGTGTTGAAGATCATGCCAGAATTCTCGGCAATTCGAGCAGAGATTGTGCTGGTTTTTCTGACACTAAGCGATACATTGATTTTCCTAATGCTACAATGAACTGTGATAACCCTGCTAGCCTCGGCGTAAAATGTGCTACTGACCCCACCCTCAAATCCCCACCTCCCAGTGTTTCACCAACAATCAGCAGCAGCAGAAAAAGTTTGAAGACCTTATCAAAGCTGTCCCCATCTCAGAATAACCTTCATTGTGAAAGTGACTTAGGCATGATGCCGGTCACAAAGACTGTTGATCAGAAAAGCATGTCTAATGCTCTGTCTAGCCTGAAAGCTTCAAATTTCCTTACTAAAACTGAGAACTTAACAGCTAGCATCCGGCATGGTCTTGAAACTATTGATAACCACCATTGCAGCGCAGCTTTTGGGCGATCATCGTTGAGGCTCTCATTGAGACCTGAAGATTCCAAGCCAACTTTTCCAGTGGACAAAGTTAATGTGGGAGTACAGACTTTCGTCGATGATAATGCTGGAAAAGAAGATTCTGTTATGTTGAACTGTAATAACTGTAAAATCAGAATGCAGCTTGATGTCAGTAAGATTGACAATAACTCAAACATGCAAATGATACCTGTTGATTGCCCTGAGTCTGCTGATAAACCAAAGAAGCAAGTTCTCAAAGCTGCAGAGAAAGTTTTGGCAGGATCCATAAGGAGAGAAATGGCTCTGGAAGAGTTATGTGCAAAGCAGACTTCTGAGATAATGCAGCTCAATCACTTATTGGAACAATACAAGCATGAGAGGGAATGCAATGCCGTAATAGGTCAGACAAGGGAAGGTAAAATTCAGCGCCTTCAGAGCCTTATGGATGGTGTTTTACCCACTGAGAAATTCATGAGCGAAGAACTAGTGTCCCTTGCTCATGAACATGAGCTTTTGAAGGAGAACTATGAGCATCATCCAGAAGTTCTGAAGATGAAGATAGAGTTAAAAAGAGTACAAGATAAGCTACAAGAGTATCAGAATTTCTATGAATTTGGGGAGAGGGAAGTGCTAATGGAAGAGATATGTAATTTAAGAAATCAGCTTCATTTTTATATAGACCATTCACCGGCATCTGCAAGAAAGGAATATCCATTGTTGCAGTTGCCTAATTCATCTGAACCTAGATTGGTAGCAAACCTAACTGCCAATCCCAATTCAACCGAAGCTAGCGCTGAAGCAAATGACAATCCAGAATCAACTGAAGACAGTGCCAAAGTAAAACTTGAACAGGAAAGAAGTGAATGGACTGAGGCAGAAAGCAGGTGGATTTCCCTTTCCGAAGAACTCAGAGCTGAAGTTGAAGCTAACAAGTCGTTAGCTGAAAAGAGGAAGCGTGAATTAGATGCCGAGAAGAAGTTTTCCAAGGAACTGAAGGATGCAATGCAAATAGCTATAGAAGGCCATGCACGGATTTTAGAACAGTATGCAGATTTGGAGGAGAAACATGTTCAGTTGCTTGAAAGGCATAGAAAGATCCATGATGGAATTGATGATATAAAGAAAGCAGCTTCCAGAACAGCAGTAAGAAGTGCAGAGTCTAAACTCATAACTACCCTTGCAGCAGAAATTTCAGCATTAAAAGCAGAAAAAGAAGCAGAAAGGAGAATCCTAGTAGATGAAAATAGAGGGCTTCAGGATCAACTGAAGGATACTTCTGAAGCAGTGCAAGCTGCAGGTGAACTGCTTGTACGTCTTAAAGAAGCAGAAGAAGGTGTCATCACTGCTCAGAAGCGGGCAATGGATGCAGAACAGGAAGCTGCAAAGGCCTACAAACAAATTGATAAATTGAAGAAGAAATACGAGATTGAGATTAGTACACTCAATGATCTCCTTGCCAAATCACGTTTGCCTATGGAAGAAGCAATACAACCTACTTGTAATGATCTTGTCATGCCTACTGATTATGACACCAAGGTTGCACACAATGTTAATCAATTTGAGCCATCTTATAATAAAGACGATGGTGAGCTTGCTAAATTAGAACAGTCATGGTTCTCTGGTTCTGACATATGCAACATATAG
Protein sequence

>Msa0577450

MTMKNLPTVPRNSNPKSTHKHKFNKENKPPKPPSHHNPLKRKLDDTHTTSSDSGVKVIVRMKPVSSEKDEADSIVKKISSNSLSINGQDFTFDSIAHIDATQLDIFELIGMPLVENCLAGFNSSVFAYGQTGSGKTYTMWGPPNALEVENSSIDQQGGLAPRVFERLFARLNEEQTKHSDKQLKYQCHCSFLEIREDVKSGIYVENLTEEHVFTVKDVNQLLMKGLLNRTIGATSVNSESSRSHTVFTCVVESRCKSIEDRKSRFKTSKINLVDLAGNLINILAEVSQTGKQRHIPYRDSKLTFLLQESLGGNAKLTLLCAISPAESCRSETFSTLRFAQRVKAIKNKAVVNEVMHDDVNQLREVIRELKDELHRVKTKGYNPSGGHSAALIRRSLCLLQPRLHYPLSLPHVDEDGDEEMEIVEDGVEDHARILGNSSRDCAGFSDTKRYIDFPNATMNCDNPASLGVKCATDPTLKSPPPSVSPTISSSRKSLKTLSKLSPSQNNLHCESDLGMMPVTKTVDQKSMSNALSSLKASNFLTKTENLTASIRHGLETIDNHHCSAAFGRSSLRLSLRPEDSKPTFPVDKVNVGVQTFVDDNAGKEDSVMLNCNNCKIRMQLDVSKIDNNSNMQMIPVDCPESADKPKKQVLKAAEKVLAGSIRREMALEELCAKQTSEIMQLNHLLEQYKHERECNAVIGQTREGKIQRLQSLMDGVLPTEKFMSEELVSLAHEHELLKENYEHHPEVLKMKIELKRVQDKLQEYQNFYEFGEREVLMEEICNLRNQLHFYIDHSPASARKEYPLLQLPNSSEPRLVANLTANPNSTEASAEANDNPESTEDSAKVKLEQERSEWTEAESRWISLSEELRAEVEANKSLAEKRKRELDAEKKFSKELKDAMQIAIEGHARILEQYADLEEKHVQLLERHRKIHDGIDDIKKAASRTAVRSAESKLITTLAAEISALKAEKEAERRILVDENRGLQDQLKDTSEAVQAAGELLVRLKEAEEGVITAQKRAMDAEQEAAKAYKQIDKLKKKYEIEISTLNDLLAKSRLPMEEAIQPTCNDLVMPTDYDTKVAHNVNQFEPSYNKDDGELAKLEQSWFSGSDICNI*