Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014920 | sp|Q2NI00|DHQS_METST | 38.211 | 369 | 177 | 9 | 52 | 380 | 2 | 359 | 2.61e-69 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011850 | Msa0014920 | 0.800732 | 1.255195e-48 | -8.615850e-47 |
| Msa0014920 | Msa0018220 | 0.800382 | 1.479327e-48 | -8.615850e-47 |
| Msa0014920 | Msa0024680 | 0.813492 | 2.490693e-51 | -8.615850e-47 |
| Msa0014920 | Msa0027540 | 0.829071 | 6.320376e-55 | -8.615850e-47 |
| Msa0014920 | Msa0028060 | 0.813898 | 2.027795e-51 | -8.615850e-47 |
| Msa0014920 | Msa0032120 | 0.832807 | 7.654870e-56 | -8.615850e-47 |
| Msa0014920 | Msa0032400 | 0.828500 | 8.685062e-55 | -8.615850e-47 |
| Msa0014920 | Msa0032840 | -0.818610 | 1.792248e-52 | -8.615850e-47 |
| Msa0014920 | Msa0038350 | -0.840561 | 8.072690e-58 | -8.615850e-47 |
| Msa0014920 | Msa0048020 | 0.814367 | 1.596955e-51 | -8.615850e-47 |
| Msa0014920 | Msa0052020 | 0.810844 | 9.418692e-51 | -8.615850e-47 |
| Msa0014920 | Msa0063580 | 0.867041 | 1.832799e-65 | -8.615850e-47 |
| Msa0014920 | Msa0073820 | 0.822680 | 2.081264e-53 | -8.615850e-47 |
| Msa0014920 | Msa0075310 | 0.815951 | 7.105533e-52 | -8.615850e-47 |
| Msa0014920 | Msa0091770 | 0.830654 | 2.599908e-55 | -8.615850e-47 |
| Msa0014920 | Msa0094100 | 0.815291 | 9.968106e-52 | -8.615850e-47 |
| Msa0014920 | Msa0097050 | 0.803943 | 2.738436e-49 | -8.615850e-47 |
| Msa0014920 | Msa0101810 | -0.814779 | 1.294897e-51 | -8.615850e-47 |
| Msa0014920 | Msa0105420 | 0.826705 | 2.343170e-54 | -8.615850e-47 |
| Msa0014920 | Msa0108450 | 0.821068 | 4.915056e-53 | -8.615850e-47 |
| Msa0014920 | Msa0114540 | -0.810679 | 1.022400e-50 | -8.615850e-47 |
| Msa0014920 | Msa0120330 | 0.818017 | 2.440603e-52 | -8.615850e-47 |
| Msa0014920 | Msa0137600 | 0.800892 | 1.164524e-48 | -8.615850e-47 |
| Msa0014920 | Msa0140220 | 0.809005 | 2.342791e-50 | -8.615850e-47 |
| Msa0014920 | Msa0141430 | 0.812442 | 4.231439e-51 | -8.615850e-47 |
| Msa0014920 | Msa0149620 | 0.823006 | 1.747479e-53 | -8.615850e-47 |
| Msa0014920 | Msa0168100 | 0.830081 | 3.589176e-55 | -8.615850e-47 |
| Msa0014920 | Msa0171780 | 0.814592 | 1.424637e-51 | -8.615850e-47 |
| Msa0014920 | Msa0172350 | 0.811511 | 6.749086e-51 | -8.615850e-47 |
| Msa0014920 | Msa0183610 | 0.820485 | 6.690361e-53 | -8.615850e-47 |
| Msa0014920 | Msa0183620 | 0.818347 | 2.055154e-52 | -8.615850e-47 |
| Msa0014920 | Msa0185700 | 0.835295 | 1.823429e-56 | -8.615850e-47 |
| Msa0014920 | Msa0190830 | 0.801655 | 8.125988e-49 | -8.615850e-47 |
| Msa0014920 | Msa0196130 | -0.816948 | 4.250756e-52 | -8.615850e-47 |
| Msa0014920 | Msa0200950 | -0.808375 | 3.193845e-50 | -8.615850e-47 |
| Msa0014920 | Msa0207000 | 0.846497 | 2.092891e-59 | -8.615850e-47 |
| Msa0014920 | Msa0208390 | 0.802830 | 4.655989e-49 | -8.615850e-47 |
| Msa0014920 | Msa0208630 | 0.802113 | 6.544032e-49 | -8.615850e-47 |
| Msa0014920 | Msa0227500 | 0.810196 | 1.299804e-50 | -8.615850e-47 |
| Msa0014920 | Msa0230550 | -0.817855 | 2.655769e-52 | -8.615850e-47 |
| Msa0014920 | Msa0233190 | 0.802247 | 6.140922e-49 | -8.615850e-47 |
| Msa0014920 | Msa0239130 | 0.811652 | 6.289680e-51 | -8.615850e-47 |
| Msa0014920 | Msa0239660 | 0.812086 | 5.058734e-51 | -8.615850e-47 |
| Msa0014920 | Msa0246690 | 0.822779 | 1.973466e-53 | -8.615850e-47 |
| Msa0014920 | Msa0258670 | -0.805594 | 1.237749e-49 | -8.615850e-47 |
| Msa0014920 | Msa0264350 | 0.818758 | 1.658177e-52 | -8.615850e-47 |
| Msa0014920 | Msa0265820 | 0.819194 | 1.319957e-52 | -8.615850e-47 |
| Msa0014920 | Msa0267760 | 0.821661 | 3.586055e-53 | -8.615850e-47 |
| Msa0014920 | Msa0269360 | 0.823124 | 1.639485e-53 | -8.615850e-47 |
| Msa0014920 | Msa0277640 | 0.809715 | 1.649847e-50 | -8.615850e-47 |
| Msa0014920 | Msa0298940 | 0.812243 | 4.675180e-51 | -8.615850e-47 |
| Msa0014920 | Msa0298970 | 0.822975 | 1.776699e-53 | -8.615850e-47 |
| Msa0014920 | Msa0301180 | 0.814186 | 1.751183e-51 | -8.615850e-47 |
| Msa0014920 | Msa0302450 | 0.807589 | 4.694671e-50 | -8.615850e-47 |
| Msa0014920 | Msa0311580 | 0.811606 | 6.435080e-51 | -8.615850e-47 |
| Msa0014920 | Msa0319200 | 0.825243 | 5.212487e-54 | -8.615850e-47 |
| Msa0014920 | Msa0320540 | 0.802510 | 5.421545e-49 | -8.615850e-47 |
| Msa0014920 | Msa0342200 | 0.858771 | 6.551364e-63 | -8.615850e-47 |
| Msa0014920 | Msa0369570 | 0.815541 | 8.768799e-52 | -8.615850e-47 |
| Msa0014920 | Msa0374070 | 0.804572 | 2.025725e-49 | -8.615850e-47 |
| Msa0014920 | Msa0376510 | 0.803909 | 2.783583e-49 | -8.615850e-47 |
| Msa0014920 | Msa0378080 | 0.807909 | 4.014965e-50 | -8.615850e-47 |
| Msa0014920 | Msa0380310 | 0.801350 | 9.387378e-49 | -8.615850e-47 |
| Msa0014920 | Msa0416520 | 0.801743 | 7.796414e-49 | -8.615850e-47 |
| Msa0014920 | Msa0419820 | 0.802944 | 4.411539e-49 | -8.615850e-47 |
| Msa0014920 | Msa0423250 | 0.805198 | 1.498369e-49 | -8.615850e-47 |
| Msa0014920 | Msa0423360 | -0.845194 | 4.728287e-59 | -8.615850e-47 |
| Msa0014920 | Msa0425050 | 0.809325 | 2.000661e-50 | -8.615850e-47 |
| Msa0014920 | Msa0436280 | -0.824790 | 6.667034e-54 | -8.615850e-47 |
| Msa0014920 | Msa0437710 | 0.835205 | 1.922049e-56 | -8.615850e-47 |
| Msa0014920 | Msa0450050 | 0.821288 | 4.372137e-53 | -8.615850e-47 |
| Msa0014920 | Msa0470180 | 0.811269 | 7.617461e-51 | -8.615850e-47 |
| Msa0014920 | Msa0490300 | 0.801166 | 1.023593e-48 | -8.615850e-47 |
| Msa0014920 | Msa0490350 | 0.818473 | 1.924839e-52 | -8.615850e-47 |
| Msa0014920 | Msa0508200 | 0.808793 | 2.601224e-50 | -8.615850e-47 |
| Msa0014920 | Msa0509970 | 0.839540 | 1.490706e-57 | -8.615850e-47 |
| Msa0014920 | Msa0511870 | 0.800858 | 1.183108e-48 | -8.615850e-47 |
| Msa0014920 | Msa0515090 | 0.805449 | 1.327540e-49 | -8.615850e-47 |
| Msa0014920 | Msa0518040 | 0.808092 | 3.669767e-50 | -8.615850e-47 |
| Msa0014920 | Msa0521880 | 0.812846 | 3.451237e-51 | -8.615850e-47 |
| Msa0014920 | Msa0524120 | 0.810170 | 1.317021e-50 | -8.615850e-47 |
| Msa0014920 | Msa0526640 | -0.839352 | 1.668042e-57 | -8.615850e-47 |
| Msa0014920 | Msa0526710 | 0.823011 | 1.742164e-53 | -8.615850e-47 |
| Msa0014920 | Msa0527590 | 0.805427 | 1.342139e-49 | -8.615850e-47 |
| Msa0014920 | Msa0527600 | 0.825973 | 3.499132e-54 | -8.615850e-47 |
| Msa0014920 | Msa0535030 | 0.824419 | 8.154289e-54 | -8.615850e-47 |
| Msa0014920 | Msa0535060 | 0.828446 | 8.948754e-55 | -8.615850e-47 |
| Msa0014920 | Msa0537580 | 0.804947 | 1.691432e-49 | -8.615850e-47 |
| Msa0014920 | Msa0546380 | 0.840653 | 7.636822e-58 | -8.615850e-47 |
| Msa0014920 | Msa0575250 | 0.818187 | 2.233689e-52 | -8.615850e-47 |
| Msa0014920 | Msa0581760 | 0.806417 | 8.310582e-50 | -8.615850e-47 |
| Msa0014920 | Msa0583930 | 0.802310 | 5.961899e-49 | -8.615850e-47 |
| Msa0014920 | Msa0583940 | 0.815472 | 9.084868e-52 | -8.615850e-47 |
| Msa0014920 | Msa0591770 | 0.806591 | 7.636826e-50 | -8.615850e-47 |
| Msa0014920 | Msa0607200 | 0.800915 | 1.151665e-48 | -8.615850e-47 |
| Msa0014920 | Msa0619330 | 0.807654 | 4.548378e-50 | -8.615850e-47 |
| Msa0014920 | Msa0621890 | 0.811162 | 8.037452e-51 | -8.615850e-47 |
| Msa0014920 | Msa0629370 | 0.803546 | 3.311334e-49 | -8.615850e-47 |
| Msa0014920 | Msa0642650 | 0.815347 | 9.685098e-52 | -8.615850e-47 |
| Msa0014920 | Msa0657670 | 0.821732 | 3.452576e-53 | -8.615850e-47 |
| Msa0014920 | Msa0669850 | 0.807305 | 5.394594e-50 | -8.615850e-47 |
| Msa0014920 | Msa0670980 | 0.810329 | 1.217111e-50 | -8.615850e-47 |
| Msa0014920 | Msa0677820 | 0.815735 | 7.937096e-52 | -8.615850e-47 |
| Msa0014920 | Msa0681890 | 0.810461 | 1.139329e-50 | -8.615850e-47 |
| Msa0014920 | Msa0707780 | 0.810423 | 1.161176e-50 | -8.615850e-47 |
| Msa0014920 | Msa0709480 | 0.805044 | 1.614144e-49 | -8.615850e-47 |
| Msa0014920 | Msa0730180 | 0.833691 | 4.612282e-56 | -8.615850e-47 |
| Msa0014920 | Msa0735470 | 0.802323 | 5.924592e-49 | -8.615850e-47 |
| Msa0014920 | Msa0746600 | 0.812769 | 3.588249e-51 | -8.615850e-47 |
| Msa0014920 | Msa0748930 | 0.810073 | 1.382023e-50 | -8.615850e-47 |
| Msa0014920 | Msa0756630 | -0.823982 | 1.032818e-53 | -8.615850e-47 |
| Msa0014920 | Msa0770430 | 0.823391 | 1.420856e-53 | -8.615850e-47 |
| Msa0014920 | Msa0789570 | 0.822637 | 2.129826e-53 | -8.615850e-47 |
| Msa0014920 | Msa0792510 | 0.817684 | 2.903095e-52 | -8.615850e-47 |
| Msa0014920 | Msa0808420 | 0.812577 | 3.952739e-51 | -8.615850e-47 |
| Msa0014920 | Msa0837990 | 0.816849 | 4.473291e-52 | -8.615850e-47 |
| Msa0014920 | Msa0843690 | 0.827220 | 1.764786e-54 | -8.615850e-47 |
| Msa0014920 | Msa0854570 | 0.838468 | 2.825717e-57 | -8.615850e-47 |
| Msa0014920 | Msa0855020 | 0.815694 | 8.108842e-52 | -8.615850e-47 |
| Msa0014920 | Msa0883030 | 0.823194 | 1.579425e-53 | -8.615850e-47 |
| Msa0014920 | Msa0890250 | 0.844067 | 9.507648e-59 | -8.615850e-47 |
| Msa0014920 | Msa0901100 | 0.800454 | 1.430208e-48 | -8.615850e-47 |
| Msa0014920 | Msa0907700 | 0.803545 | 3.312148e-49 | -8.615850e-47 |
| Msa0014920 | Msa0925160 | 0.849858 | 2.468080e-60 | -8.615850e-47 |
| Msa0014920 | Msa0936270 | 0.813445 | 2.550241e-51 | -8.615850e-47 |
| Msa0014920 | Msa0955260 | 0.818468 | 1.929432e-52 | -8.615850e-47 |
| Msa0014920 | Msa0969570 | 0.801188 | 1.013229e-48 | -8.615850e-47 |
| Msa0014920 | Msa0977320 | 0.822557 | 2.222847e-53 | -8.615850e-47 |
| Msa0014920 | Msa0990520 | 0.814093 | 1.836473e-51 | -8.615850e-47 |
| Msa0014920 | Msa1004900 | -0.803561 | 3.287854e-49 | -8.615850e-47 |
| Msa0014920 | Msa1008490 | 0.832343 | 9.980875e-56 | -8.615850e-47 |
| Msa0014920 | Msa1010730 | 0.810638 | 1.043618e-50 | -8.615850e-47 |
| Msa0014920 | Msa1014270 | 0.805935 | 1.049914e-49 | -8.615850e-47 |
| Msa0014920 | Msa1018790 | 0.806778 | 6.971656e-50 | -8.615850e-47 |
| Msa0014920 | Msa1019020 | 0.819955 | 8.850127e-53 | -8.615850e-47 |
| Msa0014920 | Msa1020710 | 0.833598 | 4.865735e-56 | -8.615850e-47 |
| Msa0014920 | Msa1028460 | 0.809029 | 2.315286e-50 | -8.615850e-47 |
| Msa0014920 | Msa1036390 | 0.824920 | 6.213599e-54 | -8.615850e-47 |
| Msa0014920 | Msa1038050 | 0.837844 | 4.088999e-57 | -8.615850e-47 |
| Msa0014920 | Msa1040120 | 0.826553 | 2.546488e-54 | -8.615850e-47 |
| Msa0014920 | Msa1044340 | 0.808533 | 2.955477e-50 | -8.615850e-47 |
| Msa0014920 | Msa1054240 | 0.804525 | 2.072279e-49 | -8.615850e-47 |
| Msa0014920 | Msa1055260 | 0.813083 | 3.063085e-51 | -8.615850e-47 |
| Msa0014920 | Msa1055280 | 0.808345 | 3.241248e-50 | -8.615850e-47 |
| Msa0014920 | Msa1073840 | 0.814101 | 1.828986e-51 | -8.615850e-47 |
| Msa0014920 | Msa1076680 | 0.813416 | 2.588569e-51 | -8.615850e-47 |
| Msa0014920 | Msa1084490 | 0.805427 | 1.342165e-49 | -8.615850e-47 |
| Msa0014920 | Msa1097640 | 0.801027 | 1.092620e-48 | -8.615850e-47 |
| Msa0014920 | Msa1098560 | 0.820171 | 7.896225e-53 | -8.615850e-47 |
| Msa0014920 | Msa1099030 | 0.827780 | 1.294864e-54 | -8.615850e-47 |
| Msa0014920 | Msa1104000 | 0.804640 | 1.960624e-49 | -8.615850e-47 |
| Msa0014920 | Msa1125780 | 0.825423 | 4.726379e-54 | -8.615850e-47 |
| Msa0014920 | Msa1125950 | 0.822318 | 2.525980e-53 | -8.615850e-47 |
| Msa0014920 | Msa1129560 | 0.831071 | 2.055038e-55 | -8.615850e-47 |
| Msa0014920 | Msa1129720 | 0.827356 | 1.636826e-54 | -8.615850e-47 |
| Msa0014920 | Msa1139810 | 0.801924 | 7.156702e-49 | -8.615850e-47 |
| Msa0014920 | Msa1147570 | 0.810324 | 1.219840e-50 | -8.615850e-47 |
| Msa0014920 | Msa1159100 | 0.832421 | 9.542514e-56 | -8.615850e-47 |
| Msa0014920 | Msa1171340 | 0.822787 | 1.965087e-53 | -8.615850e-47 |
| Msa0014920 | Msa1171690 | 0.813283 | 2.768838e-51 | -8.615850e-47 |
| Msa0014920 | Msa1183390 | 0.825850 | 3.744150e-54 | -8.615850e-47 |
| Msa0014920 | Msa1188940 | 0.801792 | 7.616399e-49 | -8.615850e-47 |
| Msa0014920 | Msa1201990 | 0.807365 | 5.239040e-50 | -8.615850e-47 |
| Msa0014920 | Msa1208980 | 0.809998 | 1.434392e-50 | -8.615850e-47 |
| Msa0014920 | Msa1210770 | 0.811781 | 5.896130e-51 | -8.615850e-47 |
| Msa0014920 | Msa1220230 | 0.809375 | 1.951956e-50 | -8.615850e-47 |
| Msa0014920 | Msa1222970 | 0.800519 | 1.387717e-48 | -8.615850e-47 |
| Msa0014920 | Msa1223460 | 0.807677 | 4.496275e-50 | -8.615850e-47 |
| Msa0014920 | Msa1237030 | 0.827076 | 1.910354e-54 | -8.615850e-47 |
| Msa0014920 | Msa1254770 | 0.808403 | 3.150450e-50 | -8.615850e-47 |
| Msa0014920 | Msa1254800 | 0.802330 | 5.905819e-49 | -8.615850e-47 |
| Msa0014920 | Msa1263660 | 0.802892 | 4.522130e-49 | -8.615850e-47 |
| Msa0014920 | Msa1264020 | 0.820368 | 7.117460e-53 | -8.615850e-47 |
| Msa0014920 | Msa1265960 | 0.814364 | 1.599920e-51 | -8.615850e-47 |
| Msa0014920 | Msa1269580 | -0.809907 | 1.500439e-50 | -8.615850e-47 |
| Msa0014920 | Msa1271510 | 0.816065 | 6.699105e-52 | -8.615850e-47 |
| Msa0014920 | Msa1280120 | 0.815036 | 1.135458e-51 | -8.615850e-47 |
| Msa0014920 | Msa1283770 | 0.801276 | 9.716943e-49 | -8.615850e-47 |
| Msa0014920 | Msa1302150 | 0.816556 | 5.203844e-52 | -8.615850e-47 |
| Msa0014920 | Msa1309360 | 0.817104 | 3.920142e-52 | -8.615850e-47 |
| Msa0014920 | Msa1310110 | 0.816193 | 6.272910e-52 | -8.615850e-47 |
| Msa0014920 | Msa1323190 | 0.811619 | 6.394932e-51 | -8.615850e-47 |
| Msa0014920 | Msa1323670 | 0.807284 | 5.448507e-50 | -8.615850e-47 |
| Msa0014920 | Msa1329990 | 0.808500 | 3.003413e-50 | -8.615850e-47 |
| Msa0014920 | Msa1354040 | 0.807672 | 4.508350e-50 | -8.615850e-47 |
| Msa0014920 | Msa1358550 | 0.822185 | 2.711936e-53 | -8.615850e-47 |
| Msa0014920 | Msa1364470 | -0.808775 | 2.623992e-50 | -8.615850e-47 |
| Msa0014920 | Msa1373950 | 0.810531 | 1.100597e-50 | -8.615850e-47 |
| Msa0014920 | Msa1375940 | 0.803252 | 3.808818e-49 | -8.615850e-47 |
| Msa0014920 | Msa1385620 | 0.808181 | 3.513714e-50 | -8.615850e-47 |
| Msa0014920 | Msa1385900 | 0.843220 | 1.601970e-58 | -8.615850e-47 |
| Msa0014920 | Msa1390310 | 0.802305 | 5.976172e-49 | -8.615850e-47 |
| Msa0014920 | Msa1395230 | -0.803579 | 3.258292e-49 | -8.615850e-47 |
| Msa0014920 | Msa1398480 | 0.846547 | 2.027594e-59 | -8.615850e-47 |
| Msa0014920 | Msa1418200 | 0.806267 | 8.937093e-50 | -8.615850e-47 |
| Msa0014920 | Msa1429250 | 0.804643 | 1.957914e-49 | -8.615850e-47 |
| Msa0014920 | Msa1429360 | -0.823803 | 1.138023e-53 | -8.615850e-47 |
| Msa0014920 | Msa1431000 | 0.810350 | 1.204389e-50 | -8.615850e-47 |
| Msa0014920 | Msa1447230 | 0.812626 | 3.856935e-51 | -8.615850e-47 |
| Msa0014920 | Msa1464560 | 0.810522 | 1.105288e-50 | -8.615850e-47 |
| Msa0014920 | Msa1464730 | 0.809348 | 1.978625e-50 | -8.615850e-47 |
| Msa0014920 | Msa1465900 | 0.803759 | 2.991124e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014920 | MtrunA17_Chr1g0165441 | 91.022 | 401 | 12 | 3 | 1 | 380 | 1 | 398 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014920 | AT3G28760.1 | 62.078 | 385 | 111 | 3 | 18 | 379 | 49 | 421 | 6.90e-169 | 478 |
| Msa0014920 | AT3G28760.2 | 62.078 | 385 | 111 | 3 | 18 | 379 | 71 | 443 | 1.45e-168 | 478 |
Find 75 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTAGTGAGAAGGATATTT+TGG | 0.180793 | 1_1:+23914665 | Msa0014920:CDS |
| GGAAAGGAGCAGCTTATATT+TGG | 0.262534 | 1_1:+23918821 | Msa0014920:three_prime_UTR |
| TTTGGATGCACAAAATAAAA+AGG | 0.273689 | 1_1:+23914683 | Msa0014920:CDS |
| GGCAAAAGATGCTTCACTTT+AGG | 0.292968 | 1_1:+23918945 | Msa0014920:three_prime_UTR |
| AATCAAAGAAAGTGTGGATA+TGG | 0.301157 | 1_1:+23913436 | Msa0014920:CDS |
| CACGCCTACATTGCTGTTCC+AGG | 0.323371 | 1_1:+23916673 | Msa0014920:CDS |
| GCAAGATGAGGAAGATTAGA+TGG | 0.324251 | 1_1:-23913519 | None:intergenic |
| AAGACTTGGTCTGATATCTT+TGG | 0.346536 | 1_1:-23918847 | None:intergenic |
| CATTGCTTTCTTCTGTTCTT+CGG | 0.350670 | 1_1:-23915949 | None:intergenic |
| AGTGATTGTGGTTGATCAAC+AGG | 0.351036 | 1_1:+23916738 | Msa0014920:CDS |
| TTCTTCTTCTTGGACACCAT+TGG | 0.354356 | 1_1:+23913395 | Msa0014920:CDS |
| ATGTCTTTACTGTCGCAAAT+TGG | 0.354779 | 1_1:+23913288 | Msa0014920:CDS |
| TTCCTCATCTTGCCAATGAT+TGG | 0.355275 | 1_1:+23913529 | Msa0014920:CDS |
| AGATGGCAAATACAGTCTTT+TGG | 0.378386 | 1_1:-23915644 | None:intergenic |
| TGAGCCTATTCTTGAGCTTA+AGG | 0.383726 | 1_1:+23915844 | Msa0014920:CDS |
| ATGTATGTAAACAGATATAA+TGG | 0.383937 | 1_1:+23918985 | Msa0014920:three_prime_UTR |
| AAATTCTTGAATCTCTATTC+CGG | 0.391166 | 1_1:-23918665 | None:intergenic |
| CAAATTCAAGTTGCTGGAAT+GGG | 0.397178 | 1_1:+23916001 | Msa0014920:CDS |
| GCACTTGAACATGGCTTAGA+TGG | 0.408508 | 1_1:+23915797 | Msa0014920:CDS |
| TGGACACCATTGGAGGATAC+TGG | 0.409798 | 1_1:+23913405 | Msa0014920:CDS |
| AATTTGTGTCACAGTGGCTT+TGG | 0.410779 | 1_1:-23915984 | None:intergenic |
| GTGACACAAATTCAAGTTGC+TGG | 0.412213 | 1_1:+23915995 | Msa0014920:CDS |
| CGGCAAAGAATTGCAATTGT+TGG | 0.452724 | 1_1:+23916763 | Msa0014920:CDS |
| ACAAATTGAATTACCTTGTA+CGG | 0.452777 | 1_1:-23918495 | None:intergenic |
| TCTTGTTCATTCAGAATGCT+TGG | 0.454670 | 1_1:+23916179 | Msa0014920:CDS |
| AAACGTGTGTTGGAAGTAGA+AGG | 0.460018 | 1_1:-23913333 | None:intergenic |
| CTCAAGAAATGTCTGAGCTT+CGG | 0.461769 | 1_1:-23915679 | None:intergenic |
| CCAGTGACATCACTAAAAGT+TGG | 0.464939 | 1_1:+23918601 | Msa0014920:CDS |
| TACCTGTCAGAATTAAAATC+AGG | 0.467479 | 1_1:+23916709 | Msa0014920:CDS |
| TAAAATACATGACCAATCAT+TGG | 0.473391 | 1_1:-23913541 | None:intergenic |
| ACAGCAATGTAGGCGTGAAC+TGG | 0.479131 | 1_1:-23916667 | None:intergenic |
| TTCTTCTTGGACACCATTGG+AGG | 0.485849 | 1_1:+23913398 | Msa0014920:CDS |
| GCTTTAGTTTGTCCCGTACA+AGG | 0.485966 | 1_1:+23918482 | Msa0014920:CDS |
| ACAAATTCAAGTTGCTGGAA+TGG | 0.489970 | 1_1:+23916000 | Msa0014920:CDS |
| TTGTTACCAGTATCCTCCAA+TGG | 0.499727 | 1_1:-23913411 | None:intergenic |
| CAAATTGAATTACCTTGTAC+GGG | 0.507264 | 1_1:-23918494 | None:intergenic |
| TTTGAGGCGCAAACGTGTGT+TGG | 0.510108 | 1_1:-23913343 | None:intergenic |
| AGGTAGGATGTTCTACCGCC+TGG | 0.514003 | 1_1:-23916691 | None:intergenic |
| TAGGTTGGATCCTTTGCTAG+AGG | 0.519842 | 1_1:+23916150 | Msa0014920:intron |
| CTAAGTCGTTCTAGTTCCTC+CGG | 0.524065 | 1_1:-23914732 | None:intergenic |
| CTCTGCAGTCTTATGAGACC+TGG | 0.525874 | 1_1:+23916043 | Msa0014920:CDS |
| GTAAACAGATATAATGGAGT+TGG | 0.537288 | 1_1:+23918991 | Msa0014920:three_prime_UTR |
| CTTACCGCATTCACCCGAAA+AGG | 0.538390 | 1_1:-23916225 | None:intergenic |
| GGAATTGTGTAAAGTCCAGT+TGG | 0.544052 | 1_1:+23918924 | Msa0014920:three_prime_UTR |
| CAAGATGAGGAAGATTAGAT+GGG | 0.546175 | 1_1:-23913518 | None:intergenic |
| ATCAGGAAAAGAAGTGATTG+TGG | 0.556374 | 1_1:+23916726 | Msa0014920:CDS |
| CAAGGAGGGGCTCGACATAC+CGG | 0.557488 | 1_1:+23918646 | Msa0014920:CDS |
| AAGAAATAATCCTCTAGCAA+AGG | 0.559960 | 1_1:-23916160 | None:intergenic |
| TTGTAGAAGAACAAGGTTTG+AGG | 0.561848 | 1_1:-23913359 | None:intergenic |
| ATCACCTTAAGCTCAAGAAT+AGG | 0.564561 | 1_1:-23915848 | None:intergenic |
| CTGCAGCTGTTGAAAGAGGA+TGG | 0.567310 | 1_1:+23913481 | Msa0014920:CDS |
| TTCGGATGCATTATCAGAGA+TGG | 0.570257 | 1_1:-23915661 | None:intergenic |
| AAATTCAAGTTGCTGGAATG+GGG | 0.571305 | 1_1:+23916002 | Msa0014920:CDS |
| GAAGGCATTGTAGAAGAACA+AGG | 0.582626 | 1_1:-23913366 | None:intergenic |
| TTCTATTGAGAATACAAGGA+GGG | 0.587874 | 1_1:+23918632 | Msa0014920:CDS |
| CGAAGCTCAGACATTTCTTG+AGG | 0.591185 | 1_1:+23915680 | Msa0014920:CDS |
| ATGAAAATAATGCAAAGACT+TGG | 0.605754 | 1_1:-23918861 | None:intergenic |
| GACCAATCATTGGCAAGATG+AGG | 0.606847 | 1_1:-23913531 | None:intergenic |
| GAAGTTCTATTGAGAATACA+AGG | 0.609646 | 1_1:+23918628 | Msa0014920:CDS |
| ACCGCCTGGAACAGCAATGT+AGG | 0.611914 | 1_1:-23916677 | None:intergenic |
| TCTATTGAGAATACAAGGAG+GGG | 0.613333 | 1_1:+23918633 | Msa0014920:CDS |
| ATGACTGCAGCTGTTGAAAG+AGG | 0.614177 | 1_1:+23913477 | Msa0014920:CDS |
| AATTCAAGTTGCTGGAATGG+GGG | 0.626295 | 1_1:+23916003 | Msa0014920:CDS |
| GTGTTGGAAGTAGAAGGTGG+TGG | 0.630075 | 1_1:-23913327 | None:intergenic |
| AAGAGGACAGATGACTGCAA+TGG | 0.637867 | 1_1:-23914640 | None:intergenic |
| TTGTGGTTGATCAACAGGGT+CGG | 0.642420 | 1_1:+23916743 | Msa0014920:CDS |
| AGTCTTATGAGACCTGGTGA+AGG | 0.644139 | 1_1:+23916049 | Msa0014920:CDS |
| CATACGAGAAGTCCTTCACC+AGG | 0.653315 | 1_1:-23916061 | None:intergenic |
| GATATGGACAAAGAACAAGC+AGG | 0.656378 | 1_1:+23913452 | Msa0014920:CDS |
| GTGATTGTGGTTGATCAACA+GGG | 0.670264 | 1_1:+23916739 | Msa0014920:CDS |
| GCCTACATTGCTGTTCCAGG+CGG | 0.679259 | 1_1:+23916676 | Msa0014920:CDS |
| AACTTGAATTTGTGTCACAG+TGG | 0.683036 | 1_1:-23915990 | None:intergenic |
| GTTCTATTGAGAATACAAGG+AGG | 0.709797 | 1_1:+23918631 | Msa0014920:CDS |
| ACTAGAACGACTTAGACCTG+AGG | 0.735230 | 1_1:+23914740 | Msa0014920:CDS |
| CGTGTGTTGGAAGTAGAAGG+TGG | 0.751214 | 1_1:-23913330 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAGTCTTTAAAATTTT+AGG | + | chr1_1:23914156-23914175 | Msa0014920:intron | 10.0% |
| !!! | AATTATGATTTTATGATATT+TGG | + | chr1_1:23914593-23914612 | Msa0014920:intron | 10.0% |
| !!! | TTAGTTTTTAAAAATGTTAA+TGG | + | chr1_1:23917634-23917653 | Msa0014920:intron | 10.0% |
| !! | TGTTAAAATAGTTAAAAATA+TGG | - | chr1_1:23917961-23917980 | None:intergenic | 10.0% |
| !! | ATTAAAATGAAAAACAAAAG+GGG | - | chr1_1:23914324-23914343 | None:intergenic | 15.0% |
| !! | GATTAAAATGAAAAACAAAA+GGG | - | chr1_1:23914325-23914344 | None:intergenic | 15.0% |
| !! | AGATTAAAATGAAAAACAAA+AGG | - | chr1_1:23914326-23914345 | None:intergenic | 15.0% |
| !!! | TTTTATGATATTTGGAATTT+TGG | + | chr1_1:23914601-23914620 | Msa0014920:intron | 15.0% |
| !! | TACATTATTGAAATTGAAAA+TGG | - | chr1_1:23915544-23915563 | None:intergenic | 15.0% |
| !!! | AAATATTTTCCAATAACTAA+TGG | - | chr1_1:23916845-23916864 | None:intergenic | 15.0% |
| !!! | CAAAAAAACAAATTCTAAAA+AGG | - | chr1_1:23916896-23916915 | None:intergenic | 15.0% |
| !!! | CTTTTGCTTATATTTTATAA+TGG | - | chr1_1:23917300-23917319 | None:intergenic | 15.0% |
| !! | AATTATCTGAATTTGAAAAT+AGG | + | chr1_1:23918093-23918112 | Msa0014920:intron | 15.0% |
| !!! | GATTTGAAATATAATGGAAA+GGG | - | chr1_1:23913585-23913604 | None:intergenic | 20.0% |
| !!! | CAATTGGATTTGAAATATAA+TGG | - | chr1_1:23913591-23913610 | None:intergenic | 20.0% |
| !! | TAATGTGATACTAAAACAAT+TGG | - | chr1_1:23913607-23913626 | None:intergenic | 20.0% |
| !! | AATGGAAACAAATAACAAAA+GGG | - | chr1_1:23913630-23913649 | None:intergenic | 20.0% |
| !! | AAATGGAAACAAATAACAAA+AGG | - | chr1_1:23913631-23913650 | None:intergenic | 20.0% |
| !! | GATGAAATTTAAACACAAAA+TGG | - | chr1_1:23913648-23913667 | None:intergenic | 20.0% |
| !! | AAATTAACCAAATACTTAAG+TGG | + | chr1_1:23914202-23914221 | Msa0014920:intron | 20.0% |
| !!! | TTAATTTGTTGATACATGAT+TGG | + | chr1_1:23914422-23914441 | Msa0014920:intron | 20.0% |
| !!! | ACTTTTATTTTAATGAACTC+CGG | - | chr1_1:23914522-23914541 | None:intergenic | 20.0% |
| !! | TTGTAGTTAATTTACTTGAT+TGG | + | chr1_1:23914781-23914800 | Msa0014920:intron | 20.0% |
| !! | AAACAAGGAAAACTAATATA+AGG | - | chr1_1:23915042-23915061 | None:intergenic | 20.0% |
| !! | TGAGGTATATAAATATTAGT+AGG | + | chr1_1:23915698-23915717 | Msa0014920:intron | 20.0% |
| !! | GAGGTATATAAATATTAGTA+GGG | + | chr1_1:23915699-23915718 | Msa0014920:intron | 20.0% |
| !! | AGGTATATAAATATTAGTAG+GGG | + | chr1_1:23915700-23915719 | Msa0014920:intron | 20.0% |
| !! | ATTATAAATAATGAGACAGA+GGG | - | chr1_1:23917101-23917120 | None:intergenic | 20.0% |
| !! | TATTATAAATAATGAGACAG+AGG | - | chr1_1:23917102-23917121 | None:intergenic | 20.0% |
| !! | TCTTGAGATACAATTAATAA+GGG | - | chr1_1:23917167-23917186 | None:intergenic | 20.0% |
| !! | ATCTTGAGATACAATTAATA+AGG | - | chr1_1:23917168-23917187 | None:intergenic | 20.0% |
| !! | AAACGATGCAAAAAATTATA+CGG | - | chr1_1:23917766-23917785 | None:intergenic | 20.0% |
| !! | AAATAATGAATTCAAAACCA+TGG | + | chr1_1:23918039-23918058 | Msa0014920:intron | 20.0% |
| !! | AATAATGAATTCAAAACCAT+GGG | + | chr1_1:23918040-23918059 | Msa0014920:intron | 20.0% |
| !!! | ATTTTTCTTTTCCATTGATT+TGG | - | chr1_1:23918076-23918095 | None:intergenic | 20.0% |
| !! | ATGTATGTAAACAGATATAA+TGG | + | chr1_1:23918985-23919004 | Msa0014920:three_prime_UTR | 20.0% |
| ! | ACAAAAAATCAAAGAAAGTG+TGG | + | chr1_1:23913430-23913449 | Msa0014920:CDS | 25.0% |
| ! | TAAAATACATGACCAATCAT+TGG | - | chr1_1:23913544-23913563 | None:intergenic | 25.0% |
| !! | GGATTTGAAATATAATGGAA+AGG | - | chr1_1:23913586-23913605 | None:intergenic | 25.0% |
| !!! | AGTCTTTAAAATTTTAGGAG+AGG | + | chr1_1:23914161-23914180 | Msa0014920:intron | 25.0% |
| ! | ATTGAAGTCTTCAATTACAT+TGG | + | chr1_1:23914233-23914252 | Msa0014920:intron | 25.0% |
| !! | CATTCATAAGGAAGATATTT+TGG | + | chr1_1:23914380-23914399 | Msa0014920:intron | 25.0% |
| !! | TGGAAATGTTTTTCACATTT+AGG | + | chr1_1:23914442-23914461 | Msa0014920:intron | 25.0% |
| !! | AAATAGAGTTTGAGTTATGT+TGG | + | chr1_1:23914481-23914500 | Msa0014920:intron | 25.0% |
| ! | GGAGTTCATTAAAATAAAAG+TGG | + | chr1_1:23914521-23914540 | Msa0014920:intron | 25.0% |
| ! | TTTGGATGCACAAAATAAAA+AGG | + | chr1_1:23914683-23914702 | Msa0014920:CDS | 25.0% |
| !!! | ATATTGATTCAGCAAAAACA+AGG | - | chr1_1:23915057-23915076 | None:intergenic | 25.0% |
| !!! | TTTGAGCAATTTTCAAGTAT+CGG | + | chr1_1:23915161-23915180 | Msa0014920:intron | 25.0% |
| !! | TTATTACTACCAATTTTCTG+AGG | + | chr1_1:23915433-23915452 | Msa0014920:intron | 25.0% |
| !! | TATTACTACCAATTTTCTGA+GGG | + | chr1_1:23915434-23915453 | Msa0014920:intron | 25.0% |
| ! | AGATTTAAACTGAAAGTAAG+AGG | - | chr1_1:23915913-23915932 | None:intergenic | 25.0% |
| ! | ACTTTCAGTTTAAATCTTTC+AGG | + | chr1_1:23915916-23915935 | Msa0014920:intron | 25.0% |
| !!! | AAGTTTTTGACTGTTAAGAA+TGG | - | chr1_1:23916126-23916145 | None:intergenic | 25.0% |
| ! | AACAGTCAAAAACTTTCTTT+AGG | + | chr1_1:23916131-23916150 | Msa0014920:intron | 25.0% |
| ! | AAGATGAATGTTTGATGTTA+TGG | + | chr1_1:23916582-23916601 | Msa0014920:intron | 25.0% |
| ! | TTTGTGTATCCATTAGTTAT+TGG | + | chr1_1:23916833-23916852 | Msa0014920:intron | 25.0% |
| ! | GAATTTGAACAAATCACTAT+TGG | + | chr1_1:23917048-23917067 | Msa0014920:intron | 25.0% |
| ! | AAACAGTAAGATGAATAGTT+AGG | - | chr1_1:23917192-23917211 | None:intergenic | 25.0% |
| !!! | TTACTGTTTTTGTCAAATAG+CGG | + | chr1_1:23917203-23917222 | Msa0014920:intron | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | + | chr1_1:23917324-23917343 | Msa0014920:intron | 25.0% |
| !! | GATGTACTTGGTTTAAAATT+TGG | - | chr1_1:23917351-23917370 | None:intergenic | 25.0% |
| ! | TCAAACAAAATTGATGTACT+TGG | - | chr1_1:23917363-23917382 | None:intergenic | 25.0% |
| !! | CTTTTGCTTATGTTTTGTAA+TGG | + | chr1_1:23917387-23917406 | Msa0014920:intron | 25.0% |
| !! | AATCATCTTTTCCACTAATT+AGG | - | chr1_1:23917731-23917750 | None:intergenic | 25.0% |
| ! | TAATTAGTGGAAAAGATGAT+TGG | + | chr1_1:23917730-23917749 | Msa0014920:intron | 25.0% |
| ! | AGAGTGAAAATAAGGAAATA+TGG | - | chr1_1:23917821-23917840 | None:intergenic | 25.0% |
| ! | TGTAAAAAACACGGAAATAT+GGG | - | chr1_1:23917906-23917925 | None:intergenic | 25.0% |
| ! | GATTTATGGTGTAAAAAACA+CGG | - | chr1_1:23917915-23917934 | None:intergenic | 25.0% |
| ! | AACAAGGAAATATGGATTTA+TGG | - | chr1_1:23917929-23917948 | None:intergenic | 25.0% |
| !!! | ATGAAATTTTTTAGTTGCTG+TGG | - | chr1_1:23918005-23918024 | None:intergenic | 25.0% |
| ! | ATAATGAATTCAAAACCATG+GGG | + | chr1_1:23918041-23918060 | Msa0014920:intron | 25.0% |
| ! | TTTAACTCTGAATTTCATCA+GGG | - | chr1_1:23918152-23918171 | None:intergenic | 25.0% |
| ! | ATTTAACTCTGAATTTCATC+AGG | - | chr1_1:23918153-23918172 | None:intergenic | 25.0% |
| ! | ACAAATTGAATTACCTTGTA+CGG | - | chr1_1:23918498-23918517 | None:intergenic | 25.0% |
| ! | AAATTCTTGAATCTCTATTC+CGG | - | chr1_1:23918668-23918687 | None:intergenic | 25.0% |
| ! | ATGAAAATAATGCAAAGACT+TGG | - | chr1_1:23918864-23918883 | None:intergenic | 25.0% |
| !! | ATTTAGCATCTCTTTCTTTT+AGG | + | chr1_1:23918903-23918922 | Msa0014920:three_prime_UTR | 25.0% |
| !!! | CATCTTATTTTGTTTGTCAG+CGG | - | chr1_1:23913271-23913290 | None:intergenic | 30.0% |
| ! | AATCAAAGAAAGTGTGGATA+TGG | + | chr1_1:23913436-23913455 | Msa0014920:CDS | 30.0% |
| AACACTAAGTAGAAACACAA+TGG | - | chr1_1:23913670-23913689 | None:intergenic | 30.0% | |
| ! | ATTGTGTTTCTACTTAGTGT+TGG | + | chr1_1:23913669-23913688 | Msa0014920:intron | 30.0% |
| ATGTCATATCTATAGGCAAT+GGG | - | chr1_1:23913809-23913828 | None:intergenic | 30.0% | |
| ACTACACATGTCATATCTAT+AGG | - | chr1_1:23913816-23913835 | None:intergenic | 30.0% | |
| TGAAAATTCAGCTTTCATTG+TGG | + | chr1_1:23913998-23914017 | Msa0014920:intron | 30.0% | |
| TTTCTATGACAACTATCCAA+GGG | - | chr1_1:23914106-23914125 | None:intergenic | 30.0% | |
| ATTTCTATGACAACTATCCA+AGG | - | chr1_1:23914107-23914126 | None:intergenic | 30.0% | |
| !!! | CTTTAAAATTTTAGGAGAGG+AGG | + | chr1_1:23914164-23914183 | Msa0014920:intron | 30.0% |
| TCACAAACCACTTAAGTATT+TGG | - | chr1_1:23914212-23914231 | None:intergenic | 30.0% | |
| ACAAATTTGATCCAATGTCT+TGG | + | chr1_1:23914352-23914371 | Msa0014920:intron | 30.0% | |
| !! | TTGGTGATTTTGAATTTTGC+CGG | + | chr1_1:23914500-23914519 | Msa0014920:intron | 30.0% |
| AGTTAATTTACTTGATTGGC+AGG | + | chr1_1:23914785-23914804 | Msa0014920:intron | 30.0% | |
| TCTAGACACAGAATAATCAA+CGG | - | chr1_1:23915260-23915279 | None:intergenic | 30.0% | |
| ATAAACAACCACATTTCTTC+AGG | - | chr1_1:23915484-23915503 | None:intergenic | 30.0% | |
| ATGTGGTTGTTTATATTTGC+TGG | + | chr1_1:23915490-23915509 | Msa0014920:intron | 30.0% | |
| ! | TTGCAACCTTTGAATTTTGT+AGG | + | chr1_1:23915775-23915794 | Msa0014920:intron | 30.0% |
| AATACTCAAGAAGCTTCAAA+TGG | - | chr1_1:23915881-23915900 | None:intergenic | 30.0% | |
| ! | CTCGTATGTATTCATTTTGA+TGG | + | chr1_1:23916076-23916095 | Msa0014920:intron | 30.0% |
| GTCAAAAACTTTCTTTAGGT+TGG | + | chr1_1:23916135-23916154 | Msa0014920:intron | 30.0% | |
| AAGAAATAATCCTCTAGCAA+AGG | - | chr1_1:23916163-23916182 | None:intergenic | 30.0% | |
| !! | GCTATTTTCATAAGCTATCT+TGG | - | chr1_1:23916407-23916426 | None:intergenic | 30.0% |
| !! | TTAACCAAACTAGTCTTTCA+TGG | + | chr1_1:23916521-23916540 | Msa0014920:intron | 30.0% |
| ATTCATCATAGAGTTTCTCT+TGG | - | chr1_1:23916616-23916635 | None:intergenic | 30.0% | |
| ATTACAAGTAACTGGTGAAA+AGG | - | chr1_1:23916639-23916658 | None:intergenic | 30.0% | |
| ACCAGTTACTTGTAATAACA+GGG | + | chr1_1:23916643-23916662 | Msa0014920:intron | 30.0% | |
| !!! | TGATTTTAATTCTGACAGGT+AGG | - | chr1_1:23916710-23916729 | None:intergenic | 30.0% |
| TACCTGTCAGAATTAAAATC+AGG | + | chr1_1:23916709-23916728 | Msa0014920:CDS | 30.0% | |
| !!! | TTCCTGATTTTAATTCTGAC+AGG | - | chr1_1:23916714-23916733 | None:intergenic | 30.0% |
| GTCTACTTTCTATCTTTACA+CGG | - | chr1_1:23916789-23916808 | None:intergenic | 30.0% | |
| AAAGGATACTTAGTATGAGA+CGG | - | chr1_1:23916878-23916897 | None:intergenic | 30.0% | |
| ! | TGTTTCTTATGTGTTCTAGA+AGG | - | chr1_1:23916931-23916950 | None:intergenic | 30.0% |
| !! | CAATGGTGAGTTGATTAATT+AGG | - | chr1_1:23916999-23917018 | None:intergenic | 30.0% |
| ! | TTGCTTATGTTTTGTAATGG+AGG | + | chr1_1:23917390-23917409 | Msa0014920:intron | 30.0% |
| !! | TGCTTATGTTTTGTAATGGA+GGG | + | chr1_1:23917391-23917410 | Msa0014920:intron | 30.0% |
| TAACAAAGTAGTTAGTGACA+AGG | - | chr1_1:23917495-23917514 | None:intergenic | 30.0% | |
| TAAAAGACAGGTAATATGAG+AGG | + | chr1_1:23917598-23917617 | Msa0014920:intron | 30.0% | |
| AAAAGACAGGTAATATGAGA+GGG | + | chr1_1:23917599-23917618 | Msa0014920:intron | 30.0% | |
| !! | TTTTGAAGGTAGGAACATAA+GGG | - | chr1_1:23917689-23917708 | None:intergenic | 30.0% |
| !! | TTTTTGAAGGTAGGAACATA+AGG | - | chr1_1:23917690-23917709 | None:intergenic | 30.0% |
| !!! | TAAGGAAGTTTGGTTTTTGA+AGG | - | chr1_1:23917703-23917722 | None:intergenic | 30.0% |
| ATGATGCTAGAGTGAAAATA+AGG | - | chr1_1:23917829-23917848 | None:intergenic | 30.0% | |
| TATGGGTGCAGTTAAAAATA+TGG | - | chr1_1:23917889-23917908 | None:intergenic | 30.0% | |
| GTGTAAAAAACACGGAAATA+TGG | - | chr1_1:23917907-23917926 | None:intergenic | 30.0% | |
| TAATGAATTCAAAACCATGG+GGG | + | chr1_1:23918042-23918061 | Msa0014920:intron | 30.0% | |
| TTGTAAGTGTTATACATGGT+GGG | - | chr1_1:23918176-23918195 | None:intergenic | 30.0% | |
| TTTGTAAGTGTTATACATGG+TGG | - | chr1_1:23918177-23918196 | None:intergenic | 30.0% | |
| GAGTTTGTAAGTGTTATACA+TGG | - | chr1_1:23918180-23918199 | None:intergenic | 30.0% | |
| TGAAGACAACTAGAAATAGA+TGG | - | chr1_1:23918296-23918315 | None:intergenic | 30.0% | |
| ! | TCAGCAATATTTTCATAGTG+TGG | + | chr1_1:23918313-23918332 | Msa0014920:intron | 30.0% |
| CAAATTGAATTACCTTGTAC+GGG | - | chr1_1:23918497-23918516 | None:intergenic | 30.0% | |
| AACGGTTTATTTCCTGAATA+GGG | - | chr1_1:23918568-23918587 | None:intergenic | 30.0% | |
| TAACGGTTTATTTCCTGAAT+AGG | - | chr1_1:23918569-23918588 | None:intergenic | 30.0% | |
| !!! | ACTGGAAAAGCTGTTTTTAA+CGG | - | chr1_1:23918586-23918605 | None:intergenic | 30.0% |
| GAAGTTCTATTGAGAATACA+AGG | + | chr1_1:23918628-23918647 | Msa0014920:CDS | 30.0% | |
| TTCTATTGAGAATACAAGGA+GGG | + | chr1_1:23918632-23918651 | Msa0014920:CDS | 30.0% | |
| !!! | AGAGTGGTTCATGATTTTTT+TGG | + | chr1_1:23918793-23918812 | Msa0014920:intron | 30.0% |
| !!! | TTCATGATTTTTTTGGCTAG+AGG | + | chr1_1:23918800-23918819 | Msa0014920:three_prime_UTR | 30.0% |
| ! | GTAAACAGATATAATGGAGT+TGG | + | chr1_1:23918991-23919010 | Msa0014920:three_prime_UTR | 30.0% |
| ATGTCTTTACTGTCGCAAAT+TGG | + | chr1_1:23913288-23913307 | Msa0014920:CDS | 35.0% | |
| TTGTAGAAGAACAAGGTTTG+AGG | - | chr1_1:23913362-23913381 | None:intergenic | 35.0% | |
| CAAGAAGAAGAAGAAGAAGA+AGG | - | chr1_1:23913387-23913406 | None:intergenic | 35.0% | |
| CTTCTTCTTCTTCTTCTTCT+TGG | + | chr1_1:23913385-23913404 | Msa0014920:CDS | 35.0% | |
| CAAGATGAGGAAGATTAGAT+GGG | - | chr1_1:23913521-23913540 | None:intergenic | 35.0% | |
| TGGAAATTCTGCTTTCATTG+CGG | + | chr1_1:23913689-23913708 | Msa0014920:intron | 35.0% | |
| ACTCAAATTTCGCAATTAGG+AGG | - | chr1_1:23913726-23913745 | None:intergenic | 35.0% | |
| GCAACTCAAATTTCGCAATT+AGG | - | chr1_1:23913729-23913748 | None:intergenic | 35.0% | |
| CATGTCATATCTATAGGCAA+TGG | - | chr1_1:23913810-23913829 | None:intergenic | 35.0% | |
| !! | TGTGTAGTGTTTCTAAAGCT+TGG | + | chr1_1:23913828-23913847 | Msa0014920:intron | 35.0% |
| !! | GTGTAGTGTTTCTAAAGCTT+GGG | + | chr1_1:23913829-23913848 | Msa0014920:intron | 35.0% |
| CTAACTCAACCATACAAAAC+CGG | - | chr1_1:23913873-23913892 | None:intergenic | 35.0% | |
| ! | TCTAAAATGATATCAGAGCC+TGG | + | chr1_1:23913906-23913925 | Msa0014920:intron | 35.0% |
| TTCTATGACAACTATCCAAG+GGG | - | chr1_1:23914105-23914124 | None:intergenic | 35.0% | |
| TGAATGTCATTCCAAGACAT+TGG | - | chr1_1:23914366-23914385 | None:intergenic | 35.0% | |
| GTCTTGGAATGACATTCATA+AGG | + | chr1_1:23914368-23914387 | Msa0014920:intron | 35.0% | |
| TTTGGCGATAGTAAAATGCT+TGG | + | chr1_1:23914398-23914417 | Msa0014920:intron | 35.0% | |
| !! | ATTTGGAATTTTGGCCATGA+CGG | + | chr1_1:23914610-23914629 | Msa0014920:intron | 35.0% |
| ! | TGCTAGTGAGAAGGATATTT+TGG | + | chr1_1:23914665-23914684 | Msa0014920:CDS | 35.0% |
| TGTCGAAACGTCAAAAATTG+TGG | - | chr1_1:23914712-23914731 | None:intergenic | 35.0% | |
| ! | AATTTTTGACGTTTCGACAC+CGG | + | chr1_1:23914713-23914732 | Msa0014920:CDS | 35.0% |
| AGTGTCTCATATAGTCCTTA+CGG | + | chr1_1:23914859-23914878 | Msa0014920:intron | 35.0% | |
| TTCAAACGACTTTCAAGCAT+TGG | - | chr1_1:23914889-23914908 | None:intergenic | 35.0% | |
| !! | AAGTTATTTTCTCACCCGTA+AGG | + | chr1_1:23915082-23915101 | Msa0014920:intron | 35.0% |
| CATTAGCTAGTCCTTAAAGA+TGG | - | chr1_1:23915224-23915243 | None:intergenic | 35.0% | |
| !! | CATCTTTAAGGACTAGCTAA+TGG | + | chr1_1:23915222-23915241 | Msa0014920:intron | 35.0% |
| ACTTTCTACCTGAAGAAATG+TGG | + | chr1_1:23915473-23915492 | Msa0014920:intron | 35.0% | |
| ! | GCAGCAATTATATTTTCTGC+AGG | - | chr1_1:23915612-23915631 | None:intergenic | 35.0% |
| !! | ATACAGTCTTTTGGCTGTTT+TGG | - | chr1_1:23915638-23915657 | None:intergenic | 35.0% |
| ! | AGATGGCAAATACAGTCTTT+TGG | - | chr1_1:23915647-23915666 | None:intergenic | 35.0% |
| !! | AATATTAGTAGGGGTGTTAC+AGG | + | chr1_1:23915709-23915728 | Msa0014920:intron | 35.0% |
| ATTCAAAGGTTGCAACTGTA+AGG | - | chr1_1:23915770-23915789 | None:intergenic | 35.0% | |
| CAAGTGCCTACAAAATTCAA+AGG | - | chr1_1:23915784-23915803 | None:intergenic | 35.0% | |
| ! | ATTTTGTAGGCACTTGAACA+TGG | + | chr1_1:23915788-23915807 | Msa0014920:intron | 35.0% |
| ATCACCTTAAGCTCAAGAAT+AGG | - | chr1_1:23915851-23915870 | None:intergenic | 35.0% | |
| ! | TTGAAGCTTCTTGAGTATTG+AGG | + | chr1_1:23915882-23915901 | Msa0014920:intron | 35.0% |
| CATTGCTTTCTTCTGTTCTT+CGG | - | chr1_1:23915952-23915971 | None:intergenic | 35.0% | |
| AACTTGAATTTGTGTCACAG+TGG | - | chr1_1:23915993-23916012 | None:intergenic | 35.0% | |
| !! | ACAAATTCAAGTTGCTGGAA+TGG | + | chr1_1:23916000-23916019 | Msa0014920:CDS | 35.0% |
| !! | CAAATTCAAGTTGCTGGAAT+GGG | + | chr1_1:23916001-23916020 | Msa0014920:CDS | 35.0% |
| !! | AAATTCAAGTTGCTGGAATG+GGG | + | chr1_1:23916002-23916021 | Msa0014920:CDS | 35.0% |
| TCTTGTTCATTCAGAATGCT+TGG | + | chr1_1:23916179-23916198 | Msa0014920:CDS | 35.0% | |
| AAGCTATCTTGGAGACTTTA+TGG | - | chr1_1:23916396-23916415 | None:intergenic | 35.0% | |
| CATCAAACATTCATCTTCCA+AGG | - | chr1_1:23916579-23916598 | None:intergenic | 35.0% | |
| CACCAGTTACTTGTAATAAC+AGG | + | chr1_1:23916642-23916661 | Msa0014920:intron | 35.0% | |
| TCCCTGTTATTACAAGTAAC+TGG | - | chr1_1:23916647-23916666 | None:intergenic | 35.0% | |
| ATCAGGAAAAGAAGTGATTG+TGG | + | chr1_1:23916726-23916745 | Msa0014920:CDS | 35.0% | |
| !! | TGGTGAGTTGATTAATTAGG+TGG | - | chr1_1:23916996-23917015 | None:intergenic | 35.0% |
| GCACTGCTATTGAAAAACAA+TGG | - | chr1_1:23917016-23917035 | None:intergenic | 35.0% | |
| TGTACTAACGAGCAACAAAA+GGG | - | chr1_1:23917258-23917277 | None:intergenic | 35.0% | |
| TTGTACTAACGAGCAACAAA+AGG | - | chr1_1:23917259-23917278 | None:intergenic | 35.0% | |
| TCAATCGCAGAAAATAGTAG+CGG | - | chr1_1:23917470-23917489 | None:intergenic | 35.0% | |
| TGTGCAGAATCTTAAAAGAC+AGG | + | chr1_1:23917586-23917605 | Msa0014920:intron | 35.0% | |
| GGAACATAAGGGTTAGATAA+GGG | - | chr1_1:23917678-23917697 | None:intergenic | 35.0% | |
| AGGAACATAAGGGTTAGATA+AGG | - | chr1_1:23917679-23917698 | None:intergenic | 35.0% | |
| !!! | GAAGTTTGGTTTTTGAAGGT+AGG | - | chr1_1:23917699-23917718 | None:intergenic | 35.0% |
| TTAGGAGTGATAAGGAAGTT+TGG | - | chr1_1:23917713-23917732 | None:intergenic | 35.0% | |
| TCCTTATCACTCCTAATTAG+TGG | + | chr1_1:23917717-23917736 | Msa0014920:intron | 35.0% | |
| TCCACTAATTAGGAGTGATA+AGG | - | chr1_1:23917721-23917740 | None:intergenic | 35.0% | |
| GATGACTTACTCTATTGTGA+TGG | + | chr1_1:23917851-23917870 | Msa0014920:intron | 35.0% | |
| TCGCAGAAAACAAGGAAATA+TGG | - | chr1_1:23917937-23917956 | None:intergenic | 35.0% | |
| AATATGGATCGCAGAAAACA+AGG | - | chr1_1:23917945-23917964 | None:intergenic | 35.0% | |
| !! | TTTTAGTTGCTGTGGATTGA+TGG | - | chr1_1:23917997-23918016 | None:intergenic | 35.0% |
| AATGAATTCAAAACCATGGG+GGG | + | chr1_1:23918043-23918062 | Msa0014920:intron | 35.0% | |
| GTTCTATTGAGAATACAAGG+AGG | + | chr1_1:23918631-23918650 | Msa0014920:CDS | 35.0% | |
| TCTATTGAGAATACAAGGAG+GGG | + | chr1_1:23918633-23918652 | Msa0014920:CDS | 35.0% | |
| !!! | GATTTTTTTGGCTAGAGGAA+AGG | + | chr1_1:23918805-23918824 | Msa0014920:three_prime_UTR | 35.0% |
| ! | AAGACTTGGTCTGATATCTT+TGG | - | chr1_1:23918850-23918869 | None:intergenic | 35.0% |
| AAACGTGTGTTGGAAGTAGA+AGG | - | chr1_1:23913336-23913355 | None:intergenic | 40.0% | |
| !! | GAAGGCATTGTAGAAGAACA+AGG | - | chr1_1:23913369-23913388 | None:intergenic | 40.0% |
| TTCTTCTTCTTGGACACCAT+TGG | + | chr1_1:23913395-23913414 | Msa0014920:CDS | 40.0% | |
| TTGTTACCAGTATCCTCCAA+TGG | - | chr1_1:23913414-23913433 | None:intergenic | 40.0% | |
| GATATGGACAAAGAACAAGC+AGG | + | chr1_1:23913452-23913471 | Msa0014920:CDS | 40.0% | |
| GCAAGATGAGGAAGATTAGA+TGG | - | chr1_1:23913522-23913541 | None:intergenic | 40.0% | |
| TTCCTCATCTTGCCAATGAT+TGG | + | chr1_1:23913529-23913548 | Msa0014920:CDS | 40.0% | |
| ATTTCGCAATTAGGAGGCTA+GGG | - | chr1_1:23913720-23913739 | None:intergenic | 40.0% | |
| AATTTCGCAATTAGGAGGCT+AGG | - | chr1_1:23913721-23913740 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTATGGTTGAGTT+AGG | + | chr1_1:23913871-23913890 | Msa0014920:intron | 40.0% |
| AGCCTAAAGTATGGACAATG+CGG | - | chr1_1:23913951-23913970 | None:intergenic | 40.0% | |
| TGTCCATACTTTAGGCTCAT+TGG | + | chr1_1:23913954-23913973 | Msa0014920:intron | 40.0% | |
| GAACCAATGAGCCTAAAGTA+TGG | - | chr1_1:23913960-23913979 | None:intergenic | 40.0% | |
| AACCAGTGCAGAGATTATGA+AGG | - | chr1_1:23914060-23914079 | None:intergenic | 40.0% | |
| TTAGGAGAGGAGGAACAATT+TGG | + | chr1_1:23914174-23914193 | Msa0014920:intron | 40.0% | |
| ! | TCCTCTTTTTGCTAGTGAGA+AGG | + | chr1_1:23914656-23914675 | Msa0014920:CDS | 40.0% |
| TCCTTCTCACTAGCAAAAAG+AGG | - | chr1_1:23914660-23914679 | None:intergenic | 40.0% | |
| !! | TTCCTTGTTATTTGCCGAAC+CGG | - | chr1_1:23914993-23915012 | None:intergenic | 40.0% |
| CTTAAAGATGGCAAATGCTG+GGG | - | chr1_1:23915212-23915231 | None:intergenic | 40.0% | |
| CCTTAAAGATGGCAAATGCT+GGG | - | chr1_1:23915213-23915232 | None:intergenic | 40.0% | |
| TCCTTAAAGATGGCAAATGC+TGG | - | chr1_1:23915214-23915233 | None:intergenic | 40.0% | |
| CAGAATAATCAACGGATGAC+AGG | - | chr1_1:23915252-23915271 | None:intergenic | 40.0% | |
| CTCATCTTCCCTCAGAAAAT+TGG | - | chr1_1:23915445-23915464 | None:intergenic | 40.0% | |
| TTGTACACAATTGCTCACTC+AGG | + | chr1_1:23915581-23915600 | Msa0014920:intron | 40.0% | |
| TTCGGATGCATTATCAGAGA+TGG | - | chr1_1:23915664-23915683 | None:intergenic | 40.0% | |
| CTCAAGAAATGTCTGAGCTT+CGG | - | chr1_1:23915682-23915701 | None:intergenic | 40.0% | |
| TGAGCCTATTCTTGAGCTTA+AGG | + | chr1_1:23915844-23915863 | Msa0014920:CDS | 40.0% | |
| ACTCAAGAAGCTTCAAATGG+AGG | - | chr1_1:23915878-23915897 | None:intergenic | 40.0% | |
| AATTTGTGTCACAGTGGCTT+TGG | - | chr1_1:23915987-23916006 | None:intergenic | 40.0% | |
| !! | GTGACACAAATTCAAGTTGC+TGG | + | chr1_1:23915995-23916014 | Msa0014920:CDS | 40.0% |
| !! | AATTCAAGTTGCTGGAATGG+GGG | + | chr1_1:23916003-23916022 | Msa0014920:CDS | 40.0% |
| ! | ACATTGCAAGCAGACCTTTT+CGG | + | chr1_1:23916211-23916230 | Msa0014920:CDS | 40.0% |
| AAGTTGCACCTTCAATTCTC+TGG | + | chr1_1:23916245-23916264 | Msa0014920:intron | 40.0% | |
| AGTTTGAGCCAGAGAATTGA+AGG | - | chr1_1:23916256-23916275 | None:intergenic | 40.0% | |
| ! | TGAGCCATGAAAGACTAGTT+TGG | - | chr1_1:23916528-23916547 | None:intergenic | 40.0% |
| AGTGATTGTGGTTGATCAAC+AGG | + | chr1_1:23916738-23916757 | Msa0014920:CDS | 40.0% | |
| GTGATTGTGGTTGATCAACA+GGG | + | chr1_1:23916739-23916758 | Msa0014920:CDS | 40.0% | |
| CGGCAAAGAATTGCAATTGT+TGG | + | chr1_1:23916763-23916782 | Msa0014920:CDS | 40.0% | |
| AAGTAGACCACTAATCCTTG+TGG | + | chr1_1:23916801-23916820 | Msa0014920:intron | 40.0% | |
| GATACTTAGTATGAGACGGA+TGG | - | chr1_1:23916874-23916893 | None:intergenic | 40.0% | |
| !! | GGTGGATTGAGATACAAGAA+GGG | - | chr1_1:23916978-23916997 | None:intergenic | 40.0% |
| !! | AGGTGGATTGAGATACAAGA+AGG | - | chr1_1:23916979-23916998 | None:intergenic | 40.0% |
| ATAGCAGTGCTATAGTAGAG+CGG | + | chr1_1:23917026-23917045 | Msa0014920:intron | 40.0% | |
| ATAGCGGCGTTATAAAGTAG+CGG | + | chr1_1:23917219-23917238 | Msa0014920:intron | 40.0% | |
| AAGGGTTAGATAAGGGATTG+TGG | - | chr1_1:23917671-23917690 | None:intergenic | 40.0% | |
| GACTTACTCTATTGTGATGG+TGG | + | chr1_1:23917854-23917873 | Msa0014920:intron | 40.0% | |
| AATGGATGGACGAAGTAAGA+TGG | + | chr1_1:23918262-23918281 | Msa0014920:intron | 40.0% | |
| TGTTGTCTGTTTCCCTATTC+AGG | + | chr1_1:23918553-23918572 | Msa0014920:intron | 40.0% | |
| ! | CCAACTTTTAGTGATGTCAC+TGG | - | chr1_1:23918604-23918623 | None:intergenic | 40.0% |
| CCAGTGACATCACTAAAAGT+TGG | + | chr1_1:23918601-23918620 | Msa0014920:CDS | 40.0% | |
| CTCTAGCATCAAAGTTGCAA+AGG | - | chr1_1:23918777-23918796 | None:intergenic | 40.0% | |
| TTGCAACTTTGATGCTAGAG+TGG | + | chr1_1:23918777-23918796 | Msa0014920:intron | 40.0% | |
| GGAAAGGAGCAGCTTATATT+TGG | + | chr1_1:23918821-23918840 | Msa0014920:three_prime_UTR | 40.0% | |
| GGAATTGTGTAAAGTCCAGT+TGG | + | chr1_1:23918924-23918943 | Msa0014920:three_prime_UTR | 40.0% | |
| GGCAAAAGATGCTTCACTTT+AGG | + | chr1_1:23918945-23918964 | Msa0014920:three_prime_UTR | 40.0% | |
| TTCTTCTTGGACACCATTGG+AGG | + | chr1_1:23913398-23913417 | Msa0014920:CDS | 45.0% | |
| ATGACTGCAGCTGTTGAAAG+AGG | + | chr1_1:23913477-23913496 | Msa0014920:CDS | 45.0% | |
| GACCAATCATTGGCAAGATG+AGG | - | chr1_1:23913534-23913553 | None:intergenic | 45.0% | |
| TTTCGCAATTAGGAGGCTAG+GGG | - | chr1_1:23913719-23913738 | None:intergenic | 45.0% | |
| ! | GGTGTTGGAGGTTACAATGA+AGG | - | chr1_1:23913751-23913770 | None:intergenic | 45.0% |
| TCCAACACCTTCGCTATGTT+GGG | + | chr1_1:23913762-23913781 | Msa0014920:intron | 45.0% | |
| !! | CCATACAAAACCGGCTTGTA+TGG | - | chr1_1:23913864-23913883 | None:intergenic | 45.0% |
| !! | CCATACAAGCCGGTTTTGTA+TGG | + | chr1_1:23913861-23913880 | Msa0014920:intron | 45.0% |
| TCCCGCATTGTCCATACTTT+AGG | + | chr1_1:23913946-23913965 | Msa0014920:intron | 45.0% | |
| GCCTAAAGTATGGACAATGC+GGG | - | chr1_1:23913950-23913969 | None:intergenic | 45.0% | |
| TTCCTGATAAGGAGGCTAGA+GGG | - | chr1_1:23914027-23914046 | None:intergenic | 45.0% | |
| AGCCTCCTTATCAGGAACAT+TGG | + | chr1_1:23914030-23914049 | Msa0014920:intron | 45.0% | |
| GACCAATGTTCCTGATAAGG+AGG | - | chr1_1:23914035-23914054 | None:intergenic | 45.0% | |
| GAGGACCAATGTTCCTGATA+AGG | - | chr1_1:23914038-23914057 | None:intergenic | 45.0% | |
| CAGTGCAGAGATTATGAAGG+AGG | - | chr1_1:23914057-23914076 | None:intergenic | 45.0% | |
| CTCCTTCATAATCTCTGCAC+TGG | + | chr1_1:23914055-23914074 | Msa0014920:intron | 45.0% | |
| AAGAGGACAGATGACTGCAA+TGG | - | chr1_1:23914643-23914662 | None:intergenic | 45.0% | |
| !! | CTAAGTCGTTCTAGTTCCTC+CGG | - | chr1_1:23914735-23914754 | None:intergenic | 45.0% |
| ACTAGAACGACTTAGACCTG+AGG | + | chr1_1:23914740-23914759 | Msa0014920:CDS | 45.0% | |
| ! | TTTTCTGCTTGCTCATCCTC+AGG | - | chr1_1:23914759-23914778 | None:intergenic | 45.0% |
| GTCTCATATAGTCCTTACGG+TGG | + | chr1_1:23914862-23914881 | Msa0014920:intron | 45.0% | |
| !! | GGGTTGATGTTTCAGTTGTG+AGG | - | chr1_1:23914962-23914981 | None:intergenic | 45.0% |
| AACATCAACCCAATCTGTGC+CGG | + | chr1_1:23914971-23914990 | Msa0014920:intron | 45.0% | |
| ! | TTTTCTCACCCGTAAGGATG+TGG | + | chr1_1:23915088-23915107 | Msa0014920:intron | 45.0% |
| CACCTTTAAGCAGAAGTCCA+GGG | - | chr1_1:23915118-23915137 | None:intergenic | 45.0% | |
| ACTTCTGCTTAAAGGTGGTG+AGG | + | chr1_1:23915121-23915140 | Msa0014920:intron | 45.0% | |
| CCCAGCATTTGCCATCTTTA+AGG | + | chr1_1:23915210-23915229 | Msa0014920:intron | 45.0% | |
| CGAAGCTCAGACATTTCTTG+AGG | + | chr1_1:23915680-23915699 | Msa0014920:CDS | 45.0% | |
| !! | TTAGTAGGGGTGTTACAGGT+CGG | + | chr1_1:23915713-23915732 | Msa0014920:intron | 45.0% |
| GCACTTGAACATGGCTTAGA+TGG | + | chr1_1:23915797-23915816 | Msa0014920:CDS | 45.0% | |
| ! | AGTCTTATGAGACCTGGTGA+AGG | + | chr1_1:23916049-23916068 | Msa0014920:CDS | 45.0% |
| ! | TAGGTTGGATCCTTTGCTAG+AGG | + | chr1_1:23916150-23916169 | Msa0014920:intron | 45.0% |
| ! | CATTGCAAGCAGACCTTTTC+GGG | + | chr1_1:23916212-23916231 | Msa0014920:CDS | 45.0% |
| CTCTACTCTCTCTACTTCCT+TGG | + | chr1_1:23916559-23916578 | Msa0014920:intron | 45.0% | |
| TTGTGGTTGATCAACAGGGT+CGG | + | chr1_1:23916743-23916762 | Msa0014920:CDS | 45.0% | |
| TAGACCACTAATCCTTGTGG+AGG | + | chr1_1:23916804-23916823 | Msa0014920:intron | 45.0% | |
| TTTGCCTCCACAAGGATTAG+TGG | - | chr1_1:23916811-23916830 | None:intergenic | 45.0% | |
| ACTAATCCTTGTGGAGGCAA+AGG | + | chr1_1:23916810-23916829 | Msa0014920:intron | 45.0% | |
| AATGGAGGGAGTAGCAGTAA+TGG | + | chr1_1:23917405-23917424 | Msa0014920:intron | 45.0% | |
| AGACAGGTAATATGAGAGGG+AGG | + | chr1_1:23917602-23917621 | Msa0014920:intron | 45.0% | |
| GGGGACATCTACCAAATCAA+TGG | + | chr1_1:23918062-23918081 | Msa0014920:intron | 45.0% | |
| !! | GCTTTAGTTTGTCCCGTACA+AGG | + | chr1_1:23918482-23918501 | Msa0014920:CDS | 45.0% |
| !! | GTGAAGCATCTTTTGCCAAC+TGG | - | chr1_1:23918942-23918961 | None:intergenic | 45.0% |
| !!! | TAAAAAAATAATATTTTCTT+TGG | - | chr1_1:23914269-23914288 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTGATAT+AGG | - | chr1_1:23918128-23918147 | None:intergenic | 5.0% |
| GTGTTGGAAGTAGAAGGTGG+TGG | - | chr1_1:23913330-23913349 | None:intergenic | 50.0% | |
| CGTGTGTTGGAAGTAGAAGG+TGG | - | chr1_1:23913333-23913352 | None:intergenic | 50.0% | |
| ! | TTTGAGGCGCAAACGTGTGT+TGG | - | chr1_1:23913346-23913365 | None:intergenic | 50.0% |
| TGGACACCATTGGAGGATAC+TGG | + | chr1_1:23913405-23913424 | Msa0014920:CDS | 50.0% | |
| CTGCAGCTGTTGAAAGAGGA+TGG | + | chr1_1:23913481-23913500 | Msa0014920:CDS | 50.0% | |
| !! | CAACATAGCGAAGGTGTTGG+AGG | - | chr1_1:23913763-23913782 | None:intergenic | 50.0% |
| CTCCAACACCTTCGCTATGT+TGG | + | chr1_1:23913761-23913780 | Msa0014920:intron | 50.0% | |
| TCCTGATAAGGAGGCTAGAG+GGG | - | chr1_1:23914026-23914045 | None:intergenic | 50.0% | |
| GTTCCTGATAAGGAGGCTAG+AGG | - | chr1_1:23914028-23914047 | None:intergenic | 50.0% | |
| ! | GACAACTATCCAAGGGGTGT+GGG | - | chr1_1:23914099-23914118 | None:intergenic | 50.0% |
| TGACAACTATCCAAGGGGTG+TGG | - | chr1_1:23914100-23914119 | None:intergenic | 50.0% | |
| ! | TTTTGACGTTTCGACACCGG+AGG | + | chr1_1:23914716-23914735 | Msa0014920:CDS | 50.0% |
| !! | TCAAGCATTGGTCCACCGTA+AGG | - | chr1_1:23914877-23914896 | None:intergenic | 50.0% |
| !! | TGCCGGTTCGGCAAATAACA+AGG | + | chr1_1:23914988-23915007 | Msa0014920:intron | 50.0% |
| GACCCTGGACTTCTGCTTAA+AGG | + | chr1_1:23915113-23915132 | Msa0014920:intron | 50.0% | |
| CCACCTTTAAGCAGAAGTCC+AGG | - | chr1_1:23915119-23915138 | None:intergenic | 50.0% | |
| CCTGGACTTCTGCTTAAAGG+TGG | + | chr1_1:23915116-23915135 | Msa0014920:intron | 50.0% | |
| GGTGAGTCACATGTGGTCTA+CGG | - | chr1_1:23915191-23915210 | None:intergenic | 50.0% | |
| ! | CTCTGCAGTCTTATGAGACC+TGG | + | chr1_1:23916043-23916062 | Msa0014920:CDS | 50.0% |
| CATACGAGAAGTCCTTCACC+AGG | - | chr1_1:23916064-23916083 | None:intergenic | 50.0% | |
| !!! | CAGACCTTTTCGGGTGAATG+CGG | + | chr1_1:23916221-23916240 | Msa0014920:CDS | 50.0% |
| CTTACCGCATTCACCCGAAA+AGG | - | chr1_1:23916228-23916247 | None:intergenic | 50.0% | |
| ACAGCAATGTAGGCGTGAAC+TGG | - | chr1_1:23916670-23916689 | None:intergenic | 50.0% | |
| CACAAACCTTTGCCTCCACA+AGG | - | chr1_1:23916819-23916838 | None:intergenic | 50.0% | |
| TGAGACAGAGGGAGTAACAC+TGG | - | chr1_1:23917090-23917109 | None:intergenic | 50.0% | |
| ATTTGGTAGATGTCCCCCCA+TGG | - | chr1_1:23918059-23918078 | None:intergenic | 50.0% | |
| ! | GCCCAACATAGCGAAGGTGT+TGG | - | chr1_1:23913766-23913785 | None:intergenic | 55.0% |
| TTCGCTATGTTGGGCGCGAA+GGG | + | chr1_1:23913771-23913790 | Msa0014920:intron | 55.0% | |
| GCAGCTCTCACCATACAAGC+CGG | + | chr1_1:23913851-23913870 | Msa0014920:intron | 55.0% | |
| ATGCGGGATGCCCAACAAGA+GGG | - | chr1_1:23913934-23913953 | None:intergenic | 55.0% | |
| AATGCGGGATGCCCAACAAG+AGG | - | chr1_1:23913935-23913954 | None:intergenic | 55.0% | |
| !! | GCTCATTGGTTCGAGCGTGA+GGG | + | chr1_1:23913968-23913987 | Msa0014920:intron | 55.0% |
| !! | CTCATTGGTTCGAGCGTGAG+GGG | + | chr1_1:23913969-23913988 | Msa0014920:intron | 55.0% |
| !! | TCATTGGTTCGAGCGTGAGG+GGG | + | chr1_1:23913970-23913989 | Msa0014920:intron | 55.0% |
| CCTGATAAGGAGGCTAGAGG+GGG | - | chr1_1:23914025-23914044 | None:intergenic | 55.0% | |
| GCAATGGCTGTACTCCGTCA+TGG | - | chr1_1:23914627-23914646 | None:intergenic | 55.0% | |
| !! | CAACCCAATCTGTGCCGGTT+CGG | + | chr1_1:23914976-23914995 | Msa0014920:intron | 55.0% |
| TTGCCGAACCGGCACAGATT+GGG | - | chr1_1:23914982-23915001 | None:intergenic | 55.0% | |
| TTTGCCGAACCGGCACAGAT+TGG | - | chr1_1:23914983-23915002 | None:intergenic | 55.0% | |
| TCTCACCCGTAAGGATGTGG+TGG | + | chr1_1:23915091-23915110 | Msa0014920:intron | 55.0% | |
| AGGGTCCACCACATCCTTAC+GGG | - | chr1_1:23915099-23915118 | None:intergenic | 55.0% | |
| CAGGGTCCACCACATCCTTA+CGG | - | chr1_1:23915100-23915119 | None:intergenic | 55.0% | |
| GAGTCACATGTGGTCTACGG+TGG | - | chr1_1:23915188-23915207 | None:intergenic | 55.0% | |
| ATGCTGGGGTGAGTCACATG+TGG | - | chr1_1:23915198-23915217 | None:intergenic | 55.0% | |
| !! | AGGGGTGTTACAGGTCGGTT+TGG | + | chr1_1:23915718-23915737 | Msa0014920:intron | 55.0% |
| ! | CACGCCTACATTGCTGTTCC+AGG | + | chr1_1:23916673-23916692 | Msa0014920:CDS | 55.0% |
| ! | GCCTACATTGCTGTTCCAGG+CGG | + | chr1_1:23916676-23916695 | Msa0014920:CDS | 55.0% |
| ACCGCCTGGAACAGCAATGT+AGG | - | chr1_1:23916680-23916699 | None:intergenic | 55.0% | |
| AGGTAGGATGTTCTACCGCC+TGG | - | chr1_1:23916694-23916713 | None:intergenic | 55.0% | |
| CTTCGCGCCCAACATAGCGA+AGG | - | chr1_1:23913772-23913791 | None:intergenic | 60.0% | |
| CTTCGCTATGTTGGGCGCGA+AGG | + | chr1_1:23913770-23913789 | Msa0014920:intron | 60.0% | |
| AGAGCCTGGAGCCCTCTTGT+TGG | + | chr1_1:23913920-23913939 | Msa0014920:intron | 60.0% | |
| GAGCCTGGAGCCCTCTTGTT+GGG | + | chr1_1:23913921-23913940 | Msa0014920:intron | 60.0% | |
| ATGCCCAACAAGAGGGCTCC+AGG | - | chr1_1:23913927-23913946 | None:intergenic | 60.0% | |
| !! | GGCTCATTGGTTCGAGCGTG+AGG | + | chr1_1:23913967-23913986 | Msa0014920:intron | 60.0% |
| CCCCCTCTAGCCTCCTTATC+AGG | + | chr1_1:23914022-23914041 | Msa0014920:intron | 60.0% | |
| ! | CTATCCAAGGGGTGTGGGTG+TGG | - | chr1_1:23914094-23914113 | None:intergenic | 60.0% |
| !! | CGTAAGGATGTGGTGGACCC+TGG | + | chr1_1:23915098-23915117 | Msa0014920:intron | 60.0% |
| CAAGGAGGGGCTCGACATAC+CGG | + | chr1_1:23918646-23918665 | Msa0014920:CDS | 60.0% | |
| TGAGCCACACCCACACCCCT+TGG | + | chr1_1:23914087-23914106 | Msa0014920:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 23913253 | 23919036 | 23913253 | ID=Msa0014920;Name=Msa0014920 |
| chr1_1 | mRNA | 23913253 | 23919036 | 23913253 | ID=Msa0014920-mRNA-1;Parent=Msa0014920;Name=Msa0014920-mRNA-1;_AED=0.22;_eAED=0.22;_QI=35|0.77|0.8|1|0.88|0.8|10|247|380 |
| chr1_1 | exon | 23913253 | 23913555 | 23913253 | ID=Msa0014920-mRNA-1:exon:8281;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23914640 | 23914785 | 23914640 | ID=Msa0014920-mRNA-1:exon:8282;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23915603 | 23915701 | 23915603 | ID=Msa0014920-mRNA-1:exon:8283;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23915797 | 23915865 | 23915797 | ID=Msa0014920-mRNA-1:exon:8284;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23915938 | 23916078 | 23915938 | ID=Msa0014920-mRNA-1:exon:8285;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23916153 | 23916242 | 23916153 | ID=Msa0014920-mRNA-1:exon:8286;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23916664 | 23916789 | 23916664 | ID=Msa0014920-mRNA-1:exon:8287;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23918428 | 23918503 | 23918428 | ID=Msa0014920-mRNA-1:exon:8288;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23918575 | 23918707 | 23918575 | ID=Msa0014920-mRNA-1:exon:8289;Parent=Msa0014920-mRNA-1 |
| chr1_1 | exon | 23918795 | 23919036 | 23918795 | ID=Msa0014920-mRNA-1:exon:8290;Parent=Msa0014920-mRNA-1 |
| chr1_1 | five_prime_UTR | 23913253 | 23913287 | 23913253 | ID=Msa0014920-mRNA-1:five_prime_utr;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23913288 | 23913555 | 23913288 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23914640 | 23914785 | 23914640 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23915603 | 23915701 | 23915603 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23915797 | 23915865 | 23915797 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23915938 | 23916078 | 23915938 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23916153 | 23916242 | 23916153 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23916664 | 23916789 | 23916664 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23918428 | 23918503 | 23918428 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | CDS | 23918575 | 23918702 | 23918575 | ID=Msa0014920-mRNA-1:cds;Parent=Msa0014920-mRNA-1 |
| chr1_1 | three_prime_UTR | 23918703 | 23918707 | 23918703 | ID=Msa0014920-mRNA-1:three_prime_utr;Parent=Msa0014920-mRNA-1 |
| chr1_1 | three_prime_UTR | 23918795 | 23919036 | 23918795 | ID=Msa0014920-mRNA-1:three_prime_utr;Parent=Msa0014920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
