AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1037000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1037000 MtrunA17_Chr7g0261561 97.382 573 15 0 20 592 163 735 0.0 1149
Msa1037000 MtrunA17_Chr4g0041761 59.829 585 222 7 20 592 174 757 0.0 703
Msa1037000 MtrunA17_Chr1g0187391 51.034 580 221 7 19 594 1 521 0.0 603
Msa1037000 MtrunA17_Chr5g0408241 46.749 569 274 8 48 594 267 828 2.12e-165 492
Msa1037000 MtrunA17_Chr8g0369761 44.480 625 295 11 15 594 192 809 1.87e-162 484
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1037000 AT4G28570.1 62.500 584 209 3 20 594 163 745 0.0 720
Msa1037000 AT4G28570.2 62.500 584 209 3 20 594 163 745 0.0 720
Msa1037000 AT3G23410.1 60.381 578 218 6 23 591 165 740 0.0 708
Msa1037000 AT3G23410.2 60.381 578 218 6 23 591 97 672 0.0 707
Msa1037000 AT1G03990.1 57.461 583 237 5 20 594 176 755 0.0 663
Msa1037000 AT4G19380.1 43.842 609 299 11 17 594 129 725 1.28e-152 456
Msa1037000 AT4G19380.2 43.842 609 299 11 17 594 171 767 2.58e-152 457

Find 136 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAAGTCTTTAAGAATTT+TGG 0.142745 7_1:-73494683 Msa1037000:CDS
TCGAAACACAGTTCCCATTT+TGG 0.187482 7_1:-73496235 Msa1037000:CDS
GTTTCACGGTTAAACCAAAA+TGG 0.221013 7_1:+73496221 None:intergenic
TAGTTACTTTGGATTCTATT+TGG 0.246811 7_1:+73495130 None:intergenic
AAAATCTTAGAATTGGATTA+AGG 0.256561 7_1:-73494702 Msa1037000:CDS
TTGTAGAACCGGAGATAAAA+AGG 0.259716 7_1:-73495322 Msa1037000:CDS
CCATCCAGTTCAATTTGCTT+GGG 0.271230 7_1:-73495022 Msa1037000:CDS
ATTATAGAAGCACCTGCTTT+AGG 0.296752 7_1:-73494895 Msa1037000:CDS
GACAGAGAAAATCTTAGAAT+TGG 0.302166 7_1:-73494709 Msa1037000:CDS
AAGTTATGATTCCTCCTTCA+TGG 0.302332 7_1:+73494959 None:intergenic
TGAAGGTTCCTTCCAATGTT+TGG 0.313050 7_1:+73495048 None:intergenic
CTTCATCTTCAGTGACTTCA+AGG 0.331159 7_1:+73495865 None:intergenic
TCCATCCAGTTCAATTTGCT+TGG 0.335666 7_1:-73495023 Msa1037000:CDS
CTTGATACTGTCACGGTTGT+CGG 0.340575 7_1:-73494568 Msa1037000:CDS
GTGGAGGTACTGCTATAAAC+TGG 0.344574 7_1:-73495599 Msa1037000:CDS
TTGTCTCTATTAGTCCTTCC+TGG 0.345240 7_1:+73495934 None:intergenic
AAAGTGATCATCCTAGAAAA+AGG 0.349522 7_1:-73495747 Msa1037000:CDS
CTGTTGAGGTTGGAACTTAT+AGG 0.352665 7_1:-73494648 Msa1037000:CDS
AATCCAATGTGGAAGGCAAT+AGG 0.357171 7_1:-73496005 Msa1037000:CDS
AGGGATCAAAGAAGAAGAAT+TGG 0.361473 7_1:-73494599 Msa1037000:CDS
TGTCTCTAACCAATGCAAAA+AGG 0.362568 7_1:+73494788 None:intergenic
CATTGTCCAAAGTTCACTTC+TGG 0.369671 7_1:+73494534 None:intergenic
TGCTGTTACGGTTGTAGAAC+CGG 0.371663 7_1:-73495333 Msa1037000:CDS
GTTTAGTTCTGCACATCAAA+TGG 0.373441 7_1:-73494512 Msa1037000:CDS
CGGAAAGGGTGTGAGAGAAT+TGG 0.375092 7_1:-73495411 Msa1037000:CDS
TCCTGGAGAGGCCTCTTCTT+CGG 0.378893 7_1:+73495951 None:intergenic
GGCCTTTCTCACTCAGGGAT+TGG 0.385174 7_1:+73495886 None:intergenic
ACATGATGAAATAGTTACTT+TGG 0.389119 7_1:+73495119 None:intergenic
GGATTGGATTAATGTAGAAT+TGG 0.391272 7_1:+73495902 None:intergenic
TTCTCAAGATTATTCTTCCT+TGG 0.392128 7_1:-73495712 Msa1037000:CDS
GAGGGTGCAGTTGATGAGAA+TGG 0.395238 7_1:-73494460 Msa1037000:CDS
TATTGCGGTTCGTGCTGTTA+CGG 0.407724 7_1:-73495345 Msa1037000:CDS
TGATGAGAATGGAGAAAGTT+GGG 0.414388 7_1:-73494449 Msa1037000:CDS
GCTTTCAAAATCAAGTTCTT+CGG 0.428581 7_1:-73495431 Msa1037000:CDS
ATGAACGAGCTTTATGAATC+AGG 0.431908 7_1:-73495678 Msa1037000:CDS
TTCTTATAGACTTGATCAAA+TGG 0.433097 7_1:-73494731 Msa1037000:CDS
TTTGCATTGGTTAGAGACAT+AGG 0.434303 7_1:-73494784 Msa1037000:CDS
CATTCCTTCTTAACAGAGTC+AGG 0.435806 7_1:+73495558 None:intergenic
TGCAACTCCTCCACCGCTAC+CGG 0.435895 7_1:+73495797 None:intergenic
ATAATAGAAGATGGAAAGAA+TGG 0.440166 7_1:-73495222 Msa1037000:CDS
CATGATGTAACTAGTATTGT+TGG 0.442797 7_1:-73494213 Msa1037000:three_prime_UTR
ATCCAATGTGGAAGGCAATA+GGG 0.443972 7_1:-73496004 Msa1037000:CDS
AAAATCAAGTTCTTCGGAAA+GGG 0.445304 7_1:-73495425 Msa1037000:CDS
GATCAAAGAAGAAGAATTGG+AGG 0.454354 7_1:-73494596 Msa1037000:CDS
GTATTAGTTCCATGGATCTC+AGG 0.457639 7_1:-73494856 Msa1037000:CDS
ACCGAAGAAGAGGCCTCTCC+AGG 0.458071 7_1:-73495952 Msa1037000:CDS
GATGCTGTCATCGTTGGTTC+CGG 0.460504 7_1:-73495816 Msa1037000:CDS
TAGCCCCAAGCAAATTGAAC+TGG 0.461727 7_1:+73495018 None:intergenic
CGACGGTAAAATGATGATCT+TGG 0.462702 7_1:-73495637 Msa1037000:CDS
GCGGCGGGAGCTGTTGAGGT+TGG 0.464809 7_1:-73494658 Msa1037000:CDS
GAGAAATTCATAATAGAAGA+TGG 0.465338 7_1:-73495231 Msa1037000:CDS
CAAAATCAAGTTCTTCGGAA+AGG 0.466408 7_1:-73495426 Msa1037000:CDS
TCACATGTTTACCAGTTTCA+CGG 0.469399 7_1:+73496207 None:intergenic
TACCCTATTGCCTTCCACAT+TGG 0.470515 7_1:+73496002 None:intergenic
TTGATGAGAATGGAGAAAGT+TGG 0.475999 7_1:-73494450 Msa1037000:CDS
CAAATGGGAAGTTGTAGAAT+GGG 0.480556 7_1:-73494496 Msa1037000:CDS
GTAGATTGAATGGTTACCAT+AGG 0.483305 7_1:+73494367 None:intergenic
TTTCACGGTTAAACCAAAAT+GGG 0.484806 7_1:+73496222 None:intergenic
ACTAATACTGAAAATGATCC+AGG 0.486166 7_1:+73494871 None:intergenic
TTGGTTGATGCTGTTGAAAA+CGG 0.486532 7_1:-73495282 Msa1037000:CDS
TCAAATGGGAAGTTGTAGAA+TGG 0.486816 7_1:-73494497 Msa1037000:CDS
ACAGTATGCTGTAGATTGAA+TGG 0.487635 7_1:+73494357 None:intergenic
TTCAAGGCCTTTCTCACTCA+GGG 0.488063 7_1:+73495881 None:intergenic
CATCCAGTTCAATTTGCTTG+GGG 0.488374 7_1:-73495021 Msa1037000:CDS
GTCATCGTTGGTTCCGGTAG+CGG 0.489261 7_1:-73495810 Msa1037000:CDS
ATCCAATCCCTGAGTGAGAA+AGG 0.490284 7_1:-73495888 Msa1037000:CDS
TTTAGTTCTGCACATCAAAT+GGG 0.491700 7_1:-73494511 Msa1037000:CDS
GGAGAAAGTTGGGAAGCAAA+AGG 0.497184 7_1:-73494439 Msa1037000:CDS
TTGGTTAGAGACATAGGATC+AGG 0.497758 7_1:-73494778 Msa1037000:CDS
TACAAAATCCAAACATTGGA+AGG 0.499960 7_1:-73495056 Msa1037000:CDS
GAAAACATGACACACTTAAG+TGG 0.500258 7_1:-73494988 Msa1037000:CDS
GTTGGTTCCGGTAGCGGTGG+AGG 0.501529 7_1:-73495804 Msa1037000:CDS
AACACCTGACTCTGTTAAGA+AGG 0.504540 7_1:-73495562 Msa1037000:CDS
ACAAAGAGAAAGAATTGCTC+AGG 0.508005 7_1:-73495198 Msa1037000:CDS
CTCTGATTATCAATCTGCTA+TGG 0.509218 7_1:-73495502 Msa1037000:CDS
TCAGGAGAAGTAAGAAGTGA+AGG 0.509587 7_1:-73494760 Msa1037000:CDS
TGCAGTTGGTGTTAACCCTA+TGG 0.514783 7_1:-73494383 Msa1037000:CDS
ATTGAACTGGATGGAGATGA+AGG 0.516885 7_1:+73495031 None:intergenic
ATGGGTGAGAATGAAGAAGA+GGG 0.517130 7_1:-73494478 Msa1037000:CDS
AAAAGTTGAAACCGAAGAAG+AGG 0.517257 7_1:-73495962 Msa1037000:CDS
GAGAAAGTTGGGAAGCAAAA+GGG 0.519118 7_1:-73494438 Msa1037000:CDS
TTGCTGCAGACAGATGTAGA+TGG 0.521268 7_1:-73496032 Msa1037000:intron
AGTCCACTAGAAATCATTAG+AGG 0.522212 7_1:+73495078 None:intergenic
AACGGCGCAGTTATCCTCAC+TGG 0.522905 7_1:-73495264 Msa1037000:CDS
CTTCAAGGCCTTTCTCACTC+AGG 0.525253 7_1:+73495880 None:intergenic
AATTGCTCAGGAGTGATAGC+TGG 0.531778 7_1:-73495186 Msa1037000:CDS
GATTCAGTATGCAGAAGGAT+TGG 0.536961 7_1:-73495480 Msa1037000:CDS
GGTAAAATGATGATCTTGGC+TGG 0.539807 7_1:-73495633 Msa1037000:CDS
AAAAGGGTACTGACTCAACT+TGG 0.540723 7_1:-73495305 Msa1037000:CDS
GGGTTAACACCAACTGCACT+AGG 0.549107 7_1:+73494388 None:intergenic
ATCTTGGCTGGCTCAACAGT+CGG 0.554171 7_1:-73495621 Msa1037000:CDS
AATGGGTGAGAATGAAGAAG+AGG 0.555197 7_1:-73494479 Msa1037000:CDS
GGTTGCGGCGGGAGCTGTTG+AGG 0.556378 7_1:-73494662 Msa1037000:CDS
GGACTACAAAATCCAAACAT+TGG 0.561944 7_1:-73495060 Msa1037000:CDS
CTGACTCTGTTAAGAAGGAA+TGG 0.564307 7_1:-73495557 Msa1037000:CDS
GTTGGAACTTATAGGAGTGA+TGG 0.565498 7_1:-73494640 Msa1037000:CDS
GCTGGCTCAACAGTCGGTGG+AGG 0.567887 7_1:-73495615 Msa1037000:CDS
ATCGTTGGTTCCGGTAGCGG+TGG 0.568087 7_1:-73495807 Msa1037000:CDS
AAAGTAACTATTTCATCATG+TGG 0.568702 7_1:-73495117 Msa1037000:CDS
TAGATTGAATGGTTACCATA+GGG 0.569161 7_1:+73494368 None:intergenic
GTTCATCGCTGAACTTTCCA+AGG 0.572297 7_1:+73495695 None:intergenic
TCTATTAGTCCTTCCTGGAG+AGG 0.575506 7_1:+73495939 None:intergenic
GTGGAAGGCAATAGGGTACA+AGG 0.575769 7_1:-73495997 Msa1037000:CDS
AAATGCGATGCTGTCATCGT+TGG 0.578309 7_1:-73495822 Msa1037000:CDS
AATGATCCAGGTCCTAAAGC+AGG 0.580745 7_1:+73494883 None:intergenic
GCTGCAATTCTTGCAAACTC+AGG 0.581743 7_1:-73495774 Msa1037000:CDS
CTATGGATTCAGTATGCAGA+AGG 0.583898 7_1:-73495485 Msa1037000:CDS
GAAGCACCTGCTTTAGGACC+TGG 0.586542 7_1:-73494889 Msa1037000:CDS
GGAGTTTCTTGATACTGTCA+CGG 0.587716 7_1:-73494575 Msa1037000:CDS
TGGCTATAATCCAATGTGGA+AGG 0.588681 7_1:-73496012 Msa1037000:CDS
TGTGTCGGACTAACTAGCAA+TGG 0.589499 7_1:-73494148 Msa1037000:three_prime_UTR
GGGTACTGACTCAACTTGGT+TGG 0.591888 7_1:-73495301 Msa1037000:CDS
ATATCGAGTCCTGAGATCCA+TGG 0.595456 7_1:+73494847 None:intergenic
GCTTCAGAAGATCATTATTG+CGG 0.597873 7_1:-73495360 Msa1037000:CDS
GAGTGATAGCTGGAACAAGT+TGG 0.601974 7_1:-73495176 Msa1037000:CDS
AAAGGGTTGTATGTGTGTGA+TGG 0.608484 7_1:-73494421 Msa1037000:CDS
CCCAAGCAAATTGAACTGGA+TGG 0.610780 7_1:+73495022 None:intergenic
GATACTGTCACGGTTGTCGG+TGG 0.614491 7_1:-73494565 Msa1037000:CDS
ACTCGATATGAAAGACAGAA+TGG 0.616506 7_1:-73494833 Msa1037000:CDS
AAGAAGAGGCCTCTCCAGGA+AGG 0.616993 7_1:-73495948 Msa1037000:CDS
TGATAGCTGGAACAAGTTGG+AGG 0.618232 7_1:-73495173 Msa1037000:CDS
TTGGCTGGCTCAACAGTCGG+TGG 0.619706 7_1:-73495618 Msa1037000:CDS
TCTGTCAAAGTATATTGTGT+CGG 0.620571 7_1:-73494163 Msa1037000:three_prime_UTR
CCTCCTCTAATGATTTCTAG+TGG 0.623746 7_1:-73495081 Msa1037000:CDS
TGGAGGTACTGCTATAAACT+GGG 0.626757 7_1:-73495598 Msa1037000:CDS
TTAAGTGGTAATAACCATGA+AGG 0.627164 7_1:-73494973 Msa1037000:CDS
AACGAGCTTTATGAATCAGG+TGG 0.631552 7_1:-73495675 Msa1037000:CDS
AGTGGTAATAACCATGAAGG+AGG 0.637889 7_1:-73494970 Msa1037000:CDS
TAATCAGAGCTTGTGAAAAG+CGG 0.638436 7_1:+73495516 None:intergenic
CCACTAGAAATCATTAGAGG+AGG 0.647396 7_1:+73495081 None:intergenic
GGAATCATGCCAACTCTCGA+CGG 0.650023 7_1:-73495654 Msa1037000:CDS
CAAAGTTCACTTCTGGACCG+CGG 0.689159 7_1:+73494541 None:intergenic
TAGATGGCTATAATCCAATG+TGG 0.704268 7_1:-73496016 Msa1037000:CDS
TGTGACAGATAAATGCAACA+AGG 0.712817 7_1:-73495457 Msa1037000:CDS
TCTCAGCTCTACATCCAGTG+AGG 0.723767 7_1:+73495250 None:intergenic
GAAGGCAATAGGGTACAAGG+TGG 0.747351 7_1:-73495994 Msa1037000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTTTTAATTAAAACAT+TGG - chr7_1:73494305-73494324 Msa1037000:exon 10.0%
!!! TCATTTTTAATTAAAACATT+GGG - chr7_1:73494306-73494325 Msa1037000:exon 10.0%
!!! ATCATTTTTAATTAAAACAT+TGG - chr7_1:73494305-73494324 Msa1037000:exon 10.0%
!!! TCATTTTTAATTAAAACATT+GGG - chr7_1:73494306-73494325 Msa1037000:exon 10.0%
!! ATATGATCTACATACAAAAT+TGG - chr7_1:73494207-73494226 Msa1037000:three_prime_UTR 20.0%
!! AAATTGGTCATTTAAAGAAA+TGG - chr7_1:73494223-73494242 Msa1037000:three_prime_UTR 20.0%
!! AAAATCTTAGAATTGGATTA+AGG - chr7_1:73495677-73495696 Msa1037000:CDS 20.0%
!! ATATGATCTACATACAAAAT+TGG - chr7_1:73494207-73494226 Msa1037000:three_prime_UTR 20.0%
!! AAATTGGTCATTTAAAGAAA+TGG - chr7_1:73494223-73494242 Msa1037000:three_prime_UTR 20.0%
!! AAAATCTTAGAATTGGATTA+AGG - chr7_1:73495677-73495696 Msa1037000:CDS 20.0%
!!! GATTTTCATCAGCTTTATAA+CGG + chr7_1:73494269-73494288 None:intergenic 25.0%
! GTTATAAAGCTGATGAAAAT+CGG - chr7_1:73494268-73494287 Msa1037000:three_prime_UTR 25.0%
!! AAGCGGTAGTTTATATTTTT+CGG + chr7_1:73494849-73494868 None:intergenic 25.0%
! GAGAAATTCATAATAGAAGA+TGG - chr7_1:73495148-73495167 Msa1037000:CDS 25.0%
! ATAATAGAAGATGGAAAGAA+TGG - chr7_1:73495157-73495176 Msa1037000:CDS 25.0%
!! TAGTTACTTTGGATTCTATT+TGG + chr7_1:73495252-73495271 None:intergenic 25.0%
! ACATGATGAAATAGTTACTT+TGG + chr7_1:73495263-73495282 None:intergenic 25.0%
! AAAGTAACTATTTCATCATG+TGG - chr7_1:73495262-73495281 Msa1037000:CDS 25.0%
! TTCTTATAGACTTGATCAAA+TGG - chr7_1:73495648-73495667 Msa1037000:CDS 25.0%
!!! AAGGAAGTCTTTAAGAATTT+TGG - chr7_1:73495696-73495715 Msa1037000:CDS 25.0%
! GACAAAAAATCAAATGTGAA+GGG - chr7_1:73495761-73495780 Msa1037000:CDS 25.0%
!!! GATTTTCATCAGCTTTATAA+CGG + chr7_1:73494269-73494288 None:intergenic 25.0%
! GTTATAAAGCTGATGAAAAT+CGG - chr7_1:73494268-73494287 Msa1037000:three_prime_UTR 25.0%
!! AAGCGGTAGTTTATATTTTT+CGG + chr7_1:73494849-73494868 None:intergenic 25.0%
! GAGAAATTCATAATAGAAGA+TGG - chr7_1:73495148-73495167 Msa1037000:CDS 25.0%
! ATAATAGAAGATGGAAAGAA+TGG - chr7_1:73495157-73495176 Msa1037000:CDS 25.0%
!! TAGTTACTTTGGATTCTATT+TGG + chr7_1:73495252-73495271 None:intergenic 25.0%
! ACATGATGAAATAGTTACTT+TGG + chr7_1:73495263-73495282 None:intergenic 25.0%
! AAAGTAACTATTTCATCATG+TGG - chr7_1:73495262-73495281 Msa1037000:CDS 25.0%
! TTCTTATAGACTTGATCAAA+TGG - chr7_1:73495648-73495667 Msa1037000:CDS 25.0%
!!! AAGGAAGTCTTTAAGAATTT+TGG - chr7_1:73495696-73495715 Msa1037000:CDS 25.0%
! GACAAAAAATCAAATGTGAA+GGG - chr7_1:73495761-73495780 Msa1037000:CDS 25.0%
TTTCACGGTTAAACCAAAAT+GGG + chr7_1:73494160-73494179 None:intergenic 30.0%
GGATTGGATTAATGTAGAAT+TGG + chr7_1:73494480-73494499 None:intergenic 30.0%
AAAGTGATCATCCTAGAAAA+AGG - chr7_1:73494632-73494651 Msa1037000:CDS 30.0%
! CAAAATACTCTCCTTTTTCT+AGG + chr7_1:73494646-73494665 None:intergenic 30.0%
TTCTCAAGATTATTCTTCCT+TGG - chr7_1:73494667-73494686 Msa1037000:CDS 30.0%
GCTTTCAAAATCAAGTTCTT+CGG - chr7_1:73494948-73494967 Msa1037000:CDS 30.0%
AAAATCAAGTTCTTCGGAAA+GGG - chr7_1:73494954-73494973 Msa1037000:CDS 30.0%
TACAAAATCCAAACATTGGA+AGG - chr7_1:73495323-73495342 Msa1037000:CDS 30.0%
! TTAAGTGTGTCATGTTTTCA+GGG + chr7_1:73495390-73495409 None:intergenic 30.0%
TTAAGTGGTAATAACCATGA+AGG - chr7_1:73495406-73495425 Msa1037000:CDS 30.0%
!!! TTCTATAATGATTTTTGGCG+TGG + chr7_1:73495473-73495492 None:intergenic 30.0%
! GGTGCTTCTATAATGATTTT+TGG + chr7_1:73495478-73495497 None:intergenic 30.0%
ACTAATACTGAAAATGATCC+AGG + chr7_1:73495511-73495530 None:intergenic 30.0%
! CATTTTCAGTATTAGTTCCA+TGG - chr7_1:73495515-73495534 Msa1037000:CDS 30.0%
GACAGAGAAAATCTTAGAAT+TGG - chr7_1:73495670-73495689 Msa1037000:CDS 30.0%
!!! GTCTTTAAGAATTTTGGTTG+CGG - chr7_1:73495702-73495721 Msa1037000:CDS 30.0%
GGACAAAAAATCAAATGTGA+AGG - chr7_1:73495760-73495779 Msa1037000:CDS 30.0%
!! TTTAGTTCTGCACATCAAAT+GGG - chr7_1:73495868-73495887 Msa1037000:CDS 30.0%
TAGATTGAATGGTTACCATA+GGG + chr7_1:73496014-73496033 None:intergenic 30.0%
CATGATGTAACTAGTATTGT+TGG - chr7_1:73496166-73496185 Msa1037000:intron 30.0%
TCTGTCAAAGTATATTGTGT+CGG - chr7_1:73496216-73496235 Msa1037000:intron 30.0%
TTTCACGGTTAAACCAAAAT+GGG + chr7_1:73494160-73494179 None:intergenic 30.0%
GGATTGGATTAATGTAGAAT+TGG + chr7_1:73494480-73494499 None:intergenic 30.0%
AAAGTGATCATCCTAGAAAA+AGG - chr7_1:73494632-73494651 Msa1037000:CDS 30.0%
! CAAAATACTCTCCTTTTTCT+AGG + chr7_1:73494646-73494665 None:intergenic 30.0%
TTCTCAAGATTATTCTTCCT+TGG - chr7_1:73494667-73494686 Msa1037000:CDS 30.0%
GCTTTCAAAATCAAGTTCTT+CGG - chr7_1:73494948-73494967 Msa1037000:CDS 30.0%
AAAATCAAGTTCTTCGGAAA+GGG - chr7_1:73494954-73494973 Msa1037000:CDS 30.0%
TACAAAATCCAAACATTGGA+AGG - chr7_1:73495323-73495342 Msa1037000:CDS 30.0%
! TTAAGTGTGTCATGTTTTCA+GGG + chr7_1:73495390-73495409 None:intergenic 30.0%
TTAAGTGGTAATAACCATGA+AGG - chr7_1:73495406-73495425 Msa1037000:CDS 30.0%
!!! TTCTATAATGATTTTTGGCG+TGG + chr7_1:73495473-73495492 None:intergenic 30.0%
! GGTGCTTCTATAATGATTTT+TGG + chr7_1:73495478-73495497 None:intergenic 30.0%
ACTAATACTGAAAATGATCC+AGG + chr7_1:73495511-73495530 None:intergenic 30.0%
! CATTTTCAGTATTAGTTCCA+TGG - chr7_1:73495515-73495534 Msa1037000:CDS 30.0%
GACAGAGAAAATCTTAGAAT+TGG - chr7_1:73495670-73495689 Msa1037000:CDS 30.0%
!!! GTCTTTAAGAATTTTGGTTG+CGG - chr7_1:73495702-73495721 Msa1037000:CDS 30.0%
GGACAAAAAATCAAATGTGA+AGG - chr7_1:73495760-73495779 Msa1037000:CDS 30.0%
!! TTTAGTTCTGCACATCAAAT+GGG - chr7_1:73495868-73495887 Msa1037000:CDS 30.0%
TAGATTGAATGGTTACCATA+GGG + chr7_1:73496014-73496033 None:intergenic 30.0%
CATGATGTAACTAGTATTGT+TGG - chr7_1:73496166-73496185 Msa1037000:intron 30.0%
TCTGTCAAAGTATATTGTGT+CGG - chr7_1:73496216-73496235 Msa1037000:intron 30.0%
GTTTCACGGTTAAACCAAAA+TGG + chr7_1:73494161-73494180 None:intergenic 35.0%
!!! TTTTGGTTTAACCGTGAAAC+TGG - chr7_1:73494161-73494180 Msa1037000:three_prime_UTR 35.0%
TCACATGTTTACCAGTTTCA+CGG + chr7_1:73494175-73494194 None:intergenic 35.0%
TAGATGGCTATAATCCAATG+TGG - chr7_1:73494363-73494382 Msa1037000:CDS 35.0%
AAAAGTTGAAACCGAAGAAG+AGG - chr7_1:73494417-73494436 Msa1037000:CDS 35.0%
! ATGAACGAGCTTTATGAATC+AGG - chr7_1:73494701-73494720 Msa1037000:CDS 35.0%
TAATCAGAGCTTGTGAAAAG+CGG + chr7_1:73494866-73494885 None:intergenic 35.0%
CTCTGATTATCAATCTGCTA+TGG - chr7_1:73494877-73494896 Msa1037000:CDS 35.0%
TGTGACAGATAAATGCAACA+AGG - chr7_1:73494922-73494941 Msa1037000:CDS 35.0%
CAAAATCAAGTTCTTCGGAA+AGG - chr7_1:73494953-73494972 Msa1037000:CDS 35.0%
GCTTCAGAAGATCATTATTG+CGG - chr7_1:73495019-73495038 Msa1037000:CDS 35.0%
TTGTAGAACCGGAGATAAAA+AGG - chr7_1:73495057-73495076 Msa1037000:CDS 35.0%
TGTAGAACCGGAGATAAAAA+GGG - chr7_1:73495058-73495077 Msa1037000:CDS 35.0%
! TTGGTTGATGCTGTTGAAAA+CGG - chr7_1:73495097-73495116 Msa1037000:CDS 35.0%
ACAAAGAGAAAGAATTGCTC+AGG - chr7_1:73495181-73495200 Msa1037000:CDS 35.0%
AGTCCACTAGAAATCATTAG+AGG + chr7_1:73495304-73495323 None:intergenic 35.0%
GGACTACAAAATCCAAACAT+TGG - chr7_1:73495319-73495338 Msa1037000:CDS 35.0%
! CTTAAGTGTGTCATGTTTTC+AGG + chr7_1:73495391-73495410 None:intergenic 35.0%
GAAAACATGACACACTTAAG+TGG - chr7_1:73495391-73495410 Msa1037000:CDS 35.0%
AAGTTATGATTCCTCCTTCA+TGG + chr7_1:73495423-73495442 None:intergenic 35.0%
!! ATTATAGAAGCACCTGCTTT+AGG - chr7_1:73495484-73495503 Msa1037000:CDS 35.0%
ACTCGATATGAAAGACAGAA+TGG - chr7_1:73495546-73495565 Msa1037000:CDS 35.0%
! AACTGCTAACCTTTTTGCAT+TGG - chr7_1:73495582-73495601 Msa1037000:CDS 35.0%
TGTCTCTAACCAATGCAAAA+AGG + chr7_1:73495594-73495613 None:intergenic 35.0%
!! TTTGCATTGGTTAGAGACAT+AGG - chr7_1:73495595-73495614 Msa1037000:CDS 35.0%
!!! TTTAAGAATTTTGGTTGCGG+CGG - chr7_1:73495705-73495724 Msa1037000:CDS 35.0%
AGGGATCAAAGAAGAAGAAT+TGG - chr7_1:73495780-73495799 Msa1037000:CDS 35.0%
GATCAAAGAAGAAGAATTGG+AGG - chr7_1:73495783-73495802 Msa1037000:CDS 35.0%
!! GTTTAGTTCTGCACATCAAA+TGG - chr7_1:73495867-73495886 Msa1037000:CDS 35.0%
TCAAATGGGAAGTTGTAGAA+TGG - chr7_1:73495882-73495901 Msa1037000:CDS 35.0%
CAAATGGGAAGTTGTAGAAT+GGG - chr7_1:73495883-73495902 Msa1037000:CDS 35.0%
TTGATGAGAATGGAGAAAGT+TGG - chr7_1:73495929-73495948 Msa1037000:CDS 35.0%
TGATGAGAATGGAGAAAGTT+GGG - chr7_1:73495930-73495949 Msa1037000:CDS 35.0%
GTAGATTGAATGGTTACCAT+AGG + chr7_1:73496015-73496034 None:intergenic 35.0%
ACAGTATGCTGTAGATTGAA+TGG + chr7_1:73496025-73496044 None:intergenic 35.0%
GTTTCACGGTTAAACCAAAA+TGG + chr7_1:73494161-73494180 None:intergenic 35.0%
!!! TTTTGGTTTAACCGTGAAAC+TGG - chr7_1:73494161-73494180 Msa1037000:three_prime_UTR 35.0%
TCACATGTTTACCAGTTTCA+CGG + chr7_1:73494175-73494194 None:intergenic 35.0%
TAGATGGCTATAATCCAATG+TGG - chr7_1:73494363-73494382 Msa1037000:CDS 35.0%
AAAAGTTGAAACCGAAGAAG+AGG - chr7_1:73494417-73494436 Msa1037000:CDS 35.0%
! ATGAACGAGCTTTATGAATC+AGG - chr7_1:73494701-73494720 Msa1037000:CDS 35.0%
TAATCAGAGCTTGTGAAAAG+CGG + chr7_1:73494866-73494885 None:intergenic 35.0%
CTCTGATTATCAATCTGCTA+TGG - chr7_1:73494877-73494896 Msa1037000:CDS 35.0%
TGTGACAGATAAATGCAACA+AGG - chr7_1:73494922-73494941 Msa1037000:CDS 35.0%
CAAAATCAAGTTCTTCGGAA+AGG - chr7_1:73494953-73494972 Msa1037000:CDS 35.0%
GCTTCAGAAGATCATTATTG+CGG - chr7_1:73495019-73495038 Msa1037000:CDS 35.0%
TTGTAGAACCGGAGATAAAA+AGG - chr7_1:73495057-73495076 Msa1037000:CDS 35.0%
TGTAGAACCGGAGATAAAAA+GGG - chr7_1:73495058-73495077 Msa1037000:CDS 35.0%
! TTGGTTGATGCTGTTGAAAA+CGG - chr7_1:73495097-73495116 Msa1037000:CDS 35.0%
ACAAAGAGAAAGAATTGCTC+AGG - chr7_1:73495181-73495200 Msa1037000:CDS 35.0%
AGTCCACTAGAAATCATTAG+AGG + chr7_1:73495304-73495323 None:intergenic 35.0%
GGACTACAAAATCCAAACAT+TGG - chr7_1:73495319-73495338 Msa1037000:CDS 35.0%
! CTTAAGTGTGTCATGTTTTC+AGG + chr7_1:73495391-73495410 None:intergenic 35.0%
GAAAACATGACACACTTAAG+TGG - chr7_1:73495391-73495410 Msa1037000:CDS 35.0%
AAGTTATGATTCCTCCTTCA+TGG + chr7_1:73495423-73495442 None:intergenic 35.0%
!! ATTATAGAAGCACCTGCTTT+AGG - chr7_1:73495484-73495503 Msa1037000:CDS 35.0%
ACTCGATATGAAAGACAGAA+TGG - chr7_1:73495546-73495565 Msa1037000:CDS 35.0%
! AACTGCTAACCTTTTTGCAT+TGG - chr7_1:73495582-73495601 Msa1037000:CDS 35.0%
TGTCTCTAACCAATGCAAAA+AGG + chr7_1:73495594-73495613 None:intergenic 35.0%
!! TTTGCATTGGTTAGAGACAT+AGG - chr7_1:73495595-73495614 Msa1037000:CDS 35.0%
!!! TTTAAGAATTTTGGTTGCGG+CGG - chr7_1:73495705-73495724 Msa1037000:CDS 35.0%
AGGGATCAAAGAAGAAGAAT+TGG - chr7_1:73495780-73495799 Msa1037000:CDS 35.0%
GATCAAAGAAGAAGAATTGG+AGG - chr7_1:73495783-73495802 Msa1037000:CDS 35.0%
!! GTTTAGTTCTGCACATCAAA+TGG - chr7_1:73495867-73495886 Msa1037000:CDS 35.0%
TCAAATGGGAAGTTGTAGAA+TGG - chr7_1:73495882-73495901 Msa1037000:CDS 35.0%
CAAATGGGAAGTTGTAGAAT+GGG - chr7_1:73495883-73495902 Msa1037000:CDS 35.0%
TTGATGAGAATGGAGAAAGT+TGG - chr7_1:73495929-73495948 Msa1037000:CDS 35.0%
TGATGAGAATGGAGAAAGTT+GGG - chr7_1:73495930-73495949 Msa1037000:CDS 35.0%
GTAGATTGAATGGTTACCAT+AGG + chr7_1:73496015-73496034 None:intergenic 35.0%
ACAGTATGCTGTAGATTGAA+TGG + chr7_1:73496025-73496044 None:intergenic 35.0%
! TCGAAACACAGTTCCCATTT+TGG - chr7_1:73494144-73494163 Msa1037000:three_prime_UTR 40.0%
ACATCTGTCTGCAGCAATTA+GGG + chr7_1:73494344-73494363 None:intergenic 40.0%
TACATCTGTCTGCAGCAATT+AGG + chr7_1:73494345-73494364 None:intergenic 40.0%
TGGCTATAATCCAATGTGGA+AGG - chr7_1:73494367-73494386 Msa1037000:CDS 40.0%
AATCCAATGTGGAAGGCAAT+AGG - chr7_1:73494374-73494393 Msa1037000:CDS 40.0%
ATCCAATGTGGAAGGCAATA+GGG - chr7_1:73494375-73494394 Msa1037000:CDS 40.0%
TTGTCTCTATTAGTCCTTCC+TGG + chr7_1:73494448-73494467 None:intergenic 40.0%
CTTCATCTTCAGTGACTTCA+AGG + chr7_1:73494517-73494536 None:intergenic 40.0%
! AACGAGCTTTATGAATCAGG+TGG - chr7_1:73494704-73494723 Msa1037000:CDS 40.0%
! ATCATTTTACCGTCGAGAGT+TGG + chr7_1:73494737-73494756 None:intergenic 40.0%
CGACGGTAAAATGATGATCT+TGG - chr7_1:73494742-73494761 Msa1037000:CDS 40.0%
GGTAAAATGATGATCTTGGC+TGG - chr7_1:73494746-73494765 Msa1037000:CDS 40.0%
!! TGGAGGTACTGCTATAAACT+GGG - chr7_1:73494781-73494800 Msa1037000:CDS 40.0%
AACACCTGACTCTGTTAAGA+AGG - chr7_1:73494817-73494836 Msa1037000:CDS 40.0%
CATTCCTTCTTAACAGAGTC+AGG + chr7_1:73494824-73494843 None:intergenic 40.0%
CTGACTCTGTTAAGAAGGAA+TGG - chr7_1:73494822-73494841 Msa1037000:CDS 40.0%
CTATGGATTCAGTATGCAGA+AGG - chr7_1:73494894-73494913 Msa1037000:CDS 40.0%
GATTCAGTATGCAGAAGGAT+TGG - chr7_1:73494899-73494918 Msa1037000:CDS 40.0%
! GTCAGTACCCTTTTTATCTC+CGG + chr7_1:73495068-73495087 None:intergenic 40.0%
!! AAAAGGGTACTGACTCAACT+TGG - chr7_1:73495074-73495093 Msa1037000:CDS 40.0%
CCACTAGAAATCATTAGAGG+AGG + chr7_1:73495301-73495320 None:intergenic 40.0%
! CCTCCTCTAATGATTTCTAG+TGG - chr7_1:73495298-73495317 Msa1037000:CDS 40.0%
TGAAGGTTCCTTCCAATGTT+TGG + chr7_1:73495334-73495353 None:intergenic 40.0%
ATTGAACTGGATGGAGATGA+AGG + chr7_1:73495351-73495370 None:intergenic 40.0%
! TCCATCCAGTTCAATTTGCT+TGG - chr7_1:73495356-73495375 Msa1037000:CDS 40.0%
! CCATCCAGTTCAATTTGCTT+GGG - chr7_1:73495357-73495376 Msa1037000:CDS 40.0%
! CATCCAGTTCAATTTGCTTG+GGG - chr7_1:73495358-73495377 Msa1037000:CDS 40.0%
AGTGGTAATAACCATGAAGG+AGG - chr7_1:73495409-73495428 Msa1037000:CDS 40.0%
GTATTAGTTCCATGGATCTC+AGG - chr7_1:73495523-73495542 Msa1037000:CDS 40.0%
TTGGTTAGAGACATAGGATC+AGG - chr7_1:73495601-73495620 Msa1037000:CDS 40.0%
TCAGGAGAAGTAAGAAGTGA+AGG - chr7_1:73495619-73495638 Msa1037000:CDS 40.0%
!!! TTAAGAATTTTGGTTGCGGC+GGG - chr7_1:73495706-73495725 Msa1037000:CDS 40.0%
CTGTTGAGGTTGGAACTTAT+AGG - chr7_1:73495731-73495750 Msa1037000:CDS 40.0%
GTTGGAACTTATAGGAGTGA+TGG - chr7_1:73495739-73495758 Msa1037000:CDS 40.0%
GGAGTTTCTTGATACTGTCA+CGG - chr7_1:73495804-73495823 Msa1037000:CDS 40.0%
CATTGTCCAAAGTTCACTTC+TGG + chr7_1:73495848-73495867 None:intergenic 40.0%
AATGGGTGAGAATGAAGAAG+AGG - chr7_1:73495900-73495919 Msa1037000:CDS 40.0%
ATGGGTGAGAATGAAGAAGA+GGG - chr7_1:73495901-73495920 Msa1037000:CDS 40.0%
GAGAAAGTTGGGAAGCAAAA+GGG - chr7_1:73495941-73495960 Msa1037000:CDS 40.0%
AAAGGGTTGTATGTGTGTGA+TGG - chr7_1:73495958-73495977 Msa1037000:CDS 40.0%
! TCGAAACACAGTTCCCATTT+TGG - chr7_1:73494144-73494163 Msa1037000:three_prime_UTR 40.0%
ACATCTGTCTGCAGCAATTA+GGG + chr7_1:73494344-73494363 None:intergenic 40.0%
TACATCTGTCTGCAGCAATT+AGG + chr7_1:73494345-73494364 None:intergenic 40.0%
TGGCTATAATCCAATGTGGA+AGG - chr7_1:73494367-73494386 Msa1037000:CDS 40.0%
AATCCAATGTGGAAGGCAAT+AGG - chr7_1:73494374-73494393 Msa1037000:CDS 40.0%
ATCCAATGTGGAAGGCAATA+GGG - chr7_1:73494375-73494394 Msa1037000:CDS 40.0%
TTGTCTCTATTAGTCCTTCC+TGG + chr7_1:73494448-73494467 None:intergenic 40.0%
CTTCATCTTCAGTGACTTCA+AGG + chr7_1:73494517-73494536 None:intergenic 40.0%
! AACGAGCTTTATGAATCAGG+TGG - chr7_1:73494704-73494723 Msa1037000:CDS 40.0%
! ATCATTTTACCGTCGAGAGT+TGG + chr7_1:73494737-73494756 None:intergenic 40.0%
CGACGGTAAAATGATGATCT+TGG - chr7_1:73494742-73494761 Msa1037000:CDS 40.0%
GGTAAAATGATGATCTTGGC+TGG - chr7_1:73494746-73494765 Msa1037000:CDS 40.0%
!! TGGAGGTACTGCTATAAACT+GGG - chr7_1:73494781-73494800 Msa1037000:CDS 40.0%
AACACCTGACTCTGTTAAGA+AGG - chr7_1:73494817-73494836 Msa1037000:CDS 40.0%
CATTCCTTCTTAACAGAGTC+AGG + chr7_1:73494824-73494843 None:intergenic 40.0%
CTGACTCTGTTAAGAAGGAA+TGG - chr7_1:73494822-73494841 Msa1037000:CDS 40.0%
CTATGGATTCAGTATGCAGA+AGG - chr7_1:73494894-73494913 Msa1037000:CDS 40.0%
GATTCAGTATGCAGAAGGAT+TGG - chr7_1:73494899-73494918 Msa1037000:CDS 40.0%
! GTCAGTACCCTTTTTATCTC+CGG + chr7_1:73495068-73495087 None:intergenic 40.0%
!! AAAAGGGTACTGACTCAACT+TGG - chr7_1:73495074-73495093 Msa1037000:CDS 40.0%
CCACTAGAAATCATTAGAGG+AGG + chr7_1:73495301-73495320 None:intergenic 40.0%
! CCTCCTCTAATGATTTCTAG+TGG - chr7_1:73495298-73495317 Msa1037000:CDS 40.0%
TGAAGGTTCCTTCCAATGTT+TGG + chr7_1:73495334-73495353 None:intergenic 40.0%
ATTGAACTGGATGGAGATGA+AGG + chr7_1:73495351-73495370 None:intergenic 40.0%
! TCCATCCAGTTCAATTTGCT+TGG - chr7_1:73495356-73495375 Msa1037000:CDS 40.0%
! CCATCCAGTTCAATTTGCTT+GGG - chr7_1:73495357-73495376 Msa1037000:CDS 40.0%
! CATCCAGTTCAATTTGCTTG+GGG - chr7_1:73495358-73495377 Msa1037000:CDS 40.0%
AGTGGTAATAACCATGAAGG+AGG - chr7_1:73495409-73495428 Msa1037000:CDS 40.0%
GTATTAGTTCCATGGATCTC+AGG - chr7_1:73495523-73495542 Msa1037000:CDS 40.0%
TTGGTTAGAGACATAGGATC+AGG - chr7_1:73495601-73495620 Msa1037000:CDS 40.0%
TCAGGAGAAGTAAGAAGTGA+AGG - chr7_1:73495619-73495638 Msa1037000:CDS 40.0%
!!! TTAAGAATTTTGGTTGCGGC+GGG - chr7_1:73495706-73495725 Msa1037000:CDS 40.0%
CTGTTGAGGTTGGAACTTAT+AGG - chr7_1:73495731-73495750 Msa1037000:CDS 40.0%
GTTGGAACTTATAGGAGTGA+TGG - chr7_1:73495739-73495758 Msa1037000:CDS 40.0%
GGAGTTTCTTGATACTGTCA+CGG - chr7_1:73495804-73495823 Msa1037000:CDS 40.0%
CATTGTCCAAAGTTCACTTC+TGG + chr7_1:73495848-73495867 None:intergenic 40.0%
AATGGGTGAGAATGAAGAAG+AGG - chr7_1:73495900-73495919 Msa1037000:CDS 40.0%
ATGGGTGAGAATGAAGAAGA+GGG - chr7_1:73495901-73495920 Msa1037000:CDS 40.0%
GAGAAAGTTGGGAAGCAAAA+GGG - chr7_1:73495941-73495960 Msa1037000:CDS 40.0%
AAAGGGTTGTATGTGTGTGA+TGG - chr7_1:73495958-73495977 Msa1037000:CDS 40.0%
TTGCTGCAGACAGATGTAGA+TGG - chr7_1:73494347-73494366 Msa1037000:CDS 45.0%
TACCCTATTGCCTTCCACAT+TGG + chr7_1:73494380-73494399 None:intergenic 45.0%
TCTATTAGTCCTTCCTGGAG+AGG + chr7_1:73494443-73494462 None:intergenic 45.0%
ATCCAATCCCTGAGTGAGAA+AGG - chr7_1:73494491-73494510 Msa1037000:CDS 45.0%
TTCAAGGCCTTTCTCACTCA+GGG + chr7_1:73494501-73494520 None:intergenic 45.0%
AAATGCGATGCTGTCATCGT+TGG - chr7_1:73494557-73494576 Msa1037000:CDS 45.0%
GCTGCAATTCTTGCAAACTC+AGG - chr7_1:73494605-73494624 Msa1037000:CDS 45.0%
GTTCATCGCTGAACTTTCCA+AGG + chr7_1:73494687-73494706 None:intergenic 45.0%
!! GTGGAGGTACTGCTATAAAC+TGG - chr7_1:73494780-73494799 Msa1037000:CDS 45.0%
! TATTGCGGTTCGTGCTGTTA+CGG - chr7_1:73495034-73495053 Msa1037000:CDS 45.0%
TGCTGTTACGGTTGTAGAAC+CGG - chr7_1:73495046-73495065 Msa1037000:CDS 45.0%
AATTGCTCAGGAGTGATAGC+TGG - chr7_1:73495193-73495212 Msa1037000:CDS 45.0%
GAGTGATAGCTGGAACAAGT+TGG - chr7_1:73495203-73495222 Msa1037000:CDS 45.0%
! TGATAGCTGGAACAAGTTGG+AGG - chr7_1:73495206-73495225 Msa1037000:CDS 45.0%
CCCAAGCAAATTGAACTGGA+TGG + chr7_1:73495360-73495379 None:intergenic 45.0%
TAGCCCCAAGCAAATTGAAC+TGG + chr7_1:73495364-73495383 None:intergenic 45.0%
AATGATCCAGGTCCTAAAGC+AGG + chr7_1:73495499-73495518 None:intergenic 45.0%
ATATCGAGTCCTGAGATCCA+TGG + chr7_1:73495535-73495554 None:intergenic 45.0%
CTTGATACTGTCACGGTTGT+CGG - chr7_1:73495811-73495830 Msa1037000:CDS 45.0%
GGAGAAAGTTGGGAAGCAAA+AGG - chr7_1:73495940-73495959 Msa1037000:CDS 45.0%
! AGTGTTTTGCCTAGTGCAGT+TGG - chr7_1:73495982-73496001 Msa1037000:CDS 45.0%
!! TGCAGTTGGTGTTAACCCTA+TGG - chr7_1:73495996-73496015 Msa1037000:CDS 45.0%
TGTGTCGGACTAACTAGCAA+TGG - chr7_1:73496231-73496250 Msa1037000:CDS 45.0%
TTGCTGCAGACAGATGTAGA+TGG - chr7_1:73494347-73494366 Msa1037000:CDS 45.0%
TACCCTATTGCCTTCCACAT+TGG + chr7_1:73494380-73494399 None:intergenic 45.0%
TCTATTAGTCCTTCCTGGAG+AGG + chr7_1:73494443-73494462 None:intergenic 45.0%
ATCCAATCCCTGAGTGAGAA+AGG - chr7_1:73494491-73494510 Msa1037000:CDS 45.0%
TTCAAGGCCTTTCTCACTCA+GGG + chr7_1:73494501-73494520 None:intergenic 45.0%
AAATGCGATGCTGTCATCGT+TGG - chr7_1:73494557-73494576 Msa1037000:CDS 45.0%
GCTGCAATTCTTGCAAACTC+AGG - chr7_1:73494605-73494624 Msa1037000:CDS 45.0%
GTTCATCGCTGAACTTTCCA+AGG + chr7_1:73494687-73494706 None:intergenic 45.0%
!! GTGGAGGTACTGCTATAAAC+TGG - chr7_1:73494780-73494799 Msa1037000:CDS 45.0%
! TATTGCGGTTCGTGCTGTTA+CGG - chr7_1:73495034-73495053 Msa1037000:CDS 45.0%
TGCTGTTACGGTTGTAGAAC+CGG - chr7_1:73495046-73495065 Msa1037000:CDS 45.0%
AATTGCTCAGGAGTGATAGC+TGG - chr7_1:73495193-73495212 Msa1037000:CDS 45.0%
GAGTGATAGCTGGAACAAGT+TGG - chr7_1:73495203-73495222 Msa1037000:CDS 45.0%
! TGATAGCTGGAACAAGTTGG+AGG - chr7_1:73495206-73495225 Msa1037000:CDS 45.0%
CCCAAGCAAATTGAACTGGA+TGG + chr7_1:73495360-73495379 None:intergenic 45.0%
TAGCCCCAAGCAAATTGAAC+TGG + chr7_1:73495364-73495383 None:intergenic 45.0%
AATGATCCAGGTCCTAAAGC+AGG + chr7_1:73495499-73495518 None:intergenic 45.0%
ATATCGAGTCCTGAGATCCA+TGG + chr7_1:73495535-73495554 None:intergenic 45.0%
CTTGATACTGTCACGGTTGT+CGG - chr7_1:73495811-73495830 Msa1037000:CDS 45.0%
GGAGAAAGTTGGGAAGCAAA+AGG - chr7_1:73495940-73495959 Msa1037000:CDS 45.0%
! AGTGTTTTGCCTAGTGCAGT+TGG - chr7_1:73495982-73496001 Msa1037000:CDS 45.0%
!! TGCAGTTGGTGTTAACCCTA+TGG - chr7_1:73495996-73496015 Msa1037000:CDS 45.0%
TGTGTCGGACTAACTAGCAA+TGG - chr7_1:73496231-73496250 Msa1037000:CDS 45.0%
GTGGAAGGCAATAGGGTACA+AGG - chr7_1:73494382-73494401 Msa1037000:CDS 50.0%
GAAGGCAATAGGGTACAAGG+TGG - chr7_1:73494385-73494404 Msa1037000:CDS 50.0%
CTTCAAGGCCTTTCTCACTC+AGG + chr7_1:73494502-73494521 None:intergenic 50.0%
!! GATGCTGTCATCGTTGGTTC+CGG - chr7_1:73494563-73494582 Msa1037000:CDS 50.0%
GGAATCATGCCAACTCTCGA+CGG - chr7_1:73494725-73494744 Msa1037000:CDS 50.0%
! ATCTTGGCTGGCTCAACAGT+CGG - chr7_1:73494758-73494777 Msa1037000:CDS 50.0%
! CGGAAAGGGTGTGAGAGAAT+TGG - chr7_1:73494968-73494987 Msa1037000:CDS 50.0%
!! GGGTACTGACTCAACTTGGT+TGG - chr7_1:73495078-73495097 Msa1037000:CDS 50.0%
TCTCAGCTCTACATCCAGTG+AGG + chr7_1:73495132-73495151 None:intergenic 50.0%
CAAAGTTCACTTCTGGACCG+CGG + chr7_1:73495841-73495860 None:intergenic 50.0%
!! GAGGGTGCAGTTGATGAGAA+TGG - chr7_1:73495919-73495938 Msa1037000:CDS 50.0%
GGGTTAACACCAACTGCACT+AGG + chr7_1:73495994-73496013 None:intergenic 50.0%
GTGGAAGGCAATAGGGTACA+AGG - chr7_1:73494382-73494401 Msa1037000:CDS 50.0%
GAAGGCAATAGGGTACAAGG+TGG - chr7_1:73494385-73494404 Msa1037000:CDS 50.0%
CTTCAAGGCCTTTCTCACTC+AGG + chr7_1:73494502-73494521 None:intergenic 50.0%
!! GATGCTGTCATCGTTGGTTC+CGG - chr7_1:73494563-73494582 Msa1037000:CDS 50.0%
GGAATCATGCCAACTCTCGA+CGG - chr7_1:73494725-73494744 Msa1037000:CDS 50.0%
! ATCTTGGCTGGCTCAACAGT+CGG - chr7_1:73494758-73494777 Msa1037000:CDS 50.0%
! CGGAAAGGGTGTGAGAGAAT+TGG - chr7_1:73494968-73494987 Msa1037000:CDS 50.0%
!! GGGTACTGACTCAACTTGGT+TGG - chr7_1:73495078-73495097 Msa1037000:CDS 50.0%
TCTCAGCTCTACATCCAGTG+AGG + chr7_1:73495132-73495151 None:intergenic 50.0%
CAAAGTTCACTTCTGGACCG+CGG + chr7_1:73495841-73495860 None:intergenic 50.0%
!! GAGGGTGCAGTTGATGAGAA+TGG - chr7_1:73495919-73495938 Msa1037000:CDS 50.0%
GGGTTAACACCAACTGCACT+AGG + chr7_1:73495994-73496013 None:intergenic 50.0%
TCCTGGAGAGGCCTCTTCTT+CGG + chr7_1:73494431-73494450 None:intergenic 55.0%
AAGAAGAGGCCTCTCCAGGA+AGG - chr7_1:73494431-73494450 Msa1037000:CDS 55.0%
GGCCTTTCTCACTCAGGGAT+TGG + chr7_1:73494496-73494515 None:intergenic 55.0%
!! GTCATCGTTGGTTCCGGTAG+CGG - chr7_1:73494569-73494588 Msa1037000:CDS 55.0%
AACGGCGCAGTTATCCTCAC+TGG - chr7_1:73495115-73495134 Msa1037000:CDS 55.0%
!! GAAGCACCTGCTTTAGGACC+TGG - chr7_1:73495490-73495509 Msa1037000:CDS 55.0%
GATACTGTCACGGTTGTCGG+TGG - chr7_1:73495814-73495833 Msa1037000:CDS 55.0%
CGCGGTCCAGAAGTGAACTT+TGG - chr7_1:73495839-73495858 Msa1037000:CDS 55.0%
TCCTGGAGAGGCCTCTTCTT+CGG + chr7_1:73494431-73494450 None:intergenic 55.0%
AAGAAGAGGCCTCTCCAGGA+AGG - chr7_1:73494431-73494450 Msa1037000:CDS 55.0%
GGCCTTTCTCACTCAGGGAT+TGG + chr7_1:73494496-73494515 None:intergenic 55.0%
!! GTCATCGTTGGTTCCGGTAG+CGG - chr7_1:73494569-73494588 Msa1037000:CDS 55.0%
AACGGCGCAGTTATCCTCAC+TGG - chr7_1:73495115-73495134 Msa1037000:CDS 55.0%
!! GAAGCACCTGCTTTAGGACC+TGG - chr7_1:73495490-73495509 Msa1037000:CDS 55.0%
GATACTGTCACGGTTGTCGG+TGG - chr7_1:73495814-73495833 Msa1037000:CDS 55.0%
CGCGGTCCAGAAGTGAACTT+TGG - chr7_1:73495839-73495858 Msa1037000:CDS 55.0%
ACCGAAGAAGAGGCCTCTCC+AGG - chr7_1:73494427-73494446 Msa1037000:CDS 60.0%
!! ATCGTTGGTTCCGGTAGCGG+TGG - chr7_1:73494572-73494591 Msa1037000:CDS 60.0%
TGCAACTCCTCCACCGCTAC+CGG + chr7_1:73494585-73494604 None:intergenic 60.0%
! TTGGCTGGCTCAACAGTCGG+TGG - chr7_1:73494761-73494780 Msa1037000:CDS 60.0%
ACCGAAGAAGAGGCCTCTCC+AGG - chr7_1:73494427-73494446 Msa1037000:CDS 60.0%
!! ATCGTTGGTTCCGGTAGCGG+TGG - chr7_1:73494572-73494591 Msa1037000:CDS 60.0%
TGCAACTCCTCCACCGCTAC+CGG + chr7_1:73494585-73494604 None:intergenic 60.0%
! TTGGCTGGCTCAACAGTCGG+TGG - chr7_1:73494761-73494780 Msa1037000:CDS 60.0%
! GTTGGTTCCGGTAGCGGTGG+AGG - chr7_1:73494575-73494594 Msa1037000:CDS 65.0%
! GCTGGCTCAACAGTCGGTGG+AGG - chr7_1:73494764-73494783 Msa1037000:CDS 65.0%
TCACGGTTGTCGGTGGACCG+CGG - chr7_1:73495821-73495840 Msa1037000:CDS 65.0%
! GTTGGTTCCGGTAGCGGTGG+AGG - chr7_1:73494575-73494594 Msa1037000:CDS 65.0%
! GCTGGCTCAACAGTCGGTGG+AGG - chr7_1:73494764-73494783 Msa1037000:CDS 65.0%
TCACGGTTGTCGGTGGACCG+CGG - chr7_1:73495821-73495840 Msa1037000:CDS 65.0%
GGTTGCGGCGGGAGCTGTTG+AGG - chr7_1:73495717-73495736 Msa1037000:CDS 70.0%
GCGGCGGGAGCTGTTGAGGT+TGG - chr7_1:73495721-73495740 Msa1037000:CDS 70.0%
GGTTGCGGCGGGAGCTGTTG+AGG - chr7_1:73495717-73495736 Msa1037000:CDS 70.0%
GCGGCGGGAGCTGTTGAGGT+TGG - chr7_1:73495721-73495740 Msa1037000:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 73494126 73496275 73494126 ID=Msa1037000;Name=Msa1037000
chr7_1 mRNA 73494126 73496275 73494126 ID=Msa1037000-mRNA-1;Parent=Msa1037000;Name=Msa1037000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0.5|0.5|1|1|2|192|594
chr7_1 exon 73494126 73496045 73494126 ID=Msa1037000-mRNA-1:exon:18146;Parent=Msa1037000-mRNA-1
chr7_1 exon 73496219 73496275 73496219 ID=Msa1037000-mRNA-1:exon:18145;Parent=Msa1037000-mRNA-1
chr7_1 CDS 73496219 73496275 73496219 ID=Msa1037000-mRNA-1:cds;Parent=Msa1037000-mRNA-1
chr7_1 CDS 73494318 73496045 73494318 ID=Msa1037000-mRNA-1:cds;Parent=Msa1037000-mRNA-1
chr7_1 three_prime_UTR 73494126 73494317 73494126 ID=Msa1037000-mRNA-1:three_prime_utr;Parent=Msa1037000-mRNA-1
Gene Sequence

>Msa1037000

ATGAGATATGTTCGAAAATCGAAACACAGTTCCCATTTTGGTTTAACCGTGAAACTGACAGATGTAGATGGCTATAATCCAATGTGGAAGGCAATAGGGTACAAGGTGGACACTAGAGAAAAGTTGAAACCGAAGAAGAGGCCTCTCCAGGAAGGACTAATAGAGACAACATACGAAACCAATTCTACATTAATCCAATCCCTGAGTGAGAAAGGCCTTGAAGTCACTGAAGATGAAGAGCAGAACGTGTACAAGATCAAATGCGATGCTGTCATCGTTGGTTCCGGTAGCGGTGGAGGAGTTGCAGCTGCAATTCTTGCAAACTCAGGTCATAAAGTGATCATCCTAGAAAAAGGAGAGTATTTTGTTTCTCAAGATTATTCTTCCTTGGAAAGTTCAGCGATGAACGAGCTTTATGAATCAGGTGGAATCATGCCAACTCTCGACGGTAAAATGATGATCTTGGCTGGCTCAACAGTCGGTGGAGGTACTGCTATAAACTGGGCTGCTTGTGTTAGAACACCTGACTCTGTTAAGAAGGAATGGTCCGAAAAATATAAACTACCGCTTTTCACAAGCTCTGATTATCAATCTGCTATGGATTCAGTATGCAGAAGGATTGGTGTGACAGATAAATGCAACAAGGAAAGCTTTCAAAATCAAGTTCTTCGGAAAGGGTGTGAGAGAATTGGTTTAAAAGTCGAATCAGTTGCAGTGAATGCTTCAGAAGATCATTATTGCGGTTCGTGCTGTTACGGTTGTAGAACCGGAGATAAAAAGGGTACTGACTCAACTTGGTTGGTTGATGCTGTTGAAAACGGCGCAGTTATCCTCACTGGATGTAGAGCTGAGAAATTCATAATAGAAGATGGAAAGAATGGAACAAAGAGAAAGAATTGCTCAGGAGTGATAGCTGGAACAAGTTGGAGGAGTACGATTACAAAGAAACTCCAAATAGAATCCAAAGTAACTATTTCATCATGTGGATCACTACTTACACCTCCTCTAATGATTTCTAGTGGACTACAAAATCCAAACATTGGAAGGAACCTTCATCTCCATCCAGTTCAATTTGCTTGGGGCTATTTCCCTGAAAACATGACACACTTAAGTGGTAATAACCATGAAGGAGGAATCATAACTTCTATACACAAAGTACTTGCTGAGAACTCCACGCCAAAAATCATTATAGAAGCACCTGCTTTAGGACCTGGATCATTTTCAGTATTAGTTCCATGGATCTCAGGACTCGATATGAAAGACAGAATGGCGAAATATGCAAGAACTGCTAACCTTTTTGCATTGGTTAGAGACATAGGATCAGGAGAAGTAAGAAGTGAAGGAAGAATTTCTTATAGACTTGATCAAATGGACAGAGAAAATCTTAGAATTGGATTAAGGAAGTCTTTAAGAATTTTGGTTGCGGCGGGAGCTGTTGAGGTTGGAACTTATAGGAGTGATGGACAAAAAATCAAATGTGAAGGGATCAAAGAAGAAGAATTGGAGGAGTTTCTTGATACTGTCACGGTTGTCGGTGGACCGCGGTCCAGAAGTGAACTTTGGACAATGTTTAGTTCTGCACATCAAATGGGAAGTTGTAGAATGGGTGAGAATGAAGAAGAGGGTGCAGTTGATGAGAATGGAGAAAGTTGGGAAGCAAAAGGGTTGTATGTGTGTGATGGAAGTGTTTTGCCTAGTGCAGTTGGTGTTAACCCTATGGTAACCATTCAATCTACAGCATACTGTATTGCTAGTAAAATTGCAGAATCACTTAAGAATAGATAG

Protein sequence

>Msa1037000

MRYVRKSKHSSHFGLTVKLTDVDGYNPMWKAIGYKVDTREKLKPKKRPLQEGLIETTYETNSTLIQSLSEKGLEVTEDEEQNVYKIKCDAVIVGSGSGGGVAAAILANSGHKVIILEKGEYFVSQDYSSLESSAMNELYESGGIMPTLDGKMMILAGSTVGGGTAINWAACVRTPDSVKKEWSEKYKLPLFTSSDYQSAMDSVCRRIGVTDKCNKESFQNQVLRKGCERIGLKVESVAVNASEDHYCGSCCYGCRTGDKKGTDSTWLVDAVENGAVILTGCRAEKFIIEDGKNGTKRKNCSGVIAGTSWRSTITKKLQIESKVTISSCGSLLTPPLMISSGLQNPNIGRNLHLHPVQFAWGYFPENMTHLSGNNHEGGIITSIHKVLAENSTPKIIIEAPALGPGSFSVLVPWISGLDMKDRMAKYARTANLFALVRDIGSGEVRSEGRISYRLDQMDRENLRIGLRKSLRILVAAGAVEVGTYRSDGQKIKCEGIKEEELEEFLDTVTVVGGPRSRSELWTMFSSAHQMGSCRMGENEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMVTIQSTAYCIASKIAESLKNR*