AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1414830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1414830 MtrunA17_Chr1g0178481 96.446 619 18 2 1 616 1 618 0.0 1223
Msa1414830 MtrunA17_Chr4g0061601 33.200 500 309 8 109 595 117 604 4.40e-70 238
Msa1414830 MtrunA17_Chr6g0452061 30.769 520 323 11 108 613 262 758 2.63e-66 231
Msa1414830 MtrunA17_Chr6g0452061 51.807 83 40 0 514 596 17 99 4.03e-18 88.6
Msa1414830 MtrunA17_Chr6g0452111 30.418 526 324 11 108 613 744 1247 4.93e-64 229
Msa1414830 MtrunA17_Chr6g0452111 41.045 268 151 3 348 612 338 601 5.90e-50 187
Msa1414830 MtrunA17_Chr6g0452141 30.508 531 325 10 104 613 739 1246 1.12e-63 228
Msa1414830 MtrunA17_Chr6g0452141 42.164 268 148 3 348 612 332 595 1.06e-50 189
Msa1414830 MtrunA17_Chr6g0452171 30.224 536 320 12 104 613 742 1249 1.06e-61 222
Msa1414830 MtrunA17_Chr6g0452171 41.418 268 150 3 348 612 331 594 9.55e-51 189
Msa1414830 MtrunA17_Chr6g0451911 30.052 579 355 11 55 613 695 1243 4.02e-61 220
Msa1414830 MtrunA17_Chr6g0451911 42.164 268 148 3 348 612 331 594 9.98e-51 189
Msa1414830 MtrunA17_Chr6g0452041 30.451 532 326 10 103 613 740 1248 9.56e-61 219
Msa1414830 MtrunA17_Chr6g0452041 41.045 268 151 3 348 612 331 594 2.26e-49 185
Msa1414830 MtrunA17_Chr1g0156821 33.333 495 279 13 135 602 747 1217 1.13e-59 216
Msa1414830 MtrunA17_Chr1g0156821 41.991 231 128 2 367 595 362 588 1.04e-44 171
Msa1414830 MtrunA17_Chr6g0452071 38.658 313 178 5 307 613 138 442 3.82e-59 204
Msa1414830 MtrunA17_Chr3g0123411 32.383 491 293 13 135 603 657 1130 6.05e-59 214
Msa1414830 MtrunA17_Chr3g0123411 30.169 474 309 9 135 595 1 465 6.83e-46 175
Msa1414830 MtrunA17_Chr6g0451881 31.238 509 289 15 135 613 759 1236 8.92e-59 213
Msa1414830 MtrunA17_Chr6g0451881 42.231 251 138 3 348 595 331 577 7.60e-50 187
Msa1414830 MtrunA17_Chr7g0227391 31.846 493 280 14 132 595 178 643 1.05e-58 208
Msa1414830 MtrunA17_Chr5g0412741 31.800 500 312 13 127 613 204 687 4.90e-58 207
Msa1414830 MtrunA17_Chr2g0285191 31.478 521 329 11 108 612 779 1287 6.12e-58 211
Msa1414830 MtrunA17_Chr2g0285191 29.461 482 300 11 135 595 152 614 7.43e-53 196
Msa1414830 MtrunA17_Chr4g0041871 31.753 485 287 15 135 595 758 1222 3.39e-57 209
Msa1414830 MtrunA17_Chr4g0041871 29.835 486 296 12 135 595 94 559 1.47e-49 186
Msa1414830 MtrunA17_Chr7g0264631 30.134 521 339 13 104 609 802 1312 2.96e-56 206
Msa1414830 MtrunA17_Chr7g0264631 30.000 500 307 14 134 614 179 654 1.35e-54 201
Msa1414830 MtrunA17_Chr7g0233901 29.528 508 324 9 109 596 722 1215 1.97e-55 203
Msa1414830 MtrunA17_Chr7g0233901 41.870 246 127 5 371 612 350 583 5.11e-48 181
Msa1414830 MtrunA17_Chr5g0433051 33.902 469 270 16 161 602 233 688 6.43e-55 198
Msa1414830 MtrunA17_Chr6g0474071 32.134 417 226 7 233 596 20 432 7.58e-55 193
Msa1414830 MtrunA17_Chr3g0119381 29.449 472 298 10 143 595 160 615 8.19e-55 201
Msa1414830 MtrunA17_Chr3g0119381 41.825 263 142 5 359 614 1038 1296 4.80e-48 181
Msa1414830 MtrunA17_Chr1g0180601 42.066 271 139 5 351 614 368 627 1.13e-54 201
Msa1414830 MtrunA17_Chr1g0180601 40.441 272 149 7 347 609 1019 1286 7.46e-53 196
Msa1414830 MtrunA17_Chr4g0069351 31.213 503 301 11 132 613 786 1264 1.48e-54 201
Msa1414830 MtrunA17_Chr4g0069351 44.262 244 120 6 363 595 356 594 7.09e-53 196
Msa1414830 MtrunA17_Chr2g0285301 30.920 511 325 11 108 602 747 1245 1.91e-54 200
Msa1414830 MtrunA17_Chr2g0285301 28.313 498 330 11 115 595 93 580 1.92e-54 200
Msa1414830 MtrunA17_Chr6g0481921 28.875 471 317 9 135 595 25 487 6.18e-54 199
Msa1414830 MtrunA17_Chr6g0481921 28.843 527 336 11 108 616 653 1158 2.23e-51 191
Msa1414830 MtrunA17_Chr2g0285311 28.195 493 332 10 115 595 103 585 7.64e-54 199
Msa1414830 MtrunA17_Chr2g0285311 29.775 534 321 15 108 612 751 1259 1.62e-51 192
Msa1414830 MtrunA17_Chr5g0433071 34.318 440 268 10 173 602 262 690 8.25e-54 195
Msa1414830 MtrunA17_Chr5g0410921 41.137 299 163 8 304 595 913 1205 2.85e-53 197
Msa1414830 MtrunA17_Chr5g0410921 28.729 543 357 11 66 595 47 572 3.97e-51 191
Msa1414830 MtrunA17_Chr1g0193991 43.348 233 125 4 366 595 377 605 1.46e-52 195
Msa1414830 MtrunA17_Chr1g0193991 41.065 263 148 4 347 603 1009 1270 9.91e-48 180
Msa1414830 MtrunA17_Chr6g0453051 31.323 514 309 15 109 596 91 586 3.02e-52 194
Msa1414830 MtrunA17_Chr6g0453051 29.132 484 330 8 120 595 746 1224 1.99e-50 188
Msa1414830 MtrunA17_Chr1g0194031 43.290 231 124 4 366 593 372 598 3.81e-52 192
Msa1414830 MtrunA17_Chr1g0194001 42.205 263 145 4 347 603 112 373 7.06e-52 182
Msa1414830 MtrunA17_Chr4g0069361 30.952 504 301 13 132 613 786 1264 8.52e-52 192
Msa1414830 MtrunA17_Chr4g0069361 43.697 238 120 5 367 595 362 594 9.35e-52 192
Msa1414830 MtrunA17_Chr4g0069401 29.350 477 307 12 135 595 127 589 3.29e-51 191
Msa1414830 MtrunA17_Chr4g0069401 30.159 504 305 13 132 613 784 1262 1.95e-49 186
Msa1414830 MtrunA17_Chr6g0486841 31.489 524 320 15 109 609 86 593 2.15e-50 188
Msa1414830 MtrunA17_Chr6g0486841 29.637 496 284 12 135 595 753 1218 7.39e-48 181
Msa1414830 MtrunA17_Chr4g0069411 42.683 246 137 3 359 602 1031 1274 4.44e-50 187
Msa1414830 MtrunA17_Chr4g0069411 36.393 305 176 8 301 595 316 612 2.66e-47 179
Msa1414830 MtrunA17_Chr3g0138211 41.365 249 135 5 354 595 368 612 6.90e-50 187
Msa1414830 MtrunA17_Chr3g0138211 28.797 507 308 13 132 603 776 1264 3.28e-48 182
Msa1414830 MtrunA17_Chr6g0452081 41.597 238 128 4 352 586 1 230 7.42e-50 172
Msa1414830 MtrunA17_Chr4g0039821 40.590 271 146 5 349 613 1001 1262 5.00e-49 184
Msa1414830 MtrunA17_Chr4g0039821 43.231 229 121 4 371 595 369 592 5.07e-48 181
Msa1414830 MtrunA17_Chr8g0344651 28.850 513 319 15 108 596 325 815 8.17e-48 181
Msa1414830 MtrunA17_Chr8g0344651 27.392 533 327 13 108 612 968 1468 1.84e-43 167
Msa1414830 MtrunA17_Chr3g0128381 39.216 255 144 5 350 595 362 614 2.02e-47 176
Msa1414830 MtrunA17_Chr8g0366481 38.796 299 170 6 304 595 310 602 8.74e-47 174
Msa1414830 MtrunA17_Chr3g0128391 27.222 540 311 10 127 595 3 531 1.62e-44 167
Msa1414830 MtrunA17_Chr7g0222781 34.228 298 186 5 304 596 330 622 9.45e-43 165
Msa1414830 MtrunA17_Chr7g0222781 27.048 525 342 15 106 611 879 1381 1.40e-37 150
Msa1414830 MtrunA17_Chr1g0212701 31.172 401 230 10 226 613 259 626 3.68e-42 164
Msa1414830 MtrunA17_Chr1g0212701 26.459 514 349 11 111 611 876 1373 4.55e-37 148
Msa1414830 MtrunA17_Chr1g0183191 25.239 523 348 13 93 596 1001 1499 8.31e-38 150
Msa1414830 MtrunA17_Chr1g0183191 31.222 221 126 5 395 613 661 857 1.03e-19 94.4
Msa1414830 MtrunA17_Chr6g0463181 25.106 470 327 9 155 610 983 1441 2.12e-37 149
Msa1414830 MtrunA17_Chr6g0463181 30.837 227 138 5 378 602 609 818 1.14e-20 97.1
Msa1414830 MtrunA17_Chr6g0463141 31.873 251 162 3 351 595 1220 1467 4.77e-36 145
Msa1414830 MtrunA17_Chr6g0463141 23.444 482 287 15 158 591 397 844 5.59e-18 88.6
Msa1414830 MtrunA17_Chr6g0472531 32.331 266 171 4 351 610 1146 1408 6.09e-36 145
Msa1414830 MtrunA17_Chr6g0472531 30.415 217 133 4 378 593 573 772 1.26e-21 100
Msa1414830 MtrunA17_Chr7g0262191 31.349 252 164 2 351 596 1251 1499 6.96e-36 144
Msa1414830 MtrunA17_Chr7g0262191 30.962 239 138 6 377 613 640 853 4.45e-20 95.5
Msa1414830 MtrunA17_Chr6g0463121 32.911 237 156 2 374 610 1224 1457 8.73e-36 144
Msa1414830 MtrunA17_Chr6g0463121 30.932 236 139 6 361 593 607 821 1.29e-23 106
Msa1414830 MtrunA17_Chr5g0412941 30.502 259 170 3 351 602 51 306 2.59e-35 135
Msa1414830 MtrunA17_Chr8g0359291 24.255 470 331 9 155 610 181 639 4.28e-35 140
Msa1414830 MtrunA17_Chr8g0363771 31.718 227 152 1 376 602 1256 1479 1.11e-34 141
Msa1414830 MtrunA17_Chr8g0363771 24.850 334 210 10 295 613 543 850 3.45e-19 92.4
Msa1414830 MtrunA17_Chr2g0295921 30.350 257 171 3 351 602 1241 1494 1.39e-34 140
Msa1414830 MtrunA17_Chr2g0295921 26.389 216 135 4 399 613 675 867 7.07e-18 88.2
Msa1414830 MtrunA17_Chr6g0463201 33.636 220 142 2 376 595 1232 1447 3.17e-34 139
Msa1414830 MtrunA17_Chr6g0463201 30.396 227 139 5 378 602 627 836 5.82e-21 98.2
Msa1414830 MtrunA17_Chr6g0463151 32.489 237 157 2 374 610 1042 1275 3.41e-34 139
Msa1414830 MtrunA17_Chr6g0463151 27.897 233 146 5 361 591 425 637 3.03e-19 92.4
Msa1414830 MtrunA17_Chr6g0463131 33.043 230 149 3 374 601 1225 1451 4.42e-34 139
Msa1414830 MtrunA17_Chr6g0463131 26.316 304 190 8 309 595 538 824 2.95e-21 99.0
Msa1414830 MtrunA17_Chr2g0295901 32.468 231 152 2 376 605 1256 1483 4.91e-34 139
Msa1414830 MtrunA17_Chr2g0295901 25.526 333 209 9 297 613 546 855 8.77e-20 94.4
Msa1414830 MtrunA17_Chr2g0295911 32.159 227 151 1 376 602 1259 1482 7.63e-34 138
Msa1414830 MtrunA17_Chr2g0295911 27.315 216 133 4 399 613 663 855 1.17e-18 90.9
Msa1414830 MtrunA17_Chr5g0445741 24.408 549 331 16 94 602 968 1472 7.76e-34 138
Msa1414830 MtrunA17_Chr5g0445741 25.000 308 207 7 296 595 542 833 1.12e-19 94.0
Msa1414830 MtrunA17_Chr8g0341851 32.599 227 150 1 376 602 1218 1441 3.47e-33 136
Msa1414830 MtrunA17_Chr8g0341851 23.834 579 358 20 72 609 298 834 3.48e-26 114
Msa1414830 MtrunA17_Chr5g0412721 32.479 234 153 3 362 595 1232 1460 3.53e-33 136
Msa1414830 MtrunA17_Chr5g0412721 24.922 321 198 7 296 595 524 822 1.56e-20 96.7
Msa1414830 MtrunA17_Chr5g0445671 31.950 241 159 3 362 602 846 1081 5.12e-33 135
Msa1414830 MtrunA17_Chr5g0445671 25.000 308 207 7 296 595 151 442 2.73e-19 92.8
Msa1414830 MtrunA17_Chr3g0101471 31.624 234 155 3 362 595 1046 1274 1.10e-32 134
Msa1414830 MtrunA17_Chr3g0101471 26.364 330 212 8 292 613 338 644 4.07e-22 101
Msa1414830 MtrunA17_Chr2g0285731 32.669 251 160 2 351 595 1204 1451 1.18e-32 134
Msa1414830 MtrunA17_Chr2g0285731 32.195 205 117 4 395 595 633 819 1.09e-21 100
Msa1414830 MtrunA17_Chr8g0376961 32.456 228 149 3 376 602 1196 1419 1.82e-32 134
Msa1414830 MtrunA17_Chr8g0376961 25.081 307 207 7 300 598 503 794 1.31e-17 87.4
Msa1414830 MtrunA17_Chr3g0101441 31.197 234 156 3 362 595 1048 1276 2.01e-32 134
Msa1414830 MtrunA17_Chr3g0101441 25.758 330 214 8 292 613 340 646 5.90e-21 98.2
Msa1414830 MtrunA17_Chr3g0101461 32.051 234 154 3 362 595 1048 1276 2.52e-32 133
Msa1414830 MtrunA17_Chr3g0101461 25.152 330 216 8 292 613 340 646 1.78e-21 99.8
Msa1414830 MtrunA17_Chr8g0337121 28.195 266 182 2 351 610 1226 1488 5.59e-32 132
Msa1414830 MtrunA17_Chr8g0337121 25.072 347 216 11 261 595 516 830 3.40e-19 92.4
Msa1414830 MtrunA17_Chr1g0202221 31.081 222 150 1 374 595 1131 1349 5.90e-32 132
Msa1414830 MtrunA17_Chr1g0202221 23.489 579 379 19 56 607 294 835 4.41e-21 98.6
Msa1414830 MtrunA17_Chr6g0463391 32.273 220 145 2 376 595 412 627 5.91e-32 131
Msa1414830 MtrunA17_Chr8g0337191 23.576 632 438 15 3 610 858 1468 6.13e-32 132
Msa1414830 MtrunA17_Chr8g0337191 25.292 257 165 7 347 595 573 810 6.04e-17 85.1
Msa1414830 MtrunA17_Chr5g0445701 33.333 201 131 1 386 586 4 201 6.70e-32 124
Msa1414830 MtrunA17_Chr6g0463211 31.818 220 146 2 376 595 1298 1513 1.30e-31 131
Msa1414830 MtrunA17_Chr6g0463211 25.743 303 191 6 310 595 576 861 3.82e-21 98.6
Msa1414830 MtrunA17_Chr3g0085281 27.059 340 217 9 268 595 1115 1435 1.71e-31 131
Msa1414830 MtrunA17_Chr3g0085281 24.918 305 206 6 300 595 507 797 4.35e-18 89.0
Msa1414830 MtrunA17_Chr3g0080981 24.731 558 367 13 71 595 911 1448 3.77e-31 130
Msa1414830 MtrunA17_Chr3g0080981 22.986 422 278 13 206 613 443 831 4.92e-19 92.0
Msa1414830 MtrunA17_Chr6g0471281 31.955 266 172 4 351 610 1196 1458 8.25e-31 129
Msa1414830 MtrunA17_Chr6g0471281 26.316 323 203 8 303 607 532 837 7.88e-21 97.8
Msa1414830 MtrunA17_Chr8g0353541 28.682 258 175 2 351 602 795 1049 8.45e-31 129
Msa1414830 MtrunA17_Chr8g0353541 29.091 220 132 4 395 613 226 422 3.18e-19 92.4
Msa1414830 MtrunA17_Chr8g0341751 31.278 227 153 1 376 602 1042 1265 1.56e-30 128
Msa1414830 MtrunA17_Chr8g0341751 29.864 221 129 5 395 613 442 638 1.13e-20 97.1
Msa1414830 MtrunA17_Chr3g0101481 30.943 265 160 6 351 602 1222 1476 1.92e-30 127
Msa1414830 MtrunA17_Chr3g0101481 25.625 320 206 7 301 613 544 838 1.57e-19 93.6
Msa1414830 MtrunA17_Chr8g0353781 30.837 227 154 1 376 602 1209 1432 3.94e-30 127
Msa1414830 MtrunA17_Chr8g0353781 23.743 358 236 10 263 613 486 813 3.81e-22 102
Msa1414830 MtrunA17_Chr8g0341761 30.837 227 154 1 376 602 1203 1426 1.20e-29 125
Msa1414830 MtrunA17_Chr8g0341761 23.708 329 216 8 290 613 512 810 3.29e-20 95.9
Msa1414830 MtrunA17_Chr2g0333911 31.933 238 151 3 376 613 772 998 1.98e-29 124
Msa1414830 MtrunA17_Chr2g0333911 28.139 231 146 7 364 591 147 360 2.92e-15 79.7
Msa1414830 MtrunA17_Chr3g0080941 23.975 488 337 9 127 595 977 1449 2.36e-29 124
Msa1414830 MtrunA17_Chr3g0080941 24.190 401 270 9 206 595 443 820 4.61e-20 95.5
Msa1414830 MtrunA17_Chr8g0341811 30.876 217 147 1 386 602 1040 1253 3.99e-28 120
Msa1414830 MtrunA17_Chr8g0341811 29.204 226 136 4 389 613 449 651 5.33e-22 101
Msa1414830 MtrunA17_Chr1g0195691 32.456 228 149 3 376 602 1271 1494 5.29e-28 120
Msa1414830 MtrunA17_Chr1g0195691 25.349 430 259 16 206 613 475 864 3.69e-22 102
Msa1414830 MtrunA17_Chr8g0393151 33.632 223 134 4 386 603 27 240 4.90e-27 110
Msa1414830 MtrunA17_Chr8g0341801 28.685 251 170 2 351 595 154 401 9.37e-26 110
Msa1414830 MtrunA17_Chr6g0484351 30.909 220 149 1 376 595 410 626 5.97e-25 109
Msa1414830 MtrunA17_Chr6g0452051 37.725 167 97 3 348 511 252 414 6.98e-23 101
Msa1414830 MtrunA17_Chr8g0366471 43.860 114 64 0 499 612 7 120 3.39e-22 93.2
Msa1414830 MtrunA17_Chr8g0366451 32.353 204 131 3 311 511 248 447 4.91e-21 96.3
Msa1414830 MtrunA17_Chr1g0176451 35.065 231 126 10 378 591 1 224 8.50e-21 96.7
Msa1414830 MtrunA17_Chr6g0484361 30.978 184 110 3 395 577 622 789 4.52e-19 91.7
Msa1414830 MtrunA17_Chr5g0412921 30.455 220 129 4 395 613 628 824 7.60e-19 91.3
Msa1414830 MtrunA17_Chr8g0384391 31.776 214 131 8 386 591 48 254 1.41e-18 89.7
Msa1414830 MtrunA17_Chr5g0408061 34.956 226 127 10 378 591 47 264 1.53e-18 89.7
Msa1414830 MtrunA17_Chr7g0267971 33.333 234 129 11 378 593 138 362 2.12e-18 89.4
Msa1414830 MtrunA17_Chr1g0176441 32.000 250 143 11 378 609 149 389 3.04e-18 89.0
Msa1414830 MtrunA17_Chr6g0463401 24.940 417 256 14 158 552 406 787 4.13e-18 88.6
Msa1414830 MtrunA17_Chr1g0198931 33.061 245 121 11 378 591 76 308 5.11e-18 88.2
Msa1414830 MtrunA17_Chr3g0130331 30.165 242 151 8 362 593 28 261 2.57e-17 85.9
Msa1414830 MtrunA17_Chr2g0316301 32.759 232 133 10 390 605 69 293 7.62e-17 84.3
Msa1414830 MtrunA17_Chr3g0130211 30.392 204 121 5 393 593 54 239 1.20e-16 80.5
Msa1414830 MtrunA17_Chr1g0199471 31.718 227 139 9 377 593 500 720 2.01e-16 83.6
Msa1414830 MtrunA17_Chr8g0359931 34.694 196 100 7 394 575 66 247 4.67e-16 81.6
Msa1414830 MtrunA17_Chr1g0202431 31.019 216 130 8 385 591 39 244 7.36e-16 81.3
Msa1414830 MtrunA17_Chr4g0039261 32.367 207 127 6 394 592 51 252 8.60e-16 80.9
Msa1414830 MtrunA17_Chr7g0257341 31.455 213 136 6 395 605 573 777 1.48e-15 80.9
Msa1414830 MtrunA17_Chr8g0341791 29.299 157 100 3 458 613 19 165 3.39e-15 77.4
Msa1414830 MtrunA17_Chr7g0249091 29.060 234 122 8 390 593 96 315 4.22e-15 77.0
Msa1414830 MtrunA17_Chr4g0050261 28.340 247 151 7 362 592 41 277 2.08e-14 76.6
Msa1414830 MtrunA17_Chr8g0349441 29.189 185 102 4 377 552 36 200 2.08e-14 72.8
Msa1414830 MtrunA17_Chr2g0318061 31.579 209 127 8 394 593 31 232 3.41e-14 74.7
Msa1414830 MtrunA17_Chr4g0039251 29.858 211 127 6 394 592 93 294 3.58e-14 75.9
Msa1414830 MtrunA17_Chr2g0285231 45.333 75 41 0 528 602 25 99 1.10e-13 67.4
Msa1414830 MtrunA17_Chr4g0050251 28.340 247 151 8 362 592 41 277 1.21e-13 74.3
Msa1414830 MtrunA17_Chr3g0129301 30.256 195 109 7 382 574 437 606 1.68e-13 73.9
Msa1414830 MtrunA17_Chr8g0371961 42.169 83 48 0 386 468 10 92 1.76e-13 67.4
Msa1414830 MtrunA17_Chr4g0065231 29.104 268 136 11 370 609 48 289 2.09e-13 73.2
Msa1414830 MtrunA17_Chr3g0102731 30.275 218 124 9 389 591 93 297 6.04e-13 71.6
Msa1414830 MtrunA17_Chr5g0446901 32.227 211 123 10 394 591 109 312 1.41e-12 70.5
Msa1414830 MtrunA17_Chr3g0132711 25.822 213 148 5 393 602 208 413 1.50e-12 70.5
Msa1414830 MtrunA17_Chr3g0093041 24.510 204 144 5 393 593 194 390 4.75e-12 68.9
Msa1414830 MtrunA17_Chr6g0477811 29.545 264 162 11 343 592 14 267 1.29e-11 67.8
Msa1414830 MtrunA17_Chr3g0093091 22.273 220 163 4 389 605 630 844 2.75e-11 67.0
Msa1414830 MtrunA17_Chr7g0262321 30.526 190 119 7 393 575 567 750 3.30e-11 66.6
Msa1414830 MtrunA17_Chr1g0213091 27.638 199 107 7 394 573 122 302 3.69e-11 66.2
Msa1414830 MtrunA17_Chr4g0060501 23.005 213 156 4 385 594 621 828 4.40e-11 66.2
Msa1414830 MtrunA17_Chr4g0060431 22.273 220 163 4 389 605 610 824 4.47e-11 66.2
Msa1414830 MtrunA17_Chr8g0389101 27.542 236 140 9 378 593 37 261 5.33e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1414830 AT5G03910.1 57.282 618 248 4 8 616 24 634 0.0 708
Msa1414830 AT3G28345.1 31.787 582 341 13 63 613 668 1224 4.00e-66 235
Msa1414830 AT3G28345.1 41.045 268 151 3 348 612 329 592 1.26e-51 192
Msa1414830 AT3G28415.1 32.438 521 323 10 106 613 701 1205 1.58e-62 224
Msa1414830 AT3G28415.1 39.033 269 155 4 348 612 308 571 1.10e-47 181
Msa1414830 AT3G28415.2 32.438 521 323 10 106 613 709 1213 1.88e-62 224
Msa1414830 AT3G28415.2 39.033 269 155 4 348 612 316 579 1.21e-47 181
Msa1414830 AT3G28380.1 31.118 617 352 18 42 613 636 1224 4.61e-62 223
Msa1414830 AT3G28380.1 38.141 312 168 8 309 611 300 595 1.60e-47 180
Msa1414830 AT5G39040.1 31.992 522 299 11 115 611 132 622 1.24e-61 216
Msa1414830 AT1G70610.2 32.510 486 299 13 127 596 22 494 2.91e-61 212
Msa1414830 AT3G28390.1 31.895 533 307 11 108 613 706 1209 3.26e-61 221
Msa1414830 AT3G28390.1 44.298 228 120 3 371 595 340 563 1.96e-46 177
Msa1414830 AT1G70610.1 32.510 486 299 13 127 596 203 675 3.56e-60 213
Msa1414830 AT3G28360.1 31.818 506 289 12 135 613 734 1210 2.01e-59 216
Msa1414830 AT3G28360.1 43.363 226 125 2 371 595 339 562 1.66e-45 174
Msa1414830 AT1G28010.1 29.659 499 329 10 109 595 100 588 2.03e-58 213
Msa1414830 AT1G28010.1 30.266 489 288 13 135 595 759 1222 3.90e-52 194
Msa1414830 AT5G58270.1 31.439 563 342 18 64 602 159 701 9.87e-56 201
Msa1414830 AT1G27940.1 28.543 501 332 11 109 595 99 587 1.11e-55 204
Msa1414830 AT1G27940.1 30.584 497 276 12 135 595 757 1220 5.89e-54 199
Msa1414830 AT4G25450.3 29.944 531 300 12 124 596 4 520 1.69e-55 197
Msa1414830 AT1G27940.2 41.016 256 140 3 347 595 122 373 3.53e-55 202
Msa1414830 AT1G27940.2 30.584 497 276 12 135 595 543 1006 3.96e-54 199
Msa1414830 AT4G28630.1 33.708 445 256 14 173 595 224 651 3.87e-55 199
Msa1414830 AT2G36910.1 42.751 269 131 5 349 614 348 596 7.81e-55 202
Msa1414830 AT2G36910.1 38.745 271 155 6 347 609 988 1255 2.20e-50 189
Msa1414830 AT4G28620.1 30.380 553 341 15 64 595 124 653 1.03e-54 197
Msa1414830 AT4G25450.1 29.815 540 307 12 115 596 164 689 2.17e-54 197
Msa1414830 AT3G28860.1 30.223 493 313 11 120 595 748 1226 1.03e-53 199
Msa1414830 AT3G28860.1 30.891 505 315 12 109 595 93 581 1.73e-50 189
Msa1414830 AT2G47000.6 31.792 519 311 15 109 603 769 1268 1.50e-53 198
Msa1414830 AT2G47000.6 43.830 235 125 3 371 602 377 607 4.94e-53 197
Msa1414830 AT2G47000.5 31.792 519 311 15 109 603 769 1268 1.50e-53 198
Msa1414830 AT2G47000.5 43.830 235 125 3 371 602 377 607 4.94e-53 197
Msa1414830 AT2G47000.1 31.792 519 311 15 109 603 769 1268 1.50e-53 198
Msa1414830 AT2G47000.1 43.830 235 125 3 371 602 377 607 4.94e-53 197
Msa1414830 AT1G10680.1 32.277 505 291 15 135 611 737 1218 2.46e-53 197
Msa1414830 AT1G10680.1 41.379 261 139 5 355 612 338 587 2.91e-52 194
Msa1414830 AT2G47000.3 43.830 235 125 3 371 602 377 607 2.48e-53 197
Msa1414830 AT2G47000.7 43.830 235 125 3 371 602 377 607 2.48e-53 197
Msa1414830 AT2G47000.4 43.830 235 125 3 371 602 377 607 3.46e-53 197
Msa1414830 AT2G47000.2 43.830 235 125 3 371 602 377 607 4.32e-53 197
Msa1414830 AT2G47000.2 27.692 390 241 13 109 475 769 1140 5.36e-22 101
Msa1414830 AT1G02520.1 42.339 248 133 4 356 595 352 597 2.21e-52 195
Msa1414830 AT1G02520.1 30.375 507 319 12 109 595 759 1251 3.79e-49 185
Msa1414830 AT1G02520.2 42.339 248 133 4 356 595 352 597 2.21e-52 195
Msa1414830 AT1G02520.2 30.375 507 319 12 109 595 759 1251 3.79e-49 185
Msa1414830 AT1G02520.3 42.339 248 133 4 356 595 352 597 2.21e-52 195
Msa1414830 AT1G02520.3 30.375 507 319 12 109 595 759 1251 3.79e-49 185
Msa1414830 AT1G10680.2 41.379 261 139 5 355 612 338 587 2.24e-52 194
Msa1414830 AT1G10680.2 32.071 449 258 14 135 559 737 1162 4.11e-43 167
Msa1414830 AT4G25960.1 30.906 508 306 15 111 595 761 1246 5.09e-52 194
Msa1414830 AT4G25960.1 29.485 563 361 14 66 612 92 634 1.27e-51 192
Msa1414830 AT3G62150.3 41.532 248 135 4 356 595 374 619 5.76e-52 193
Msa1414830 AT3G62150.3 32.150 507 305 14 119 603 789 1278 4.85e-51 191
Msa1414830 AT3G62150.2 41.532 248 135 4 356 595 374 619 5.76e-52 193
Msa1414830 AT3G62150.2 32.150 507 305 14 119 603 789 1278 4.85e-51 191
Msa1414830 AT3G62150.1 41.532 248 135 4 356 595 374 619 5.76e-52 193
Msa1414830 AT3G62150.1 32.150 507 305 14 119 603 789 1278 4.85e-51 191
Msa1414830 AT4G18050.1 43.426 251 127 6 354 595 327 571 1.53e-51 192
Msa1414830 AT4G18050.1 38.487 304 175 5 306 602 919 1217 5.77e-50 187
Msa1414830 AT4G18050.2 43.426 251 127 6 354 595 337 581 1.78e-51 192
Msa1414830 AT4G18050.2 38.487 304 175 5 306 602 929 1227 6.91e-50 187
Msa1414830 AT5G46540.1 30.210 523 311 12 109 602 732 1229 2.25e-51 192
Msa1414830 AT5G46540.1 29.915 468 300 13 143 595 119 573 4.52e-50 188
Msa1414830 AT4G01830.2 29.920 498 303 13 132 603 501 978 2.72e-51 191
Msa1414830 AT4G01830.2 42.194 237 133 3 371 605 112 346 1.23e-49 186
Msa1414830 AT4G01830.1 29.920 498 303 13 132 603 735 1212 4.30e-51 191
Msa1414830 AT4G01830.1 42.194 237 133 3 371 605 346 580 1.22e-49 186
Msa1414830 AT4G01820.2 41.313 259 141 5 356 605 319 575 5.30e-50 187
Msa1414830 AT1G02530.2 40.726 248 137 4 356 595 339 584 6.85e-50 187
Msa1414830 AT4G01820.1 41.313 259 141 5 356 605 319 575 7.72e-50 187
Msa1414830 AT4G01820.1 29.688 512 315 12 118 603 719 1211 1.00e-49 187
Msa1414830 AT1G02530.1 40.726 248 137 4 356 595 339 584 9.35e-50 187
Msa1414830 AT1G02530.1 41.502 253 138 5 351 595 996 1246 7.81e-47 178
Msa1414830 AT2G39480.1 36.131 274 158 6 347 615 379 640 1.15e-41 162
Msa1414830 AT2G39480.1 39.381 226 129 5 374 595 1154 1375 3.35e-37 149
Msa1414830 AT2G39480.2 36.131 274 158 6 347 615 199 460 1.17e-41 162
Msa1414830 AT2G39480.2 39.381 226 129 5 374 595 974 1195 3.64e-37 149
Msa1414830 AT3G55320.1 36.029 272 157 6 347 613 381 640 1.72e-40 159
Msa1414830 AT3G55320.1 26.824 507 331 16 111 595 888 1376 1.24e-36 147
Msa1414830 AT3G60160.1 29.963 267 178 4 351 611 1222 1485 7.79e-35 142
Msa1414830 AT3G60160.1 33.136 169 95 5 458 611 698 863 9.53e-15 78.6
Msa1414830 AT3G60160.3 29.963 267 178 4 351 611 1186 1449 8.27e-35 142
Msa1414830 AT3G60160.3 33.136 169 95 5 458 611 662 827 9.71e-15 78.6
Msa1414830 AT2G34660.1 26.386 523 317 13 108 596 969 1457 1.68e-34 140
Msa1414830 AT2G34660.1 25.572 481 309 14 133 595 369 818 2.86e-24 108
Msa1414830 AT2G34660.2 26.386 523 317 13 108 596 969 1457 1.68e-34 140
Msa1414830 AT2G34660.2 25.572 481 309 14 133 595 369 818 2.86e-24 108
Msa1414830 AT1G04120.1 30.040 253 166 3 351 596 1235 1483 1.80e-34 140
Msa1414830 AT1G04120.1 31.818 220 126 4 395 613 640 836 1.45e-21 100
Msa1414830 AT2G34660.3 26.386 523 317 13 108 596 682 1170 2.06e-34 140
Msa1414830 AT2G34660.3 25.572 481 309 14 133 595 82 531 4.07e-24 108
Msa1414830 AT1G04120.3 30.040 253 166 3 351 596 1200 1448 2.40e-34 140
Msa1414830 AT1G04120.3 31.818 220 126 4 395 613 605 801 2.18e-21 100
Msa1414830 AT3G60970.1 29.963 267 178 4 351 611 769 1032 3.18e-34 139
Msa1414830 AT3G60970.1 30.144 209 123 4 395 596 232 424 8.31e-19 91.7
Msa1414830 AT3G59140.1 30.075 266 177 4 351 610 1174 1436 9.40e-34 138
Msa1414830 AT3G59140.1 30.693 202 123 3 395 595 620 805 1.58e-21 100
Msa1414830 AT1G30400.2 26.592 534 322 13 108 605 964 1463 1.83e-33 137
Msa1414830 AT1G30400.2 25.314 478 314 13 133 595 369 818 3.37e-23 105
Msa1414830 AT1G30400.1 26.592 534 322 13 108 605 964 1463 1.83e-33 137
Msa1414830 AT1G30400.1 25.314 478 314 13 133 595 369 818 3.37e-23 105
Msa1414830 AT3G13100.1 33.182 220 144 2 376 595 1239 1455 2.06e-32 134
Msa1414830 AT3G13100.1 31.210 157 97 3 458 613 692 838 1.56e-14 77.8
Msa1414830 AT1G04120.2 29.961 257 156 5 351 596 1235 1478 2.39e-32 134
Msa1414830 AT1G04120.2 31.818 220 126 4 395 613 640 836 1.51e-21 100
Msa1414830 AT3G13100.2 33.182 220 144 2 376 595 994 1210 3.48e-32 133
Msa1414830 AT3G13100.2 31.210 157 97 3 458 613 447 593 2.22e-14 77.4
Msa1414830 AT3G62700.1 33.182 220 144 1 376 595 1295 1511 1.09e-31 132
Msa1414830 AT3G62700.1 26.846 298 186 7 324 613 580 853 8.58e-21 98.2
Msa1414830 AT1G30410.5 24.630 540 350 13 88 595 820 1334 6.02e-31 130
Msa1414830 AT1G30410.5 30.583 206 119 5 395 595 518 704 5.57e-16 82.8
Msa1414830 AT1G30410.2 24.675 539 349 13 89 595 936 1449 6.08e-31 130
Msa1414830 AT1G30410.2 30.583 206 119 5 395 595 633 819 4.22e-16 83.2
Msa1414830 AT1G30410.6 24.675 539 349 13 89 595 936 1449 6.08e-31 130
Msa1414830 AT1G30410.6 30.583 206 119 5 395 595 633 819 4.22e-16 83.2
Msa1414830 AT1G30410.4 24.675 539 349 13 89 595 936 1449 6.08e-31 130
Msa1414830 AT1G30410.4 30.583 206 119 5 395 595 633 819 4.22e-16 83.2
Msa1414830 AT3G13090.1 29.084 251 169 3 351 595 1186 1433 6.48e-31 129
Msa1414830 AT3G13090.1 30.374 214 131 5 384 595 607 804 1.67e-14 77.8
Msa1414830 AT1G30410.1 24.675 539 349 13 89 595 939 1452 7.41e-31 129
Msa1414830 AT1G30410.1 30.583 206 119 5 395 595 636 822 4.64e-16 82.8
Msa1414830 AT1G30420.1 24.950 505 331 11 117 595 967 1449 7.88e-31 129
Msa1414830 AT1G30420.1 25.185 405 256 11 206 595 447 819 7.65e-17 85.5
Msa1414830 AT3G13080.1 31.364 220 148 2 376 595 1267 1483 1.08e-30 129
Msa1414830 AT3G13080.1 25.378 331 214 8 292 613 548 854 3.83e-15 80.1
Msa1414830 AT3G13080.5 30.909 220 149 2 376 595 1267 1483 1.10e-29 125
Msa1414830 AT3G13080.5 25.378 331 214 8 292 613 548 854 2.74e-15 80.5
Msa1414830 AT2G47800.1 32.127 221 147 1 376 596 1272 1489 1.62e-29 125
Msa1414830 AT2G47800.1 28.859 298 180 8 324 613 582 855 9.54e-22 101
Msa1414830 AT3G21250.5 30.000 220 151 1 376 595 1208 1424 8.90e-29 123
Msa1414830 AT3G21250.5 24.611 321 209 9 300 609 523 821 4.66e-20 95.9
Msa1414830 AT3G21250.4 30.000 220 151 1 376 595 1219 1435 9.41e-29 123
Msa1414830 AT3G21250.4 23.853 327 215 8 300 609 523 832 1.46e-21 100
Msa1414830 AT3G21250.2 30.000 220 151 1 376 595 1213 1429 9.48e-29 123
Msa1414830 AT3G21250.2 23.853 327 215 8 300 609 517 826 1.33e-21 100
Msa1414830 AT3G21250.1 30.000 220 151 1 376 595 1202 1418 9.70e-29 123
Msa1414830 AT3G21250.1 24.611 321 209 9 300 609 517 815 4.78e-20 95.5
Msa1414830 AT3G21250.6 30.000 220 151 1 376 595 797 1013 1.75e-28 122
Msa1414830 AT3G21250.6 23.853 327 215 8 300 609 101 410 2.08e-21 99.8
Msa1414830 AT3G21250.3 30.000 220 151 1 376 595 797 1013 1.75e-28 122
Msa1414830 AT3G21250.3 23.853 327 215 8 300 609 101 410 2.08e-21 99.8
Msa1414830 AT4G25450.2 25.427 468 277 12 115 524 164 617 2.40e-28 120
Msa1414830 AT1G67940.1 32.589 224 134 5 386 603 36 248 8.40e-27 110
Msa1414830 AT2G07680.6 30.631 222 150 1 374 595 1087 1304 8.59e-26 114
Msa1414830 AT2G07680.6 29.675 246 143 6 368 599 469 698 1.42e-19 94.0
Msa1414830 AT2G07680.5 30.631 222 150 1 374 595 1170 1387 9.14e-26 113
Msa1414830 AT2G07680.5 29.675 246 143 6 368 599 552 781 1.56e-19 94.0
Msa1414830 AT2G07680.4 30.631 222 150 1 374 595 1161 1378 9.20e-26 113
Msa1414830 AT2G07680.4 29.675 246 143 6 368 599 543 772 1.48e-19 94.0
Msa1414830 AT2G07680.1 30.631 222 150 1 374 595 1164 1381 9.37e-26 113
Msa1414830 AT2G07680.1 29.675 246 143 6 368 599 546 775 1.59e-19 94.0
Msa1414830 AT2G07680.3 30.631 222 150 1 374 595 1186 1403 9.95e-26 113
Msa1414830 AT2G07680.3 29.675 246 143 6 368 599 568 797 1.79e-19 94.0
Msa1414830 AT5G39040.2 26.440 382 241 8 115 475 132 494 3.47e-24 107
Msa1414830 AT3G13080.2 27.273 220 132 2 376 595 1267 1458 7.30e-23 104
Msa1414830 AT3G13080.2 25.378 331 214 8 292 613 548 854 3.62e-15 80.1
Msa1414830 AT2G07680.2 29.675 246 143 6 368 599 568 797 1.34e-19 94.0
Msa1414830 AT1G31770.1 33.810 210 117 8 394 591 81 280 3.49e-18 89.0
Msa1414830 AT4G33460.1 29.469 207 119 6 394 593 59 245 3.58e-17 82.4
Msa1414830 AT2G13610.1 29.148 223 140 7 393 609 61 271 3.84e-17 85.9
Msa1414830 AT1G30420.2 30.049 203 124 4 395 595 633 819 5.49e-17 85.9
Msa1414830 AT3G13220.1 34.101 217 117 11 389 591 101 305 2.30e-16 83.2
Msa1414830 AT1G30410.3 30.583 206 119 5 395 595 633 819 4.07e-16 83.2
Msa1414830 AT1G30410.3 23.261 417 266 12 89 473 936 1330 9.88e-16 81.6
Msa1414830 AT3G60160.2 32.558 129 81 2 351 473 1222 1350 4.77e-16 82.8
Msa1414830 AT3G60160.2 33.136 169 95 5 458 611 698 863 6.94e-15 79.0
Msa1414830 AT4G25750.1 31.441 229 139 7 394 616 30 246 5.48e-16 82.0
Msa1414830 AT3G25620.2 32.683 205 110 9 402 591 107 298 5.68e-16 82.0
Msa1414830 AT3G25620.1 32.683 205 110 9 402 591 107 298 9.78e-16 80.5
Msa1414830 AT1G51500.1 30.986 213 125 7 393 592 43 246 2.25e-15 80.1
Msa1414830 AT5G19410.1 34.000 200 103 9 394 575 66 254 2.51e-15 79.7
Msa1414830 AT5G19410.2 34.000 200 103 9 394 575 75 263 2.83e-15 79.7
Msa1414830 AT3G13080.3 25.378 331 214 8 292 613 548 854 3.16e-15 80.1
Msa1414830 AT3G13080.4 25.378 331 214 8 292 613 548 854 3.16e-15 80.1
Msa1414830 AT5G06530.3 32.365 241 132 10 378 595 157 389 3.20e-15 79.7
Msa1414830 AT5G06530.2 31.513 238 138 8 378 595 157 389 3.48e-15 79.7
Msa1414830 AT5G06530.1 31.513 238 138 8 378 595 157 389 3.48e-15 79.7
Msa1414830 AT1G71960.1 31.925 213 121 10 394 592 83 285 1.09e-14 77.8
Msa1414830 AT1G51460.1 31.892 185 116 4 394 573 30 209 1.35e-14 77.8
Msa1414830 AT5G52860.1 28.632 234 120 8 394 609 44 248 2.15e-14 77.0
Msa1414830 AT3G21090.1 31.050 219 129 8 387 592 37 246 3.01e-14 76.6
Msa1414830 AT1G65410.1 29.289 239 115 10 390 593 95 314 5.19e-14 74.3
Msa1414830 AT5G09930.1 31.053 190 108 5 385 574 418 584 7.77e-14 75.1
Msa1414830 AT4G27420.1 32.367 207 127 7 394 591 66 268 2.56e-13 73.6
Msa1414830 AT2G41700.2 29.493 217 135 6 395 605 498 702 3.12e-13 73.9
Msa1414830 AT2G41700.1 29.493 217 135 6 395 605 568 772 3.47e-13 73.6
Msa1414830 AT3G55130.1 29.730 222 133 10 385 592 90 302 3.50e-13 73.2
Msa1414830 AT5G61700.1 26.016 246 147 9 375 602 591 819 5.20e-13 72.8
Msa1414830 AT2G37360.1 30.000 200 101 8 394 573 133 313 5.58e-13 72.8
Msa1414830 AT3G55110.1 28.326 233 128 9 382 592 79 294 5.79e-13 72.4
Msa1414830 AT3G47730.1 24.510 204 144 5 393 593 545 741 1.05e-12 72.0
Msa1414830 AT1G71330.1 32.174 115 77 1 482 595 1 115 1.06e-12 70.1
Msa1414830 AT1G53270.1 30.288 208 128 8 394 591 50 250 1.33e-12 71.2
Msa1414830 AT5G61740.1 25.210 238 165 8 375 605 583 814 1.41e-12 71.6
Msa1414830 AT5G61740.2 25.210 238 165 8 375 605 549 780 1.42e-12 71.2
Msa1414830 AT5G61740.3 25.210 238 165 8 375 605 444 675 1.63e-12 71.2
Msa1414830 AT1G17840.1 29.187 209 133 6 393 592 68 270 2.93e-12 70.1
Msa1414830 AT3G47780.1 24.648 284 168 11 350 605 575 840 4.60e-12 69.7
Msa1414830 AT5G61690.2 24.510 204 144 5 393 593 546 742 5.95e-12 69.3
Msa1414830 AT3G55100.1 27.149 221 123 8 394 593 51 254 8.16e-12 68.9
Msa1414830 AT3G55100.2 27.149 221 123 8 394 593 51 254 8.16e-12 68.9
Msa1414830 AT2G39350.1 27.468 233 123 9 394 598 109 323 1.00e-11 68.6
Msa1414830 AT3G55090.1 27.477 222 117 9 394 591 107 308 1.43e-11 68.2
Msa1414830 AT1G53390.1 28.155 206 136 7 377 575 506 706 1.94e-11 67.8
Msa1414830 AT3G47750.1 25.225 222 132 9 389 594 628 831 2.38e-11 67.4
Msa1414830 AT2G37010.2 28.205 234 138 9 377 593 483 703 2.42e-11 67.4
Msa1414830 AT2G37010.1 28.205 234 138 9 377 593 483 703 2.42e-11 67.4
Msa1414830 AT3G53510.1 28.000 200 105 7 394 573 126 306 7.57e-11 65.9
Msa1414830 AT5G61730.2 23.415 205 145 6 393 593 547 743 9.14e-11 65.5
Msa1414830 AT5G61730.1 23.415 205 145 6 393 593 537 733 9.93e-11 65.5

Find 160 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATTCAGGCTATTTATTT+TGG 0.133141 tig0024143:+58951 Msa1414830:CDS
GTTCTAGTTGTTACCTTTCT+TGG 0.179934 tig0024143:+58606 Msa1414830:CDS
AAATTCTTCTATATTGATTC+TGG 0.200160 tig0024143:+61117 Msa1414830:CDS
AAGTAAATTTCTCACTTAAA+AGG 0.230858 tig0024143:+61907 Msa1414830:three_prime_UTR
GGCCTACCTCATATCTTAAA+TGG 0.236658 tig0024143:+59733 Msa1414830:CDS
ATTGGATTGGATGGAGGTTT+GGG 0.237359 tig0024143:-57000 None:intergenic
AGGAGACATCACAGAATTTC+AGG 0.237554 tig0024143:-59696 None:intergenic
TTTCTTAATTGAGCCTATTC+AGG 0.241314 tig0024143:+59064 Msa1414830:CDS
ATGCACAACACGCGCTTCTT+TGG 0.244308 tig0024143:+57308 Msa1414830:CDS
TGAAAATTTACCTTTGCTTC+TGG 0.253834 tig0024143:-60851 None:intergenic
AATTGGATTGGATGGAGGTT+TGG 0.261226 tig0024143:-57001 None:intergenic
TTGCTGAAAACATTGGTTAT+AGG 0.286443 tig0024143:+60694 Msa1414830:CDS
ACAAGCTGTGGAGCGTTTAA+TGG 0.290445 tig0024143:+61186 Msa1414830:CDS
GGTGGTGACGGCGGAGAATT+TGG 0.290613 tig0024143:-57212 None:intergenic
GTTGATTTGGACTATGTTAC+AGG 0.292806 tig0024143:+59670 Msa1414830:CDS
GTTGCTATTGTTGGCCCGTC+TGG 0.296691 tig0024143:+59787 Msa1414830:CDS
CACCGAACCTGCGCAAAGTA+TGG 0.300639 tig0024143:-58982 None:intergenic
CATTATGTTTCTTGAGGAAA+TGG 0.300997 tig0024143:-56936 None:intergenic
ATATTGGTATTGTATCCTTC+TGG 0.318377 tig0024143:-60798 None:intergenic
TTCGGAATTTGGTTTGGAAT+TGG 0.321532 tig0024143:-57018 None:intergenic
ATTGGATGGAGGTTTGGGTT+TGG 0.327863 tig0024143:-56995 None:intergenic
AGAATATTCCTCTTGGATAA+TGG 0.328281 tig0024143:+61531 Msa1414830:CDS
TGCTGAAAACATTGGTTATA+GGG 0.331651 tig0024143:+60695 Msa1414830:CDS
TAGGCCATCACTGTACTTAA+AGG 0.335395 tig0024143:-59716 None:intergenic
GAAGGATACAATACCAATAT+TGG 0.336333 tig0024143:+60801 Msa1414830:CDS
ATAAATGGCTCACCAGATAT+AGG 0.337032 tig0024143:-59856 None:intergenic
GAAACCAGATGCTGTTGATT+TGG 0.337327 tig0024143:+59657 Msa1414830:intron
TTGGATTGTGTTGTTGTTGT+TGG 0.337896 tig0024143:-57095 None:intergenic
CACTTGCAAAACTGTTGCTT+CGG 0.347951 tig0024143:+59824 Msa1414830:CDS
TGAGCCTCTTGGTCCAATAT+TGG 0.353043 tig0024143:-60814 None:intergenic
CGGCTTTATGACCCTATATC+TGG 0.354734 tig0024143:+59844 Msa1414830:CDS
AACTCTGCAAACGAATGTTC+TGG 0.355588 tig0024143:-60071 None:intergenic
AGTAATTCCCCAGGTTATTC+AGG 0.357510 tig0024143:+58938 Msa1414830:CDS
CATGATAACAATACCTGAAT+AGG 0.358481 tig0024143:-59077 None:intergenic
ATTGCAGGTTATTCCTTGTA+TGG 0.365623 tig0024143:+58584 Msa1414830:intron
TGCACAACACGCGCTTCTTT+GGG 0.366424 tig0024143:+57309 Msa1414830:CDS
GGGATTCGCGCTCGGCGGTT+TGG 0.368627 tig0024143:+57261 Msa1414830:CDS
CACCAAACAAGTTTCACCTT+CGG 0.374225 tig0024143:+56847 Msa1414830:five_prime_UTR
TTCAAACCATTTAAGATATG+AGG 0.384185 tig0024143:-59739 None:intergenic
CACATATAGTTTCAAAATCA+TGG 0.388583 tig0024143:+61696 Msa1414830:three_prime_UTR
TTGCTATTGTTGGCCCGTCT+GGG 0.392985 tig0024143:+59788 Msa1414830:CDS
GCGAAGTTCTTGACCAAGAA+AGG 0.396160 tig0024143:-58619 None:intergenic
TTCCATACTTTGCGCAGGTT+CGG 0.403033 tig0024143:+58980 Msa1414830:CDS
GGAGAGATAGTTGCTATTGT+TGG 0.403468 tig0024143:+59778 Msa1414830:CDS
CCACTTAAAGTTGAGCCTCT+TGG 0.403623 tig0024143:-60825 None:intergenic
CACGTTAAGAAGAGCGTATA+AGG 0.409537 tig0024143:-57482 None:intergenic
AGCAATATCCCCACTCGAAA+CGG 0.419822 tig0024143:-57422 None:intergenic
TGGTTCGAAGGGAGGTGCTT+CGG 0.420084 tig0024143:-57075 None:intergenic
TCCCGAAGGTGAAACTTGTT+TGG 0.422283 tig0024143:-56849 None:intergenic
TAGGAAAAGCTTACAATGAA+TGG 0.424642 tig0024143:+59161 Msa1414830:CDS
TGGTTTGGAATTGGATTGGA+TGG 0.427123 tig0024143:-57009 None:intergenic
GCTGATATCAAAGAAAGTTC+AGG 0.428520 tig0024143:-58472 None:intergenic
TTGCAGAGAACTTGGTACTA+TGG 0.429606 tig0024143:-58413 None:intergenic
GGCTAAAAGAATATTCCTCT+TGG 0.432858 tig0024143:+61524 Msa1414830:CDS
TTTGGAGAGAAGGTTGGAAA+GGG 0.438225 tig0024143:-57194 None:intergenic
CAGAGTCACTTGAGAGTGTC+AGG 0.442996 tig0024143:+58856 Msa1414830:CDS
TCGGCGGTTTGGTTCTTGTT+CGG 0.443065 tig0024143:+57272 Msa1414830:CDS
GCAGAAAATTGCAGAGAACT+TGG 0.447259 tig0024143:-58421 None:intergenic
TAAATGGCTCACCAGATATA+GGG 0.448694 tig0024143:-59855 None:intergenic
ATGGATTCATTGCTATCTTC+TGG 0.449042 tig0024143:+61597 Msa1414830:CDS
GCAAACAAGCGTTCAATAGC+TGG 0.452836 tig0024143:-59196 None:intergenic
TAGTCCAAATCAACAGCATC+TGG 0.452915 tig0024143:-59661 None:intergenic
TTCATTTGATCGCTGTAGCT+TGG 0.457151 tig0024143:+59019 Msa1414830:CDS
AATAAATAGCCTGAATAACC+TGG 0.460235 tig0024143:-58947 None:intergenic
TTCGTTGAACGCGGTTTATG+AGG 0.460446 tig0024143:+57336 Msa1414830:CDS
AAGGTTGGAAAGGGAGTAGA+CGG 0.461254 tig0024143:-57185 None:intergenic
ACCAAACAAGTTTCACCTTC+GGG 0.461424 tig0024143:+56848 Msa1414830:five_prime_UTR
ATGGTTTGAACCTTCACGTT+AGG 0.464084 tig0024143:+59752 Msa1414830:CDS
GCATTGCAGAAAAGTCCATC+AGG 0.470147 tig0024143:-58893 None:intergenic
GAGTGTCAGGTTTAAGAGAC+TGG 0.472219 tig0024143:+58869 Msa1414830:CDS
AATTTGGTTTGGAATTGGAT+TGG 0.473602 tig0024143:-57013 None:intergenic
ATGCAAACATATGAATCAAA+TGG 0.476810 tig0024143:-61645 None:intergenic
TTCTATATTGATTCTGGACG+AGG 0.477901 tig0024143:+61123 Msa1414830:CDS
CAGAGCCAACCGTAGAGGAT+TGG 0.483918 tig0024143:-57151 None:intergenic
GGTTGTTGTGGCGGTGGTGA+CGG 0.484096 tig0024143:-57224 None:intergenic
TTGAACCTTCACGTTAGGCC+TGG 0.487360 tig0024143:+59757 Msa1414830:CDS
ATTTGGAGAGAAGGTTGGAA+AGG 0.487740 tig0024143:-57195 None:intergenic
ATTATGTTTCTTGAGGAAAT+GGG 0.491620 tig0024143:-56935 None:intergenic
ACTTTCTTTGATATCAGCTA+TGG 0.492995 tig0024143:+58477 Msa1414830:CDS
TAAAGAATCACGCAGGATGT+AGG 0.494584 tig0024143:+59142 Msa1414830:intron
TGCTATTGTTGGCCCGTCTG+GGG 0.498020 tig0024143:+59789 Msa1414830:CDS
GTCACGCAGGGATTCGCGCT+CGG 0.508109 tig0024143:+57253 Msa1414830:CDS
GCTTGTGATCTCTCATCGCT+TGG 0.508979 tig0024143:+61488 Msa1414830:CDS
CCAAGAGGCTCAACTTTAAG+TGG 0.510650 tig0024143:+60825 Msa1414830:CDS
TCGCTTGGAAACCGTTATGA+TGG 0.513065 tig0024143:+61503 Msa1414830:CDS
GTTTAAGAGACTGGCCCTGA+TGG 0.513758 tig0024143:+58878 Msa1414830:CDS
CATACTTTGCGCAGGTTCGG+TGG 0.518769 tig0024143:+58983 Msa1414830:CDS
TTTGGAATTGGATTGGATGG+AGG 0.519291 tig0024143:-57006 None:intergenic
GTTGTTGTTGTTGGTTCGAA+GGG 0.520060 tig0024143:-57086 None:intergenic
ACGATTGATGAACAAATCAA+TGG 0.522416 tig0024143:-61860 None:intergenic
TGCAATGATAATGCATATGT+TGG 0.523394 tig0024143:+58441 Msa1414830:CDS
GGACGAGGCAACTTCTGCGT+TGG 0.525874 tig0024143:+61138 Msa1414830:CDS
TGTTGTTGTTGTTGGTTCGA+AGG 0.528253 tig0024143:-57087 None:intergenic
GATGAGAGTGAACATGAGAT+TGG 0.532729 tig0024143:-56959 None:intergenic
GGTAACGACGCCGTTTCGAG+TGG 0.533942 tig0024143:+57412 Msa1414830:CDS
ACTTCGCAAAATATCTAAGA+AGG 0.537461 tig0024143:+58635 Msa1414830:CDS
CGGCGGAGAATTTGGAGAGA+AGG 0.538064 tig0024143:-57204 None:intergenic
GAATCCCTGCGTGACGTCGA+CGG 0.544481 tig0024143:-57245 None:intergenic
TGCAGATGCATAACGAATCA+CGG 0.546053 tig0024143:-61828 None:intergenic
ACAATAGCAACTATCTCTCC+AGG 0.548439 tig0024143:-59775 None:intergenic
GGTACAGTTGCTGAAAACAT+TGG 0.552667 tig0024143:+60687 Msa1414830:CDS
CCTCGTTCTACTATGTTGAA+TGG 0.554792 tig0024143:+61570 Msa1414830:CDS
GTTCTTTCCATACTTTGCGC+AGG 0.557361 tig0024143:+58975 Msa1414830:CDS
GGAGAATTTGGAGAGAAGGT+TGG 0.557861 tig0024143:-57200 None:intergenic
GCTATTGTTGGCCCGTCTGG+GGG 0.558455 tig0024143:+59790 Msa1414830:CDS
ATAAATAGCCTGAATAACCT+GGG 0.561251 tig0024143:-58946 None:intergenic
TCCAAGGAAAATTGAGCCAA+GGG 0.562182 tig0024143:-61937 None:intergenic
CAGAGTTTAAGAAGACATGT+TGG 0.562645 tig0024143:+60087 Msa1414830:CDS
TCTGTTTATGTGTGCGCATG+TGG 0.564446 tig0024143:+61721 Msa1414830:three_prime_UTR
GCTTACAATGAATGGAGAGA+AGG 0.564869 tig0024143:+59169 Msa1414830:CDS
GATTGGCATTATGTTTCTTG+AGG 0.568970 tig0024143:-56942 None:intergenic
TGAGAATGGTGTTTGAAACA+TGG 0.569773 tig0024143:-56910 None:intergenic
TTTATTAGAAAACTTCCAGA+AGG 0.574855 tig0024143:+60783 Msa1414830:CDS
TTCCAAGGAAAATTGAGCCA+AGG 0.576098 tig0024143:-61938 None:intergenic
TGAGGAAATGGGAATGAGAA+TGG 0.576273 tig0024143:-56924 None:intergenic
TTGATTTGGACTATGTTACA+GGG 0.577115 tig0024143:+59671 Msa1414830:CDS
CAAGCTTTCCATTATCCAAG+AGG 0.577336 tig0024143:-61539 None:intergenic
TCTCTCAGCTTATCTGAATG+AGG 0.578614 tig0024143:+58677 Msa1414830:CDS
GGTTCGGTGGTGATTTCAAG+AGG 0.578745 tig0024143:+58996 Msa1414830:CDS
GCAGATGCATAACGAATCAC+GGG 0.580097 tig0024143:-61827 None:intergenic
TAAGTGGAGGCCAGAAGCAA+AGG 0.582508 tig0024143:+60841 Msa1414830:CDS
TACTATGTTGAATGGTCACA+TGG 0.582719 tig0024143:+61578 Msa1414830:CDS
GTCGACGGTTGTTGTGGCGG+TGG 0.585158 tig0024143:-57230 None:intergenic
CGCTGCAGAGCCAACCGTAG+AGG 0.589850 tig0024143:-57156 None:intergenic
GAGAATGGTGTTTGAAACAT+GGG 0.597355 tig0024143:-56909 None:intergenic
TCTCTCCAGGCCTAACGTGA+AGG 0.599106 tig0024143:-59762 None:intergenic
GTTGTTGTTGGTTCGAAGGG+AGG 0.603660 tig0024143:-57083 None:intergenic
TTACAGGCTGGCTATTGCAA+GGG 0.604140 tig0024143:+61084 Msa1414830:intron
GTCTCCTTTAAGTACAGTGA+TGG 0.604185 tig0024143:+59712 Msa1414830:CDS
AAGAAGAGCGTATAAGGTAG+CGG 0.605224 tig0024143:-57476 None:intergenic
AACAACCGTCGACGTCACGC+AGG 0.605708 tig0024143:+57240 Msa1414830:CDS
CTTACAGGCTGGCTATTGCA+AGG 0.606094 tig0024143:+61083 Msa1414830:intron
GTAACGACGCCGTTTCGAGT+GGG 0.606585 tig0024143:+57413 Msa1414830:CDS
GATGAAAGCAGTAATTCCCC+AGG 0.609146 tig0024143:+58929 Msa1414830:CDS
CGTGACGTCGACGGTTGTTG+TGG 0.611347 tig0024143:-57236 None:intergenic
TAACGACGCCGTTTCGAGTG+GGG 0.611528 tig0024143:+57414 Msa1414830:CDS
CTTAAAAGGAGTCTGACCCT+TGG 0.615573 tig0024143:+61921 Msa1414830:three_prime_UTR
GACGTCGACGGTTGTTGTGG+CGG 0.616457 tig0024143:-57233 None:intergenic
ATCTCGCGAAATCATCCCGA+AGG 0.619466 tig0024143:-56863 None:intergenic
CGCTTTCACAAAGAGATACG+CGG 0.623202 tig0024143:-58826 None:intergenic
TTGGGAAGCTTCGTTGAACG+CGG 0.628873 tig0024143:+57327 Msa1414830:CDS
TGTTCGATCGTGTGTTGCAG+AGG 0.633124 tig0024143:+57371 Msa1414830:CDS
TGTTGTGGCGGTGGTGACGG+CGG 0.634312 tig0024143:-57221 None:intergenic
AATACCAATATTGGACCAAG+AGG 0.636919 tig0024143:+60810 Msa1414830:CDS
GCTTTCACAAAGAGATACGC+GGG 0.637972 tig0024143:-58825 None:intergenic
ATGTTTGCATATCTACTGTG+AGG 0.639245 tig0024143:+61658 Msa1414830:three_prime_UTR
CTCATATTCAAATTCAGACA+AGG 0.639888 tig0024143:-61762 None:intergenic
GTAACAACTAGAACCATACA+AGG 0.646113 tig0024143:-58597 None:intergenic
AAGCGCGTGTTGTGCATACG+TGG 0.649016 tig0024143:-57302 None:intergenic
GCGTTTAATGGAAAATCGCA+CGG 0.651374 tig0024143:+61198 Msa1414830:CDS
ACAACCGTCGACGTCACGCA+GGG 0.654065 tig0024143:+57241 Msa1414830:CDS
AGAGGCTCAACTTTAAGTGG+AGG 0.656903 tig0024143:+60828 Msa1414830:CDS
AACCATTTAAGATATGAGGT+AGG 0.658514 tig0024143:-59735 None:intergenic
ACGCAGGGATTCGCGCTCGG+CGG 0.660721 tig0024143:+57256 Msa1414830:CDS
GTTCGATCGTGTGTTGCAGA+GGG 0.670470 tig0024143:+57372 Msa1414830:CDS
CATTGCAGAAAAGTCCATCA+GGG 0.673067 tig0024143:-58892 None:intergenic
TGATTTGGACTATGTTACAG+GGG 0.677901 tig0024143:+59672 Msa1414830:CDS
TAAATAGCCTGAATAACCTG+GGG 0.687037 tig0024143:-58945 None:intergenic
CCATTCAACATAGTAGAACG+AGG 0.706113 tig0024143:-61570 None:intergenic
GTTGTTAGTGAGACAAGCTG+TGG 0.729540 tig0024143:+61174 Msa1414830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAACTGTAAAATTTA+TGG + tig0024143:57759-57778 Msa1414830:intron 10.0%
!!! AACAAATTTTAAAAGTAAAT+TGG - tig0024143:57909-57928 None:intergenic 10.0%
!!! TTTTTTTCTTTTTGAATAAT+AGG + tig0024143:59627-59646 Msa1414830:intron 10.0%
!!! CAGAAATATATATTTTAAAA+GGG - tig0024143:60365-60384 None:intergenic 10.0%
!!! TCAGAAATATATATTTTAAA+AGG - tig0024143:60366-60385 None:intergenic 10.0%
!! TTAAATAAAATGAGAAATAG+AGG + tig0024143:58194-58213 Msa1414830:intron 15.0%
!! GAAAAGAAAATATAAAACAA+TGG - tig0024143:59322-59341 None:intergenic 15.0%
!! ATAAGAAGAAAAAAAAATCT+AGG + tig0024143:59374-59393 Msa1414830:intron 15.0%
!! TCATCTTCATATTAAATAAA+TGG - tig0024143:59874-59893 None:intergenic 15.0%
!!! ATATATATTTTAAAAGGGAT+TGG - tig0024143:60360-60379 None:intergenic 15.0%
!!! TTAATACATCATTTTGAATA+TGG - tig0024143:60504-60523 None:intergenic 15.0%
!! ACTGTAAAATTTATGGTTAA+TGG + tig0024143:57766-57785 Msa1414830:intron 20.0%
!!! GTTAATGGCATTTAAAATTA+TGG + tig0024143:57781-57800 Msa1414830:intron 20.0%
!! TCTAAAAAAATGAACATTAG+GGG - tig0024143:58125-58144 None:intergenic 20.0%
!!! CTCTAAAAAAATGAACATTA+GGG - tig0024143:58126-58145 None:intergenic 20.0%
!! CATTCAACATATTATACAAA+GGG - tig0024143:58161-58180 None:intergenic 20.0%
!! TCATTCAACATATTATACAA+AGG - tig0024143:58162-58181 None:intergenic 20.0%
!!! TACTTTTTAGTTCAATTGAT+TGG + tig0024143:58336-58355 Msa1414830:intron 20.0%
!! TATGACAAAGTTCAAAAATA+AGG + tig0024143:59219-59238 Msa1414830:CDS 20.0%
!! TATAAAACAATGGAAAAGAA+AGG - tig0024143:59312-59331 None:intergenic 20.0%
!!! ATCTAGCTTTTAAAAAAAAG+GGG - tig0024143:59585-59604 None:intergenic 20.0%
!!! CATCTAGCTTTTAAAAAAAA+GGG - tig0024143:59586-59605 None:intergenic 20.0%
!!! TCATCTAGCTTTTAAAAAAA+AGG - tig0024143:59587-59606 None:intergenic 20.0%
!!! TTTTCTTTTTGAATAATAGG+TGG + tig0024143:59630-59649 Msa1414830:intron 20.0%
!!! ATACTTAATTTTATCATGTG+TGG + tig0024143:59896-59915 Msa1414830:intron 20.0%
!! AATACATATCTTATACTAAC+TGG + tig0024143:59945-59964 Msa1414830:intron 20.0%
!!! TAAAAAATGTACAAGCTTTT+AGG + tig0024143:60204-60223 Msa1414830:intron 20.0%
!! TGATAAACTAGTATAAATTC+AGG + tig0024143:60267-60286 Msa1414830:intron 20.0%
!! TAAATGATGAGGATAATTAT+AGG - tig0024143:60395-60414 None:intergenic 20.0%
!!! AAATTCTTCTATATTGATTC+TGG + tig0024143:61117-61136 Msa1414830:CDS 20.0%
!! CAAAACTATAAGAATTACTA+AGG - tig0024143:61407-61426 None:intergenic 20.0%
!! AAGTAAATTTCTCACTTAAA+AGG + tig0024143:61907-61926 Msa1414830:three_prime_UTR 20.0%
! ATTATGTTTCTTGAGGAAAT+GGG - tig0024143:56938-56957 None:intergenic 25.0%
!! ACTGTTTTACTCAAAAACTT+TGG + tig0024143:57550-57569 Msa1414830:intron 25.0%
! TACTTAATGCAAATTCTGAT+TGG + tig0024143:57635-57654 Msa1414830:intron 25.0%
! CAGTGTAAAAAGTTCTATAT+AGG + tig0024143:57662-57681 Msa1414830:intron 25.0%
! TTATGGTTTATTACGTTCAA+TGG + tig0024143:57798-57817 Msa1414830:intron 25.0%
!! GCTTGTTAATGAATATAACA+AGG - tig0024143:57844-57863 None:intergenic 25.0%
!! CCTCTAAAAAAATGAACATT+AGG - tig0024143:58127-58146 None:intergenic 25.0%
!!! CCTAATGTTCATTTTTTTAG+AGG + tig0024143:58124-58143 Msa1414830:intron 25.0%
! AACATATTATACAAAGGGAT+AGG - tig0024143:58156-58175 None:intergenic 25.0%
! GTATAATATGTTGAATGAGA+AGG + tig0024143:58164-58183 Msa1414830:intron 25.0%
! GAACATAAATGGAATTATTG+TGG - tig0024143:58295-58314 None:intergenic 25.0%
! GCAAATAAATGGAACATAAA+TGG - tig0024143:58306-58325 None:intergenic 25.0%
! TTCTTCTTAAAGTACAATGA+AGG - tig0024143:58724-58743 None:intergenic 25.0%
!! GTTATTCAGGCTATTTATTT+TGG + tig0024143:58951-58970 Msa1414830:CDS 25.0%
! GAAGAAAAAAAAATCTAGGA+TGG + tig0024143:59378-59397 Msa1414830:intron 25.0%
!!! AGATTTTAAAACAGTAGAAC+AGG - tig0024143:59420-59439 None:intergenic 25.0%
!!! GTTCTACTGTTTTAAAATCT+AGG + tig0024143:59420-59439 Msa1414830:intron 25.0%
!!! TCTAGCTTTTAAAAAAAAGG+GGG - tig0024143:59584-59603 None:intergenic 25.0%
!! TTCAAACCATTTAAGATATG+AGG - tig0024143:59742-59761 None:intergenic 25.0%
!!! GTTTTAACTGAAACAAAGTT+TGG + tig0024143:60304-60323 Msa1414830:intron 25.0%
!!! AACCAATTTTGAGACAAAAA+TGG - tig0024143:60533-60552 None:intergenic 25.0%
!!! TTTTTTAAAACTGGTTCTTG+TGG - tig0024143:60557-60576 None:intergenic 25.0%
!!! AGAACCAGTTTTAAAAAACT+TGG + tig0024143:60559-60578 Msa1414830:intron 25.0%
!!! GAACCAGTTTTAAAAAACTT+GGG + tig0024143:60560-60579 Msa1414830:intron 25.0%
! TTTATTAGAAAACTTCCAGA+AGG + tig0024143:60783-60802 Msa1414830:CDS 25.0%
! TAACTTGATAAAGAAAACCA+TGG + tig0024143:60933-60952 Msa1414830:intron 25.0%
!! GTTTTCAATATGTTAGTCAT+TGG + tig0024143:61365-61384 Msa1414830:intron 25.0%
!! TATTCTTTTAGCCATCATAA+CGG - tig0024143:61517-61536 None:intergenic 25.0%
! ATGCAAACATATGAATCAAA+TGG - tig0024143:61648-61667 None:intergenic 25.0%
! CACATATAGTTTCAAAATCA+TGG + tig0024143:61696-61715 Msa1414830:three_prime_UTR 25.0%
!! AATAGATTTTCCAAATTCCA+AGG - tig0024143:61956-61975 None:intergenic 25.0%
CATTATGTTTCTTGAGGAAA+TGG - tig0024143:56939-56958 None:intergenic 30.0%
!! AATTTGGTTTGGAATTGGAT+TGG - tig0024143:57016-57035 None:intergenic 30.0%
!!! TTAGGTATGGTTTTAGGAAT+TGG - tig0024143:57117-57136 None:intergenic 30.0%
! CTTCAAAAGTTTTACACTGT+AGG - tig0024143:57605-57624 None:intergenic 30.0%
AATGGATAACTTATGAGTTG+TGG + tig0024143:57816-57835 Msa1414830:intron 30.0%
! GTCATACAAAGTACCATATT+AGG - tig0024143:58029-58048 None:intergenic 30.0%
CGCAAATTTATTGTACTTTG+TGG + tig0024143:58076-58095 Msa1414830:intron 30.0%
ATGAGAAATAGAGGATTGAA+TGG + tig0024143:58203-58222 Msa1414830:intron 30.0%
AAATAGAGGATTGAATGGTT+GGG + tig0024143:58208-58227 Msa1414830:intron 30.0%
TACAAGCAAAAACATGAGAA+GGG - tig0024143:58258-58277 None:intergenic 30.0%
ATGTTCCATTTATTTGCATG+CGG + tig0024143:58309-58328 Msa1414830:intron 30.0%
AAAAACCGCATGCAAATAAA+TGG - tig0024143:58317-58336 None:intergenic 30.0%
! TGCAATGATAATGCATATGT+TGG + tig0024143:58441-58460 Msa1414830:CDS 30.0%
ACTTTCTTTGATATCAGCTA+TGG + tig0024143:58477-58496 Msa1414830:CDS 30.0%
! TTCTGAAAGAACAATCAAGT+GGG - tig0024143:58530-58549 None:intergenic 30.0%
! TTTCTGAAAGAACAATCAAG+TGG - tig0024143:58531-58550 None:intergenic 30.0%
ATTGTTCTTTCAGAAAGACT+AGG + tig0024143:58535-58554 Msa1414830:intron 30.0%
ACTTCGCAAAATATCTAAGA+AGG + tig0024143:58635-58654 Msa1414830:CDS 30.0%
ATAAATAGCCTGAATAACCT+GGG - tig0024143:58949-58968 None:intergenic 30.0%
AATAAATAGCCTGAATAACC+TGG - tig0024143:58950-58969 None:intergenic 30.0%
TTTCTTAATTGAGCCTATTC+AGG + tig0024143:59064-59083 Msa1414830:CDS 30.0%
CATGATAACAATACCTGAAT+AGG - tig0024143:59080-59099 None:intergenic 30.0%
! CTATTCAGGTATTGTTATCA+TGG + tig0024143:59078-59097 Msa1414830:intron 30.0%
CTTAAAATAAAGAATCACGC+AGG + tig0024143:59135-59154 Msa1414830:intron 30.0%
TAGGAAAAGCTTACAATGAA+TGG + tig0024143:59161-59180 Msa1414830:CDS 30.0%
! TATAGGGTCTTTTAAACAAG+TGG - tig0024143:59256-59275 None:intergenic 30.0%
TAAAAGACCCTATATGACAT+TGG + tig0024143:59262-59281 Msa1414830:intron 30.0%
!! TAGCTTTTAAAAAAAAGGGG+GGG - tig0024143:59582-59601 None:intergenic 30.0%
!! CTAGCTTTTAAAAAAAAGGG+GGG - tig0024143:59583-59602 None:intergenic 30.0%
!! TTGATTTGGACTATGTTACA+GGG + tig0024143:59671-59690 Msa1414830:CDS 30.0%
! AACCATTTAAGATATGAGGT+AGG - tig0024143:59738-59757 None:intergenic 30.0%
! ATTCTTCTTCTTTTGTATGC+AGG + tig0024143:60157-60176 Msa1414830:intron 30.0%
AACAGTATCAAACCAGTTAT+GGG - tig0024143:60245-60264 None:intergenic 30.0%
AAACAGTATCAAACCAGTTA+TGG - tig0024143:60246-60265 None:intergenic 30.0%
TTAAGGGTAGATAAATGATG+AGG - tig0024143:60406-60425 None:intergenic 30.0%
TAGAATGGAAAAGAGAGAAT+TGG + tig0024143:60456-60475 Msa1414830:intron 30.0%
!! CACCATTTTTGTCTCAAAAT+TGG + tig0024143:60528-60547 Msa1414830:intron 30.0%
ACTTCAATCTCAAATACTGA+TGG + tig0024143:60639-60658 Msa1414830:intron 30.0%
!!! TGATTGTAGACACTTTTTTC+AGG + tig0024143:60666-60685 Msa1414830:intron 30.0%
! TTGCTGAAAACATTGGTTAT+AGG + tig0024143:60694-60713 Msa1414830:CDS 30.0%
! TGCTGAAAACATTGGTTATA+GGG + tig0024143:60695-60714 Msa1414830:CDS 30.0%
TCTGACAACAAAAATTGACA+TGG + tig0024143:60719-60738 Msa1414830:CDS 30.0%
ATATTGGTATTGTATCCTTC+TGG - tig0024143:60801-60820 None:intergenic 30.0%
GAAGGATACAATACCAATAT+TGG + tig0024143:60801-60820 Msa1414830:CDS 30.0%
TGAAAATTTACCTTTGCTTC+TGG - tig0024143:60854-60873 None:intergenic 30.0%
TTATCAAGTCTGTTAGTTCA+TGG - tig0024143:60904-60923 None:intergenic 30.0%
CAAAATTAGCTGTTAATCCA+TGG - tig0024143:60953-60972 None:intergenic 30.0%
! TTCTGTTTGAAAAGAGCTTT+TGG + tig0024143:60973-60992 Msa1414830:intron 30.0%
CACATGACAAATAACAGAAA+AGG - tig0024143:61236-61255 None:intergenic 30.0%
AACATTCTTCCTATGTTCAT+AGG + tig0024143:61464-61483 Msa1414830:intron 30.0%
AGAATATTCCTCTTGGATAA+TGG + tig0024143:61531-61550 Msa1414830:CDS 30.0%
CTCATATTCAAATTCAGACA+AGG - tig0024143:61765-61784 None:intergenic 30.0%
ACGATTGATGAACAAATCAA+TGG - tig0024143:61863-61882 None:intergenic 30.0%
! GAGAATGGTGTTTGAAACAT+GGG - tig0024143:56912-56931 None:intergenic 35.0%
! TGAGAATGGTGTTTGAAACA+TGG - tig0024143:56913-56932 None:intergenic 35.0%
GATTGGCATTATGTTTCTTG+AGG - tig0024143:56945-56964 None:intergenic 35.0%
!! TTCGGAATTTGGTTTGGAAT+TGG - tig0024143:57021-57040 None:intergenic 35.0%
!!! TTTTGGTTCGGAATTTGGTT+TGG - tig0024143:57027-57046 None:intergenic 35.0%
!!! GTTGTTTTTGGTTCGGAATT+TGG - tig0024143:57032-57051 None:intergenic 35.0%
! TTGGATTGTGTTGTTGTTGT+TGG - tig0024143:57098-57117 None:intergenic 35.0%
!!! GTAGAGGATTGGTTTTTGTT+GGG - tig0024143:57143-57162 None:intergenic 35.0%
CAACAAAAACCAATCCTCTA+CGG + tig0024143:57142-57161 Msa1414830:CDS 35.0%
! ATTTTTGTCACCCTGTTACA+TGG + tig0024143:57992-58011 Msa1414830:intron 35.0%
CACAGATTCGTCATTTATTG+GGG - tig0024143:58051-58070 None:intergenic 35.0%
GCACAGATTCGTCATTTATT+GGG - tig0024143:58052-58071 None:intergenic 35.0%
TGCACAGATTCGTCATTTAT+TGG - tig0024143:58053-58072 None:intergenic 35.0%
TTATTGTACTTTGTGGTGTG+AGG + tig0024143:58083-58102 Msa1414830:intron 35.0%
TATTGTACTTTGTGGTGTGA+GGG + tig0024143:58084-58103 Msa1414830:intron 35.0%
GAAATAGAGGATTGAATGGT+TGG + tig0024143:58207-58226 Msa1414830:intron 35.0%
AATAGAGGATTGAATGGTTG+GGG + tig0024143:58209-58228 Msa1414830:intron 35.0%
CTACAAGCAAAAACATGAGA+AGG - tig0024143:58259-58278 None:intergenic 35.0%
GCTGATATCAAAGAAAGTTC+AGG - tig0024143:58475-58494 None:intergenic 35.0%
! GTTATGCTTTTGCAAATTGC+AGG + tig0024143:58569-58588 Msa1414830:intron 35.0%
ATTGCAGGTTATTCCTTGTA+TGG + tig0024143:58584-58603 Msa1414830:intron 35.0%
GTAACAACTAGAACCATACA+AGG - tig0024143:58600-58619 None:intergenic 35.0%
! GTTCTAGTTGTTACCTTTCT+TGG + tig0024143:58606-58625 Msa1414830:CDS 35.0%
GGGGAAAAATATTGAACACA+GGG - tig0024143:58787-58806 None:intergenic 35.0%
CTGCAATGCTGAACAAAAAA+AGG + tig0024143:58907-58926 Msa1414830:CDS 35.0%
TAAATAGCCTGAATAACCTG+GGG - tig0024143:58948-58967 None:intergenic 35.0%
! TTATCATGGTTCAGCTTTTG+AGG + tig0024143:59092-59111 Msa1414830:intron 35.0%
TGCAGATCCAATGTCATATA+GGG - tig0024143:59272-59291 None:intergenic 35.0%
ATGCAGATCCAATGTCATAT+AGG - tig0024143:59273-59292 None:intergenic 35.0%
!! GTTGATTTGGACTATGTTAC+AGG + tig0024143:59670-59689 Msa1414830:CDS 35.0%
! TGATTTGGACTATGTTACAG+GGG + tig0024143:59672-59691 Msa1414830:CDS 35.0%
TAAATGGCTCACCAGATATA+GGG - tig0024143:59858-59877 None:intergenic 35.0%
ATAAATGGCTCACCAGATAT+AGG - tig0024143:59859-59878 None:intergenic 35.0%
TTATCATGTGTGGTTTAGCA+TGG + tig0024143:59906-59925 Msa1414830:intron 35.0%
TATCATGTGTGGTTTAGCAT+GGG + tig0024143:59907-59926 Msa1414830:intron 35.0%
ATTCATATTCTTATACGCGC+AGG + tig0024143:60021-60040 Msa1414830:intron 35.0%
CAGAGTTTAAGAAGACATGT+TGG + tig0024143:60087-60106 Msa1414830:CDS 35.0%
! TACCCTTAAGATCTAGCTTA+AGG + tig0024143:60417-60436 Msa1414830:intron 35.0%
! ACCCTTAAGATCTAGCTTAA+GGG + tig0024143:60418-60437 Msa1414830:intron 35.0%
GAGAGAAAGGAAGAATAGAA+TGG + tig0024143:60441-60460 Msa1414830:intron 35.0%
GGAAAAGAGAGAATTGGAAA+TGG + tig0024143:60462-60481 Msa1414830:intron 35.0%
!!! GCACCCAAGTTTTTTAAAAC+TGG - tig0024143:60566-60585 None:intergenic 35.0%
! GTCTTTACACATAAGGTGTT+TGG - tig0024143:60588-60607 None:intergenic 35.0%
AACTAGATATCTAAGTGCAG+TGG - tig0024143:60616-60635 None:intergenic 35.0%
AATACCAATATTGGACCAAG+AGG + tig0024143:60810-60829 Msa1414830:CDS 35.0%
ACTTCGTTTCTCAAACTTAC+AGG + tig0024143:61068-61087 Msa1414830:intron 35.0%
!! TTCTATATTGATTCTGGACG+AGG + tig0024143:61123-61142 Msa1414830:CDS 35.0%
! AGAATGTTTGAAGCTTCACA+GGG - tig0024143:61452-61471 None:intergenic 35.0%
! AAGAATGTTTGAAGCTTCAC+AGG - tig0024143:61453-61472 None:intergenic 35.0%
GGCTAAAAGAATATTCCTCT+TGG + tig0024143:61524-61543 Msa1414830:CDS 35.0%
TACTATGTTGAATGGTCACA+TGG + tig0024143:61578-61597 Msa1414830:CDS 35.0%
ATGGATTCATTGCTATCTTC+TGG + tig0024143:61597-61616 Msa1414830:CDS 35.0%
ATGTTTGCATATCTACTGTG+AGG + tig0024143:61658-61677 Msa1414830:three_prime_UTR 35.0%
! GCTCAATTTTCCTTGGAATT+TGG + tig0024143:61943-61962 Msa1414830:three_prime_UTR 35.0%
CACCAAACAAGTTTCACCTT+CGG + tig0024143:56847-56866 Msa1414830:five_prime_UTR 40.0%
ACCAAACAAGTTTCACCTTC+GGG + tig0024143:56848-56867 Msa1414830:five_prime_UTR 40.0%
TGAGGAAATGGGAATGAGAA+TGG - tig0024143:56927-56946 None:intergenic 40.0%
GATGAGAGTGAACATGAGAT+TGG - tig0024143:56962-56981 None:intergenic 40.0%
! ATTGGATTGGATGGAGGTTT+GGG - tig0024143:57003-57022 None:intergenic 40.0%
! AATTGGATTGGATGGAGGTT+TGG - tig0024143:57004-57023 None:intergenic 40.0%
! TTTGGAATTGGATTGGATGG+AGG - tig0024143:57009-57028 None:intergenic 40.0%
! TGGTTTGGAATTGGATTGGA+TGG - tig0024143:57012-57031 None:intergenic 40.0%
!!! AGTGGTGGTTGTTTTTGGTT+CGG - tig0024143:57039-57058 None:intergenic 40.0%
!!! TGCTTCGGATTTTTAGGTTC+GGG - tig0024143:57063-57082 None:intergenic 40.0%
!!! GTGCTTCGGATTTTTAGGTT+CGG - tig0024143:57064-57083 None:intergenic 40.0%
!! GTTGTTGTTGTTGGTTCGAA+GGG - tig0024143:57089-57108 None:intergenic 40.0%
!! TGTTGTTGTTGTTGGTTCGA+AGG - tig0024143:57090-57109 None:intergenic 40.0%
! TTTTGTTGGGAGGTTAGGTA+TGG - tig0024143:57130-57149 None:intergenic 40.0%
!! TTGGTTTTTGTTGGGAGGTT+AGG - tig0024143:57135-57154 None:intergenic 40.0%
!!! CGTAGAGGATTGGTTTTTGT+TGG - tig0024143:57144-57163 None:intergenic 40.0%
AAAAACCAATCCTCTACGGT+TGG + tig0024143:57146-57165 Msa1414830:CDS 40.0%
TTTGGAGAGAAGGTTGGAAA+GGG - tig0024143:57197-57216 None:intergenic 40.0%
ATTTGGAGAGAAGGTTGGAA+AGG - tig0024143:57198-57217 None:intergenic 40.0%
!!! AGGGAACTTGCGTTTTTTGA+AGG + tig0024143:57391-57410 Msa1414830:CDS 40.0%
! AAGAAGAGCGTATAAGGTAG+CGG - tig0024143:57479-57498 None:intergenic 40.0%
! CACGTTAAGAAGAGCGTATA+AGG - tig0024143:57485-57504 None:intergenic 40.0%
ACAATCCATGCCATGTAACA+GGG - tig0024143:58005-58024 None:intergenic 40.0%
TACAATCCATGCCATGTAAC+AGG - tig0024143:58006-58025 None:intergenic 40.0%
! GGCATGGATTGTACCTAATA+TGG + tig0024143:58013-58032 Msa1414830:intron 40.0%
ATTGTACTTTGTGGTGTGAG+GGG + tig0024143:58085-58104 Msa1414830:intron 40.0%
ATAGAGGATTGAATGGTTGG+GGG + tig0024143:58210-58229 Msa1414830:intron 40.0%
CTATGGTCTGTCAGAAACAA+GGG - tig0024143:58399-58418 None:intergenic 40.0%
ACTATGGTCTGTCAGAAACA+AGG - tig0024143:58400-58419 None:intergenic 40.0%
TTGCAGAGAACTTGGTACTA+TGG - tig0024143:58416-58435 None:intergenic 40.0%
GCAGAAAATTGCAGAGAACT+TGG - tig0024143:58424-58443 None:intergenic 40.0%
TCTCTCAGCTTATCTGAATG+AGG + tig0024143:58677-58696 Msa1414830:CDS 40.0%
CAAGATTTGCAAACAGTGCA+AGG - tig0024143:58757-58776 None:intergenic 40.0%
GGGGGAAAAATATTGAACAC+AGG - tig0024143:58788-58807 None:intergenic 40.0%
GCAGCATCTAATTGTTTAGG+GGG - tig0024143:58806-58825 None:intergenic 40.0%
GGCAGCATCTAATTGTTTAG+GGG - tig0024143:58807-58826 None:intergenic 40.0%
GGGCAGCATCTAATTGTTTA+GGG - tig0024143:58808-58827 None:intergenic 40.0%
CATTGCAGAAAAGTCCATCA+GGG - tig0024143:58895-58914 None:intergenic 40.0%
AGTAATTCCCCAGGTTATTC+AGG + tig0024143:58938-58957 Msa1414830:CDS 40.0%
TTCATTTGATCGCTGTAGCT+TGG + tig0024143:59019-59038 Msa1414830:CDS 40.0%
TAAAGAATCACGCAGGATGT+AGG + tig0024143:59142-59161 Msa1414830:intron 40.0%
GCTTACAATGAATGGAGAGA+AGG + tig0024143:59169-59188 Msa1414830:CDS 40.0%
AGGATGAACTGATGTCCATA+AGG + tig0024143:59440-59459 Msa1414830:intron 40.0%
TTTACTGAGCTGACACCTTA+TGG - tig0024143:59458-59477 None:intergenic 40.0%
CCTCGTCTATTGAGATTACA+TGG - tig0024143:59489-59508 None:intergenic 40.0%
CCATGTAATCTCAATAGACG+AGG + tig0024143:59486-59505 Msa1414830:intron 40.0%
! GAAACCAGATGCTGTTGATT+TGG + tig0024143:59657-59676 Msa1414830:intron 40.0%
TAGTCCAAATCAACAGCATC+TGG - tig0024143:59664-59683 None:intergenic 40.0%
AGGAGACATCACAGAATTTC+AGG - tig0024143:59699-59718 None:intergenic 40.0%
GTCTCCTTTAAGTACAGTGA+TGG + tig0024143:59712-59731 Msa1414830:CDS 40.0%
TAGGCCATCACTGTACTTAA+AGG - tig0024143:59719-59738 None:intergenic 40.0%
GGCCTACCTCATATCTTAAA+TGG + tig0024143:59733-59752 Msa1414830:CDS 40.0%
ATGGTTTGAACCTTCACGTT+AGG + tig0024143:59752-59771 Msa1414830:CDS 40.0%
ACAATAGCAACTATCTCTCC+AGG - tig0024143:59778-59797 None:intergenic 40.0%
! GGAGAGATAGTTGCTATTGT+TGG + tig0024143:59778-59797 Msa1414830:CDS 40.0%
! CACTTGCAAAACTGTTGCTT+CGG + tig0024143:59824-59843 Msa1414830:CDS 40.0%
AACTCTGCAAACGAATGTTC+TGG - tig0024143:60074-60093 None:intergenic 40.0%
!! ACAAGCTTTTAGGAGCAGTT+TGG + tig0024143:60214-60233 Msa1414830:intron 40.0%
CCCCTTAAGCTAGATCTTAA+GGG - tig0024143:60422-60441 None:intergenic 40.0%
! CCCTTAAGATCTAGCTTAAG+GGG + tig0024143:60419-60438 Msa1414830:intron 40.0%
TCCCCTTAAGCTAGATCTTA+AGG - tig0024143:60423-60442 None:intergenic 40.0%
!! GGAGCTAGTCTTTACACATA+AGG - tig0024143:60595-60614 None:intergenic 40.0%
GGTACAGTTGCTGAAAACAT+TGG + tig0024143:60687-60706 Msa1414830:CDS 40.0%
GCGTTTAATGGAAAATCGCA+CGG + tig0024143:61198-61217 Msa1414830:CDS 40.0%
TAATGGAAAATCGCACGGTA+TGG + tig0024143:61203-61222 Msa1414830:intron 40.0%
AAGCTTCACAGGGAAGAAAA+GGG - tig0024143:61442-61461 None:intergenic 40.0%
TCACAAGCACCTATGAACAT+AGG - tig0024143:61476-61495 None:intergenic 40.0%
CAAGCTTTCCATTATCCAAG+AGG - tig0024143:61542-61561 None:intergenic 40.0%
CCATTCAACATAGTAGAACG+AGG - tig0024143:61573-61592 None:intergenic 40.0%
CCTCGTTCTACTATGTTGAA+TGG + tig0024143:61570-61589 Msa1414830:CDS 40.0%
TGCAGATGCATAACGAATCA+CGG - tig0024143:61831-61850 None:intergenic 40.0%
TCCAAGGAAAATTGAGCCAA+GGG - tig0024143:61940-61959 None:intergenic 40.0%
TTCCAAGGAAAATTGAGCCA+AGG - tig0024143:61941-61960 None:intergenic 40.0%
! TCCCGAAGGTGAAACTTGTT+TGG - tig0024143:56852-56871 None:intergenic 45.0%
! ATTGGATGGAGGTTTGGGTT+TGG - tig0024143:56998-57017 None:intergenic 45.0%
!!! TTTTTAGGTTCGGGAAGTGG+TGG - tig0024143:57054-57073 None:intergenic 45.0%
!!! GGATTTTTAGGTTCGGGAAG+TGG - tig0024143:57057-57076 None:intergenic 45.0%
! GGGAGGTTAGGTATGGTTTT+AGG - tig0024143:57123-57142 None:intergenic 45.0%
!!! GAGGATTGGTTTTTGTTGGG+AGG - tig0024143:57140-57159 None:intergenic 45.0%
AAGGTTGGAAAGGGAGTAGA+CGG - tig0024143:57188-57207 None:intergenic 45.0%
GGAGAATTTGGAGAGAAGGT+TGG - tig0024143:57203-57222 None:intergenic 45.0%
TTCGTTGAACGCGGTTTATG+AGG + tig0024143:57336-57355 Msa1414830:CDS 45.0%
AGCAATATCCCCACTCGAAA+CGG - tig0024143:57425-57444 None:intergenic 45.0%
TATCAGCTATGGTGAGTCAG+AGG + tig0024143:58488-58507 Msa1414830:intron 45.0%
GCGAAGTTCTTGACCAAGAA+AGG - tig0024143:58622-58641 None:intergenic 45.0%
CGGGCAGCATCTAATTGTTT+AGG - tig0024143:58809-58828 None:intergenic 45.0%
GCTTTCACAAAGAGATACGC+GGG - tig0024143:58828-58847 None:intergenic 45.0%
CGCTTTCACAAAGAGATACG+CGG - tig0024143:58829-58848 None:intergenic 45.0%
GAGTGTCAGGTTTAAGAGAC+TGG + tig0024143:58869-58888 Msa1414830:CDS 45.0%
GCATTGCAGAAAAGTCCATC+AGG - tig0024143:58896-58915 None:intergenic 45.0%
GATGAAAGCAGTAATTCCCC+AGG + tig0024143:58929-58948 Msa1414830:CDS 45.0%
GTTCTTTCCATACTTTGCGC+AGG + tig0024143:58975-58994 Msa1414830:CDS 45.0%
TTCCATACTTTGCGCAGGTT+CGG + tig0024143:58980-58999 Msa1414830:CDS 45.0%
!! AGCTTTTGAGGAGCTGTCTT+TGG + tig0024143:59104-59123 Msa1414830:intron 45.0%
GCAAACAAGCGTTCAATAGC+TGG - tig0024143:59199-59218 None:intergenic 45.0%
GGTTCAAATCTCCTCGAGAA+CGG + tig0024143:59507-59526 Msa1414830:intron 45.0%
! CCATTTTACAACCGTTCTCG+AGG - tig0024143:59521-59540 None:intergenic 45.0%
CCTCGAGAACGGTTGTAAAA+TGG + tig0024143:59518-59537 Msa1414830:intron 45.0%
! CGGCTTTATGACCCTATATC+TGG + tig0024143:59844-59863 Msa1414830:CDS 45.0%
AGTTTGGCAACTCCCATAAC+TGG + tig0024143:60230-60249 Msa1414830:intron 45.0%
! TCTAGCTTAAGGGGAGAGAA+AGG + tig0024143:60428-60447 Msa1414830:intron 45.0%
TGAGCCTCTTGGTCCAATAT+TGG - tig0024143:60817-60836 None:intergenic 45.0%
CCACTTAAAGTTGAGCCTCT+TGG - tig0024143:60828-60847 None:intergenic 45.0%
CCAAGAGGCTCAACTTTAAG+TGG + tig0024143:60825-60844 Msa1414830:CDS 45.0%
AGAGGCTCAACTTTAAGTGG+AGG + tig0024143:60828-60847 Msa1414830:CDS 45.0%
CGTTTCTCAAACTTACAGGC+TGG + tig0024143:61072-61091 Msa1414830:intron 45.0%
! TTACAGGCTGGCTATTGCAA+GGG + tig0024143:61084-61103 Msa1414830:intron 45.0%
GTTGTTAGTGAGACAAGCTG+TGG + tig0024143:61174-61193 Msa1414830:CDS 45.0%
! ACAAGCTGTGGAGCGTTTAA+TGG + tig0024143:61186-61205 Msa1414830:CDS 45.0%
GAAGCTTCACAGGGAAGAAA+AGG - tig0024143:61443-61462 None:intergenic 45.0%
TCGCTTGGAAACCGTTATGA+TGG + tig0024143:61503-61522 Msa1414830:CDS 45.0%
TCTGTTTATGTGTGCGCATG+TGG + tig0024143:61721-61740 Msa1414830:three_prime_UTR 45.0%
GCAGATGCATAACGAATCAC+GGG - tig0024143:61830-61849 None:intergenic 45.0%
CTTAAAAGGAGTCTGACCCT+TGG + tig0024143:61921-61940 Msa1414830:three_prime_UTR 45.0%
! ACCCTTGGCTCAATTTTCCT+TGG + tig0024143:61936-61955 Msa1414830:three_prime_UTR 45.0%
ATCTCGCGAAATCATCCCGA+AGG - tig0024143:56866-56885 None:intergenic 50.0%
!! CGGGAAGTGGTGGTTGTTTT+TGG - tig0024143:57044-57063 None:intergenic 50.0%
!!! GGGAGGTGCTTCGGATTTTT+AGG - tig0024143:57069-57088 None:intergenic 50.0%
!! GTTGTTGTTGGTTCGAAGGG+AGG - tig0024143:57086-57105 None:intergenic 50.0%
!! TCGGCGGTTTGGTTCTTGTT+CGG + tig0024143:57272-57291 Msa1414830:CDS 50.0%
ATGCACAACACGCGCTTCTT+TGG + tig0024143:57308-57327 Msa1414830:CDS 50.0%
TGCACAACACGCGCTTCTTT+GGG + tig0024143:57309-57328 Msa1414830:CDS 50.0%
TTGGGAAGCTTCGTTGAACG+CGG + tig0024143:57327-57346 Msa1414830:CDS 50.0%
TGTTCGATCGTGTGTTGCAG+AGG + tig0024143:57371-57390 Msa1414830:CDS 50.0%
GTTCGATCGTGTGTTGCAGA+GGG + tig0024143:57372-57391 Msa1414830:CDS 50.0%
TGTCACCCTGTTACATGGCA+TGG + tig0024143:57997-58016 Msa1414830:intron 50.0%
!! CAGAGTCACTTGAGAGTGTC+AGG + tig0024143:58856-58875 Msa1414830:CDS 50.0%
! GTTTAAGAGACTGGCCCTGA+TGG + tig0024143:58878-58897 Msa1414830:CDS 50.0%
!! GGTTCGGTGGTGATTTCAAG+AGG + tig0024143:58996-59015 Msa1414830:CDS 50.0%
TTGAACCTTCACGTTAGGCC+TGG + tig0024143:59757-59776 Msa1414830:CDS 50.0%
! TTGCTATTGTTGGCCCGTCT+GGG + tig0024143:59788-59807 Msa1414830:CDS 50.0%
!! TTGTTTTTCCTCCCCCAGAC+GGG - tig0024143:59804-59823 None:intergenic 50.0%
!!! GTTGTTTTTCCTCCCCCAGA+CGG - tig0024143:59805-59824 None:intergenic 50.0%
TAAGTGGAGGCCAGAAGCAA+AGG + tig0024143:60841-60860 Msa1414830:CDS 50.0%
! CTTACAGGCTGGCTATTGCA+AGG + tig0024143:61083-61102 Msa1414830:intron 50.0%
GCTTGTGATCTCTCATCGCT+TGG + tig0024143:61488-61507 Msa1414830:CDS 50.0%
!! TGGTTCGAAGGGAGGTGCTT+CGG - tig0024143:57078-57097 None:intergenic 55.0%
CAGAGCCAACCGTAGAGGAT+TGG - tig0024143:57154-57173 None:intergenic 55.0%
CGGCGGAGAATTTGGAGAGA+AGG - tig0024143:57207-57226 None:intergenic 55.0%
AAGCGCGTGTTGTGCATACG+TGG - tig0024143:57305-57324 None:intergenic 55.0%
! GTAACGACGCCGTTTCGAGT+GGG + tig0024143:57413-57432 Msa1414830:CDS 55.0%
! TAACGACGCCGTTTCGAGTG+GGG + tig0024143:57414-57433 Msa1414830:CDS 55.0%
ACTTTGTGGTGTGAGGGGCA+TGG + tig0024143:58090-58109 Msa1414830:intron 55.0%
! CTTTGTGGTGTGAGGGGCAT+GGG + tig0024143:58091-58110 Msa1414830:intron 55.0%
CACCGAACCTGCGCAAAGTA+TGG - tig0024143:58985-59004 None:intergenic 55.0%
CATACTTTGCGCAGGTTCGG+TGG + tig0024143:58983-59002 Msa1414830:CDS 55.0%
TCTCTCCAGGCCTAACGTGA+AGG - tig0024143:59765-59784 None:intergenic 55.0%
! GTTGCTATTGTTGGCCCGTC+TGG + tig0024143:59787-59806 Msa1414830:CDS 55.0%
TGCTATTGTTGGCCCGTCTG+GGG + tig0024143:59789-59808 Msa1414830:CDS 55.0%
!! GGTGGTGACGGCGGAGAATT+TGG - tig0024143:57215-57234 None:intergenic 60.0%
GGTTGTTGTGGCGGTGGTGA+CGG - tig0024143:57227-57246 None:intergenic 60.0%
GACGTCGACGGTTGTTGTGG+CGG - tig0024143:57236-57255 None:intergenic 60.0%
CGTGACGTCGACGGTTGTTG+TGG - tig0024143:57239-57258 None:intergenic 60.0%
AACAACCGTCGACGTCACGC+AGG + tig0024143:57240-57259 Msa1414830:CDS 60.0%
ACAACCGTCGACGTCACGCA+GGG + tig0024143:57241-57260 Msa1414830:CDS 60.0%
GAATCCCTGCGTGACGTCGA+CGG - tig0024143:57248-57267 None:intergenic 60.0%
GGTAACGACGCCGTTTCGAG+TGG + tig0024143:57412-57431 Msa1414830:CDS 60.0%
GCTATTGTTGGCCCGTCTGG+GGG + tig0024143:59790-59809 Msa1414830:CDS 60.0%
GGACGAGGCAACTTCTGCGT+TGG + tig0024143:61138-61157 Msa1414830:CDS 60.0%
CGCTGCAGAGCCAACCGTAG+AGG - tig0024143:57159-57178 None:intergenic 65.0%
!! TGTTGTGGCGGTGGTGACGG+CGG - tig0024143:57224-57243 None:intergenic 65.0%
GTCGACGGTTGTTGTGGCGG+TGG - tig0024143:57233-57252 None:intergenic 65.0%
GTCACGCAGGGATTCGCGCT+CGG + tig0024143:57253-57272 Msa1414830:CDS 65.0%
ATTGTTGGCCCGTCTGGGGG+AGG + tig0024143:59793-59812 Msa1414830:CDS 65.0%
ACGCAGGGATTCGCGCTCGG+CGG + tig0024143:57256-57275 Msa1414830:CDS 70.0%
GGGATTCGCGCTCGGCGGTT+TGG + tig0024143:57261-57280 Msa1414830:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0024143 gene 56833 61975 56833 ID=Msa1414830;Name=Msa1414830
tig0024143 mRNA 56833 61975 56833 ID=Msa1414830-mRNA-1;Parent=Msa1414830;Name=Msa1414830-mRNA-1;_AED=0.05;_eAED=0.05;_QI=123|0.88|0.9|1|1|1|10|343|616
tig0024143 exon 56833 57501 56833 ID=Msa1414830-mRNA-1:exon:21991;Parent=Msa1414830-mRNA-1
tig0024143 exon 58412 58498 58412 ID=Msa1414830-mRNA-1:exon:21992;Parent=Msa1414830-mRNA-1
tig0024143 exon 58591 58698 58591 ID=Msa1414830-mRNA-1:exon:21993;Parent=Msa1414830-mRNA-1
tig0024143 exon 58819 59085 58819 ID=Msa1414830-mRNA-1:exon:21994;Parent=Msa1414830-mRNA-1
tig0024143 exon 59157 59240 59157 ID=Msa1414830-mRNA-1:exon:21995;Parent=Msa1414830-mRNA-1
tig0024143 exon 59658 59865 59658 ID=Msa1414830-mRNA-1:exon:21996;Parent=Msa1414830-mRNA-1
tig0024143 exon 60043 60128 60043 ID=Msa1414830-mRNA-1:exon:21997;Parent=Msa1414830-mRNA-1
tig0024143 exon 60675 60862 60675 ID=Msa1414830-mRNA-1:exon:21998;Parent=Msa1414830-mRNA-1
tig0024143 exon 61090 61219 61090 ID=Msa1414830-mRNA-1:exon:21999;Parent=Msa1414830-mRNA-1
tig0024143 exon 61486 61975 61486 ID=Msa1414830-mRNA-1:exon:22000;Parent=Msa1414830-mRNA-1
tig0024143 five_prime_UTR 56833 56955 56833 ID=Msa1414830-mRNA-1:five_prime_utr;Parent=Msa1414830-mRNA-1
tig0024143 CDS 56956 57501 56956 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 58412 58498 58412 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 58591 58698 58591 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 58819 59085 58819 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 59157 59240 59157 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 59658 59865 59658 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 60043 60128 60043 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 60675 60862 60675 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 61090 61219 61090 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 CDS 61486 61632 61486 ID=Msa1414830-mRNA-1:cds;Parent=Msa1414830-mRNA-1
tig0024143 three_prime_UTR 61633 61975 61633 ID=Msa1414830-mRNA-1:three_prime_utr;Parent=Msa1414830-mRNA-1
Gene Sequence

>Msa1414830

ATGCCAATCTCATGTTCACTCTCATCATCATTCATTCTTCCAAACCCAAACCTCCATCCAATCCAATTCCAAACCAAATTCCGAACCAAAAACAACCACCACTTCCCGAACCTAAAAATCCGAAGCACCTCCCTTCGAACCAACAACAACAACACAATCCAATTCCTAAAACCATACCTAACCTCCCAACAAAAACCAATCCTCTACGGTTGGCTCTGCAGCGCAATCTCCGTCTACTCCCTTTCCAACCTTCTCTCCAAATTCTCCGCCGTCACCACCGCCACAACAACCGTCGACGTCACGCAGGGATTCGCGCTCGGCGGTTTGGTTCTTGTTCGGTTGATTGCCACGTATGCACAACACGCGCTTCTTTGGGAAGCTTCGTTGAACGCGGTTTATGAGGTTCGTGTTCATGTGTTCGATCGTGTGTTGCAGAGGGAACTTGCGTTTTTTGAAGGTAACGACGCCGTTTCGAGTGGGGATATTGCTTATCGTATTACTGCTGAAGCTTCTGATCTTTCCGCTACCTTATACGCTCTTCTTAACACCATAGTACCAAGTTCTCTGCAATTTTCTGCAATGATAATGCATATGTTGGCTATAAGTCCTGAACTTTCTTTGATATCAGCTATGGTTATTCCTTGTATGGTTCTAGTTGTTACCTTTCTTGGTCAAGAACTTCGCAAAATATCTAAGAAGGCACATATTAGCATTGCTGCTCTCTCAGCTTATCTGAATGAGATGCTGCCCGCGTATCTCTTTGTGAAAGCGAACAACGCAGAGTCACTTGAGAGTGTCAGGTTTAAGAGACTGGCCCTGATGGACTTTTCTGCAATGCTGAACAAAAAAAGGATGAAAGCAGTAATTCCCCAGGTTATTCAGGCTATTTATTTTGGAGTTCTTTCCATACTTTGCGCAGGTTCGGTGGTGATTTCAAGAGGTTCATTTGATCGCTGTAGCTTGGTTTCATTTGTGACGTCATTGCTTTTCTTAATTGAGCCTATTCAGGATGTAGGAAAAGCTTACAATGAATGGAGAGAAGGAGAGCCAGCTATTGAACGCTTGTTTGCTATGACAAAGTTCAAAAATAAGAAACCAGATGCTGTTGATTTGGACTATGTTACAGGGGACCTGAAATTCTGTGATGTCTCCTTTAAGTACAGTGATGGCCTACCTCATATCTTAAATGGTTTGAACCTTCACGTTAGGCCTGGAGAGATAGTTGCTATTGTTGGCCCGTCTGGGGGAGGAAAAACAACACTTGCAAAACTGTTGCTTCGGCTTTATGACCCTATATCTGGTTCTATACTGATTGATAACGAAAACATCCAGAACATTCGTTTGCAGAGTTTAAGAAGACATGTTGGTGTAGTTTCTCAAGATATAACACTTTTTTCAGGTACAGTTGCTGAAAACATTGGTTATAGGGATCTGACAACAAAAATTGACATGGAGAAAGTGAAGCATGTAGCTCAAACTGCTTATGCAGACGAGTTTATTAGAAAACTTCCAGAAGGATACAATACCAATATTGGACCAAGAGGCTCAACTTTAAGTGGAGGCCAGAAGCAAAGGCTGGCTATTGCAAGGGCTTTCTATCAAAATTCTTCTATATTGATTCTGGACGAGGCAACTTCTGCGTTGGATAGTAAATCTGAGTTGTTAGTGAGACAAGCTGTGGAGCGTTTAATGGAAAATCGCACGGTGCTTGTGATCTCTCATCGCTTGGAAACCGTTATGATGGCTAAAAGAATATTCCTCTTGGATAATGGAAAGCTTGAAGAGCTGCCTCGTTCTACTATGTTGAATGGTCACATGGATTCATTGCTATCTTCTGGTCATATTGTTTGA

Protein sequence

>Msa1414830

MPISCSLSSSFILPNPNLHPIQFQTKFRTKNNHHFPNLKIRSTSLRTNNNNTIQFLKPYLTSQQKPILYGWLCSAISVYSLSNLLSKFSAVTTATTTVDVTQGFALGGLVLVRLIATYAQHALLWEASLNAVYEVRVHVFDRVLQRELAFFEGNDAVSSGDIAYRITAEASDLSATLYALLNTIVPSSLQFSAMIMHMLAISPELSLISAMVIPCMVLVVTFLGQELRKISKKAHISIAALSAYLNEMLPAYLFVKANNAESLESVRFKRLALMDFSAMLNKKRMKAVIPQVIQAIYFGVLSILCAGSVVISRGSFDRCSLVSFVTSLLFLIEPIQDVGKAYNEWREGEPAIERLFAMTKFKNKKPDAVDLDYVTGDLKFCDVSFKYSDGLPHILNGLNLHVRPGEIVAIVGPSGGGKTTLAKLLLRLYDPISGSILIDNENIQNIRLQSLRRHVGVVSQDITLFSGTVAENIGYRDLTTKIDMEKVKHVAQTAYADEFIRKLPEGYNTNIGPRGSTLSGGQKQRLAIARAFYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHRLETVMMAKRIFLLDNGKLEELPRSTMLNGHMDSLLSSGHIV*