Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070612.t1 | XP_013445560.1 | 93.6 | 345 | 9 | 2 | 1 | 338 | 46 | 384 | 6.50E-165 | 590.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070612.t1 | Q2QY07 | 85.3 | 258 | 38 | 0 | 81 | 338 | 105 | 362 | 2.3e-118 | 426.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070612.t1 | A0A072TQT5 | 93.6 | 345 | 9 | 2 | 1 | 338 | 46 | 384 | 4.7e-165 | 590.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene070612 | 0.823361 | 1.44E-53 | -1.69E-46 |
MS.gene049171 | MS.gene070612 | 0.889978 | 1.49E-73 | -1.69E-46 |
MS.gene049217 | MS.gene070612 | 0.809906 | 1.50E-50 | -1.69E-46 |
MS.gene049222 | MS.gene070612 | 0.894497 | 2.33E-75 | -1.69E-46 |
MS.gene049232 | MS.gene070612 | 0.810277 | 1.25E-50 | -1.69E-46 |
MS.gene049257 | MS.gene070612 | 0.820597 | 6.31E-53 | -1.69E-46 |
MS.gene049285 | MS.gene070612 | 0.862162 | 6.16E-64 | -1.69E-46 |
MS.gene049320 | MS.gene070612 | 0.843643 | 1.24E-58 | -1.69E-46 |
MS.gene04932 | MS.gene070612 | -0.817819 | 2.71E-52 | -1.69E-46 |
MS.gene04939 | MS.gene070612 | 0.807282 | 5.46E-50 | -1.69E-46 |
MS.gene049609 | MS.gene070612 | 0.864473 | 1.19E-64 | -1.69E-46 |
MS.gene049633 | MS.gene070612 | 0.866029 | 3.84E-65 | -1.69E-46 |
MS.gene049805 | MS.gene070612 | 0.840527 | 8.24E-58 | -1.69E-46 |
MS.gene05010 | MS.gene070612 | 0.819204 | 1.31E-52 | -1.69E-46 |
MS.gene050163 | MS.gene070612 | 0.837827 | 4.13E-57 | -1.69E-46 |
MS.gene050165 | MS.gene070612 | 0.833764 | 4.42E-56 | -1.69E-46 |
MS.gene050170 | MS.gene070612 | 0.899376 | 2.11E-77 | -1.69E-46 |
MS.gene050323 | MS.gene070612 | 0.863389 | 2.58E-64 | -1.69E-46 |
MS.gene050333 | MS.gene070612 | 0.809501 | 1.83E-50 | -1.69E-46 |
MS.gene050338 | MS.gene070612 | -0.833826 | 4.27E-56 | -1.69E-46 |
MS.gene050444 | MS.gene070612 | 0.834238 | 3.36E-56 | -1.69E-46 |
MS.gene050496 | MS.gene070612 | 0.862844 | 3.80E-64 | -1.69E-46 |
MS.gene050504 | MS.gene070612 | 0.866873 | 2.07E-65 | -1.69E-46 |
MS.gene050518 | MS.gene070612 | 0.830288 | 3.20E-55 | -1.69E-46 |
MS.gene050538 | MS.gene070612 | 0.848799 | 4.87E-60 | -1.69E-46 |
MS.gene050553 | MS.gene070612 | 0.813473 | 2.51E-51 | -1.69E-46 |
MS.gene050577 | MS.gene070612 | 0.881389 | 2.50E-70 | -1.69E-46 |
MS.gene050593 | MS.gene070612 | 0.81687 | 4.42E-52 | -1.69E-46 |
MS.gene050612 | MS.gene070612 | 0.863034 | 3.32E-64 | -1.69E-46 |
MS.gene050647 | MS.gene070612 | -0.803972 | 2.70E-49 | -1.69E-46 |
MS.gene050675 | MS.gene070612 | 0.84481 | 6.00E-59 | -1.69E-46 |
MS.gene050699 | MS.gene070612 | 0.85472 | 1.02E-61 | -1.69E-46 |
MS.gene050747 | MS.gene070612 | 0.897106 | 1.94E-76 | -1.69E-46 |
MS.gene050772 | MS.gene070612 | 0.860168 | 2.49E-63 | -1.69E-46 |
MS.gene05080 | MS.gene070612 | 0.884845 | 1.35E-71 | -1.69E-46 |
MS.gene05081 | MS.gene070612 | 0.861851 | 7.67E-64 | -1.69E-46 |
MS.gene050868 | MS.gene070612 | 0.88501 | 1.17E-71 | -1.69E-46 |
MS.gene050871 | MS.gene070612 | 0.88483 | 1.37E-71 | -1.69E-46 |
MS.gene050904 | MS.gene070612 | 0.873436 | 1.47E-67 | -1.69E-46 |
MS.gene050950 | MS.gene070612 | 0.892097 | 2.17E-74 | -1.69E-46 |
MS.gene050986 | MS.gene070612 | 0.824223 | 9.07E-54 | -1.69E-46 |
MS.gene05100 | MS.gene070612 | 0.831971 | 1.23E-55 | -1.69E-46 |
MS.gene05105 | MS.gene070612 | 0.804084 | 2.56E-49 | -1.69E-46 |
MS.gene051138 | MS.gene070612 | -0.818912 | 1.53E-52 | -1.69E-46 |
MS.gene051268 | MS.gene070612 | 0.834666 | 2.63E-56 | -1.69E-46 |
MS.gene051317 | MS.gene070612 | 0.848652 | 5.35E-60 | -1.69E-46 |
MS.gene051387 | MS.gene070612 | 0.8008 | 1.22E-48 | -1.69E-46 |
MS.gene051438 | MS.gene070612 | 0.811166 | 8.02E-51 | -1.69E-46 |
MS.gene051551 | MS.gene070612 | 0.808141 | 3.58E-50 | -1.69E-46 |
MS.gene051617 | MS.gene070612 | 0.801327 | 9.49E-49 | -1.69E-46 |
MS.gene051651 | MS.gene070612 | -0.843908 | 1.05E-58 | -1.69E-46 |
MS.gene051666 | MS.gene070612 | 0.839495 | 1.53E-57 | -1.69E-46 |
MS.gene051734 | MS.gene070612 | 0.83181 | 1.35E-55 | -1.69E-46 |
MS.gene051810 | MS.gene070612 | 0.801065 | 1.07E-48 | -1.69E-46 |
MS.gene051838 | MS.gene070612 | 0.886503 | 3.23E-72 | -1.69E-46 |
MS.gene051858 | MS.gene070612 | 0.811856 | 5.68E-51 | -1.69E-46 |
MS.gene051874 | MS.gene070612 | 0.826286 | 2.95E-54 | -1.69E-46 |
MS.gene051941 | MS.gene070612 | 0.846794 | 1.74E-59 | -1.69E-46 |
MS.gene052129 | MS.gene070612 | -0.835619 | 1.51E-56 | -1.69E-46 |
MS.gene052164 | MS.gene070612 | 0.877394 | 6.51E-69 | -1.69E-46 |
MS.gene052346 | MS.gene070612 | 0.801386 | 9.23E-49 | -1.69E-46 |
MS.gene05240 | MS.gene070612 | -0.829626 | 4.63E-55 | -1.69E-46 |
MS.gene052482 | MS.gene070612 | 0.851702 | 7.47E-61 | -1.69E-46 |
MS.gene052486 | MS.gene070612 | 0.860136 | 2.55E-63 | -1.69E-46 |
MS.gene052494 | MS.gene070612 | -0.833041 | 6.70E-56 | -1.69E-46 |
MS.gene052501 | MS.gene070612 | 0.835576 | 1.55E-56 | -1.69E-46 |
MS.gene052503 | MS.gene070612 | 0.876542 | 1.29E-68 | -1.69E-46 |
MS.gene052505 | MS.gene070612 | 0.829671 | 4.52E-55 | -1.69E-46 |
MS.gene052506 | MS.gene070612 | 0.805256 | 1.46E-49 | -1.69E-46 |
MS.gene052606 | MS.gene070612 | -0.82745 | 1.55E-54 | -1.69E-46 |
MS.gene052615 | MS.gene070612 | 0.853695 | 2.02E-61 | -1.69E-46 |
MS.gene052822 | MS.gene070612 | 0.806052 | 9.92E-50 | -1.69E-46 |
MS.gene052823 | MS.gene070612 | 0.877054 | 8.55E-69 | -1.69E-46 |
MS.gene052825 | MS.gene070612 | 0.873567 | 1.33E-67 | -1.69E-46 |
MS.gene052870 | MS.gene070612 | 0.838326 | 3.07E-57 | -1.69E-46 |
MS.gene052872 | MS.gene070612 | 0.85611 | 4.01E-62 | -1.69E-46 |
MS.gene052966 | MS.gene070612 | 0.861819 | 7.85E-64 | -1.69E-46 |
MS.gene052982 | MS.gene070612 | 0.802586 | 5.23E-49 | -1.69E-46 |
MS.gene053097 | MS.gene070612 | -0.810162 | 1.32E-50 | -1.69E-46 |
MS.gene053104 | MS.gene070612 | 0.802179 | 6.34E-49 | -1.69E-46 |
MS.gene053203 | MS.gene070612 | 0.860744 | 1.67E-63 | -1.69E-46 |
MS.gene053207 | MS.gene070612 | 0.815102 | 1.10E-51 | -1.69E-46 |
MS.gene053213 | MS.gene070612 | 0.842616 | 2.32E-58 | -1.69E-46 |
MS.gene053286 | MS.gene070612 | 0.841936 | 3.51E-58 | -1.69E-46 |
MS.gene053421 | MS.gene070612 | -0.80186 | 7.38E-49 | -1.69E-46 |
MS.gene053436 | MS.gene070612 | 0.835926 | 1.26E-56 | -1.69E-46 |
MS.gene053479 | MS.gene070612 | 0.885493 | 7.76E-72 | -1.69E-46 |
MS.gene053480 | MS.gene070612 | 0.855874 | 4.71E-62 | -1.69E-46 |
MS.gene053574 | MS.gene070612 | 0.86053 | 1.94E-63 | -1.69E-46 |
MS.gene053579 | MS.gene070612 | 0.833621 | 4.80E-56 | -1.69E-46 |
MS.gene053626 | MS.gene070612 | 0.839997 | 1.13E-57 | -1.69E-46 |
MS.gene053632 | MS.gene070612 | 0.849243 | 3.66E-60 | -1.69E-46 |
MS.gene053824 | MS.gene070612 | 0.902921 | 5.91E-79 | -1.69E-46 |
MS.gene053916 | MS.gene070612 | 0.831428 | 1.68E-55 | -1.69E-46 |
MS.gene054003 | MS.gene070612 | 0.803498 | 3.39E-49 | -1.69E-46 |
MS.gene054107 | MS.gene070612 | 0.807986 | 3.87E-50 | -1.69E-46 |
MS.gene054343 | MS.gene070612 | 0.801903 | 7.23E-49 | -1.69E-46 |
MS.gene054344 | MS.gene070612 | 0.846026 | 2.81E-59 | -1.69E-46 |
MS.gene054408 | MS.gene070612 | 0.884672 | 1.57E-71 | -1.69E-46 |
MS.gene054595 | MS.gene070612 | 0.850624 | 1.51E-60 | -1.69E-46 |
MS.gene054600 | MS.gene070612 | 0.859419 | 4.19E-63 | -1.69E-46 |
MS.gene054642 | MS.gene070612 | 0.83716 | 6.12E-57 | -1.69E-46 |
MS.gene054706 | MS.gene070612 | -0.854212 | 1.43E-61 | -1.69E-46 |
MS.gene054707 | MS.gene070612 | -0.809276 | 2.05E-50 | -1.69E-46 |
MS.gene05470 | MS.gene070612 | 0.897379 | 1.49E-76 | -1.69E-46 |
MS.gene054884 | MS.gene070612 | -0.845229 | 4.63E-59 | -1.69E-46 |
MS.gene054927 | MS.gene070612 | 0.848725 | 5.10E-60 | -1.69E-46 |
MS.gene05494 | MS.gene070612 | 0.842158 | 3.07E-58 | -1.69E-46 |
MS.gene054954 | MS.gene070612 | 0.857365 | 1.72E-62 | -1.69E-46 |
MS.gene05505 | MS.gene070612 | 0.816931 | 4.29E-52 | -1.69E-46 |
MS.gene055158 | MS.gene070612 | -0.802132 | 6.49E-49 | -1.69E-46 |
MS.gene055206 | MS.gene070612 | 0.836364 | 9.77E-57 | -1.69E-46 |
MS.gene055212 | MS.gene070612 | 0.801162 | 1.03E-48 | -1.69E-46 |
MS.gene055224 | MS.gene070612 | 0.850147 | 2.05E-60 | -1.69E-46 |
MS.gene055289 | MS.gene070612 | 0.830417 | 2.97E-55 | -1.69E-46 |
MS.gene055362 | MS.gene070612 | 0.860627 | 1.81E-63 | -1.69E-46 |
MS.gene055502 | MS.gene070612 | 0.88642 | 3.47E-72 | -1.69E-46 |
MS.gene055539 | MS.gene070612 | 0.813697 | 2.24E-51 | -1.69E-46 |
MS.gene055577 | MS.gene070612 | 0.891217 | 4.86E-74 | -1.69E-46 |
MS.gene055722 | MS.gene070612 | 0.805246 | 1.46E-49 | -1.69E-46 |
MS.gene055729 | MS.gene070612 | -0.803236 | 3.84E-49 | -1.69E-46 |
MS.gene055730 | MS.gene070612 | -0.807539 | 4.81E-50 | -1.69E-46 |
MS.gene055731 | MS.gene070612 | -0.816656 | 4.94E-52 | -1.69E-46 |
MS.gene055741 | MS.gene070612 | 0.85498 | 8.57E-62 | -1.69E-46 |
MS.gene055744 | MS.gene070612 | 0.8437 | 1.19E-58 | -1.69E-46 |
MS.gene055748 | MS.gene070612 | 0.90341 | 3.57E-79 | -1.69E-46 |
MS.gene055750 | MS.gene070612 | 0.880995 | 3.47E-70 | -1.69E-46 |
MS.gene055751 | MS.gene070612 | 0.89145 | 3.93E-74 | -1.69E-46 |
MS.gene05589 | MS.gene070612 | 0.910092 | 2.76E-82 | -1.69E-46 |
MS.gene055941 | MS.gene070612 | 0.855899 | 4.63E-62 | -1.69E-46 |
MS.gene056040 | MS.gene070612 | 0.845175 | 4.78E-59 | -1.69E-46 |
MS.gene056046 | MS.gene070612 | 0.806745 | 7.08E-50 | -1.69E-46 |
MS.gene056166 | MS.gene070612 | 0.851053 | 1.14E-60 | -1.69E-46 |
MS.gene056266 | MS.gene070612 | 0.806867 | 6.68E-50 | -1.69E-46 |
MS.gene056283 | MS.gene070612 | 0.83072 | 2.50E-55 | -1.69E-46 |
MS.gene056387 | MS.gene070612 | 0.860106 | 2.60E-63 | -1.69E-46 |
MS.gene056446 | MS.gene070612 | 0.848262 | 6.85E-60 | -1.69E-46 |
MS.gene056449 | MS.gene070612 | 0.804287 | 2.32E-49 | -1.69E-46 |
MS.gene056504 | MS.gene070612 | 0.882552 | 9.47E-71 | -1.69E-46 |
MS.gene056510 | MS.gene070612 | 0.860731 | 1.68E-63 | -1.69E-46 |
MS.gene056590 | MS.gene070612 | -0.80885 | 2.53E-50 | -1.69E-46 |
MS.gene056591 | MS.gene070612 | -0.810917 | 9.08E-51 | -1.69E-46 |
MS.gene056610 | MS.gene070612 | 0.814512 | 1.48E-51 | -1.69E-46 |
MS.gene056618 | MS.gene070612 | -0.80269 | 4.98E-49 | -1.69E-46 |
MS.gene056657 | MS.gene070612 | 0.852405 | 4.72E-61 | -1.69E-46 |
MS.gene056688 | MS.gene070612 | -0.802941 | 4.42E-49 | -1.69E-46 |
MS.gene056692 | MS.gene070612 | 0.850591 | 1.54E-60 | -1.69E-46 |
MS.gene056694 | MS.gene070612 | -0.824741 | 6.85E-54 | -1.69E-46 |
MS.gene056697 | MS.gene070612 | -0.828993 | 6.60E-55 | -1.69E-46 |
MS.gene056856 | MS.gene070612 | -0.812315 | 4.51E-51 | -1.69E-46 |
MS.gene056877 | MS.gene070612 | 0.811139 | 8.13E-51 | -1.69E-46 |
MS.gene056946 | MS.gene070612 | 0.826139 | 3.20E-54 | -1.69E-46 |
MS.gene056947 | MS.gene070612 | 0.800971 | 1.12E-48 | -1.69E-46 |
MS.gene057019 | MS.gene070612 | 0.817141 | 3.85E-52 | -1.69E-46 |
MS.gene057048 | MS.gene070612 | 0.822791 | 1.96E-53 | -1.69E-46 |
MS.gene057076 | MS.gene070612 | 0.848533 | 5.77E-60 | -1.69E-46 |
MS.gene057332 | MS.gene070612 | 0.833161 | 6.25E-56 | -1.69E-46 |
MS.gene057416 | MS.gene070612 | 0.817722 | 2.85E-52 | -1.69E-46 |
MS.gene057658 | MS.gene070612 | 0.88387 | 3.11E-71 | -1.69E-46 |
MS.gene057734 | MS.gene070612 | 0.80434 | 2.26E-49 | -1.69E-46 |
MS.gene057831 | MS.gene070612 | 0.882985 | 6.58E-71 | -1.69E-46 |
MS.gene057856 | MS.gene070612 | 0.800192 | 1.62E-48 | -1.69E-46 |
MS.gene057857 | MS.gene070612 | 0.823382 | 1.43E-53 | -1.69E-46 |
MS.gene05787 | MS.gene070612 | 0.865866 | 4.33E-65 | -1.69E-46 |
MS.gene058130 | MS.gene070612 | 0.849504 | 3.10E-60 | -1.69E-46 |
MS.gene058157 | MS.gene070612 | 0.842966 | 1.87E-58 | -1.69E-46 |
MS.gene058334 | MS.gene070612 | -0.854973 | 8.61E-62 | -1.69E-46 |
MS.gene058338 | MS.gene070612 | 0.864723 | 9.90E-65 | -1.69E-46 |
MS.gene058376 | MS.gene070612 | 0.812013 | 5.25E-51 | -1.69E-46 |
MS.gene05837 | MS.gene070612 | 0.910326 | 2.12E-82 | -1.69E-46 |
MS.gene058418 | MS.gene070612 | -0.825651 | 4.17E-54 | -1.69E-46 |
MS.gene058419 | MS.gene070612 | 0.869038 | 4.18E-66 | -1.69E-46 |
MS.gene058444 | MS.gene070612 | 0.827461 | 1.55E-54 | -1.69E-46 |
MS.gene058448 | MS.gene070612 | 0.818662 | 1.74E-52 | -1.69E-46 |
MS.gene058544 | MS.gene070612 | 0.879938 | 8.28E-70 | -1.69E-46 |
MS.gene058603 | MS.gene070612 | -0.821163 | 4.67E-53 | -1.69E-46 |
MS.gene058700 | MS.gene070612 | 0.804769 | 1.84E-49 | -1.69E-46 |
MS.gene058723 | MS.gene070612 | 0.816177 | 6.32E-52 | -1.69E-46 |
MS.gene058773 | MS.gene070612 | 0.864872 | 8.90E-65 | -1.69E-46 |
MS.gene058838 | MS.gene070612 | 0.901699 | 2.06E-78 | -1.69E-46 |
MS.gene059022 | MS.gene070612 | 0.858589 | 7.42E-63 | -1.69E-46 |
MS.gene059023 | MS.gene070612 | 0.911769 | 4.18E-83 | -1.69E-46 |
MS.gene05912 | MS.gene070612 | 0.820197 | 7.79E-53 | -1.69E-46 |
MS.gene05913 | MS.gene070612 | 0.840723 | 7.32E-58 | -1.69E-46 |
MS.gene05914 | MS.gene070612 | 0.871584 | 6.11E-67 | -1.69E-46 |
MS.gene05926 | MS.gene070612 | -0.817158 | 3.81E-52 | -1.69E-46 |
MS.gene059303 | MS.gene070612 | 0.806848 | 6.74E-50 | -1.69E-46 |
MS.gene05934 | MS.gene070612 | 0.83105 | 2.08E-55 | -1.69E-46 |
MS.gene059526 | MS.gene070612 | -0.834143 | 3.55E-56 | -1.69E-46 |
MS.gene05960 | MS.gene070612 | -0.840592 | 7.93E-58 | -1.69E-46 |
MS.gene059667 | MS.gene070612 | 0.883757 | 3.42E-71 | -1.69E-46 |
MS.gene059677 | MS.gene070612 | 0.871627 | 5.92E-67 | -1.69E-46 |
MS.gene059718 | MS.gene070612 | 0.869731 | 2.49E-66 | -1.69E-46 |
MS.gene059756 | MS.gene070612 | 0.852749 | 3.76E-61 | -1.69E-46 |
MS.gene059801 | MS.gene070612 | 0.841327 | 5.08E-58 | -1.69E-46 |
MS.gene059837 | MS.gene070612 | 0.815666 | 8.23E-52 | -1.69E-46 |
MS.gene059865 | MS.gene070612 | 0.853873 | 1.79E-61 | -1.69E-46 |
MS.gene059902 | MS.gene070612 | 0.805654 | 1.20E-49 | -1.69E-46 |
MS.gene059953 | MS.gene070612 | -0.802297 | 6.00E-49 | -1.69E-46 |
MS.gene059955 | MS.gene070612 | -0.80832 | 3.28E-50 | -1.69E-46 |
MS.gene06000 | MS.gene070612 | 0.881597 | 2.10E-70 | -1.69E-46 |
MS.gene060087 | MS.gene070612 | -0.816271 | 6.03E-52 | -1.69E-46 |
MS.gene06027 | MS.gene070612 | 0.859338 | 4.43E-63 | -1.69E-46 |
MS.gene060593 | MS.gene070612 | -0.815603 | 8.50E-52 | -1.69E-46 |
MS.gene060595 | MS.gene070612 | -0.825367 | 4.87E-54 | -1.69E-46 |
MS.gene060703 | MS.gene070612 | 0.833718 | 4.54E-56 | -1.69E-46 |
MS.gene060762 | MS.gene070612 | 0.888303 | 6.66E-73 | -1.69E-46 |
MS.gene060778 | MS.gene070612 | 0.856378 | 3.35E-62 | -1.69E-46 |
MS.gene06077 | MS.gene070612 | 0.881529 | 2.23E-70 | -1.69E-46 |
MS.gene060823 | MS.gene070612 | -0.80055 | 1.37E-48 | -1.69E-46 |
MS.gene060835 | MS.gene070612 | 0.822959 | 1.79E-53 | -1.69E-46 |
MS.gene06092 | MS.gene070612 | 0.871018 | 9.40E-67 | -1.69E-46 |
MS.gene06097 | MS.gene070612 | 0.831494 | 1.62E-55 | -1.69E-46 |
MS.gene060982 | MS.gene070612 | 0.88877 | 4.40E-73 | -1.69E-46 |
MS.gene061044 | MS.gene070612 | -0.826739 | 2.30E-54 | -1.69E-46 |
MS.gene061150 | MS.gene070612 | 0.861691 | 8.58E-64 | -1.69E-46 |
MS.gene061231 | MS.gene070612 | 0.831442 | 1.67E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070612.t1 | MTR_8g464410 | 95.495 | 333 | 9 | 1 | 6 | 338 | 58 | 384 | 0.0 | 597 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070612.t1 | AT5G54290 | 71.053 | 342 | 77 | 5 | 15 | 338 | 18 | 355 | 5.11e-144 | 411 |
MS.gene070612.t1 | AT5G54290 | 70.968 | 341 | 78 | 5 | 15 | 338 | 18 | 354 | 2.74e-143 | 409 |
Find 83 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAGTTTGGCTGTAATTTA+TGG | 0.138835 | 8.1:+49763120 | MS.gene070612:intron |
AAATTGGCGGCAACTGATTT+TGG | 0.158615 | 8.1:-49764631 | None:intergenic |
TTCTGGTTTGGCTGTAATTA+TGG | 0.159872 | 8.1:+49764158 | MS.gene070612:CDS |
TCAGAAACAAATTACCTTAT+AGG | 0.167684 | 8.1:-49765910 | None:intergenic |
TCTTCTTCCTGTCAGGTTAT+TGG | 0.199637 | 8.1:+49764021 | MS.gene070612:intron |
TATAATATGGCAGGGGCTTT+TGG | 0.205217 | 8.1:+49763280 | MS.gene070612:intron |
GGATTACCTGTGGCTGCTTC+TGG | 0.231671 | 8.1:+49764141 | MS.gene070612:CDS |
TGACTTACTTGATGGAAAAT+TGG | 0.255517 | 8.1:-49764647 | None:intergenic |
ATACATCTCTCCCTTACTTT+TGG | 0.275809 | 8.1:+49765715 | MS.gene070612:CDS |
ACCTGTTCTAGCCACCCTTT+TGG | 0.292716 | 8.1:+49764807 | MS.gene070612:CDS |
TCTGGTTTGGCTGTAATTAT+GGG | 0.303888 | 8.1:+49764159 | MS.gene070612:CDS |
ACCTGTGGCTGCTTCTGGTT+TGG | 0.311226 | 8.1:+49764146 | MS.gene070612:CDS |
GCAGTTTGGCTGTAATTTAT+GGG | 0.315183 | 8.1:+49763121 | MS.gene070612:intron |
GGAAAGGCTTATGGACAAAT+TGG | 0.328498 | 8.1:+49764114 | MS.gene070612:CDS |
TACATTACCATTGTGGCAGC+TGG | 0.360323 | 8.1:-49766113 | None:intergenic |
AATAGTATTATGACATTCAT+TGG | 0.361793 | 8.1:+49762529 | MS.gene070612:CDS |
ACAGGCCAATGAAGCAGTTC+TGG | 0.364928 | 8.1:+49762973 | MS.gene070612:CDS |
CAGCATGGATCAATCCTATA+AGG | 0.383503 | 8.1:+49765896 | MS.gene070612:CDS |
TTGGTCCAGAACTGCTTCAT+TGG | 0.383991 | 8.1:-49762978 | None:intergenic |
AAAAGAAGCAGCCAAAAGTA+AGG | 0.394341 | 8.1:-49765726 | None:intergenic |
GGTGTGCAAGCATACCTGGC+TGG | 0.396078 | 8.1:+49764748 | MS.gene070612:intron |
ACTCAACTCAACCCGATTCA+TGG | 0.401431 | 8.1:+49762180 | MS.gene070612:CDS |
TTTGTATGGTTACCATGAAT+CGG | 0.407681 | 8.1:-49762192 | None:intergenic |
GGAGGCATCGGTGACTGGTT+TGG | 0.422411 | 8.1:+49762926 | MS.gene070612:CDS |
CCCAAAAGGGTGGCTAGAAC+AGG | 0.429955 | 8.1:-49764808 | None:intergenic |
TGCTTCATTGGCCTGTTGTC+CGG | 0.430538 | 8.1:-49762966 | None:intergenic |
TTTGTACAGAATCCAGTGAT+TGG | 0.432285 | 8.1:+49765662 | MS.gene070612:intron |
AGCAAGCTGCCTCCAATCAC+TGG | 0.441209 | 8.1:-49765674 | None:intergenic |
TTGTATGGTTACCATGAATC+GGG | 0.454052 | 8.1:-49762191 | None:intergenic |
GTTAGGTGTGCAAGCATACC+TGG | 0.458793 | 8.1:+49764744 | MS.gene070612:intron |
GTGTATATACCTTCTTAGAT+AGG | 0.464767 | 8.1:+49766084 | MS.gene070612:CDS |
ACATTCATTGGTGGATTCAC+AGG | 0.469988 | 8.1:+49762541 | MS.gene070612:CDS |
CTGAACATGAAAATTGTCTT+CGG | 0.471865 | 8.1:+49762485 | MS.gene070612:CDS |
CTGATGGAGGCATCGGTGAC+TGG | 0.471880 | 8.1:+49762921 | MS.gene070612:CDS |
CTAATGTGGTTGCAAGTCCC+AGG | 0.485700 | 8.1:-49764062 | None:intergenic |
CGGTTGAAGTCGAAGATCAA+TGG | 0.491192 | 8.1:+49762505 | MS.gene070612:CDS |
ATGCAGCGACATATCCCAAA+AGG | 0.493924 | 8.1:-49764822 | None:intergenic |
CGGTAACACACTAAGCGTAC+AGG | 0.494081 | 8.1:-49763169 | None:intergenic |
CACTAAGCGTACAGGGAGAA+AGG | 0.494224 | 8.1:-49763161 | None:intergenic |
TTGGCTGTAATTTATGGGGC+AGG | 0.501817 | 8.1:+49763126 | MS.gene070612:CDS |
GACAGCGGAGCAATGCTGTT+AGG | 0.503054 | 8.1:+49766056 | MS.gene070612:intron |
CCAATGTAACCGAGAGTTAG+CGG | 0.511934 | 8.1:-49763189 | None:intergenic |
CTTACTTGATGGAAAATTGG+CGG | 0.519821 | 8.1:-49764644 | None:intergenic |
AGTGCACCTAGTGAAACTTA+AGG | 0.525530 | 8.1:-49763008 | None:intergenic |
AAGCAGCCACAGGTAATCCT+TGG | 0.531751 | 8.1:-49764137 | None:intergenic |
GTGTGCAAGCATACCTGGCT+GGG | 0.532324 | 8.1:+49764749 | MS.gene070612:CDS |
ATCAAAACTGTCGAAGAATG+AGG | 0.532805 | 8.1:-49764608 | None:intergenic |
CAGTTTGGCTGTAATTTATG+GGG | 0.539826 | 8.1:+49763122 | MS.gene070612:intron |
TGAAACTTAAGGAGGATAGT+TGG | 0.542202 | 8.1:-49762997 | None:intergenic |
CCGCTAACTCTCGGTTACAT+TGG | 0.544941 | 8.1:+49763189 | MS.gene070612:CDS |
ACTTTGGCTGATGGAGGCAT+CGG | 0.545892 | 8.1:+49762914 | MS.gene070612:CDS |
TTTGTTTCAGTACCTCAAGA+AGG | 0.547535 | 8.1:-49764188 | None:intergenic |
GGCATCGGTGACTGGTTTGG+AGG | 0.548333 | 8.1:+49762929 | MS.gene070612:CDS |
AGTATTATGACATTCATTGG+TGG | 0.549190 | 8.1:+49762532 | MS.gene070612:CDS |
AAGCGTACAGGGAGAAAGGC+TGG | 0.557765 | 8.1:-49763157 | None:intergenic |
ACATTACCATTGTGGCAGCT+GGG | 0.561699 | 8.1:-49766112 | None:intergenic |
AAAGAAGCAGCCAAAAGTAA+GGG | 0.563088 | 8.1:-49765725 | None:intergenic |
CGTTTCGCAAGTACTCAGCA+TGG | 0.564228 | 8.1:+49765881 | MS.gene070612:CDS |
ACATTAGCACTGCTCGGCGT+AGG | 0.564422 | 8.1:+49764078 | MS.gene070612:CDS |
TCAAAACTGTCGAAGAATGA+GGG | 0.564734 | 8.1:-49764607 | None:intergenic |
ATGCAAATGTAAGCCCAGCC+AGG | 0.569028 | 8.1:-49764762 | None:intergenic |
GTACAGAATCCAGTGATTGG+AGG | 0.569251 | 8.1:+49765665 | MS.gene070612:intron |
TGGGAACAGCCTATCTAAGA+AGG | 0.570878 | 8.1:-49766093 | None:intergenic |
TACGCCGAGCAGTGCTAATG+TGG | 0.571043 | 8.1:-49764076 | None:intergenic |
AGTGTGTTACCGCTAACTCT+CGG | 0.572351 | 8.1:+49763180 | MS.gene070612:CDS |
GCTTATGGACAAATTGGCCA+AGG | 0.583986 | 8.1:+49764120 | MS.gene070612:CDS |
GGGATATGTCGCTGCATCCA+AGG | 0.585622 | 8.1:+49764828 | MS.gene070612:CDS |
TATCCTCCTTAAGTTTCACT+AGG | 0.587221 | 8.1:+49763002 | MS.gene070612:CDS |
TGCAGCGACATATCCCAAAA+GGG | 0.588774 | 8.1:-49764821 | None:intergenic |
GGTAACACACTAAGCGTACA+GGG | 0.590535 | 8.1:-49763168 | None:intergenic |
TATGGGTCTGAACCTTCTTG+AGG | 0.597434 | 8.1:+49764176 | MS.gene070612:CDS |
GGAGCAATGCTGTTAGGAGG+TGG | 0.599846 | 8.1:+49766062 | MS.gene070612:CDS |
GCCAAACCAGAAGCAGCCAC+AGG | 0.604082 | 8.1:-49764147 | None:intergenic |
AGCGGAGCAATGCTGTTAGG+AGG | 0.617303 | 8.1:+49766059 | MS.gene070612:intron |
GCTGTTCCCAGCTGCCACAA+TGG | 0.640005 | 8.1:+49766106 | MS.gene070612:CDS |
AACAGGTGTACTGCATGGTG+AGG | 0.645829 | 8.1:-49764791 | None:intergenic |
TAATGTGGTTGCAAGTCCCA+GGG | 0.648436 | 8.1:-49764061 | None:intergenic |
GCAACCACATTAGCACTGCT+CGG | 0.648831 | 8.1:+49764072 | MS.gene070612:CDS |
CAAAACTGTCGAAGAATGAG+GGG | 0.666686 | 8.1:-49764606 | None:intergenic |
GCACCTAGTGAAACTTAAGG+AGG | 0.685235 | 8.1:-49763005 | None:intergenic |
AGCGACATATCCCAAAAGGG+TGG | 0.693602 | 8.1:-49764818 | None:intergenic |
AATTGGCCAAGGATTACCTG+TGG | 0.714404 | 8.1:+49764131 | MS.gene070612:CDS |
GCTAGAACAGGTGTACTGCA+TGG | 0.719252 | 8.1:-49764796 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAATTTTTTTTTGGTTAT+AGG | + | chr8.1:49762430-49762449 | MS.gene070612:intron | 10.0% |
!! | AAAAATTAAAAAAATCTCCA+AGG | - | chr8.1:49762420-49762439 | None:intergenic | 15.0% |
!! | AAACAAATAAAAAGAAACAT+TGG | - | chr8.1:49762810-49762829 | None:intergenic | 15.0% |
!! | AATCTAAATCTGTTATAATA+TGG | + | chr8.1:49763267-49763286 | MS.gene070612:intron | 15.0% |
!! | ATAAGAAGAATAATATCATA+TGG | - | chr8.1:49763353-49763372 | None:intergenic | 15.0% |
!! | TCTTGATGTAAAAATTTATA+TGG | + | chr8.1:49764877-49764896 | MS.gene070612:intron | 15.0% |
!!! | ATTTATTTGAGCTTATTTTA+CGG | - | chr8.1:49762377-49762396 | None:intergenic | 15.0% |
!!! | CTTTTTATTTGTTTATTTTC+CGG | + | chr8.1:49762816-49762835 | MS.gene070612:intron | 15.0% |
!!! | GTGTTATTCATTAAATTTTT+TGG | + | chr8.1:49764298-49764317 | MS.gene070612:intron | 15.0% |
!! | AACTAATAAGCAAATAAAAC+TGG | - | chr8.1:49764931-49764950 | None:intergenic | 20.0% |
!! | AATAGTATTATGACATTCAT+TGG | + | chr8.1:49762529-49762548 | MS.gene070612:CDS | 20.0% |
!! | AATGGTAGAAATAAATCATT+CGG | - | chr8.1:49763044-49763063 | None:intergenic | 20.0% |
!! | AATTTATATTCCGTGAAAAT+AGG | - | chr8.1:49763630-49763649 | None:intergenic | 20.0% |
!! | ACAATAAAAAATTCTTCGAA+TGG | + | chr8.1:49764517-49764536 | MS.gene070612:intron | 20.0% |
!! | AGAAAATCAATCTTCAAATA+GGG | - | chr8.1:49763391-49763410 | None:intergenic | 20.0% |
!! | ATAATTGAAACTTGTGTTTA+TGG | + | chr8.1:49763071-49763090 | MS.gene070612:intron | 20.0% |
!! | ATTCATACATGAAATGTTAT+TGG | - | chr8.1:49763686-49763705 | None:intergenic | 20.0% |
!! | GTAAAAATTTATATGGTGAT+TGG | + | chr8.1:49764884-49764903 | MS.gene070612:intron | 20.0% |
!! | TAATGAAAAAGAATAATGTC+CGG | - | chr8.1:49765441-49765460 | None:intergenic | 20.0% |
!! | TCTTATTACTAATGTACTAA+GGG | + | chr8.1:49763410-49763429 | MS.gene070612:intron | 20.0% |
!!! | AAAAGTCGTTTTTAATACAT+AGG | - | chr8.1:49763943-49763962 | None:intergenic | 20.0% |
!!! | AAAATACTGTTATTTAGAAG+AGG | - | chr8.1:49764339-49764358 | None:intergenic | 20.0% |
!!! | AAGAATTGTGTTTTTTAATC+AGG | + | chr8.1:49762871-49762890 | MS.gene070612:intron | 20.0% |
!!! | CTTCTAAATAACAGTATTTT+AGG | + | chr8.1:49764339-49764358 | MS.gene070612:intron | 20.0% |
!!! | CTTCTTATTATCCATTTTTA+TGG | + | chr8.1:49763365-49763384 | MS.gene070612:intron | 20.0% |
!!! | GAAAATTTTCTTATGATTCA+TGG | + | chr8.1:49765568-49765587 | MS.gene070612:intron | 20.0% |
!!! | GATATTTGTATTTGTTGTAT+AGG | + | chr8.1:49763847-49763866 | MS.gene070612:intron | 20.0% |
!!! | TAATATCATATGGATTAACT+CGG | - | chr8.1:49763343-49763362 | None:intergenic | 20.0% |
!!! | TAGTCATTTTAAAACGTTTT+TGG | - | chr8.1:49763246-49763265 | None:intergenic | 20.0% |
!!! | TGAATCATAAGAAAATTTTC+CGG | - | chr8.1:49765568-49765587 | None:intergenic | 20.0% |
!!! | TTTTTTTTTGTGTTACTGAT+TGG | + | chr8.1:49762634-49762653 | MS.gene070612:intron | 20.0% |
! | AAAAGATTAAATTCACGATC+CGG | + | chr8.1:49765546-49765565 | MS.gene070612:intron | 25.0% |
! | AAATAACTTCTTCTTATCCT+TGG | + | chr8.1:49762400-49762419 | MS.gene070612:intron | 25.0% |
! | AAATCTGTTATAATATGGCA+GGG | + | chr8.1:49763272-49763291 | MS.gene070612:intron | 25.0% |
! | AGTAAATTCACCAAATTGTT+TGG | - | chr8.1:49762228-49762247 | None:intergenic | 25.0% |
! | ATAGGTTCTATAATTTGGAT+AGG | + | chr8.1:49765216-49765235 | MS.gene070612:intron | 25.0% |
! | CTCTTATTACTAATGTACTA+AGG | + | chr8.1:49763409-49763428 | MS.gene070612:intron | 25.0% |
! | GAGAAAATCAATCTTCAAAT+AGG | - | chr8.1:49763392-49763411 | None:intergenic | 25.0% |
! | GTTTCAATTATTAGCTGAAA+TGG | - | chr8.1:49763062-49763081 | None:intergenic | 25.0% |
! | TAAATCTGTTATAATATGGC+AGG | + | chr8.1:49763271-49763290 | MS.gene070612:intron | 25.0% |
! | TACAAGCTATCCAATTAATT+AGG | - | chr8.1:49765997-49766016 | None:intergenic | 25.0% |
! | TATCTTAAAGAAACGCTTTA+AGG | - | chr8.1:49765802-49765821 | None:intergenic | 25.0% |
! | TCAGAAACAAATTACCTTAT+AGG | - | chr8.1:49765913-49765932 | None:intergenic | 25.0% |
! | TGAATATTGTTGTAAACACA+AGG | - | chr8.1:49764257-49764276 | None:intergenic | 25.0% |
! | TGAATGAGAATAAAAGAGAA+AGG | - | chr8.1:49763995-49764014 | None:intergenic | 25.0% |
! | TTAGAAGAGGTTGAAAAAAA+AGG | - | chr8.1:49764326-49764345 | None:intergenic | 25.0% |
! | TTTACATCAAGAAGAAACAT+TGG | - | chr8.1:49764869-49764888 | None:intergenic | 25.0% |
! | TTTCATTCAAATTAACCACT+AGG | - | chr8.1:49762594-49762613 | None:intergenic | 25.0% |
!! | AATATCATATGGATTAACTC+GGG | - | chr8.1:49763342-49763361 | None:intergenic | 25.0% |
!! | GTTTTCGACAAATTCTATTT+GGG | + | chr8.1:49763751-49763770 | MS.gene070612:intron | 25.0% |
!!! | ATGTTCAGTAGTAACTTTTT+TGG | - | chr8.1:49762473-49762492 | None:intergenic | 25.0% |
!!! | CACATTTAGTTCTTTCAATA+TGG | + | chr8.1:49764683-49764702 | MS.gene070612:intron | 25.0% |
!!! | TGTGTTTTTTAATCAGGAAA+TGG | + | chr8.1:49762877-49762896 | MS.gene070612:intron | 25.0% |
!!! | TGTTGTTGTTTTACGTTTTT+CGG | + | chr8.1:49763218-49763237 | MS.gene070612:intron | 25.0% |
AATCTGTTATAATATGGCAG+GGG | + | chr8.1:49763273-49763292 | MS.gene070612:intron | 30.0% | |
ACACAAAGTTGACAAAAAAG+TGG | - | chr8.1:49765416-49765435 | None:intergenic | 30.0% | |
AGTATTATGACATTCATTGG+TGG | + | chr8.1:49762532-49762551 | MS.gene070612:CDS | 30.0% | |
ATGTCAAATGCTTAGATGTT+TGG | + | chr8.1:49763585-49763604 | MS.gene070612:intron | 30.0% | |
ATTGAAGCGTGAGAAAAAAT+CGG | - | chr8.1:49765337-49765356 | None:intergenic | 30.0% | |
CATGAACAAATTCTACTGTT+AGG | + | chr8.1:49764727-49764746 | MS.gene070612:intron | 30.0% | |
CTATCCAATTAATTAGGAAG+TGG | - | chr8.1:49765991-49766010 | None:intergenic | 30.0% | |
CTGAACATGAAAATTGTCTT+CGG | + | chr8.1:49762485-49762504 | MS.gene070612:CDS | 30.0% | |
GAGTAAAAGAAACTACATCT+TGG | - | chr8.1:49764390-49764409 | None:intergenic | 30.0% | |
GTAAGTTTAAATGTCTCTGT+TGG | + | chr8.1:49762721-49762740 | MS.gene070612:intron | 30.0% | |
GTAGAAGACATTAATGCAAA+AGG | - | chr8.1:49762772-49762791 | None:intergenic | 30.0% | |
GTATCCACTTCCTAATTAAT+TGG | + | chr8.1:49765984-49766003 | MS.gene070612:intron | 30.0% | |
GTGACTAAATATGCAAATCA+TGG | - | chr8.1:49765614-49765633 | None:intergenic | 30.0% | |
GTGTATATACCTTCTTAGAT+AGG | + | chr8.1:49766084-49766103 | MS.gene070612:CDS | 30.0% | |
TCTTATTCAACTTTGCAGTT+TGG | + | chr8.1:49763107-49763126 | MS.gene070612:intron | 30.0% | |
TGACTTACTTGATGGAAAAT+TGG | - | chr8.1:49764650-49764669 | None:intergenic | 30.0% | |
TGATCTGCGAAAAAAATTCA+AGG | - | chr8.1:49764573-49764592 | None:intergenic | 30.0% | |
TTACTTACGTTTGCATATCA+AGG | + | chr8.1:49765035-49765054 | MS.gene070612:intron | 30.0% | |
TTCAAATAGGGCCATAAAAA+TGG | - | chr8.1:49763379-49763398 | None:intergenic | 30.0% | |
TTTGTATGGTTACCATGAAT+CGG | - | chr8.1:49762195-49762214 | None:intergenic | 30.0% | |
! | AAGAAACATTGGTTACTAAC+AGG | - | chr8.1:49764858-49764877 | None:intergenic | 30.0% |
! | AATATTTTCAGCTGCACAAT+TGG | + | chr8.1:49762675-49762694 | MS.gene070612:intron | 30.0% |
! | ACATGAAATGTTATTGGTCT+TGG | - | chr8.1:49763680-49763699 | None:intergenic | 30.0% |
! | GGTTTTCGACAAATTCTATT+TGG | + | chr8.1:49763750-49763769 | MS.gene070612:intron | 30.0% |
! | GTAAAGACTAAACAGAGTTT+TGG | - | chr8.1:49765184-49765203 | None:intergenic | 30.0% |
! | TCAATGTTTTCTTAACCTAG+TGG | + | chr8.1:49762576-49762595 | MS.gene070612:intron | 30.0% |
! | TGCAGTTCAACTTTTCTTTT+AGG | + | chr8.1:49762286-49762305 | MS.gene070612:intron | 30.0% |
! | TTTGGAGTTTCTAAGTATGA+AGG | + | chr8.1:49765277-49765296 | MS.gene070612:intron | 30.0% |
! | TTTTGTTAGCTGCATATTTG+AGG | + | chr8.1:49763648-49763667 | MS.gene070612:intron | 30.0% |
!! | AGGTGAAAGGTACTAATATA+TGG | + | chr8.1:49763495-49763514 | MS.gene070612:intron | 30.0% |
!! | ATAAAACTGGTTTACCCTTT+TGG | - | chr8.1:49764918-49764937 | None:intergenic | 30.0% |
!! | ATCGGTCAAATCGATTTTAT+TGG | + | chr8.1:49764985-49765004 | MS.gene070612:intron | 30.0% |
!!! | TTCAGTAGTAACTTTTTTGG+TGG | - | chr8.1:49762470-49762489 | None:intergenic | 30.0% |
AAAAGAAGCAGCCAAAAGTA+AGG | - | chr8.1:49765729-49765748 | None:intergenic | 35.0% | |
AAAGAAGCAGCCAAAAGTAA+GGG | - | chr8.1:49765728-49765747 | None:intergenic | 35.0% | |
AAGCAATGTCTCGCATAATT+TGG | + | chr8.1:49765369-49765388 | MS.gene070612:intron | 35.0% | |
ACCCAATCAATACAAATCTC+CGG | + | chr8.1:49765130-49765149 | MS.gene070612:intron | 35.0% | |
AGTCACTCTTATGCAAATGA+AGG | + | chr8.1:49765628-49765647 | MS.gene070612:intron | 35.0% | |
ATCAAAACTGTCGAAGAATG+AGG | - | chr8.1:49764611-49764630 | None:intergenic | 35.0% | |
CAGTTTGGCTGTAATTTATG+GGG | + | chr8.1:49763122-49763141 | MS.gene070612:intron | 35.0% | |
CGAGGATAGGTTCTATAATT+TGG | + | chr8.1:49765211-49765230 | MS.gene070612:intron | 35.0% | |
CTCACATCTTCCAAACAATT+TGG | + | chr8.1:49762215-49762234 | MS.gene070612:intron | 35.0% | |
CTTACTTGATGGAAAATTGG+CGG | - | chr8.1:49764647-49764666 | None:intergenic | 35.0% | |
GAAAAGTGATCTCACAGATT+CGG | - | chr8.1:49764215-49764234 | None:intergenic | 35.0% | |
GAAAGCAAGCTCTGTAAATA+CGG | - | chr8.1:49765862-49765881 | None:intergenic | 35.0% | |
GAATAAAAGAGAAAGGCGAA+TGG | - | chr8.1:49763988-49764007 | None:intergenic | 35.0% | |
GATTGGAAAAAGAGCCAAAA+GGG | + | chr8.1:49764901-49764920 | MS.gene070612:intron | 35.0% | |
GCAGTTTGGCTGTAATTTAT+GGG | + | chr8.1:49763121-49763140 | MS.gene070612:intron | 35.0% | |
GGTAGAAATAAATCATTCGG+CGG | - | chr8.1:49763041-49763060 | None:intergenic | 35.0% | |
GTTTCTAAGTATGAAGGATC+CGG | + | chr8.1:49765283-49765302 | MS.gene070612:intron | 35.0% | |
TATCCTCCTTAAGTTTCACT+AGG | + | chr8.1:49763002-49763021 | MS.gene070612:CDS | 35.0% | |
TCAAAACTGTCGAAGAATGA+GGG | - | chr8.1:49764610-49764629 | None:intergenic | 35.0% | |
TGAAACTTAAGGAGGATAGT+TGG | - | chr8.1:49763000-49763019 | None:intergenic | 35.0% | |
TGATTGGAAAAAGAGCCAAA+AGG | + | chr8.1:49764900-49764919 | MS.gene070612:intron | 35.0% | |
TGCAGTTTGGCTGTAATTTA+TGG | + | chr8.1:49763120-49763139 | MS.gene070612:intron | 35.0% | |
TTCATAGTCTAACTCTCAGT+TGG | + | chr8.1:49764273-49764292 | MS.gene070612:intron | 35.0% | |
TTGGAAGATGTGAGTTTGTA+TGG | - | chr8.1:49762209-49762228 | None:intergenic | 35.0% | |
TTGTATGGTTACCATGAATC+GGG | - | chr8.1:49762194-49762213 | None:intergenic | 35.0% | |
TTTGTACAGAATCCAGTGAT+TGG | + | chr8.1:49765662-49765681 | MS.gene070612:intron | 35.0% | |
TTTGTTTCAGTACCTCAAGA+AGG | - | chr8.1:49764191-49764210 | None:intergenic | 35.0% | |
! | ACTCTGTTTAGTCTTTACCT+AGG | + | chr8.1:49765186-49765205 | MS.gene070612:intron | 35.0% |
! | AGATTCTATAGCATTTTCCC+TGG | + | chr8.1:49764044-49764063 | MS.gene070612:CDS | 35.0% |
! | ATACATCTCTCCCTTACTTT+TGG | + | chr8.1:49765715-49765734 | MS.gene070612:CDS | 35.0% |
! | CCTTCTACTTCCTATTTTCA+CGG | + | chr8.1:49763617-49763636 | MS.gene070612:intron | 35.0% |
! | GATTCTATAGCATTTTCCCT+GGG | + | chr8.1:49764045-49764064 | MS.gene070612:CDS | 35.0% |
! | TAGGTTTTCACTTAGGTGAA+AGG | + | chr8.1:49763482-49763501 | MS.gene070612:intron | 35.0% |
! | TTTTGTCAACTTTGTGTAGC+CGG | + | chr8.1:49765419-49765438 | MS.gene070612:intron | 35.0% |
!! | ACCGGAGATTTGTATTGATT+GGG | - | chr8.1:49765134-49765153 | None:intergenic | 35.0% |
!! | AGTGTTCTAGGTTTTCACTT+AGG | + | chr8.1:49763475-49763494 | MS.gene070612:intron | 35.0% |
!! | GTTTATTTTCCGGAGTAGTT+TGG | + | chr8.1:49762826-49762845 | MS.gene070612:intron | 35.0% |
!! | TCTGGTTTGGCTGTAATTAT+GGG | + | chr8.1:49764159-49764178 | MS.gene070612:CDS | 35.0% |
!! | TTCTGGTTTGGCTGTAATTA+TGG | + | chr8.1:49764158-49764177 | MS.gene070612:CDS | 35.0% |
!! | TTGCTTTTGACATACACAAC+AGG | + | chr8.1:49765692-49765711 | MS.gene070612:CDS | 35.0% |
!!! | CACTTGTTGTTCTGTTTTCT+TGG | + | chr8.1:49763729-49763748 | MS.gene070612:intron | 35.0% |
AAAACTCAGCAGTCTCACAT+CGG | + | chr8.1:49764967-49764986 | MS.gene070612:intron | 40.0% | |
AACAATGTCTTCTTCCTGTC+AGG | + | chr8.1:49764014-49764033 | MS.gene070612:intron | 40.0% | |
AATAGAACACACACACACAC+CGG | - | chr8.1:49765152-49765171 | None:intergenic | 40.0% | |
ACCTACACTTTCCTAAGCAA+TGG | - | chr8.1:49763451-49763470 | None:intergenic | 40.0% | |
AGAATCTCCAATAACCTGAC+AGG | - | chr8.1:49764031-49764050 | None:intergenic | 40.0% | |
AGCATGATATCCTCAGATAC+CGG | - | chr8.1:49765305-49765324 | None:intergenic | 40.0% | |
AGTGCACCTAGTGAAACTTA+AGG | - | chr8.1:49763011-49763030 | None:intergenic | 40.0% | |
AGTGGCAGATCATGAATGTT+CGG | - | chr8.1:49765398-49765417 | None:intergenic | 40.0% | |
CAAAACTGTCGAAGAATGAG+GGG | - | chr8.1:49764609-49764628 | None:intergenic | 40.0% | |
CACGACAAGTATCAGAAACA+TGG | - | chr8.1:49766024-49766043 | None:intergenic | 40.0% | |
CAGCATGGATCAATCCTATA+AGG | + | chr8.1:49765896-49765915 | MS.gene070612:CDS | 40.0% | |
CCAAATGCCTACCATAGTTA+CGG | - | chr8.1:49765262-49765281 | None:intergenic | 40.0% | |
CCATCAGCCAAAGTAAAAAC+AGG | - | chr8.1:49762908-49762927 | None:intergenic | 40.0% | |
CCGTGAAAATAGGAAGTAGA+AGG | - | chr8.1:49763620-49763639 | None:intergenic | 40.0% | |
CTGTCTCTGTTATGTGTTTG+TGG | - | chr8.1:49763788-49763807 | None:intergenic | 40.0% | |
GGAAAGGCTTATGGACAAAT+TGG | + | chr8.1:49764114-49764133 | MS.gene070612:CDS | 40.0% | |
GGTTACTAACAGGAATACCT+TGG | - | chr8.1:49764848-49764867 | None:intergenic | 40.0% | |
GTCATTAGACACCATTGCTT+AGG | + | chr8.1:49763437-49763456 | MS.gene070612:intron | 40.0% | |
TAACCAGCGAATTGCTCTTT+AGG | + | chr8.1:49763528-49763547 | MS.gene070612:intron | 40.0% | |
TCTTCTTCCTGTCAGGTTAT+TGG | + | chr8.1:49764021-49764040 | MS.gene070612:intron | 40.0% | |
! | ACCATTGCTTAGGAAAGTGT+AGG | + | chr8.1:49763447-49763466 | MS.gene070612:intron | 40.0% |
! | CACCGGAGATTTGTATTGAT+TGG | - | chr8.1:49765135-49765154 | None:intergenic | 40.0% |
! | GTTTTTACTTTGGCTGATGG+AGG | + | chr8.1:49762908-49762927 | MS.gene070612:CDS | 40.0% |
! | TATAATATGGCAGGGGCTTT+TGG | + | chr8.1:49763280-49763299 | MS.gene070612:intron | 40.0% |
! | TCTTTTGCAGGAAAGGCTTA+TGG | + | chr8.1:49764105-49764124 | MS.gene070612:CDS | 40.0% |
! | TTAGTCTTTACCTAGGAACG+AGG | + | chr8.1:49765193-49765212 | MS.gene070612:intron | 40.0% |
!! | AAATTGGCGGCAACTGATTT+TGG | - | chr8.1:49764634-49764653 | None:intergenic | 40.0% |
!! | ACATTCATTGGTGGATTCAC+AGG | + | chr8.1:49762541-49762560 | MS.gene070612:CDS | 40.0% |
!! | GAGAGCATTGACTTACTTGA+TGG | - | chr8.1:49764658-49764677 | None:intergenic | 40.0% |
!! | GTGTAGGTTTCTAGTGTTCT+AGG | + | chr8.1:49763463-49763482 | MS.gene070612:intron | 40.0% |
!! | TTTTGGCTGCTTCTTTTGCT+GGG | + | chr8.1:49765732-49765751 | MS.gene070612:CDS | 40.0% |
!!! | CCTGTTTTTACTTTGGCTGA+TGG | + | chr8.1:49762905-49762924 | MS.gene070612:CDS | 40.0% |
!!! | GGTTGCTCCTGTTTTTACTT+TGG | + | chr8.1:49762898-49762917 | MS.gene070612:CDS | 40.0% |
AATTGGCCAAGGATTACCTG+TGG | + | chr8.1:49764131-49764150 | MS.gene070612:CDS | 45.0% | |
ACATTACCATTGTGGCAGCT+GGG | - | chr8.1:49766115-49766134 | None:intergenic | 45.0% | |
ACTCAACTCAACCCGATTCA+TGG | + | chr8.1:49762180-49762199 | MS.gene070612:CDS | 45.0% | |
AGTGTGTTACCGCTAACTCT+CGG | + | chr8.1:49763180-49763199 | MS.gene070612:CDS | 45.0% | |
ATACCGTGACCAAACTACTC+CGG | - | chr8.1:49762838-49762857 | None:intergenic | 45.0% | |
ATCTCGACCGTAACTATGGT+AGG | + | chr8.1:49765252-49765271 | MS.gene070612:intron | 45.0% | |
ATGCAGCGACATATCCCAAA+AGG | - | chr8.1:49764825-49764844 | None:intergenic | 45.0% | |
CCAATGTAACCGAGAGTTAG+CGG | - | chr8.1:49763192-49763211 | None:intergenic | 45.0% | |
CCGTAACTATGGTAGGCATT+TGG | + | chr8.1:49765259-49765278 | MS.gene070612:intron | 45.0% | |
CGGTTGAAGTCGAAGATCAA+TGG | + | chr8.1:49762505-49762524 | MS.gene070612:CDS | 45.0% | |
CTTTACCTAGGAACGAGGAT+AGG | + | chr8.1:49765198-49765217 | MS.gene070612:intron | 45.0% | |
GACTATCTCGACCGTAACTA+TGG | + | chr8.1:49765248-49765267 | MS.gene070612:intron | 45.0% | |
GCACCTAGTGAAACTTAAGG+AGG | - | chr8.1:49763008-49763027 | None:intergenic | 45.0% | |
GCTTATGGACAAATTGGCCA+AGG | + | chr8.1:49764120-49764139 | MS.gene070612:CDS | 45.0% | |
GGTAACACACTAAGCGTACA+GGG | - | chr8.1:49763171-49763190 | None:intergenic | 45.0% | |
GGTATCTGAGGATATCATGC+TGG | + | chr8.1:49765304-49765323 | MS.gene070612:intron | 45.0% | |
GTACAGAATCCAGTGATTGG+AGG | + | chr8.1:49765665-49765684 | MS.gene070612:intron | 45.0% | |
TAATGTGGTTGCAAGTCCCA+GGG | - | chr8.1:49764064-49764083 | None:intergenic | 45.0% | |
TACATAGGCTCAACTGCTCA+AGG | - | chr8.1:49763928-49763947 | None:intergenic | 45.0% | |
TACATTACCATTGTGGCAGC+TGG | - | chr8.1:49766116-49766135 | None:intergenic | 45.0% | |
TAGAACCTATCCTCGTTCCT+AGG | - | chr8.1:49765206-49765225 | None:intergenic | 45.0% | |
TATGAAGGATCCGGTATCTG+AGG | + | chr8.1:49765292-49765311 | MS.gene070612:intron | 45.0% | |
TATGGGTCTGAACCTTCTTG+AGG | + | chr8.1:49764176-49764195 | MS.gene070612:CDS | 45.0% | |
TGCAGCGACATATCCCAAAA+GGG | - | chr8.1:49764824-49764843 | None:intergenic | 45.0% | |
TGGGAACAGCCTATCTAAGA+AGG | - | chr8.1:49766096-49766115 | None:intergenic | 45.0% | |
TGTCCTAAAGAGCAATTCGC+TGG | - | chr8.1:49763534-49763553 | None:intergenic | 45.0% | |
TTGGCTGTAATTTATGGGGC+AGG | + | chr8.1:49763126-49763145 | MS.gene070612:CDS | 45.0% | |
TTGGTCACGGTATAGTTCTC+AGG | + | chr8.1:49762845-49762864 | MS.gene070612:intron | 45.0% | |
TTGGTCCAGAACTGCTTCAT+TGG | - | chr8.1:49762981-49763000 | None:intergenic | 45.0% | |
TTTCCGGAGTAGTTTGGTCA+CGG | + | chr8.1:49762832-49762851 | MS.gene070612:intron | 45.0% | |
! | CTTACAGCTTTTGCAGTGAC+TGG | - | chr8.1:49762706-49762725 | None:intergenic | 45.0% |
! | TCTATTTTCAGCCGGACAAC+AGG | + | chr8.1:49762955-49762974 | MS.gene070612:CDS | 45.0% |
! | TTTGGCTGCTTCTTTTGCTG+GGG | + | chr8.1:49765733-49765752 | MS.gene070612:CDS | 45.0% |
!! | CTTTTGGCTGCTTCTTTTGC+TGG | + | chr8.1:49765731-49765750 | MS.gene070612:CDS | 45.0% |
!! | GTGATTTGCTTGTTCGACAG+CGG | + | chr8.1:49766041-49766060 | MS.gene070612:intron | 45.0% |
!!! | GGAGGCATTCTATTTTCAGC+CGG | + | chr8.1:49762947-49762966 | MS.gene070612:CDS | 45.0% |
!!! | AGATTTTTTTAATTTTTTTT+TGG | + | chr8.1:49762423-49762442 | MS.gene070612:intron | 5.0% |
AACAGGTGTACTGCATGGTG+AGG | - | chr8.1:49764794-49764813 | None:intergenic | 50.0% | |
AAGCAGCCACAGGTAATCCT+TGG | - | chr8.1:49764140-49764159 | None:intergenic | 50.0% | |
ACAGGCCAATGAAGCAGTTC+TGG | + | chr8.1:49762973-49762992 | MS.gene070612:CDS | 50.0% | |
AGCGACATATCCCAAAAGGG+TGG | - | chr8.1:49764821-49764840 | None:intergenic | 50.0% | |
ATGCAAATGTAAGCCCAGCC+AGG | - | chr8.1:49764765-49764784 | None:intergenic | 50.0% | |
CACTAAGCGTACAGGGAGAA+AGG | - | chr8.1:49763164-49763183 | None:intergenic | 50.0% | |
CCGCTAACTCTCGGTTACAT+TGG | + | chr8.1:49763189-49763208 | MS.gene070612:CDS | 50.0% | |
CGGTAACACACTAAGCGTAC+AGG | - | chr8.1:49763172-49763191 | None:intergenic | 50.0% | |
CGTTTCGCAAGTACTCAGCA+TGG | + | chr8.1:49765881-49765900 | MS.gene070612:CDS | 50.0% | |
CTAATGTGGTTGCAAGTCCC+AGG | - | chr8.1:49764065-49764084 | None:intergenic | 50.0% | |
GCAACCACATTAGCACTGCT+CGG | + | chr8.1:49764072-49764091 | MS.gene070612:CDS | 50.0% | |
GCTAGAACAGGTGTACTGCA+TGG | - | chr8.1:49764799-49764818 | None:intergenic | 50.0% | |
GTTAGGTGTGCAAGCATACC+TGG | + | chr8.1:49764744-49764763 | MS.gene070612:intron | 50.0% | |
! | ACCTGTTCTAGCCACCCTTT+TGG | + | chr8.1:49764807-49764826 | MS.gene070612:CDS | 50.0% |
! | ACTTTGGCTGATGGAGGCAT+CGG | + | chr8.1:49762914-49762933 | MS.gene070612:CDS | 50.0% |
! | CCTGTTCTAGCCACCCTTTT+GGG | + | chr8.1:49764808-49764827 | MS.gene070612:CDS | 50.0% |
! | CTCTGGAAAAAGCAGAGCAC+AGG | + | chr8.1:49763303-49763322 | MS.gene070612:CDS | 50.0% |
! | TGCTTCATTGGCCTGTTGTC+CGG | - | chr8.1:49762969-49762988 | None:intergenic | 50.0% |
!! | TTCTTTTGCTGGGGCGTTAC+AGG | + | chr8.1:49765742-49765761 | MS.gene070612:CDS | 50.0% |
!!! | AGGAGCGTCTTTTGCAGGAA+AGG | + | chr8.1:49764098-49764117 | MS.gene070612:CDS | 50.0% |
AAGCGTACAGGGAGAAAGGC+TGG | - | chr8.1:49763160-49763179 | None:intergenic | 55.0% | |
ACATTAGCACTGCTCGGCGT+AGG | + | chr8.1:49764078-49764097 | MS.gene070612:CDS | 55.0% | |
AGCAAGCTGCCTCCAATCAC+TGG | - | chr8.1:49765677-49765696 | None:intergenic | 55.0% | |
AGCGGAGCAATGCTGTTAGG+AGG | + | chr8.1:49766059-49766078 | MS.gene070612:intron | 55.0% | |
CCCAAAAGGGTGGCTAGAAC+AGG | - | chr8.1:49764811-49764830 | None:intergenic | 55.0% | |
GACAGCGGAGCAATGCTGTT+AGG | + | chr8.1:49766056-49766075 | MS.gene070612:intron | 55.0% | |
GGAGCAATGCTGTTAGGAGG+TGG | + | chr8.1:49766062-49766081 | MS.gene070612:CDS | 55.0% | |
GGATTACCTGTGGCTGCTTC+TGG | + | chr8.1:49764141-49764160 | MS.gene070612:CDS | 55.0% | |
GGGATATGTCGCTGCATCCA+AGG | + | chr8.1:49764828-49764847 | MS.gene070612:CDS | 55.0% | |
GTGTGCAAGCATACCTGGCT+GGG | + | chr8.1:49764749-49764768 | MS.gene070612:CDS | 55.0% | |
TACGCCGAGCAGTGCTAATG+TGG | - | chr8.1:49764079-49764098 | None:intergenic | 55.0% | |
! | ACCTGTGGCTGCTTCTGGTT+TGG | + | chr8.1:49764146-49764165 | MS.gene070612:CDS | 55.0% |
GCCAAACCAGAAGCAGCCAC+AGG | - | chr8.1:49764150-49764169 | None:intergenic | 60.0% | |
GCTGTTCCCAGCTGCCACAA+TGG | + | chr8.1:49766106-49766125 | MS.gene070612:CDS | 60.0% | |
GGTGTGCAAGCATACCTGGC+TGG | + | chr8.1:49764748-49764767 | MS.gene070612:intron | 60.0% | |
!! | CTGATGGAGGCATCGGTGAC+TGG | + | chr8.1:49762921-49762940 | MS.gene070612:CDS | 60.0% |
!! | GGAGGCATCGGTGACTGGTT+TGG | + | chr8.1:49762926-49762945 | MS.gene070612:CDS | 60.0% |
!! | GGCATCGGTGACTGGTTTGG+AGG | + | chr8.1:49762929-49762948 | MS.gene070612:CDS | 60.0% |
!!! | ATGGCAGGGGCTTTTGGCTC+TGG | + | chr8.1:49763286-49763305 | MS.gene070612:intron | 60.0% |
!!! | GGCGTAGGAGCGTCTTTTGC+AGG | + | chr8.1:49764093-49764112 | MS.gene070612:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 49762132 | 49766136 | 49762132 | ID=MS.gene070612 |
chr8.1 | mRNA | 49762132 | 49766136 | 49762132 | ID=MS.gene070612.t1;Parent=MS.gene070612 |
chr8.1 | exon | 49762132 | 49762201 | 49762132 | ID=MS.gene070612.t1.exon1;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49762132 | 49762201 | 49762132 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49762452 | 49762562 | 49762452 | ID=MS.gene070612.t1.exon2;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49762452 | 49762562 | 49762452 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49762686 | 49762720 | 49762686 | ID=MS.gene070612.t1.exon3;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49762686 | 49762720 | 49762686 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49762893 | 49763023 | 49762893 | ID=MS.gene070612.t1.exon4;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49762893 | 49763023 | 49762893 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49763125 | 49763210 | 49763125 | ID=MS.gene070612.t1.exon5;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49763125 | 49763210 | 49763125 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49763293 | 49763324 | 49763293 | ID=MS.gene070612.t1.exon6;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49763293 | 49763324 | 49763293 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49764036 | 49764197 | 49764036 | ID=MS.gene070612.t1.exon7;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49764036 | 49764197 | 49764036 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49764589 | 49764661 | 49764589 | ID=MS.gene070612.t1.exon8;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49764589 | 49764661 | 49764589 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49764749 | 49764849 | 49764749 | ID=MS.gene070612.t1.exon9;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49764749 | 49764849 | 49764749 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49765671 | 49765763 | 49765671 | ID=MS.gene070612.t1.exon10;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49765671 | 49765763 | 49765671 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49765871 | 49765917 | 49765871 | ID=MS.gene070612.t1.exon11;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49765871 | 49765917 | 49765871 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
chr8.1 | exon | 49766061 | 49766136 | 49766061 | ID=MS.gene070612.t1.exon12;Parent=MS.gene070612.t1 |
chr8.1 | CDS | 49766061 | 49766136 | 49766061 | ID=cds.MS.gene070612.t1;Parent=MS.gene070612.t1 |
Gene Sequence |
Protein sequence |