Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45913.t1 | XP_003622910.1 | 96.5 | 171 | 6 | 0 | 1 | 171 | 1 | 171 | 5.90E-82 | 313.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45913.t1 | Q8W191 | 77.1 | 83 | 19 | 0 | 87 | 169 | 67 | 149 | 3.0e-26 | 119.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45913.t1 | G7L172 | 96.5 | 171 | 6 | 0 | 1 | 171 | 1 | 171 | 4.3e-82 | 313.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene45913.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene45913 | 0.896473 | 3.57E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene45913 | 0.802809 | 4.70E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene45913 | 0.841858 | 3.68E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene45913 | 0.885927 | 5.33E-72 | -1.69E-46 |
| MS.gene049232 | MS.gene45913 | 0.880626 | 4.70E-70 | -1.69E-46 |
| MS.gene049285 | MS.gene45913 | 0.902303 | 1.11E-78 | -1.69E-46 |
| MS.gene049320 | MS.gene45913 | 0.877894 | 4.35E-69 | -1.69E-46 |
| MS.gene049396 | MS.gene45913 | 0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene04939 | MS.gene45913 | 0.807132 | 5.87E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene45913 | 0.847741 | 9.54E-60 | -1.69E-46 |
| MS.gene049611 | MS.gene45913 | -0.808522 | 2.97E-50 | -1.69E-46 |
| MS.gene049627 | MS.gene45913 | 0.811868 | 5.65E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene45913 | 0.877486 | 6.04E-69 | -1.69E-46 |
| MS.gene049805 | MS.gene45913 | 0.83114 | 1.98E-55 | -1.69E-46 |
| MS.gene049865 | MS.gene45913 | 0.805553 | 1.26E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene45913 | 0.873558 | 1.34E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene45913 | 0.847218 | 1.33E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene45913 | 0.849348 | 3.43E-60 | -1.69E-46 |
| MS.gene050170 | MS.gene45913 | 0.910227 | 2.37E-82 | -1.69E-46 |
| MS.gene050216 | MS.gene45913 | 0.833853 | 4.20E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene45913 | 0.932609 | 6.59E-95 | -1.69E-46 |
| MS.gene050333 | MS.gene45913 | 0.853132 | 2.92E-61 | -1.69E-46 |
| MS.gene050338 | MS.gene45913 | -0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene45913 | -0.820613 | 6.25E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene45913 | 0.839887 | 1.21E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene45913 | 0.892429 | 1.60E-74 | -1.69E-46 |
| MS.gene050502 | MS.gene45913 | 0.809067 | 2.27E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene45913 | 0.892128 | 2.11E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene45913 | 0.864917 | 8.61E-65 | -1.69E-46 |
| MS.gene050538 | MS.gene45913 | 0.809316 | 2.01E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene45913 | 0.869658 | 2.62E-66 | -1.69E-46 |
| MS.gene050593 | MS.gene45913 | 0.808523 | 2.97E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene45913 | 0.898372 | 5.66E-77 | -1.69E-46 |
| MS.gene050662 | MS.gene45913 | 0.810244 | 1.27E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene45913 | 0.862523 | 4.77E-64 | -1.69E-46 |
| MS.gene050697 | MS.gene45913 | 0.851048 | 1.14E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene45913 | 0.861847 | 7.69E-64 | -1.69E-46 |
| MS.gene050747 | MS.gene45913 | 0.871442 | 6.81E-67 | -1.69E-46 |
| MS.gene050772 | MS.gene45913 | 0.867993 | 9.08E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene45913 | 0.880874 | 3.83E-70 | -1.69E-46 |
| MS.gene05081 | MS.gene45913 | 0.84465 | 6.63E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene45913 | 0.916708 | 1.29E-85 | -1.69E-46 |
| MS.gene050871 | MS.gene45913 | 0.915965 | 3.14E-85 | -1.69E-46 |
| MS.gene050876 | MS.gene45913 | 0.825891 | 3.66E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene45913 | 0.862388 | 5.25E-64 | -1.69E-46 |
| MS.gene050950 | MS.gene45913 | 0.864593 | 1.09E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene45913 | 0.866292 | 3.17E-65 | -1.69E-46 |
| MS.gene05100 | MS.gene45913 | 0.810098 | 1.36E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene45913 | -0.825349 | 4.92E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene45913 | -0.827574 | 1.45E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene45913 | 0.868231 | 7.61E-66 | -1.69E-46 |
| MS.gene051317 | MS.gene45913 | 0.872506 | 3.02E-67 | -1.69E-46 |
| MS.gene051364 | MS.gene45913 | -0.806072 | 9.83E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene45913 | 0.842013 | 3.35E-58 | -1.69E-46 |
| MS.gene051651 | MS.gene45913 | -0.830287 | 3.20E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene45913 | 0.808536 | 2.95E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene45913 | 0.827061 | 1.93E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene45913 | 0.834188 | 3.46E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene45913 | 0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene45913 | 0.864466 | 1.19E-64 | -1.69E-46 |
| MS.gene051858 | MS.gene45913 | 0.817007 | 4.12E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene45913 | 0.833213 | 6.07E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene45913 | 0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene45913 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene052066 | MS.gene45913 | 0.811884 | 5.60E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene45913 | -0.831384 | 1.72E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene45913 | 0.876405 | 1.43E-68 | -1.69E-46 |
| MS.gene052482 | MS.gene45913 | 0.883053 | 6.21E-71 | -1.69E-46 |
| MS.gene052486 | MS.gene45913 | 0.884808 | 1.40E-71 | -1.69E-46 |
| MS.gene052503 | MS.gene45913 | 0.866275 | 3.21E-65 | -1.69E-46 |
| MS.gene052504 | MS.gene45913 | 0.851131 | 1.08E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene45913 | 0.871129 | 8.65E-67 | -1.69E-46 |
| MS.gene052615 | MS.gene45913 | 0.847157 | 1.38E-59 | -1.69E-46 |
| MS.gene052820 | MS.gene45913 | 0.822057 | 2.90E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene45913 | 0.874989 | 4.39E-68 | -1.69E-46 |
| MS.gene052823 | MS.gene45913 | 0.867507 | 1.30E-65 | -1.69E-46 |
| MS.gene052825 | MS.gene45913 | 0.866024 | 3.86E-65 | -1.69E-46 |
| MS.gene052870 | MS.gene45913 | 0.85705 | 2.12E-62 | -1.69E-46 |
| MS.gene052872 | MS.gene45913 | 0.870313 | 1.60E-66 | -1.69E-46 |
| MS.gene052916 | MS.gene45913 | 0.830195 | 3.37E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene45913 | 0.884579 | 1.70E-71 | -1.69E-46 |
| MS.gene053117 | MS.gene45913 | 0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene45913 | 0.887567 | 1.27E-72 | -1.69E-46 |
| MS.gene053207 | MS.gene45913 | 0.810701 | 1.01E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene45913 | 0.857781 | 1.29E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene45913 | 0.86022 | 2.40E-63 | -1.69E-46 |
| MS.gene053420 | MS.gene45913 | -0.829113 | 6.17E-55 | -1.69E-46 |
| MS.gene053421 | MS.gene45913 | -0.812668 | 3.78E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene45913 | 0.848493 | 5.92E-60 | -1.69E-46 |
| MS.gene053479 | MS.gene45913 | 0.891704 | 3.11E-74 | -1.69E-46 |
| MS.gene053480 | MS.gene45913 | 0.847191 | 1.35E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene45913 | 0.865974 | 4.00E-65 | -1.69E-46 |
| MS.gene053626 | MS.gene45913 | 0.853282 | 2.65E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene45913 | 0.834948 | 2.23E-56 | -1.69E-46 |
| MS.gene053633 | MS.gene45913 | 0.860939 | 1.46E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene45913 | 0.904447 | 1.22E-79 | -1.69E-46 |
| MS.gene053916 | MS.gene45913 | 0.853872 | 1.79E-61 | -1.69E-46 |
| MS.gene054003 | MS.gene45913 | 0.848849 | 4.71E-60 | -1.69E-46 |
| MS.gene054408 | MS.gene45913 | 0.850588 | 1.54E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene45913 | 0.886705 | 2.71E-72 | -1.69E-46 |
| MS.gene054600 | MS.gene45913 | 0.845703 | 3.44E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene45913 | 0.868261 | 7.45E-66 | -1.69E-46 |
| MS.gene054706 | MS.gene45913 | -0.856979 | 2.23E-62 | -1.69E-46 |
| MS.gene05470 | MS.gene45913 | 0.880988 | 3.49E-70 | -1.69E-46 |
| MS.gene05494 | MS.gene45913 | 0.839198 | 1.83E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene45913 | 0.910234 | 2.35E-82 | -1.69E-46 |
| MS.gene05505 | MS.gene45913 | 0.817881 | 2.62E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene45913 | -0.806189 | 9.28E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene45913 | 0.831142 | 1.97E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene45913 | 0.865873 | 4.31E-65 | -1.69E-46 |
| MS.gene055289 | MS.gene45913 | 0.815096 | 1.10E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene45913 | 0.876321 | 1.53E-68 | -1.69E-46 |
| MS.gene055502 | MS.gene45913 | 0.892892 | 1.04E-74 | -1.69E-46 |
| MS.gene055577 | MS.gene45913 | 0.902551 | 8.64E-79 | -1.69E-46 |
| MS.gene055722 | MS.gene45913 | 0.822856 | 1.89E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene45913 | 0.893413 | 6.44E-75 | -1.69E-46 |
| MS.gene055750 | MS.gene45913 | 0.895053 | 1.38E-75 | -1.69E-46 |
| MS.gene055751 | MS.gene45913 | 0.897927 | 8.74E-77 | -1.69E-46 |
| MS.gene055776 | MS.gene45913 | 0.846375 | 2.26E-59 | -1.69E-46 |
| MS.gene055849 | MS.gene45913 | 0.807018 | 6.20E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene45913 | 0.910178 | 2.51E-82 | -1.69E-46 |
| MS.gene055941 | MS.gene45913 | 0.86963 | 2.68E-66 | -1.69E-46 |
| MS.gene055942 | MS.gene45913 | -0.800288 | 1.55E-48 | -1.69E-46 |
| MS.gene056046 | MS.gene45913 | 0.844993 | 5.36E-59 | -1.69E-46 |
| MS.gene056166 | MS.gene45913 | 0.828839 | 7.19E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene45913 | 0.821937 | 3.10E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene45913 | 0.884181 | 2.39E-71 | -1.69E-46 |
| MS.gene056446 | MS.gene45913 | 0.833047 | 6.67E-56 | -1.69E-46 |
| MS.gene056448 | MS.gene45913 | 0.803578 | 3.26E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene45913 | 0.814014 | 1.91E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene45913 | 0.808726 | 2.69E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene45913 | 0.921801 | 2.24E-88 | -1.69E-46 |
| MS.gene056510 | MS.gene45913 | 0.903856 | 2.25E-79 | -1.69E-46 |
| MS.gene056549 | MS.gene45913 | 0.807614 | 4.64E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene45913 | 0.826523 | 2.59E-54 | -1.69E-46 |
| MS.gene056618 | MS.gene45913 | -0.816895 | 4.37E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene45913 | 0.883515 | 4.21E-71 | -1.69E-46 |
| MS.gene056692 | MS.gene45913 | 0.863935 | 1.75E-64 | -1.69E-46 |
| MS.gene056694 | MS.gene45913 | -0.811274 | 7.60E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene45913 | -0.815954 | 7.09E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene45913 | 0.826763 | 2.27E-54 | -1.69E-46 |
| MS.gene056898 | MS.gene45913 | 0.833009 | 6.82E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene45913 | 0.804083 | 2.56E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene45913 | -0.805208 | 1.49E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene45913 | 0.830262 | 3.24E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene45913 | 0.85717 | 1.96E-62 | -1.69E-46 |
| MS.gene057331 | MS.gene45913 | 0.807224 | 5.61E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene45913 | 0.842006 | 3.36E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene45913 | 0.852284 | 5.11E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene45913 | 0.804712 | 1.89E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene45913 | 0.8778 | 4.70E-69 | -1.69E-46 |
| MS.gene057856 | MS.gene45913 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene45913 | 0.838098 | 3.52E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene45913 | 0.864033 | 1.63E-64 | -1.69E-46 |
| MS.gene057926 | MS.gene45913 | 0.808598 | 2.86E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene45913 | 0.808594 | 2.87E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene45913 | 0.862446 | 5.04E-64 | -1.69E-46 |
| MS.gene058171 | MS.gene45913 | -0.807436 | 5.06E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene45913 | -0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene45913 | -0.815194 | 1.05E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene45913 | -0.808318 | 3.29E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene45913 | -0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene45913 | -0.868922 | 4.55E-66 | -1.69E-46 |
| MS.gene058335 | MS.gene45913 | 0.819657 | 1.04E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene45913 | 0.85582 | 4.88E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene45913 | 0.89298 | 9.61E-75 | -1.69E-46 |
| MS.gene058382 | MS.gene45913 | -0.832256 | 1.05E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene45913 | 0.884748 | 1.47E-71 | -1.69E-46 |
| MS.gene058544 | MS.gene45913 | 0.87596 | 2.04E-68 | -1.69E-46 |
| MS.gene058723 | MS.gene45913 | 0.800406 | 1.46E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene45913 | 0.884531 | 1.77E-71 | -1.69E-46 |
| MS.gene058838 | MS.gene45913 | 0.88021 | 6.62E-70 | -1.69E-46 |
| MS.gene059022 | MS.gene45913 | 0.883127 | 5.84E-71 | -1.69E-46 |
| MS.gene059023 | MS.gene45913 | 0.910077 | 2.80E-82 | -1.69E-46 |
| MS.gene059045 | MS.gene45913 | -0.803707 | 3.07E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene45913 | 0.808517 | 2.98E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene45913 | 0.84705 | 1.48E-59 | -1.69E-46 |
| MS.gene05914 | MS.gene45913 | 0.826529 | 2.58E-54 | -1.69E-46 |
| MS.gene059305 | MS.gene45913 | 0.833803 | 4.32E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene45913 | 0.822951 | 1.80E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene45913 | 0.833128 | 6.37E-56 | -1.69E-46 |
| MS.gene059526 | MS.gene45913 | -0.81861 | 1.79E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene45913 | 0.854005 | 1.64E-61 | -1.69E-46 |
| MS.gene059677 | MS.gene45913 | 0.883626 | 3.83E-71 | -1.69E-46 |
| MS.gene059699 | MS.gene45913 | -0.848587 | 5.57E-60 | -1.69E-46 |
| MS.gene059701 | MS.gene45913 | -0.815531 | 8.82E-52 | -1.69E-46 |
| MS.gene059703 | MS.gene45913 | -0.857669 | 1.39E-62 | -1.69E-46 |
| MS.gene059718 | MS.gene45913 | 0.880717 | 4.36E-70 | -1.69E-46 |
| MS.gene059756 | MS.gene45913 | 0.845992 | 2.87E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene45913 | 0.837751 | 4.32E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene45913 | 0.834543 | 2.82E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene45913 | 0.90364 | 2.81E-79 | -1.69E-46 |
| MS.gene059902 | MS.gene45913 | 0.810426 | 1.16E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene45913 | 0.812124 | 4.96E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene45913 | 0.89254 | 1.45E-74 | -1.69E-46 |
| MS.gene06027 | MS.gene45913 | 0.856561 | 2.96E-62 | -1.69E-46 |
| MS.gene060295 | MS.gene45913 | 0.801456 | 8.93E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene45913 | 0.838124 | 3.46E-57 | -1.69E-46 |
| MS.gene060526 | MS.gene45913 | 0.804922 | 1.71E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene45913 | -0.835533 | 1.59E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene45913 | 0.857927 | 1.17E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene45913 | 0.903481 | 3.32E-79 | -1.69E-46 |
| MS.gene060778 | MS.gene45913 | 0.869425 | 3.13E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene45913 | 0.900439 | 7.32E-78 | -1.69E-46 |
| MS.gene060823 | MS.gene45913 | -0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene45913 | 0.826897 | 2.11E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene45913 | 0.85608 | 4.10E-62 | -1.69E-46 |
| MS.gene06097 | MS.gene45913 | 0.838234 | 3.25E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene45913 | 0.91787 | 3.13E-86 | -1.69E-46 |
| MS.gene061044 | MS.gene45913 | -0.843009 | 1.82E-58 | -1.69E-46 |
| MS.gene061134 | MS.gene45913 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene45913 | 0.867767 | 1.07E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45913.t1 | MTR_7g057160 | 96.491 | 171 | 6 | 0 | 1 | 171 | 1 | 171 | 6.09e-122 | 341 |
| MS.gene45913.t1 | MTR_3g436010 | 46.154 | 156 | 78 | 1 | 16 | 171 | 169 | 318 | 1.69e-33 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45913.t1 | AT3G17609 | 60.000 | 130 | 47 | 2 | 39 | 167 | 22 | 147 | 7.06e-44 | 142 |
| MS.gene45913.t1 | AT3G17609 | 61.157 | 121 | 42 | 2 | 48 | 167 | 2 | 118 | 3.58e-41 | 135 |
| MS.gene45913.t1 | AT3G17609 | 74.444 | 90 | 22 | 1 | 79 | 167 | 43 | 132 | 4.84e-40 | 132 |
| MS.gene45913.t1 | AT3G17609 | 74.444 | 90 | 22 | 1 | 79 | 167 | 44 | 133 | 5.04e-40 | 132 |
| MS.gene45913.t1 | AT5G11260 | 48.175 | 137 | 54 | 3 | 31 | 161 | 26 | 151 | 5.65e-33 | 115 |
| MS.gene45913.t1 | AT5G11260 | 48.120 | 133 | 52 | 3 | 31 | 157 | 26 | 147 | 2.95e-30 | 108 |
Find 39 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATACGTTCTTCTAAAT+TGG | 0.194375 | 7.2:+45766443 | None:intergenic |
| CTTCATCTTCATCTTCTTCA+TGG | 0.213050 | 7.2:-45768140 | MS.gene45913:CDS |
| TCTTCCACGGCGGCGCTTGC+CGG | 0.245919 | 7.2:+45766969 | None:intergenic |
| CTTCCACGGCGGCGCTTGCC+GGG | 0.275869 | 7.2:+45766970 | None:intergenic |
| CAAATAGGTTGCTAAGGAAT+AGG | 0.306771 | 7.2:-45766551 | MS.gene45913:intron |
| TCATTGCTCTCATCAACTTT+GGG | 0.320674 | 7.2:+45766250 | None:intergenic |
| TTCATTGCTCTCATCAACTT+TGG | 0.343653 | 7.2:+45766249 | None:intergenic |
| CATTGTGTACCTTCCACATC+TGG | 0.376399 | 7.2:+45767078 | None:intergenic |
| TTCCTTCATCTCAGTATCAT+TGG | 0.395557 | 7.2:+45768182 | None:intergenic |
| TCGGAGCATGGCGTTCTCAT+TGG | 0.400151 | 7.2:+45766413 | None:intergenic |
| ATGAAGGAAGCTGCAACAAC+TGG | 0.409191 | 7.2:-45768168 | MS.gene45913:CDS |
| TTTGATTTGTTAACTCAGAA+TGG | 0.409238 | 7.2:+45767046 | None:intergenic |
| CGTCTATGTTCCTTGTCTGC+AGG | 0.409298 | 7.2:+45766943 | None:intergenic |
| CCTATGCCTCCACATAGATT+TGG | 0.415132 | 7.2:-45768105 | MS.gene45913:intron |
| AAATAGGTTGCTAAGGAATA+GGG | 0.428080 | 7.2:-45766550 | MS.gene45913:intron |
| CTTCATCTTCTTCATGGAGT+AGG | 0.466765 | 7.2:-45768134 | MS.gene45913:CDS |
| CAACTTCAAGCAGGCTTCCC+CGG | 0.470731 | 7.2:-45766988 | MS.gene45913:CDS |
| GTCTATGTTCCTTGTCTGCA+GGG | 0.478530 | 7.2:+45766944 | None:intergenic |
| CAGTTACATTGCTTTGATTG+TGG | 0.494434 | 7.2:+45767016 | None:intergenic |
| AGCCAATGATACTGAGATGA+AGG | 0.496590 | 7.2:-45768184 | MS.gene45913:CDS |
| TGTCTGCAGGGTTTCTTCCA+CGG | 0.500164 | 7.2:+45766956 | None:intergenic |
| AAAGTTGATGAGAGCAATGA+AGG | 0.515891 | 7.2:-45766247 | MS.gene45913:CDS |
| TTATGTTACCTTTCGGAGCA+TGG | 0.519796 | 7.2:+45766401 | None:intergenic |
| TTCCACGGCGGCGCTTGCCG+GGG | 0.522944 | 7.2:+45766971 | None:intergenic |
| CCAAATCTATGTGGAGGCAT+AGG | 0.526031 | 7.2:+45768105 | None:intergenic |
| AGGAACATAGACGTCTCAAA+AGG | 0.535376 | 7.2:-45766933 | MS.gene45913:intron |
| GTGTTACAAATAGGTTGCTA+AGG | 0.552163 | 7.2:-45766557 | MS.gene45913:intron |
| TGGAAGAAACCCTGCAGACA+AGG | 0.552255 | 7.2:-45766953 | MS.gene45913:CDS |
| CATGAAGAAGATGAAGATGA+AGG | 0.570746 | 7.2:+45768141 | None:intergenic |
| GTTGCTAAGGAATAGGGTCT+CGG | 0.571634 | 7.2:-45766544 | MS.gene45913:CDS |
| AATCTATGTGGAGGCATAGG+AGG | 0.581180 | 7.2:+45768108 | None:intergenic |
| ACTGATGCTCAACTTCAAGC+AGG | 0.591244 | 7.2:-45766997 | MS.gene45913:CDS |
| TTCCCCGGCAAGCGCCGCCG+TGG | 0.608180 | 7.2:-45766973 | MS.gene45913:CDS |
| TGAGAACGCCATGCTCCGAA+AGG | 0.615500 | 7.2:-45766409 | MS.gene45913:intron |
| CACTTACCAAATCTATGTGG+AGG | 0.634191 | 7.2:+45768099 | None:intergenic |
| TCTGTTCGAAGTTCCAGATG+TGG | 0.639704 | 7.2:-45767091 | MS.gene45913:CDS |
| TGACACTTACCAAATCTATG+TGG | 0.640404 | 7.2:+45768096 | None:intergenic |
| CTGCAGGGTTTCTTCCACGG+CGG | 0.647406 | 7.2:+45766959 | None:intergenic |
| TTCGAAGTTCCAGATGTGGA+AGG | 0.651950 | 7.2:-45767087 | MS.gene45913:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATTGTAATATGTAT+TGG | + | chr7.2:45767707-45767726 | None:intergenic | 10.0% |
| !! | TTGTTAAATAAAAATTTAAC+GGG | + | chr7.2:45766751-45766770 | None:intergenic | 10.0% |
| !! | AAGAATATTAAGTATATTGT+TGG | - | chr7.2:45766601-45766620 | MS.gene45913:intron | 15.0% |
| !! | AATGTCAAATTAAAATTTGA+AGG | + | chr7.2:45767213-45767232 | None:intergenic | 15.0% |
| !! | ATGTCAAATTAAAATTTGAA+GGG | + | chr7.2:45767212-45767231 | None:intergenic | 15.0% |
| !! | CAAAATTGTTACTATATATT+AGG | - | chr7.2:45767151-45767170 | MS.gene45913:intron | 15.0% |
| !! | GGTATATATATAATATAAGT+TGG | - | chr7.2:45766665-45766684 | MS.gene45913:intron | 15.0% |
| !! | TCAAAATTTGCATTGAATTT+CGG | - | chr7.2:45766966-45766985 | MS.gene45913:CDS | 20.0% |
| !! | TCAAATTGTTGATGTAAAAA+CGG | + | chr7.2:45766826-45766845 | None:intergenic | 20.0% |
| !!! | ACAAGTTGTTTTTAAATGAT+CGG | + | chr7.2:45766630-45766649 | None:intergenic | 20.0% |
| !!! | TAATATGGACTAAATTGAAT+TGG | + | chr7.2:45767241-45767260 | None:intergenic | 20.0% |
| ! | AAAACAAGTCACGTTTAATA+TGG | + | chr7.2:45767256-45767275 | None:intergenic | 25.0% |
| ! | AACTTTGTGATATGATATTG+TGG | + | chr7.2:45766863-45766882 | None:intergenic | 25.0% |
| ! | ACTTGTTTCATGAAAAGTAA+AGG | - | chr7.2:45766644-45766663 | MS.gene45913:intron | 25.0% |
| ! | ATAACATCATGTTGATCAAA+TGG | - | chr7.2:45768121-45768140 | MS.gene45913:CDS | 25.0% |
| ! | ATATGCGTGTGTATATTATA+AGG | + | chr7.2:45766706-45766725 | None:intergenic | 25.0% |
| ! | GTTAAGATTATGTTACCTTT+CGG | + | chr7.2:45768050-45768069 | None:intergenic | 25.0% |
| ! | TACACACGCATATATTAAAT+TGG | - | chr7.2:45766713-45766732 | MS.gene45913:intron | 25.0% |
| ! | TATGAAGAATCTTGTAAGTT+TGG | + | chr7.2:45766530-45766549 | None:intergenic | 25.0% |
| ! | TATGCGTGTGTATATTATAA+GGG | + | chr7.2:45766705-45766724 | None:intergenic | 25.0% |
| ! | TCAAATGGAAATTTATTCGA+TGG | - | chr7.2:45768136-45768155 | MS.gene45913:CDS | 25.0% |
| !! | AAATAAAAGACCTTAACTTG+AGG | + | chr7.2:45766430-45766449 | None:intergenic | 25.0% |
| !! | AAATGACTTGTGTTACAAAT+AGG | - | chr7.2:45767875-45767894 | MS.gene45913:intron | 25.0% |
| !! | CATATTTTATCCTCAAGTTA+AGG | - | chr7.2:45766417-45766436 | MS.gene45913:CDS | 25.0% |
| !!! | ATATAAGTTGGTCCATATTA+AGG | - | chr7.2:45766677-45766696 | MS.gene45913:intron | 25.0% |
| !!! | TATAAGTTGGTCCATATTAA+GGG | - | chr7.2:45766678-45766697 | MS.gene45913:intron | 25.0% |
| !!! | TTTGATTTGTTAACTCAGAA+TGG | + | chr7.2:45767398-45767417 | None:intergenic | 25.0% |
| AAATAGGTTGCTAAGGAATA+GGG | - | chr7.2:45767891-45767910 | MS.gene45913:intron | 30.0% | |
| AACTGCAGACAATTCAAATT+TGG | - | chr7.2:45767042-45767061 | MS.gene45913:CDS | 30.0% | |
| AATAGTGACTATAGAGTGTA+AGG | + | chr7.2:45767568-45767587 | None:intergenic | 30.0% | |
| AATCTTGTAAGTTTGGACTT+TGG | + | chr7.2:45766523-45766542 | None:intergenic | 30.0% | |
| ACATTAACATGTGCTAACAT+TGG | + | chr7.2:45767068-45767087 | None:intergenic | 30.0% | |
| ATGATTATCGATCATTGTGA+AGG | + | chr7.2:45766892-45766911 | None:intergenic | 30.0% | |
| GTCTGACTTTACTTATCTTT+CGG | - | chr7.2:45767820-45767839 | MS.gene45913:intron | 30.0% | |
| TGAGATACGTTCTTCTAAAT+TGG | + | chr7.2:45768001-45768020 | None:intergenic | 30.0% | |
| !! | ATAAGTTGGTCCATATTAAG+GGG | - | chr7.2:45766679-45766698 | MS.gene45913:intron | 30.0% |
| !!! | CGTACACTTTTTTTCTTTCA+CGG | + | chr7.2:45767933-45767952 | None:intergenic | 30.0% |
| !!! | GTACACTTTTTTTCTTTCAC+GGG | + | chr7.2:45767932-45767951 | None:intergenic | 30.0% |
| ATAGACGTCTCAAAAGGTAA+GGG | - | chr7.2:45767514-45767533 | MS.gene45913:intron | 35.0% | |
| ATTATAAGGGCCCCTTAATA+TGG | + | chr7.2:45766692-45766711 | None:intergenic | 35.0% | |
| ATTATCGATCATTGTGAAGG+TGG | + | chr7.2:45766889-45766908 | None:intergenic | 35.0% | |
| CAAATAGGTTGCTAAGGAAT+AGG | - | chr7.2:45767890-45767909 | MS.gene45913:intron | 35.0% | |
| CAGTTACATTGCTTTGATTG+TGG | + | chr7.2:45767428-45767447 | None:intergenic | 35.0% | |
| CATGAAGAAGATGAAGATGA+AGG | + | chr7.2:45766303-45766322 | None:intergenic | 35.0% | |
| CTCAAACGATTGTTGAACTT+CGG | - | chr7.2:45767755-45767774 | MS.gene45913:intron | 35.0% | |
| CTTCATCTTCATCTTCTTCA+TGG | - | chr7.2:45766301-45766320 | MS.gene45913:intron | 35.0% | |
| GTGTTACAAATAGGTTGCTA+AGG | - | chr7.2:45767884-45767903 | MS.gene45913:intron | 35.0% | |
| TATTGATAGGCTCTTGACTT+AGG | + | chr7.2:45766473-45766492 | None:intergenic | 35.0% | |
| TCATTGCTCTCATCAACTTT+GGG | + | chr7.2:45768194-45768213 | None:intergenic | 35.0% | |
| TGACACTTACCAAATCTATG+TGG | + | chr7.2:45766348-45766367 | None:intergenic | 35.0% | |
| TTCATTGCTCTCATCAACTT+TGG | + | chr7.2:45768195-45768214 | None:intergenic | 35.0% | |
| TTCCTTCATCTCAGTATCAT+TGG | + | chr7.2:45766262-45766281 | None:intergenic | 35.0% | |
| !! | AAAGTTGATGAGAGCAATGA+AGG | - | chr7.2:45768194-45768213 | MS.gene45913:CDS | 35.0% |
| !! | TTCGATGGTTTTACTTGTAC+AGG | - | chr7.2:45768151-45768170 | MS.gene45913:CDS | 35.0% |
| AGCCAATGATACTGAGATGA+AGG | - | chr7.2:45766257-45766276 | MS.gene45913:CDS | 40.0% | |
| AGGAACATAGACGTCTCAAA+AGG | - | chr7.2:45767508-45767527 | MS.gene45913:intron | 40.0% | |
| CACTTACCAAATCTATGTGG+AGG | + | chr7.2:45766345-45766364 | None:intergenic | 40.0% | |
| CATAGACGTCTCAAAAGGTA+AGG | - | chr7.2:45767513-45767532 | MS.gene45913:intron | 40.0% | |
| CTTCATCTTCTTCATGGAGT+AGG | - | chr7.2:45766307-45766326 | MS.gene45913:intron | 40.0% | |
| TTATGTTACCTTTCGGAGCA+TGG | + | chr7.2:45768043-45768062 | None:intergenic | 40.0% | |
| ! | TTTTTCTTTCACGGGCTTGT+TGG | + | chr7.2:45767924-45767943 | None:intergenic | 40.0% |
| !! | TTTTCTTTCACGGGCTTGTT+GGG | + | chr7.2:45767923-45767942 | None:intergenic | 40.0% |
| ACTGATGCTCAACTTCAAGC+AGG | - | chr7.2:45767444-45767463 | MS.gene45913:intron | 45.0% | |
| AGATCTTCATCGCTATCGTC+TGG | + | chr7.2:45767333-45767352 | None:intergenic | 45.0% | |
| ATGAAGGAAGCTGCAACAAC+TGG | - | chr7.2:45766273-45766292 | MS.gene45913:intron | 45.0% | |
| CATTGTGTACCTTCCACATC+TGG | + | chr7.2:45767366-45767385 | None:intergenic | 45.0% | |
| CCTATGCCTCCACATAGATT+TGG | - | chr7.2:45766336-45766355 | MS.gene45913:intron | 45.0% | |
| GGTGACAGTTGGATCTAGAT+TGG | + | chr7.2:45766996-45767015 | None:intergenic | 45.0% | |
| GTCTATGTTCCTTGTCTGCA+GGG | + | chr7.2:45767500-45767519 | None:intergenic | 45.0% | |
| GTTGCTAAGGAATAGGGTCT+CGG | - | chr7.2:45767897-45767916 | MS.gene45913:intron | 45.0% | |
| TAGATCCAACTGTCACCTGA+GGG | - | chr7.2:45766999-45767018 | MS.gene45913:CDS | 45.0% | |
| TCTGTTCGAAGTTCCAGATG+TGG | - | chr7.2:45767350-45767369 | MS.gene45913:intron | 45.0% | |
| TTCGAAGTTCCAGATGTGGA+AGG | - | chr7.2:45767354-45767373 | MS.gene45913:intron | 45.0% | |
| ! | AATCTATGTGGAGGCATAGG+AGG | + | chr7.2:45766336-45766355 | None:intergenic | 45.0% |
| ! | CCAAATCTATGTGGAGGCAT+AGG | + | chr7.2:45766339-45766358 | None:intergenic | 45.0% |
| !! | ATTGTTAAATAAAAATTTAA+CGG | + | chr7.2:45766752-45766771 | None:intergenic | 5.0% |
| !!! | TTTTTTAATTAAATATTGAT+AGG | + | chr7.2:45766486-45766505 | None:intergenic | 5.0% |
| CGTCTATGTTCCTTGTCTGC+AGG | + | chr7.2:45767501-45767520 | None:intergenic | 50.0% | |
| CTAGATCCAACTGTCACCTG+AGG | - | chr7.2:45766998-45767017 | MS.gene45913:CDS | 50.0% | |
| TGGAAGAAACCCTGCAGACA+AGG | - | chr7.2:45767488-45767507 | MS.gene45913:intron | 50.0% | |
| TGTCTGCAGGGTTTCTTCCA+CGG | + | chr7.2:45767488-45767507 | None:intergenic | 50.0% | |
| CAACTTCAAGCAGGCTTCCC+CGG | - | chr7.2:45767453-45767472 | MS.gene45913:intron | 55.0% | |
| TCACTCCCTCAGGTGACAGT+TGG | + | chr7.2:45767007-45767026 | None:intergenic | 55.0% | |
| TCGGAGCATGGCGTTCTCAT+TGG | + | chr7.2:45768031-45768050 | None:intergenic | 55.0% | |
| TCTCGTGCATTCACTCCCTC+AGG | + | chr7.2:45767017-45767036 | None:intergenic | 55.0% | |
| TGAGAACGCCATGCTCCGAA+AGG | - | chr7.2:45768032-45768051 | MS.gene45913:intron | 55.0% | |
| CTGCAGGGTTTCTTCCACGG+CGG | + | chr7.2:45767485-45767504 | None:intergenic | 60.0% | |
| TCTTCCACGGCGGCGCTTGC+CGG | + | chr7.2:45767475-45767494 | None:intergenic | 70.0% | |
| CTTCCACGGCGGCGCTTGCC+GGG | + | chr7.2:45767474-45767493 | None:intergenic | 75.0% | |
| TTCCACGGCGGCGCTTGCCG+GGG | + | chr7.2:45767473-45767492 | None:intergenic | 75.0% | |
| !! | TTCCCCGGCAAGCGCCGCCG+TGG | - | chr7.2:45767468-45767487 | MS.gene45913:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 45766243 | 45768220 | 45766243 | ID=MS.gene45913 |
| chr7.2 | mRNA | 45766243 | 45768220 | 45766243 | ID=MS.gene45913.t1;Parent=MS.gene45913 |
| chr7.2 | exon | 45768106 | 45768220 | 45768106 | ID=MS.gene45913.t1.exon1;Parent=MS.gene45913.t1 |
| chr7.2 | CDS | 45768106 | 45768220 | 45768106 | ID=cds.MS.gene45913.t1;Parent=MS.gene45913.t1 |
| chr7.2 | exon | 45766934 | 45767129 | 45766934 | ID=MS.gene45913.t1.exon2;Parent=MS.gene45913.t1 |
| chr7.2 | CDS | 45766934 | 45767129 | 45766934 | ID=cds.MS.gene45913.t1;Parent=MS.gene45913.t1 |
| chr7.2 | exon | 45766410 | 45766566 | 45766410 | ID=MS.gene45913.t1.exon3;Parent=MS.gene45913.t1 |
| chr7.2 | CDS | 45766410 | 45766566 | 45766410 | ID=cds.MS.gene45913.t1;Parent=MS.gene45913.t1 |
| chr7.2 | exon | 45766243 | 45766290 | 45766243 | ID=MS.gene45913.t1.exon4;Parent=MS.gene45913.t1 |
| chr7.2 | CDS | 45766243 | 45766290 | 45766243 | ID=cds.MS.gene45913.t1;Parent=MS.gene45913.t1 |
| Gene Sequence |
| Protein sequence |
