AlfalfaGEDB | MS.gene68130

M. sativa cultivar XinJiangDaYe / MS.gene68130

KEGG: K02906
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00297.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68130.t1	XP_003604074.1	99.6	226	1	0	1	226	47	272	2.00E-122	448.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68130.t1	O80360	87.5	224	28	0	3	226	36	259	3.2e-108	392.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68130.t1	G7J8L6	99.6	226	1	0	1	226	47	272	1.5e-122	448.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene68130	0.825117	5.58E-54	-1.69E-46
MS.gene049171	MS.gene68130	0.843767	1.14E-58	-1.69E-46
MS.gene049173	MS.gene68130	0.835257	1.86E-56	-1.69E-46
MS.gene049217	MS.gene68130	0.832547	8.88E-56	-1.69E-46
MS.gene049222	MS.gene68130	0.853133	2.92E-61	-1.69E-46
MS.gene049285	MS.gene68130	0.856784	2.55E-62	-1.69E-46
MS.gene049320	MS.gene68130	0.83413	3.58E-56	-1.69E-46
MS.gene049351	MS.gene68130	0.807849	4.13E-50	-1.69E-46
MS.gene049369	MS.gene68130	0.822165	2.74E-53	-1.69E-46
MS.gene049389	MS.gene68130	0.804842	1.78E-49	-1.69E-46
MS.gene049427	MS.gene68130	0.889363	2.59E-73	-1.69E-46
MS.gene049491	MS.gene68130	0.81517	1.06E-51	-1.69E-46
MS.gene049609	MS.gene68130	0.880535	5.07E-70	-1.69E-46
MS.gene049614	MS.gene68130	0.828141	1.06E-54	-1.69E-46
MS.gene049615	MS.gene68130	0.800656	1.30E-48	-1.69E-46
MS.gene049633	MS.gene68130	0.812482	4.15E-51	-1.69E-46
MS.gene049661	MS.gene68130	0.821143	4.72E-53	-1.69E-46
MS.gene049662	MS.gene68130	0.81818	2.24E-52	-1.69E-46
MS.gene049760	MS.gene68130	0.821565	3.77E-53	-1.69E-46
MS.gene049805	MS.gene68130	0.879747	9.68E-70	-1.69E-46
MS.gene050076	MS.gene68130	0.832597	8.63E-56	-1.69E-46
MS.gene050163	MS.gene68130	0.846845	1.68E-59	-1.69E-46
MS.gene050165	MS.gene68130	0.825721	4.02E-54	-1.69E-46
MS.gene050301	MS.gene68130	0.838645	2.54E-57	-1.69E-46
MS.gene050333	MS.gene68130	0.85331	2.60E-61	-1.69E-46
MS.gene050397	MS.gene68130	0.810875	9.27E-51	-1.69E-46
MS.gene050432	MS.gene68130	0.866997	1.89E-65	-1.69E-46
MS.gene050464	MS.gene68130	0.81441	1.56E-51	-1.69E-46
MS.gene050504	MS.gene68130	0.808235	3.42E-50	-1.69E-46
MS.gene050518	MS.gene68130	0.832224	1.07E-55	-1.69E-46
MS.gene050529	MS.gene68130	0.840817	6.92E-58	-1.69E-46
MS.gene050538	MS.gene68130	0.813343	2.69E-51	-1.69E-46
MS.gene050593	MS.gene68130	0.897208	1.76E-76	-1.69E-46
MS.gene050612	MS.gene68130	0.817687	2.90E-52	-1.69E-46
MS.gene050662	MS.gene68130	0.801908	7.21E-49	-1.69E-46
MS.gene050670	MS.gene68130	0.86981	2.34E-66	-1.69E-46
MS.gene050675	MS.gene68130	0.825736	3.98E-54	-1.69E-46
MS.gene050686	MS.gene68130	0.811441	6.99E-51	-1.69E-46
MS.gene050699	MS.gene68130	0.814219	1.72E-51	-1.69E-46
MS.gene050747	MS.gene68130	0.84836	6.44E-60	-1.69E-46
MS.gene050767	MS.gene68130	0.899095	2.78E-77	-1.69E-46
MS.gene050770	MS.gene68130	0.901726	2.00E-78	-1.69E-46
MS.gene050772	MS.gene68130	0.895306	1.09E-75	-1.69E-46
MS.gene050783	MS.gene68130	0.809638	1.71E-50	-1.69E-46
MS.gene05080	MS.gene68130	0.839413	1.61E-57	-1.69E-46
MS.gene050812	MS.gene68130	0.82153	3.84E-53	-1.69E-46
MS.gene050950	MS.gene68130	0.848016	8.02E-60	-1.69E-46
MS.gene05100	MS.gene68130	0.822118	2.81E-53	-1.69E-46
MS.gene05101	MS.gene68130	0.863631	2.17E-64	-1.69E-46
MS.gene05105	MS.gene68130	0.891636	3.31E-74	-1.69E-46
MS.gene051228	MS.gene68130	0.885651	6.77E-72	-1.69E-46
MS.gene051387	MS.gene68130	0.877077	8.39E-69	-1.69E-46
MS.gene051434	MS.gene68130	0.833473	5.23E-56	-1.69E-46
MS.gene051471	MS.gene68130	0.814297	1.66E-51	-1.69E-46
MS.gene051582	MS.gene68130	0.805729	1.16E-49	-1.69E-46
MS.gene051617	MS.gene68130	0.817088	3.95E-52	-1.69E-46
MS.gene051666	MS.gene68130	0.893541	5.71E-75	-1.69E-46
MS.gene051692	MS.gene68130	0.81784	2.68E-52	-1.69E-46
MS.gene051694	MS.gene68130	0.83187	1.31E-55	-1.69E-46
MS.gene051810	MS.gene68130	0.837723	4.39E-57	-1.69E-46
MS.gene051858	MS.gene68130	0.860756	1.65E-63	-1.69E-46
MS.gene051874	MS.gene68130	0.804126	2.51E-49	-1.69E-46
MS.gene051949	MS.gene68130	0.824966	6.06E-54	-1.69E-46
MS.gene052078	MS.gene68130	0.846919	1.60E-59	-1.69E-46
MS.gene052188	MS.gene68130	0.835215	1.91E-56	-1.69E-46
MS.gene052271	MS.gene68130	0.864374	1.27E-64	-1.69E-46
MS.gene052290	MS.gene68130	0.84038	9.00E-58	-1.69E-46
MS.gene052293	MS.gene68130	0.803751	3.00E-49	-1.69E-46
MS.gene052310	MS.gene68130	0.890195	1.23E-73	-1.69E-46
MS.gene052322	MS.gene68130	0.822861	1.89E-53	-1.69E-46
MS.gene052326	MS.gene68130	0.816259	6.06E-52	-1.69E-46
MS.gene052340	MS.gene68130	0.81958	1.08E-52	-1.69E-46
MS.gene052379	MS.gene68130	0.87563	2.65E-68	-1.69E-46
MS.gene052421	MS.gene68130	0.853808	1.87E-61	-1.69E-46
MS.gene052481	MS.gene68130	0.843215	1.61E-58	-1.69E-46
MS.gene052484	MS.gene68130	0.868334	7.05E-66	-1.69E-46
MS.gene052485	MS.gene68130	0.822069	2.89E-53	-1.69E-46
MS.gene052508	MS.gene68130	0.820104	8.18E-53	-1.69E-46
MS.gene052510	MS.gene68130	0.825473	4.60E-54	-1.69E-46
MS.gene052615	MS.gene68130	0.838782	2.34E-57	-1.69E-46
MS.gene052870	MS.gene68130	0.846792	1.74E-59	-1.69E-46
MS.gene052872	MS.gene68130	0.837324	5.56E-57	-1.69E-46
MS.gene052916	MS.gene68130	0.837345	5.49E-57	-1.69E-46
MS.gene052966	MS.gene68130	0.804665	1.94E-49	-1.69E-46
MS.gene053009	MS.gene68130	0.884224	2.30E-71	-1.69E-46
MS.gene053103	MS.gene68130	0.891484	3.81E-74	-1.69E-46
MS.gene053104	MS.gene68130	0.90876	1.20E-81	-1.69E-46
MS.gene053107	MS.gene68130	0.858122	1.02E-62	-1.69E-46
MS.gene053207	MS.gene68130	0.869621	2.70E-66	-1.69E-46
MS.gene053209	MS.gene68130	0.86826	7.45E-66	-1.69E-46
MS.gene053213	MS.gene68130	0.86666	2.42E-65	-1.69E-46
MS.gene053286	MS.gene68130	0.855364	6.63E-62	-1.69E-46
MS.gene053322	MS.gene68130	0.919655	3.43E-87	-1.69E-46
MS.gene053384	MS.gene68130	0.842602	2.34E-58	-1.69E-46
MS.gene053449	MS.gene68130	0.834724	2.54E-56	-1.69E-46
MS.gene053557	MS.gene68130	0.802829	4.66E-49	-1.69E-46
MS.gene053574	MS.gene68130	0.857209	1.91E-62	-1.69E-46
MS.gene053579	MS.gene68130	0.800783	1.23E-48	-1.69E-46
MS.gene053632	MS.gene68130	0.831172	1.94E-55	-1.69E-46
MS.gene053813	MS.gene68130	0.809778	1.60E-50	-1.69E-46
MS.gene053824	MS.gene68130	0.819613	1.06E-52	-1.69E-46
MS.gene053912	MS.gene68130	0.803339	3.65E-49	-1.69E-46
MS.gene053916	MS.gene68130	0.84704	1.49E-59	-1.69E-46
MS.gene054123	MS.gene68130	0.81028	1.25E-50	-1.69E-46
MS.gene054376	MS.gene68130	0.898921	3.30E-77	-1.69E-46
MS.gene054543	MS.gene68130	0.806089	9.74E-50	-1.69E-46
MS.gene05455	MS.gene68130	0.803008	4.28E-49	-1.69E-46
MS.gene054595	MS.gene68130	0.802405	5.70E-49	-1.69E-46
MS.gene054600	MS.gene68130	0.846001	2.86E-59	-1.69E-46
MS.gene054642	MS.gene68130	0.878487	2.70E-69	-1.69E-46
MS.gene054802	MS.gene68130	0.861431	1.03E-63	-1.69E-46
MS.gene054803	MS.gene68130	0.859713	3.42E-63	-1.69E-46
MS.gene054804	MS.gene68130	0.864089	1.56E-64	-1.69E-46
MS.gene054927	MS.gene68130	0.813452	2.54E-51	-1.69E-46
MS.gene054954	MS.gene68130	0.80652	7.91E-50	-1.69E-46
MS.gene054955	MS.gene68130	0.828004	1.14E-54	-1.69E-46
MS.gene05505	MS.gene68130	0.87378	1.13E-67	-1.69E-46
MS.gene055116	MS.gene68130	0.857351	1.73E-62	-1.69E-46
MS.gene055206	MS.gene68130	0.866429	2.87E-65	-1.69E-46
MS.gene055212	MS.gene68130	0.808376	3.19E-50	-1.69E-46
MS.gene055224	MS.gene68130	0.829561	4.80E-55	-1.69E-46
MS.gene055254	MS.gene68130	0.833612	4.83E-56	-1.69E-46
MS.gene055277	MS.gene68130	0.841681	4.10E-58	-1.69E-46
MS.gene055289	MS.gene68130	0.827508	1.50E-54	-1.69E-46
MS.gene055362	MS.gene68130	0.828745	7.58E-55	-1.69E-46
MS.gene055397	MS.gene68130	0.876614	1.21E-68	-1.69E-46
MS.gene055412	MS.gene68130	0.843387	1.45E-58	-1.69E-46
MS.gene055422	MS.gene68130	0.810904	9.14E-51	-1.69E-46
MS.gene055499	MS.gene68130	0.87612	1.80E-68	-1.69E-46
MS.gene055502	MS.gene68130	0.840394	8.93E-58	-1.69E-46
MS.gene055536	MS.gene68130	-0.824729	6.89E-54	-1.69E-46
MS.gene055577	MS.gene68130	0.841324	5.09E-58	-1.69E-46
MS.gene055636	MS.gene68130	0.857125	2.02E-62	-1.69E-46
MS.gene055638	MS.gene68130	0.83164	1.49E-55	-1.69E-46
MS.gene055647	MS.gene68130	0.892833	1.10E-74	-1.69E-46
MS.gene055722	MS.gene68130	0.894855	1.66E-75	-1.69E-46
MS.gene055896	MS.gene68130	0.813305	2.74E-51	-1.69E-46
MS.gene05592	MS.gene68130	0.922141	1.44E-88	-1.69E-46
MS.gene055941	MS.gene68130	0.852498	4.44E-61	-1.69E-46
MS.gene055956	MS.gene68130	-0.807943	3.95E-50	-1.69E-46
MS.gene056083	MS.gene68130	0.866568	2.59E-65	-1.69E-46
MS.gene056374	MS.gene68130	0.858988	5.64E-63	-1.69E-46
MS.gene056407	MS.gene68130	0.853145	2.90E-61	-1.69E-46
MS.gene056410	MS.gene68130	0.847529	1.09E-59	-1.69E-46
MS.gene056422	MS.gene68130	0.82405	9.96E-54	-1.69E-46
MS.gene056510	MS.gene68130	0.803758	2.99E-49	-1.69E-46
MS.gene056511	MS.gene68130	0.845935	2.98E-59	-1.69E-46
MS.gene056549	MS.gene68130	0.817391	3.38E-52	-1.69E-46
MS.gene056609	MS.gene68130	0.860018	2.77E-63	-1.69E-46
MS.gene056657	MS.gene68130	0.835368	1.75E-56	-1.69E-46
MS.gene056692	MS.gene68130	0.816527	5.28E-52	-1.69E-46
MS.gene056796	MS.gene68130	0.847903	8.61E-60	-1.69E-46
MS.gene056897	MS.gene68130	0.891018	5.82E-74	-1.69E-46
MS.gene057011	MS.gene68130	0.897821	9.70E-77	-1.69E-46
MS.gene057076	MS.gene68130	0.834145	3.55E-56	-1.69E-46
MS.gene057123	MS.gene68130	0.8352	1.93E-56	-1.69E-46
MS.gene057124	MS.gene68130	0.829294	5.58E-55	-1.69E-46
MS.gene057129	MS.gene68130	0.909254	6.98E-82	-1.69E-46
MS.gene057146	MS.gene68130	0.864886	8.80E-65	-1.69E-46
MS.gene057246	MS.gene68130	0.812783	3.56E-51	-1.69E-46
MS.gene057295	MS.gene68130	0.822745	2.01E-53	-1.69E-46
MS.gene057331	MS.gene68130	0.9118	4.03E-83	-1.69E-46
MS.gene05735	MS.gene68130	0.834106	3.63E-56	-1.69E-46
MS.gene057416	MS.gene68130	0.907149	6.92E-81	-1.69E-46
MS.gene057450	MS.gene68130	0.805986	1.02E-49	-1.69E-46
MS.gene057658	MS.gene68130	0.802081	6.64E-49	-1.69E-46
MS.gene057734	MS.gene68130	0.813561	2.41E-51	-1.69E-46
MS.gene057926	MS.gene68130	0.824502	7.79E-54	-1.69E-46
MS.gene058006	MS.gene68130	0.834788	2.45E-56	-1.69E-46
MS.gene058019	MS.gene68130	0.878101	3.69E-69	-1.69E-46
MS.gene058082	MS.gene68130	0.847816	9.10E-60	-1.69E-46
MS.gene058130	MS.gene68130	0.818688	1.72E-52	-1.69E-46
MS.gene058233	MS.gene68130	0.814081	1.85E-51	-1.69E-46
MS.gene058293	MS.gene68130	0.897636	1.16E-76	-1.69E-46
MS.gene058323	MS.gene68130	0.877761	4.85E-69	-1.69E-46
MS.gene058365	MS.gene68130	0.809701	1.66E-50	-1.69E-46
MS.gene05837	MS.gene68130	0.816019	6.86E-52	-1.69E-46
MS.gene058419	MS.gene68130	0.860416	2.10E-63	-1.69E-46
MS.gene058544	MS.gene68130	0.833635	4.76E-56	-1.69E-46
MS.gene058660	MS.gene68130	0.87996	8.13E-70	-1.69E-46
MS.gene058700	MS.gene68130	0.823108	1.65E-53	-1.69E-46
MS.gene058723	MS.gene68130	0.84834	6.52E-60	-1.69E-46
MS.gene058748	MS.gene68130	0.806215	9.17E-50	-1.69E-46
MS.gene058773	MS.gene68130	0.849257	3.63E-60	-1.69E-46
MS.gene058787	MS.gene68130	0.820145	8.00E-53	-1.69E-46
MS.gene058838	MS.gene68130	0.817186	3.76E-52	-1.69E-46
MS.gene05883	MS.gene68130	0.822704	2.05E-53	-1.69E-46
MS.gene058928	MS.gene68130	0.810198	1.30E-50	-1.69E-46
MS.gene058993	MS.gene68130	0.803794	2.94E-49	-1.69E-46
MS.gene059022	MS.gene68130	0.812874	3.40E-51	-1.69E-46
MS.gene059023	MS.gene68130	0.829399	5.26E-55	-1.69E-46
MS.gene059029	MS.gene68130	0.872675	2.65E-67	-1.69E-46
MS.gene05907	MS.gene68130	0.821655	3.60E-53	-1.69E-46
MS.gene05913	MS.gene68130	0.830379	3.04E-55	-1.69E-46
MS.gene059326	MS.gene68130	0.859244	4.73E-63	-1.69E-46
MS.gene059342	MS.gene68130	0.801111	1.05E-48	-1.69E-46
MS.gene05934	MS.gene68130	0.855212	7.34E-62	-1.69E-46
MS.gene059366	MS.gene68130	0.825299	5.06E-54	-1.69E-46
MS.gene059536	MS.gene68130	0.913671	4.70E-84	-1.69E-46
MS.gene059597	MS.gene68130	0.822116	2.81E-53	-1.69E-46
MS.gene05959	MS.gene68130	0.82573	4.00E-54	-1.69E-46
MS.gene059676	MS.gene68130	0.891282	4.58E-74	-1.69E-46
MS.gene059677	MS.gene68130	0.833885	4.12E-56	-1.69E-46
MS.gene059688	MS.gene68130	0.89169	3.16E-74	-1.69E-46
MS.gene059692	MS.gene68130	0.890601	8.50E-74	-1.69E-46
MS.gene059695	MS.gene68130	0.894173	3.16E-75	-1.69E-46
MS.gene059711	MS.gene68130	0.834253	3.34E-56	-1.69E-46
MS.gene059718	MS.gene68130	0.862903	3.64E-64	-1.69E-46
MS.gene059756	MS.gene68130	0.805384	1.37E-49	-1.69E-46
MS.gene059894	MS.gene68130	0.805657	1.20E-49	-1.69E-46
MS.gene059902	MS.gene68130	0.860225	2.40E-63	-1.69E-46
MS.gene059960	MS.gene68130	0.935188	1.25E-96	-1.69E-46
MS.gene059974	MS.gene68130	0.800418	1.45E-48	-1.69E-46
MS.gene060193	MS.gene68130	0.864664	1.03E-64	-1.69E-46
MS.gene060336	MS.gene68130	-0.80575	1.15E-49	-1.69E-46
MS.gene060403	MS.gene68130	0.844135	9.12E-59	-1.69E-46
MS.gene060482	MS.gene68130	0.800426	1.45E-48	-1.69E-46
MS.gene060762	MS.gene68130	0.824376	8.35E-54	-1.69E-46
MS.gene060804	MS.gene68130	0.898314	5.99E-77	-1.69E-46
MS.gene060818	MS.gene68130	0.885513	7.62E-72	-1.69E-46
MS.gene060835	MS.gene68130	0.843492	1.36E-58	-1.69E-46
MS.gene060837	MS.gene68130	0.857296	1.80E-62	-1.69E-46
MS.gene06092	MS.gene68130	0.876517	1.31E-68	-1.69E-46
MS.gene061041	MS.gene68130	0.869933	2.14E-66	-1.69E-46
MS.gene061051	MS.gene68130	-0.861724	8.39E-64	-1.69E-46
MS.gene061134	MS.gene68130	0.806723	7.16E-50	-1.69E-46
MS.gene061150	MS.gene68130	0.876302	1.56E-68	-1.69E-46
MS.gene061154	MS.gene68130	0.82134	4.25E-53	-1.69E-46
MS.gene061200	MS.gene68130	0.914885	1.13E-84	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68130.t1	MTR_3g118210	99.558	226	1	0	1	226	47	272	9.90e-165	455
MS.gene68130.t1	MTR_6g006970	42.718	206	114	4	12	216	49	251	9.85e-47	156
MS.gene68130.t1	MTR_1g093060	40.777	206	118	4	12	216	102	304	1.06e-42	147

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68130.t1	AT2G43030	82.743	226	39	0	1	226	46	271	4.47e-130	368
MS.gene68130.t1	AT3G17465	37.037	216	133	3	11	225	77	290	2.47e-38	135

Find 78 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAACAATCTTAAGCTTTC+TGG	0.097361	3.1:-92902277	None:intergenic
AAAGAGACTAATTAATTCTT+TGG	0.209215	3.1:-92902402	None:intergenic
AAAGCTCATCATTCCCAATT+TGG	0.228676	3.1:-92901687	None:intergenic
CAAATTGACCAAACCTGAAA+TGG	0.282604	3.1:+92901844	MS.gene68130:CDS
CATTCCTATGCGACATCTTC+AGG	0.315485	3.1:+92901889	MS.gene68130:CDS
ATGATCAAAGGTGCTCTTCC+TGG	0.365904	3.1:+92902324	MS.gene68130:CDS
TTTCGTCTTCAATCCGTTGA+TGG	0.384156	3.1:+92901914	MS.gene68130:CDS
TCAAATACAAGGCGCTGATT+AGG	0.398930	3.1:-92901944	None:intergenic
AAGATGACCCATTTCAGGTT+TGG	0.399688	3.1:-92901852	None:intergenic
CTCTTGGAACCATGGCTCAT+TGG	0.403785	3.1:-92902156	None:intergenic
TGGTGTGATGGGTACCAAAT+TGG	0.414953	3.1:+92901673	MS.gene68130:CDS
GTTGTTCCCGTCACTGTTGT+CGG	0.415769	3.1:+92901728	MS.gene68130:CDS
GGTGATCTTGTTGATGTCTC+TGG	0.428399	3.1:+92901983	MS.gene68130:CDS
AAGCTTTCTGGTCTTCCTGT+TGG	0.434373	3.1:-92902265	None:intergenic
ACGCCGTCCAAGTTGGTTAC+CGG	0.438083	3.1:+92901807	MS.gene68130:CDS
TCCAAGTTGTCTGTGACTCT+TGG	0.442433	3.1:-92902172	None:intergenic
TCCAAGAGTCACAGACAACT+TGG	0.460086	3.1:+92902171	MS.gene68130:CDS
TTCTTGCCAACAATCTTAGC+GGG	0.460342	3.1:-92902375	None:intergenic
ACTGTTGTCGGTTTCAAAGA+AGG	0.461503	3.1:+92901740	MS.gene68130:CDS
AGAGGCTGGTGTTGGTGTGA+TGG	0.463975	3.1:+92901661	MS.gene68130:CDS
TACACCTGGTCGCGTATACA+AGG	0.469173	3.1:+92902212	MS.gene68130:CDS
TTTCAGGTTTGGTCAATTTG+CGG	0.469193	3.1:-92901841	None:intergenic
GTTGTAACCGTCGGTGGCGT+CGG	0.473671	3.1:-92901786	None:intergenic
AAAGAAGATGCCTGGTAGGA+TGG	0.474224	3.1:+92902236	MS.gene68130:CDS
GAGGCTGGTGTTGGTGTGAT+GGG	0.474712	3.1:+92901662	MS.gene68130:CDS
TAACCCTCCGGTAACCAACT+TGG	0.478957	3.1:-92901814	None:intergenic
CACAGACAACTTGGATCCAT+TGG	0.481197	3.1:+92902180	MS.gene68130:CDS
GTAGGATGGGTGGAACCAAC+AGG	0.493432	3.1:+92902250	MS.gene68130:CDS
TACGCGACCAGGTGTAGTTC+CGG	0.494636	3.1:-92902205	None:intergenic
TTTCCCTTGTATACGCGACC+AGG	0.499382	3.1:-92902216	None:intergenic
AGAAGATTACCAGGCTTACC+AGG	0.500896	3.1:-92902342	None:intergenic
TGAAATGGGTCATCTTGAAA+AGG	0.503372	3.1:+92901859	MS.gene68130:CDS
ACGGGAACAACTTCACCGTT+AGG	0.508452	3.1:-92901716	None:intergenic
AAGAAGATGCCTGGTAGGAT+GGG	0.509948	3.1:+92902237	MS.gene68130:CDS
GGTGTGATGGGTACCAAATT+GGG	0.512034	3.1:+92901674	MS.gene68130:CDS
AAATTGACCAAACCTGAAAT+GGG	0.513032	3.1:+92901845	MS.gene68130:CDS
TTGAAACCGACAACAGTGAC+GGG	0.513527	3.1:-92901734	None:intergenic
GGTGCTCTTCCTGGTAAGCC+TGG	0.514459	3.1:+92902333	MS.gene68130:CDS
AAGCGTCATAACTTCAAAAG+AGG	0.517261	3.1:+92902132	MS.gene68130:CDS
AGGTGTAGTTCCGGCACCAA+TGG	0.518535	3.1:-92902196	None:intergenic
TTGGTTCCACCCATCCTACC+AGG	0.519178	3.1:-92902246	None:intergenic
ATGGGTCATCTTGAAAAGGT+TGG	0.519826	3.1:+92901863	MS.gene68130:CDS
GATGTCTCTGGCACCACCAT+CGG	0.522268	3.1:+92901995	MS.gene68130:CDS
GGTGGTGAAAATGAGCTTAG+AGG	0.522460	3.1:+92901643	MS.gene68130:CDS
GTAAGCCTGGTAATCTTCTA+CGG	0.530779	3.1:+92902346	MS.gene68130:CDS
GAACAACTTCACCGTTAGGT+TGG	0.533148	3.1:-92901712	None:intergenic
CTCTGGCACCACCATCGGCA+AGG	0.534330	3.1:+92902000	MS.gene68130:CDS
TACAAGGGAAAGAAGATGCC+TGG	0.536322	3.1:+92902228	MS.gene68130:CDS
GTCTGTGACTCTTGGAACCA+TGG	0.543733	3.1:-92902164	None:intergenic
CTGAAGATGTCGCATAGGAA+TGG	0.560330	3.1:-92901888	None:intergenic
CAACTTGGATCCATTGGTGC+CGG	0.569215	3.1:+92902186	MS.gene68130:CDS
ATTTGCGGTCTCTAACCCTC+CGG	0.569415	3.1:-92901826	None:intergenic
ATTAGGTTCAAAACCATCAA+CGG	0.570807	3.1:-92901927	None:intergenic
TCTGGCACCACCATCGGCAA+GGG	0.572275	3.1:+92902001	MS.gene68130:CDS
CTTAATGTTATCATGATCAA+AGG	0.572918	3.1:+92902312	MS.gene68130:CDS
ATTGGTGCCGGAACTACACC+TGG	0.580799	3.1:+92902198	MS.gene68130:CDS
TTTGAAACCGACAACAGTGA+CGG	0.586413	3.1:-92901735	None:intergenic
CCGTCCAAGTTGGTTACCGG+AGG	0.591201	3.1:+92901810	MS.gene68130:CDS
GTTCTTGCCAACAATCTTAG+CGG	0.594511	3.1:-92902376	None:intergenic
AAGATGCCTGGTAGGATGGG+TGG	0.594546	3.1:+92902240	MS.gene68130:CDS
ACCTTGAAAACCCTTGCCGA+TGG	0.600155	3.1:-92902011	None:intergenic
TGAAAAGCTCATCAAATACA+AGG	0.600821	3.1:-92901955	None:intergenic
GCTATCCGTAGAAGATTACC+AGG	0.602366	3.1:-92902351	None:intergenic
AGGGAAAGAAGATGCCTGGT+AGG	0.605040	3.1:+92902232	MS.gene68130:CDS
TTGAAAACCCTTGCCGATGG+TGG	0.607518	3.1:-92902008	None:intergenic
ATCAAAACCGACGCCACCGA+CGG	0.609949	3.1:+92901779	MS.gene68130:CDS
GGTTACAACGCCGTCCAAGT+TGG	0.618166	3.1:+92901800	MS.gene68130:CDS
GTGAAAATGAGCTTAGAGGC+TGG	0.634928	3.1:+92901647	MS.gene68130:CDS
TCTTGCCAACAATCTTAGCG+GGG	0.638407	3.1:-92902374	None:intergenic
CCTCCGGTAACCAACTTGGA+CGG	0.639997	3.1:-92901810	None:intergenic
ATGAGCTTAGAGGCTGGTGT+TGG	0.640133	3.1:+92901653	MS.gene68130:CDS
AAAAGAGGACCAATGAGCCA+TGG	0.640937	3.1:+92902147	MS.gene68130:CDS
CGTCCAAGTTGGTTACCGGA+GGG	0.643249	3.1:+92901811	MS.gene68130:CDS
CTTGCCAACAATCTTAGCGG+GGG	0.643846	3.1:-92902373	None:intergenic
GACGGCGTTGTAACCGTCGG+TGG	0.648118	3.1:-92901792	None:intergenic
AACTCCTGAAGATGTCGCAT+AGG	0.655881	3.1:-92901893	None:intergenic
TTGGACGGCGTTGTAACCGT+CGG	0.663802	3.1:-92901795	None:intergenic
ACACCTGGTCGCGTATACAA+GGG	0.687415	3.1:+92902213	MS.gene68130:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAATATCTTTCACTAA+TGG	+	chr3.1:92902079-92902098	MS.gene68130:intron	15.0%
!	CTTAATGTTATCATGATCAA+AGG	+	chr3.1:92902312-92902331	MS.gene68130:CDS	25.0%
!	TTTAACAATCTTAAGCTTTC+TGG	-	chr3.1:92902280-92902299	None:intergenic	25.0%
	AAATTGACCAAACCTGAAAT+GGG	+	chr3.1:92901845-92901864	MS.gene68130:CDS	30.0%
	ATGAACTTACTTACTTTGAC+AGG	+	chr3.1:92902102-92902121	MS.gene68130:intron	30.0%
	ATTAGGTTCAAAACCATCAA+CGG	-	chr3.1:92901930-92901949	None:intergenic	30.0%
	TATCAACTCAACAACTAGAA+GGG	-	chr3.1:92902062-92902081	None:intergenic	30.0%
	TGAAAAGCTCATCAAATACA+AGG	-	chr3.1:92901958-92901977	None:intergenic	30.0%
	TTATCAACTCAACAACTAGA+AGG	-	chr3.1:92902063-92902082	None:intergenic	30.0%
!	TTTGATGAGCTTTTCAATGA+AGG	+	chr3.1:92901962-92901981	MS.gene68130:CDS	30.0%
	AAAGCTCATCATTCCCAATT+TGG	-	chr3.1:92901690-92901709	None:intergenic	35.0%
	AACTTACTTACTTTGACAGG+TGG	+	chr3.1:92902105-92902124	MS.gene68130:intron	35.0%
	AAGCGTCATAACTTCAAAAG+AGG	+	chr3.1:92902132-92902151	MS.gene68130:CDS	35.0%
	CAAATTGACCAAACCTGAAA+TGG	+	chr3.1:92901844-92901863	MS.gene68130:CDS	35.0%
	TGAAATGGGTCATCTTGAAA+AGG	+	chr3.1:92901859-92901878	MS.gene68130:CDS	35.0%
!!	ATGAGCTTTTTCCAACCTAA+CGG	+	chr3.1:92901701-92901720	MS.gene68130:CDS	35.0%
!!	TTTCAGGTTTGGTCAATTTG+CGG	-	chr3.1:92901844-92901863	None:intergenic	35.0%
!!	TTTTCAAGATGACCCATTTC+AGG	-	chr3.1:92901860-92901879	None:intergenic	35.0%
	AACTAGAAGGGAATGCAAAG+AGG	-	chr3.1:92902050-92902069	None:intergenic	40.0%
	ACTAGAAGGGAATGCAAAGA+GGG	-	chr3.1:92902049-92902068	None:intergenic	40.0%
	ATGGGTCATCTTGAAAAGGT+TGG	+	chr3.1:92901863-92901882	MS.gene68130:CDS	40.0%
	GTAAGCCTGGTAATCTTCTA+CGG	+	chr3.1:92902346-92902365	MS.gene68130:CDS	40.0%
	GTTCTTGCCAACAATCTTAG+CGG	-	chr3.1:92902379-92902398	None:intergenic	40.0%
	TTCTTGCCAACAATCTTAGC+GGG	-	chr3.1:92902378-92902397	None:intergenic	40.0%
	TTTCGTCTTCAATCCGTTGA+TGG	+	chr3.1:92901914-92901933	MS.gene68130:CDS	40.0%
!	TTTGAAACCGACAACAGTGA+CGG	-	chr3.1:92901738-92901757	None:intergenic	40.0%
!!	AAGATGACCCATTTCAGGTT+TGG	-	chr3.1:92901855-92901874	None:intergenic	40.0%
!!	ACTGTTGTCGGTTTCAAAGA+AGG	+	chr3.1:92901740-92901759	MS.gene68130:CDS	40.0%
!!	TCAAATACAAGGCGCTGATT+AGG	-	chr3.1:92901947-92901966	None:intergenic	40.0%
	AAAAGAGGACCAATGAGCCA+TGG	+	chr3.1:92902147-92902166	MS.gene68130:CDS	45.0%
	AAAGAAGATGCCTGGTAGGA+TGG	+	chr3.1:92902236-92902255	MS.gene68130:CDS	45.0%
	AACTCCTGAAGATGTCGCAT+AGG	-	chr3.1:92901896-92901915	None:intergenic	45.0%
	AAGAAGATGCCTGGTAGGAT+GGG	+	chr3.1:92902237-92902256	MS.gene68130:CDS	45.0%
	AGAAGATTACCAGGCTTACC+AGG	-	chr3.1:92902345-92902364	None:intergenic	45.0%
	CACAGACAACTTGGATCCAT+TGG	+	chr3.1:92902180-92902199	MS.gene68130:CDS	45.0%
	CATTCCTATGCGACATCTTC+AGG	+	chr3.1:92901889-92901908	MS.gene68130:CDS	45.0%
	CTGAAGATGTCGCATAGGAA+TGG	-	chr3.1:92901891-92901910	None:intergenic	45.0%
	GAACAACTTCACCGTTAGGT+TGG	-	chr3.1:92901715-92901734	None:intergenic	45.0%
	GCTATCCGTAGAAGATTACC+AGG	-	chr3.1:92902354-92902373	None:intergenic	45.0%
	GGTGATCTTGTTGATGTCTC+TGG	+	chr3.1:92901983-92902002	MS.gene68130:CDS	45.0%
	GGTGGTGAAAATGAGCTTAG+AGG	+	chr3.1:92901643-92901662	MS.gene68130:CDS	45.0%
	GTGAAAATGAGCTTAGAGGC+TGG	+	chr3.1:92901647-92901666	MS.gene68130:CDS	45.0%
	TACAAGGGAAAGAAGATGCC+TGG	+	chr3.1:92902228-92902247	MS.gene68130:CDS	45.0%
	TCCAAGAGTCACAGACAACT+TGG	+	chr3.1:92902171-92902190	MS.gene68130:CDS	45.0%
	TCCAAGTTGTCTGTGACTCT+TGG	-	chr3.1:92902175-92902194	None:intergenic	45.0%
	TCTTGCCAACAATCTTAGCG+GGG	-	chr3.1:92902377-92902396	None:intergenic	45.0%
	TTGAAACCGACAACAGTGAC+GGG	-	chr3.1:92901737-92901756	None:intergenic	45.0%
!	AAGCTTTCTGGTCTTCCTGT+TGG	-	chr3.1:92902268-92902287	None:intergenic	45.0%
!!	ATGATCAAAGGTGCTCTTCC+TGG	+	chr3.1:92902324-92902343	MS.gene68130:CDS	45.0%
!!	GGTGTGATGGGTACCAAATT+GGG	+	chr3.1:92901674-92901693	MS.gene68130:CDS	45.0%
!!	TGGTGTGATGGGTACCAAAT+TGG	+	chr3.1:92901673-92901692	MS.gene68130:CDS	45.0%
	ACACCTGGTCGCGTATACAA+GGG	+	chr3.1:92902213-92902232	MS.gene68130:CDS	50.0%
	ACCTTGAAAACCCTTGCCGA+TGG	-	chr3.1:92902014-92902033	None:intergenic	50.0%
	ACGGGAACAACTTCACCGTT+AGG	-	chr3.1:92901719-92901738	None:intergenic	50.0%
	AGGGAAAGAAGATGCCTGGT+AGG	+	chr3.1:92902232-92902251	MS.gene68130:CDS	50.0%
	ATAGCCCCCGCTAAGATTGT+TGG	+	chr3.1:92902369-92902388	MS.gene68130:CDS	50.0%
	ATGAGCTTAGAGGCTGGTGT+TGG	+	chr3.1:92901653-92901672	MS.gene68130:CDS	50.0%
	ATTTGCGGTCTCTAACCCTC+CGG	-	chr3.1:92901829-92901848	None:intergenic	50.0%
	CAACTTGGATCCATTGGTGC+CGG	+	chr3.1:92902186-92902205	MS.gene68130:CDS	50.0%
	CTCTTGGAACCATGGCTCAT+TGG	-	chr3.1:92902159-92902178	None:intergenic	50.0%
	CTTGCCAACAATCTTAGCGG+GGG	-	chr3.1:92902376-92902395	None:intergenic	50.0%
	GTCTGTGACTCTTGGAACCA+TGG	-	chr3.1:92902167-92902186	None:intergenic	50.0%
	GTTGTTCCCGTCACTGTTGT+CGG	+	chr3.1:92901728-92901747	MS.gene68130:CDS	50.0%
	TAACCCTCCGGTAACCAACT+TGG	-	chr3.1:92901817-92901836	None:intergenic	50.0%
	TACACCTGGTCGCGTATACA+AGG	+	chr3.1:92902212-92902231	MS.gene68130:CDS	50.0%
	TTGAAAACCCTTGCCGATGG+TGG	-	chr3.1:92902011-92902030	None:intergenic	50.0%
	TTTCCCTTGTATACGCGACC+AGG	-	chr3.1:92902219-92902238	None:intergenic	50.0%
!	ACCATCGGCAAGGGTTTTCA+AGG	+	chr3.1:92902010-92902029	MS.gene68130:CDS	50.0%
	AAGATGCCTGGTAGGATGGG+TGG	+	chr3.1:92902240-92902259	MS.gene68130:CDS	55.0%
	AGGTGTAGTTCCGGCACCAA+TGG	-	chr3.1:92902199-92902218	None:intergenic	55.0%
	ATCAAAACCGACGCCACCGA+CGG	+	chr3.1:92901779-92901798	MS.gene68130:CDS	55.0%
	CCTCCGGTAACCAACTTGGA+CGG	-	chr3.1:92901813-92901832	None:intergenic	55.0%
	GATGTCTCTGGCACCACCAT+CGG	+	chr3.1:92901995-92902014	MS.gene68130:CDS	55.0%
	GGTTACAACGCCGTCCAAGT+TGG	+	chr3.1:92901800-92901819	MS.gene68130:CDS	55.0%
	GTAGGATGGGTGGAACCAAC+AGG	+	chr3.1:92902250-92902269	MS.gene68130:CDS	55.0%
	TACGCGACCAGGTGTAGTTC+CGG	-	chr3.1:92902208-92902227	None:intergenic	55.0%
	TTGGACGGCGTTGTAACCGT+CGG	-	chr3.1:92901798-92901817	None:intergenic	55.0%
	TTGGTTCCACCCATCCTACC+AGG	-	chr3.1:92902249-92902268	None:intergenic	55.0%
!!	ACGCCGTCCAAGTTGGTTAC+CGG	+	chr3.1:92901807-92901826	MS.gene68130:CDS	55.0%
!!	AGAGGCTGGTGTTGGTGTGA+TGG	+	chr3.1:92901661-92901680	MS.gene68130:CDS	55.0%
!!	ATTGGTGCCGGAACTACACC+TGG	+	chr3.1:92902198-92902217	MS.gene68130:CDS	55.0%
!!	CGTCCAAGTTGGTTACCGGA+GGG	+	chr3.1:92901811-92901830	MS.gene68130:CDS	55.0%
!!	GAGGCTGGTGTTGGTGTGAT+GGG	+	chr3.1:92901662-92901681	MS.gene68130:CDS	55.0%
	GGTGCTCTTCCTGGTAAGCC+TGG	+	chr3.1:92902333-92902352	MS.gene68130:CDS	60.0%
	GTTGTAACCGTCGGTGGCGT+CGG	-	chr3.1:92901789-92901808	None:intergenic	60.0%
	TCTGGCACCACCATCGGCAA+GGG	+	chr3.1:92902001-92902020	MS.gene68130:CDS	60.0%
!!	CCGTCCAAGTTGGTTACCGG+AGG	+	chr3.1:92901810-92901829	MS.gene68130:CDS	60.0%
	CTCTGGCACCACCATCGGCA+AGG	+	chr3.1:92902000-92902019	MS.gene68130:CDS	65.0%
	GACGGCGTTGTAACCGTCGG+TGG	-	chr3.1:92901795-92901814	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	92901641	92902413	92901641	ID=MS.gene68130
chr3.1	mRNA	92901641	92902413	92901641	ID=MS.gene68130.t1;Parent=MS.gene68130
chr3.1	exon	92901641	92902031	92901641	ID=MS.gene68130.t1.exon1;Parent=MS.gene68130.t1
chr3.1	CDS	92901641	92902031	92901641	ID=cds.MS.gene68130.t1;Parent=MS.gene68130.t1
chr3.1	exon	92902124	92902413	92902124	ID=MS.gene68130.t1.exon2;Parent=MS.gene68130.t1
chr3.1	CDS	92902124	92902413	92902124	ID=cds.MS.gene68130.t1;Parent=MS.gene68130.t1

Gene Sequence

>MS.gene68130

ATGGTGGTGAAAATGAGCTTAGAGGCTGGTGTTGGTGTGATGGGTACCAAATTGGGAATGATGAGCTTTTTCCAACCTAACGGTGAAGTTGTTCCCGTCACTGTTGTCGGTTTCAAAGAAGGCAACATCGTCACTCAAATCAAAACCGACGCCACCGACGGTTACAACGCCGTCCAAGTTGGTTACCGGAGGGTTAGAGACCGCAAATTGACCAAACCTGAAATGGGTCATCTTGAAAAGGTTGGAGCCATTCCTATGCGACATCTTCAGGAGTTTCGTCTTCAATCCGTTGATGGTTTTGAACCTAATCAGCGCCTTGTATTTGATGAGCTTTTCAATGAAGGTGATCTTGTTGATGTCTCTGGCACCACCATCGGCAAGGGTTTTCAAGGTCTGTAACTCTCTCCCTCTTTGCATTCCCTTCTAGTTGTTGAGTTGATAATAATATCTTTCACTAATGGATGAACTTACTTACTTTGACAGGTGGTATCAAGCGTCATAACTTCAAAAGAGGACCAATGAGCCATGGTTCCAAGAGTCACAGACAACTTGGATCCATTGGTGCCGGAACTACACCTGGTCGCGTATACAAGGGAAAGAAGATGCCTGGTAGGATGGGTGGAACCAACAGGAAGACCAGAAAGCTTAAGATTGTTAAAATTGATAAAGATCTTAATGTTATCATGATCAAAGGTGCTCTTCCTGGTAAGCCTGGTAATCTTCTACGGATAGCCCCCGCTAAGATTGTTGGCAAGAACATTCCAAAGAATTAA

Protein sequence

>MS.gene68130.t1

MVVKMSLEAGVGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPEMGHLEKVGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN