Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194510 | KEH36682.1 | 82.639 | 144 | 7 | 1 | 19 | 144 | 217 | 360 | 4.74e-78 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194510 | sp|O64811|SCP9_ARATH | 55.245 | 143 | 45 | 2 | 20 | 144 | 296 | 437 | 1.53e-44 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194510 | A0A072V4C5 | 82.639 | 144 | 7 | 1 | 19 | 144 | 217 | 360 | 2.26e-78 | 245 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008330 | Msa0194510 | 0.804774 | 1.838526e-49 | -8.615850e-47 |
| Msa0011720 | Msa0194510 | 0.824102 | 9.681143e-54 | -8.615850e-47 |
| Msa0027540 | Msa0194510 | 0.805575 | 1.249679e-49 | -8.615850e-47 |
| Msa0030590 | Msa0194510 | 0.821417 | 4.083152e-53 | -8.615850e-47 |
| Msa0074230 | Msa0194510 | 0.811538 | 6.659564e-51 | -8.615850e-47 |
| Msa0075310 | Msa0194510 | 0.806419 | 8.301870e-50 | -8.615850e-47 |
| Msa0083160 | Msa0194510 | 0.800148 | 1.651063e-48 | -8.615850e-47 |
| Msa0094420 | Msa0194510 | 0.802309 | 5.962649e-49 | -8.615850e-47 |
| Msa0114250 | Msa0194510 | 0.800742 | 1.249327e-48 | -8.615850e-47 |
| Msa0125440 | Msa0194510 | 0.820636 | 6.178628e-53 | -8.615850e-47 |
| Msa0125530 | Msa0194510 | 0.802745 | 4.850174e-49 | -8.615850e-47 |
| Msa0128370 | Msa0194510 | 0.825568 | 4.365559e-54 | -8.615850e-47 |
| Msa0140910 | Msa0194510 | 0.817469 | 3.245277e-52 | -8.615850e-47 |
| Msa0141670 | Msa0194510 | 0.814101 | 1.828685e-51 | -8.615850e-47 |
| Msa0147550 | Msa0194510 | 0.809099 | 2.236712e-50 | -8.615850e-47 |
| Msa0162030 | Msa0194510 | 0.815819 | 7.603539e-52 | -8.615850e-47 |
| Msa0162050 | Msa0194510 | 0.803591 | 3.240261e-49 | -8.615850e-47 |
| Msa0162070 | Msa0194510 | 0.813894 | 2.031696e-51 | -8.615850e-47 |
| Msa0168100 | Msa0194510 | 0.829984 | 3.791477e-55 | -8.615850e-47 |
| Msa0168390 | Msa0194510 | 0.805395 | 1.362909e-49 | -8.615850e-47 |
| Msa0174560 | Msa0194510 | 0.813494 | 2.488401e-51 | -8.615850e-47 |
| Msa0187900 | Msa0194510 | 0.970902 | 2.504401e-132 | -8.615850e-47 |
| Msa0194510 | Msa0207180 | 0.829220 | 5.815833e-55 | -8.615850e-47 |
| Msa0194510 | Msa0244740 | 0.811363 | 7.269725e-51 | -8.615850e-47 |
| Msa0194510 | Msa0260960 | 0.810196 | 1.299984e-50 | -8.615850e-47 |
| Msa0194510 | Msa0260970 | 0.828535 | 8.519409e-55 | -8.615850e-47 |
| Msa0194510 | Msa0269360 | 0.814904 | 1.214492e-51 | -8.615850e-47 |
| Msa0194510 | Msa0290950 | 0.809630 | 1.720512e-50 | -8.615850e-47 |
| Msa0194510 | Msa0290970 | 0.806118 | 9.609195e-50 | -8.615850e-47 |
| Msa0194510 | Msa0296610 | 0.807375 | 5.212092e-50 | -8.615850e-47 |
| Msa0194510 | Msa0298940 | 0.812869 | 3.412092e-51 | -8.615850e-47 |
| Msa0194510 | Msa0315480 | 0.820073 | 8.314137e-53 | -8.615850e-47 |
| Msa0194510 | Msa0330270 | 0.815904 | 7.279905e-52 | -8.615850e-47 |
| Msa0194510 | Msa0342200 | 0.809158 | 2.172470e-50 | -8.615850e-47 |
| Msa0194510 | Msa0349460 | 0.805883 | 1.076453e-49 | -8.615850e-47 |
| Msa0194510 | Msa0351230 | 0.806627 | 7.505359e-50 | -8.615850e-47 |
| Msa0194510 | Msa0371540 | 0.806919 | 6.508868e-50 | -8.615850e-47 |
| Msa0194510 | Msa0371610 | 0.836463 | 9.222028e-57 | -8.615850e-47 |
| Msa0194510 | Msa0380920 | 0.802873 | 4.562184e-49 | -8.615850e-47 |
| Msa0194510 | Msa0413740 | 0.846663 | 1.885949e-59 | -8.615850e-47 |
| Msa0194510 | Msa0430820 | 0.814031 | 1.895191e-51 | -8.615850e-47 |
| Msa0194510 | Msa0437710 | 0.800547 | 1.369515e-48 | -8.615850e-47 |
| Msa0194510 | Msa0458790 | 0.802603 | 5.187898e-49 | -8.615850e-47 |
| Msa0194510 | Msa0467920 | -0.801490 | 8.786663e-49 | -8.615850e-47 |
| Msa0194510 | Msa0505390 | 0.847590 | 1.050259e-59 | -8.615850e-47 |
| Msa0194510 | Msa0508200 | 0.804373 | 2.228730e-49 | -8.615850e-47 |
| Msa0194510 | Msa0517340 | 0.818793 | 1.628117e-52 | -8.615850e-47 |
| Msa0194510 | Msa0524050 | 0.827776 | 1.297907e-54 | -8.615850e-47 |
| Msa0194510 | Msa0525240 | 0.819095 | 1.390556e-52 | -8.615850e-47 |
| Msa0194510 | Msa0530930 | 0.831911 | 1.276380e-55 | -8.615850e-47 |
| Msa0194510 | Msa0540320 | 0.813586 | 2.374315e-51 | -8.615850e-47 |
| Msa0194510 | Msa0549740 | 0.800034 | 1.741250e-48 | -8.615850e-47 |
| Msa0194510 | Msa0557630 | 0.812928 | 3.312527e-51 | -8.615850e-47 |
| Msa0194510 | Msa0575250 | 0.809062 | 2.277760e-50 | -8.615850e-47 |
| Msa0194510 | Msa0581340 | 0.831838 | 1.330586e-55 | -8.615850e-47 |
| Msa0194510 | Msa0582110 | 0.805388 | 1.367651e-49 | -8.615850e-47 |
| Msa0194510 | Msa0583590 | 0.816099 | 6.583590e-52 | -8.615850e-47 |
| Msa0194510 | Msa0591780 | 0.802180 | 6.339283e-49 | -8.615850e-47 |
| Msa0194510 | Msa0596100 | 0.806670 | 7.348041e-50 | -8.615850e-47 |
| Msa0194510 | Msa0603680 | 0.808637 | 2.808675e-50 | -8.615850e-47 |
| Msa0194510 | Msa0617370 | 0.809560 | 1.781222e-50 | -8.615850e-47 |
| Msa0194510 | Msa0619330 | 0.804716 | 1.890482e-49 | -8.615850e-47 |
| Msa0194510 | Msa0621890 | 0.822213 | 2.671568e-53 | -8.615850e-47 |
| Msa0194510 | Msa0622390 | 0.811576 | 6.532534e-51 | -8.615850e-47 |
| Msa0194510 | Msa0624730 | 0.807906 | 4.020449e-50 | -8.615850e-47 |
| Msa0194510 | Msa0626230 | 0.841994 | 3.388845e-58 | -8.615850e-47 |
| Msa0194510 | Msa0652980 | 0.814659 | 1.376594e-51 | -8.615850e-47 |
| Msa0194510 | Msa0674220 | 0.809599 | 1.747576e-50 | -8.615850e-47 |
| Msa0194510 | Msa0674300 | 0.806476 | 8.076009e-50 | -8.615850e-47 |
| Msa0194510 | Msa0678240 | 0.823045 | 1.710522e-53 | -8.615850e-47 |
| Msa0194510 | Msa0690350 | 0.809793 | 1.587615e-50 | -8.615850e-47 |
| Msa0194510 | Msa0697140 | 0.815774 | 7.781764e-52 | -8.615850e-47 |
| Msa0194510 | Msa0719340 | 0.812443 | 4.228792e-51 | -8.615850e-47 |
| Msa0194510 | Msa0730180 | 0.808137 | 3.590726e-50 | -8.615850e-47 |
| Msa0194510 | Msa0740420 | 0.805559 | 1.259094e-49 | -8.615850e-47 |
| Msa0194510 | Msa0756480 | 0.830984 | 2.158168e-55 | -8.615850e-47 |
| Msa0194510 | Msa0770430 | 0.824431 | 8.100095e-54 | -8.615850e-47 |
| Msa0194510 | Msa0772150 | 0.810910 | 9.111866e-51 | -8.615850e-47 |
| Msa0194510 | Msa0780140 | 0.801294 | 9.636069e-49 | -8.615850e-47 |
| Msa0194510 | Msa0792510 | 0.818201 | 2.217782e-52 | -8.615850e-47 |
| Msa0194510 | Msa0820670 | 0.820984 | 5.136594e-53 | -8.615850e-47 |
| Msa0194510 | Msa0835510 | 0.809532 | 1.806063e-50 | -8.615850e-47 |
| Msa0194510 | Msa0863250 | 0.802868 | 4.572604e-49 | -8.615850e-47 |
| Msa0194510 | Msa0887070 | 0.803662 | 3.133047e-49 | -8.615850e-47 |
| Msa0194510 | Msa0890250 | 0.815632 | 8.370524e-52 | -8.615850e-47 |
| Msa0194510 | Msa0896210 | 0.820309 | 7.341099e-53 | -8.615850e-47 |
| Msa0194510 | Msa0903730 | 0.821818 | 3.297982e-53 | -8.615850e-47 |
| Msa0194510 | Msa0929400 | 0.813378 | 2.638006e-51 | -8.615850e-47 |
| Msa0194510 | Msa0937940 | 0.818571 | 1.828379e-52 | -8.615850e-47 |
| Msa0194510 | Msa0950620 | 0.825454 | 4.647334e-54 | -8.615850e-47 |
| Msa0194510 | Msa0951720 | 0.817980 | 2.488254e-52 | -8.615850e-47 |
| Msa0194510 | Msa0975080 | 0.811947 | 5.425615e-51 | -8.615850e-47 |
| Msa0194510 | Msa0978000 | 0.800795 | 1.218788e-48 | -8.615850e-47 |
| Msa0194510 | Msa0980440 | 0.801359 | 9.346902e-49 | -8.615850e-47 |
| Msa0194510 | Msa0984720 | 0.812172 | 4.847225e-51 | -8.615850e-47 |
| Msa0194510 | Msa1008490 | 0.800202 | 1.609619e-48 | -8.615850e-47 |
| Msa0194510 | Msa1009000 | 0.801810 | 7.554344e-49 | -8.615850e-47 |
| Msa0194510 | Msa1018720 | 0.824151 | 9.427434e-54 | -8.615850e-47 |
| Msa0194510 | Msa1021770 | 0.806288 | 8.847303e-50 | -8.615850e-47 |
| Msa0194510 | Msa1029320 | 0.804016 | 2.644577e-49 | -8.615850e-47 |
| Msa0194510 | Msa1036390 | 0.818710 | 1.700989e-52 | -8.615850e-47 |
| Msa0194510 | Msa1044040 | 0.818108 | 2.327867e-52 | -8.615850e-47 |
| Msa0194510 | Msa1055260 | 0.805428 | 1.341293e-49 | -8.615850e-47 |
| Msa0194510 | Msa1055280 | 0.821192 | 4.602027e-53 | -8.615850e-47 |
| Msa0194510 | Msa1069300 | 0.807428 | 5.078831e-50 | -8.615850e-47 |
| Msa0194510 | Msa1072350 | 0.822009 | 2.979661e-53 | -8.615850e-47 |
| Msa0194510 | Msa1073840 | 0.801509 | 8.708703e-49 | -8.615850e-47 |
| Msa0194510 | Msa1076630 | 0.808205 | 3.473066e-50 | -8.615850e-47 |
| Msa0194510 | Msa1076680 | 0.825666 | 4.139607e-54 | -8.615850e-47 |
| Msa0194510 | Msa1081700 | 0.801685 | 8.012282e-49 | -8.615850e-47 |
| Msa0194510 | Msa1098560 | 0.802720 | 4.907426e-49 | -8.615850e-47 |
| Msa0194510 | Msa1107970 | 0.807318 | 5.360558e-50 | -8.615850e-47 |
| Msa0194510 | Msa1118140 | 0.809164 | 2.166482e-50 | -8.615850e-47 |
| Msa0194510 | Msa1122510 | 0.817216 | 3.700322e-52 | -8.615850e-47 |
| Msa0194510 | Msa1130650 | 0.807411 | 5.121156e-50 | -8.615850e-47 |
| Msa0194510 | Msa1149760 | 0.812841 | 3.461059e-51 | -8.615850e-47 |
| Msa0194510 | Msa1151960 | 0.810166 | 1.319680e-50 | -8.615850e-47 |
| Msa0194510 | Msa1184580 | 0.812680 | 3.753242e-51 | -8.615850e-47 |
| Msa0194510 | Msa1184730 | 0.812020 | 5.231546e-51 | -8.615850e-47 |
| Msa0194510 | Msa1186210 | 0.801257 | 9.804160e-49 | -8.615850e-47 |
| Msa0194510 | Msa1201990 | 0.831260 | 1.845889e-55 | -8.615850e-47 |
| Msa0194510 | Msa1214210 | 0.832880 | 7.344151e-56 | -8.615850e-47 |
| Msa0194510 | Msa1220230 | 0.805375 | 1.376400e-49 | -8.615850e-47 |
| Msa0194510 | Msa1221260 | 0.831563 | 1.555261e-55 | -8.615850e-47 |
| Msa0194510 | Msa1223460 | 0.801030 | 1.091102e-48 | -8.615850e-47 |
| Msa0194510 | Msa1226600 | 0.805415 | 1.349529e-49 | -8.615850e-47 |
| Msa0194510 | Msa1238480 | 0.835204 | 1.922869e-56 | -8.615850e-47 |
| Msa0194510 | Msa1238700 | 0.819941 | 8.915839e-53 | -8.615850e-47 |
| Msa0194510 | Msa1254770 | 0.801500 | 8.743723e-49 | -8.615850e-47 |
| Msa0194510 | Msa1280130 | 0.808980 | 2.372260e-50 | -8.615850e-47 |
| Msa0194510 | Msa1287160 | 0.803509 | 3.369123e-49 | -8.615850e-47 |
| Msa0194510 | Msa1287340 | 0.805889 | 1.073396e-49 | -8.615850e-47 |
| Msa0194510 | Msa1289340 | 0.808549 | 2.932771e-50 | -8.615850e-47 |
| Msa0194510 | Msa1295010 | 0.822127 | 2.797275e-53 | -8.615850e-47 |
| Msa0194510 | Msa1302150 | 0.826234 | 3.034036e-54 | -8.615850e-47 |
| Msa0194510 | Msa1326000 | 0.807751 | 4.337058e-50 | -8.615850e-47 |
| Msa0194510 | Msa1327820 | 0.817611 | 3.014452e-52 | -8.615850e-47 |
| Msa0194510 | Msa1329990 | 0.838638 | 2.554141e-57 | -8.615850e-47 |
| Msa0194510 | Msa1337340 | 0.817409 | 3.347831e-52 | -8.615850e-47 |
| Msa0194510 | Msa1343340 | 0.800471 | 1.419053e-48 | -8.615850e-47 |
| Msa0194510 | Msa1355260 | 0.820124 | 8.095470e-53 | -8.615850e-47 |
| Msa0194510 | Msa1365120 | 0.814349 | 1.611973e-51 | -8.615850e-47 |
| Msa0194510 | Msa1373950 | 0.814658 | 1.377067e-51 | -8.615850e-47 |
| Msa0194510 | Msa1379070 | 0.843828 | 1.102259e-58 | -8.615850e-47 |
| Msa0194510 | Msa1379090 | 0.842222 | 2.950360e-58 | -8.615850e-47 |
| Msa0194510 | Msa1386020 | 0.800756 | 1.241493e-48 | -8.615850e-47 |
| Msa0194510 | Msa1397540 | 0.849202 | 3.761733e-60 | -8.615850e-47 |
| Msa0194510 | Msa1418200 | 0.813493 | 2.489334e-51 | -8.615850e-47 |
| Msa0194510 | Msa1429830 | 0.809319 | 2.006435e-50 | -8.615850e-47 |
| Msa0194510 | Msa1435040 | 0.830494 | 2.845128e-55 | -8.615850e-47 |
| Msa0194510 | Msa1435670 | 0.818664 | 1.742302e-52 | -8.615850e-47 |
| Msa0194510 | Msa1439670 | 0.807575 | 4.728341e-50 | -8.615850e-47 |
| Msa0194510 | Msa1445790 | 0.811509 | 6.757885e-51 | -8.615850e-47 |
| Msa0194510 | Msa1448720 | 0.883782 | 3.350756e-71 | -8.615850e-47 |
| Msa0194510 | Msa1456810 | 0.812978 | 3.229612e-51 | -8.615850e-47 |
| Msa0194510 | Msa1464560 | 0.817173 | 3.783566e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194510 | MtrunA17_Chr2g0285381 | 82.639 | 144 | 7 | 1 | 19 | 144 | 322 | 465 | 4.38e-81 | 246 |
| Msa0194510 | MtrunA17_Chr3g0133011 | 51.744 | 172 | 54 | 2 | 2 | 144 | 325 | 496 | 1.96e-54 | 178 |
| Msa0194510 | MtrunA17_Chr2g0285351 | 58.333 | 144 | 42 | 1 | 19 | 144 | 326 | 469 | 1.61e-53 | 175 |
| Msa0194510 | MtrunA17_Chr2g0285371 | 59.722 | 144 | 40 | 1 | 19 | 144 | 326 | 469 | 1.69e-53 | 175 |
| Msa0194510 | MtrunA17_Chr4g0009641 | 54.545 | 143 | 46 | 2 | 20 | 144 | 305 | 446 | 2.86e-47 | 158 |
| Msa0194510 | MtrunA17_Chr4g0009661 | 51.748 | 143 | 50 | 2 | 20 | 144 | 329 | 470 | 1.03e-43 | 149 |
| Msa0194510 | MtrunA17_Chr4g0009721 | 50.685 | 146 | 49 | 3 | 19 | 144 | 277 | 419 | 1.68e-43 | 147 |
| Msa0194510 | MtrunA17_Chr4g0009701 | 51.799 | 139 | 48 | 2 | 24 | 144 | 333 | 470 | 2.53e-43 | 148 |
| Msa0194510 | MtrunA17_Chr4g0009651 | 51.049 | 143 | 51 | 2 | 20 | 144 | 329 | 470 | 1.58e-42 | 146 |
| Msa0194510 | MtrunA17_Chr4g0009681 | 51.079 | 139 | 49 | 2 | 24 | 144 | 330 | 467 | 2.65e-41 | 142 |
| Msa0194510 | MtrunA17_Chr4g0009671 | 49.640 | 139 | 51 | 2 | 24 | 144 | 298 | 435 | 1.02e-39 | 138 |
| Msa0194510 | MtrunA17_Chr4g0009711 | 46.528 | 144 | 58 | 2 | 19 | 144 | 328 | 470 | 2.33e-38 | 135 |
| Msa0194510 | MtrunA17_Chr2g0285401 | 75.000 | 68 | 17 | 0 | 55 | 122 | 19 | 86 | 1.32e-32 | 110 |
| Msa0194510 | MtrunA17_Chr7g0249431 | 34.320 | 169 | 78 | 3 | 8 | 144 | 331 | 498 | 1.88e-30 | 114 |
| Msa0194510 | MtrunA17_Chr8g0338461 | 35.366 | 164 | 74 | 4 | 12 | 144 | 333 | 495 | 3.97e-30 | 113 |
| Msa0194510 | MtrunA17_Chr3g0093971 | 38.194 | 144 | 67 | 1 | 19 | 140 | 307 | 450 | 3.78e-28 | 107 |
| Msa0194510 | MtrunA17_Chr7g0234051 | 35.714 | 140 | 71 | 3 | 24 | 144 | 356 | 495 | 6.79e-26 | 101 |
| Msa0194510 | MtrunA17_Chr7g0234041 | 41.905 | 105 | 50 | 1 | 28 | 121 | 340 | 444 | 3.77e-22 | 90.9 |
| Msa0194510 | MtrunA17_Chr2g0279381 | 38.235 | 102 | 57 | 1 | 19 | 120 | 116 | 211 | 9.20e-20 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194510 | AT2G23010.1 | 55.245 | 143 | 45 | 2 | 20 | 144 | 296 | 437 | 1.56e-45 | 154 |
| Msa0194510 | AT2G23010.2 | 53.521 | 142 | 49 | 1 | 20 | 144 | 296 | 437 | 1.59e-44 | 151 |
| Msa0194510 | AT2G22990.6 | 53.147 | 143 | 48 | 2 | 20 | 144 | 178 | 319 | 2.48e-44 | 148 |
| Msa0194510 | AT2G22960.1 | 53.237 | 139 | 46 | 2 | 24 | 144 | 47 | 184 | 2.48e-44 | 144 |
| Msa0194510 | AT5G36180.5 | 53.147 | 143 | 48 | 2 | 20 | 144 | 198 | 339 | 3.27e-44 | 148 |
| Msa0194510 | AT5G36180.3 | 53.147 | 143 | 48 | 2 | 20 | 144 | 198 | 339 | 3.27e-44 | 148 |
| Msa0194510 | AT5G36180.1 | 53.147 | 143 | 48 | 2 | 20 | 144 | 300 | 441 | 2.08e-43 | 148 |
| Msa0194510 | AT2G22990.2 | 51.408 | 142 | 52 | 1 | 20 | 144 | 178 | 319 | 2.17e-43 | 145 |
| Msa0194510 | AT1G73300.1 | 52.448 | 143 | 49 | 2 | 20 | 144 | 300 | 441 | 2.26e-43 | 148 |
| Msa0194510 | AT1G73300.2 | 52.448 | 143 | 49 | 2 | 20 | 144 | 300 | 441 | 2.26e-43 | 148 |
| Msa0194510 | AT2G22990.1 | 53.147 | 143 | 48 | 2 | 20 | 144 | 292 | 433 | 2.31e-43 | 148 |
| Msa0194510 | AT1G73280.3 | 51.748 | 143 | 50 | 2 | 20 | 144 | 173 | 314 | 4.37e-43 | 144 |
| Msa0194510 | AT1G73280.4 | 51.748 | 143 | 50 | 2 | 20 | 144 | 198 | 339 | 6.02e-43 | 145 |
| Msa0194510 | AT1G73310.1 | 50.000 | 152 | 57 | 2 | 11 | 144 | 291 | 441 | 1.29e-42 | 146 |
| Msa0194510 | AT2G22920.3 | 50.345 | 145 | 51 | 3 | 20 | 144 | 113 | 256 | 1.65e-42 | 141 |
| Msa0194510 | AT2G22990.5 | 51.408 | 142 | 52 | 1 | 20 | 144 | 283 | 424 | 2.12e-42 | 145 |
| Msa0194510 | AT1G73280.1 | 51.748 | 143 | 50 | 2 | 20 | 144 | 300 | 441 | 4.14e-42 | 145 |
| Msa0194510 | AT3G10450.2 | 49.650 | 143 | 53 | 2 | 20 | 144 | 253 | 394 | 3.23e-41 | 141 |
| Msa0194510 | AT3G10450.1 | 49.650 | 143 | 53 | 2 | 20 | 144 | 296 | 437 | 7.58e-41 | 141 |
| Msa0194510 | AT2G23000.1 | 53.147 | 143 | 48 | 2 | 20 | 144 | 296 | 437 | 7.74e-41 | 141 |
| Msa0194510 | AT2G23000.2 | 53.147 | 143 | 48 | 2 | 20 | 144 | 296 | 437 | 7.74e-41 | 141 |
| Msa0194510 | AT2G22920.2 | 50.345 | 145 | 51 | 3 | 20 | 144 | 292 | 435 | 8.77e-41 | 141 |
| Msa0194510 | AT1G73290.1 | 50.350 | 143 | 52 | 2 | 20 | 144 | 297 | 438 | 1.00e-40 | 141 |
| Msa0194510 | AT3G12203.2 | 49.640 | 139 | 51 | 2 | 24 | 144 | 242 | 379 | 3.13e-40 | 139 |
| Msa0194510 | AT3G12203.3 | 49.640 | 139 | 51 | 2 | 24 | 144 | 279 | 416 | 6.21e-40 | 139 |
| Msa0194510 | AT3G12203.1 | 49.640 | 139 | 51 | 2 | 24 | 144 | 300 | 437 | 7.54e-40 | 139 |
| Msa0194510 | AT1G33540.2 | 50.694 | 144 | 51 | 3 | 20 | 144 | 279 | 421 | 3.16e-39 | 137 |
| Msa0194510 | AT1G33540.1 | 50.694 | 144 | 51 | 3 | 20 | 144 | 322 | 464 | 7.36e-39 | 136 |
| Msa0194510 | AT2G22970.1 | 49.306 | 144 | 53 | 3 | 20 | 144 | 291 | 433 | 1.13e-38 | 135 |
| Msa0194510 | AT5G36180.2 | 60.194 | 103 | 41 | 0 | 20 | 122 | 198 | 300 | 1.13e-38 | 133 |
| Msa0194510 | AT5G36180.4 | 57.407 | 108 | 46 | 0 | 20 | 127 | 198 | 305 | 2.69e-38 | 132 |
| Msa0194510 | AT5G09640.1 | 49.655 | 145 | 51 | 4 | 20 | 144 | 323 | 465 | 3.70e-38 | 135 |
| Msa0194510 | AT2G22980.1 | 50.000 | 140 | 50 | 3 | 24 | 144 | 292 | 430 | 3.06e-37 | 132 |
| Msa0194510 | AT1G73310.3 | 55.856 | 111 | 49 | 0 | 11 | 121 | 189 | 299 | 5.85e-37 | 129 |
| Msa0194510 | AT3G12240.1 | 47.222 | 144 | 57 | 2 | 19 | 144 | 294 | 436 | 1.23e-36 | 130 |
| Msa0194510 | AT1G73270.2 | 48.921 | 139 | 52 | 2 | 24 | 144 | 304 | 441 | 1.92e-36 | 130 |
| Msa0194510 | AT1G73270.1 | 48.921 | 139 | 52 | 2 | 24 | 144 | 304 | 441 | 2.00e-36 | 130 |
| Msa0194510 | AT2G22990.4 | 53.600 | 125 | 55 | 2 | 20 | 142 | 292 | 415 | 3.18e-36 | 129 |
| Msa0194510 | AT1G73310.2 | 55.856 | 111 | 49 | 0 | 11 | 121 | 291 | 401 | 3.71e-36 | 129 |
| Msa0194510 | AT2G22990.3 | 52.846 | 123 | 57 | 1 | 20 | 142 | 292 | 413 | 4.11e-36 | 129 |
| Msa0194510 | AT3G12230.1 | 48.611 | 144 | 55 | 2 | 19 | 144 | 293 | 435 | 5.26e-36 | 128 |
| Msa0194510 | AT2G22920.1 | 56.731 | 104 | 43 | 1 | 20 | 121 | 292 | 395 | 8.89e-36 | 127 |
| Msa0194510 | AT1G73290.3 | 56.863 | 102 | 44 | 0 | 20 | 121 | 297 | 398 | 3.30e-35 | 126 |
| Msa0194510 | AT3G10450.3 | 54.369 | 103 | 47 | 0 | 20 | 122 | 253 | 355 | 1.64e-34 | 123 |
| Msa0194510 | AT3G10450.4 | 54.369 | 103 | 47 | 0 | 20 | 122 | 296 | 398 | 3.30e-34 | 123 |
| Msa0194510 | AT2G22970.4 | 56.731 | 104 | 44 | 1 | 20 | 122 | 291 | 394 | 5.13e-34 | 123 |
| Msa0194510 | AT2G22970.3 | 56.731 | 104 | 44 | 1 | 20 | 122 | 291 | 394 | 6.55e-34 | 123 |
| Msa0194510 | AT2G22980.5 | 54.808 | 104 | 46 | 1 | 20 | 122 | 171 | 274 | 2.71e-32 | 116 |
| Msa0194510 | AT3G12220.3 | 43.537 | 147 | 64 | 2 | 16 | 144 | 238 | 383 | 3.07e-32 | 117 |
| Msa0194510 | AT3G12220.2 | 43.750 | 144 | 62 | 2 | 19 | 144 | 263 | 405 | 7.63e-32 | 117 |
| Msa0194510 | AT3G12220.1 | 43.750 | 144 | 62 | 2 | 19 | 144 | 293 | 435 | 1.21e-31 | 117 |
| Msa0194510 | AT2G22980.2 | 56.000 | 100 | 43 | 1 | 24 | 122 | 292 | 391 | 2.23e-31 | 115 |
| Msa0194510 | AT2G22980.4 | 56.000 | 100 | 43 | 1 | 24 | 122 | 292 | 391 | 3.05e-31 | 115 |
| Msa0194510 | AT4G12910.1 | 34.356 | 163 | 76 | 4 | 8 | 139 | 330 | 492 | 7.96e-28 | 107 |
| Msa0194510 | AT3G25420.1 | 35.606 | 132 | 66 | 2 | 28 | 140 | 359 | 490 | 2.74e-26 | 103 |
| Msa0194510 | AT4G12910.2 | 35.714 | 126 | 68 | 2 | 8 | 120 | 330 | 455 | 3.55e-23 | 94.4 |
| Msa0194510 | AT1G73280.2 | 59.322 | 59 | 24 | 0 | 23 | 81 | 303 | 361 | 4.54e-15 | 71.2 |
| Msa0194510 | AT2G22980.3 | 54.237 | 59 | 26 | 1 | 24 | 81 | 294 | 352 | 2.03e-11 | 60.8 |
| Msa0194510 | AT2G05850.1 | 32.727 | 110 | 49 | 2 | 28 | 122 | 344 | 443 | 4.73e-11 | 59.7 |
| Msa0194510 | AT5G23210.5 | 28.049 | 164 | 94 | 5 | 5 | 144 | 236 | 399 | 9.94e-11 | 58.9 |
Find 36 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATTACTTAGTGATTAT+TGG | 0.137789 | 2_1:+10716436 | Msa0194510:CDS |
| TGACATTTCTATTCCATTCT+TGG | 0.177100 | 2_1:+10716905 | Msa0194510:CDS |
| TTCTGATAAAATACCTTATA+CGG | 0.269525 | 2_1:+10716605 | Msa0194510:CDS |
| ACAATTACTTAGTGATTATT+GGG | 0.304493 | 2_1:+10716437 | Msa0194510:CDS |
| ACTACTCCATTGTTGATGAT+TGG | 0.342996 | 2_1:+10716955 | Msa0194510:CDS |
| TGCAGGGAACTATTGGAAAA+TGG | 0.362864 | 2_1:+10716574 | Msa0194510:intron |
| TTAGAGATATCTCCCGTATA+AGG | 0.370677 | 2_1:-10716618 | None:intergenic |
| CATGTAAATCTCAGTGATAA+AGG | 0.422636 | 2_1:+10716654 | Msa0194510:CDS |
| CATGTGTTGCAGGGAACTAT+TGG | 0.422923 | 2_1:+10716567 | Msa0194510:intron |
| GATATCTAAGAGGCCTTTGT+AGG | 0.428982 | 2_1:+10717572 | Msa0194510:CDS |
| TTCGCGAACAGTGCTATTGT+TGG | 0.450789 | 2_1:-10716460 | None:intergenic |
| ATCATGGCAAGACATTCTTC+AGG | 0.466282 | 2_1:-10717540 | None:intergenic |
| GTCTTGCCATGATTAGTAGA+TGG | 0.467692 | 2_1:+10717550 | Msa0194510:CDS |
| AGATATCCATCTACTAATCA+TGG | 0.472745 | 2_1:-10717556 | None:intergenic |
| CAATAATCACTAAGTAATTG+TGG | 0.477111 | 2_1:-10716435 | None:intergenic |
| GACACACAGCTGCCGAGTAC+CGG | 0.492510 | 2_1:+10717517 | Msa0194510:CDS |
| ACTCCATTGTTGATGATTGG+AGG | 0.510049 | 2_1:+10716958 | Msa0194510:CDS |
| AATAATCACTAAGTAATTGT+GGG | 0.522377 | 2_1:-10716434 | None:intergenic |
| GCTACCGTTCACTAATCTAC+AGG | 0.535329 | 2_1:+10716676 | Msa0194510:CDS |
| ACATACCTTGCGTATGTGTA+GGG | 0.537590 | 2_1:-10716484 | None:intergenic |
| TGATCAAATTTACAGGGTGG+AGG | 0.552936 | 2_1:+10717495 | Msa0194510:intron |
| AACCCTCAATGTCGAATGAA+AGG | 0.553128 | 2_1:+10716163 | None:intergenic |
| TCTGATAAAATACCTTATAC+GGG | 0.558066 | 2_1:+10716606 | Msa0194510:CDS |
| ACATTCTTCAGGCCGGTACT+CGG | 0.562500 | 2_1:-10717529 | None:intergenic |
| TACATACCTTGCGTATGTGT+AGG | 0.573629 | 2_1:-10716485 | None:intergenic |
| TTGTTGATGATTGGAGGCAG+TGG | 0.574543 | 2_1:+10716964 | Msa0194510:CDS |
| TTAGTAGATGGATATCTAAG+AGG | 0.578752 | 2_1:+10717562 | Msa0194510:CDS |
| CATTCTTGGATACAAAAGCA+TGG | 0.590619 | 2_1:+10716919 | Msa0194510:CDS |
| TGGCAAGACATTCTTCAGGC+CGG | 0.619227 | 2_1:-10717536 | None:intergenic |
| TGGAGGCAGTGGCATACAGA+GGG | 0.634579 | 2_1:+10716975 | Msa0194510:CDS |
| CTGCCTCCAATCATCAACAA+TGG | 0.635469 | 2_1:-10716961 | None:intergenic |
| TTGACCTGTAGATTAGTGAA+CGG | 0.637534 | 2_1:-10716680 | None:intergenic |
| AAAGGAAGGTAATCTCATGA+CGG | 0.662772 | 2_1:+10716203 | Msa0194510:CDS |
| TTGGAGGCAGTGGCATACAG+AGG | 0.686415 | 2_1:+10716974 | Msa0194510:CDS |
| CGAAGCCCTACACATACGCA+AGG | 0.686482 | 2_1:+10716479 | Msa0194510:CDS |
| AAATTGAGGGGAGAAAAGGA+AGG | 0.693386 | 2_1:+10716189 | Msa0194510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATATATTGTTAACAG+TGG | + | chr2_1:10716876-10716895 | Msa0194510:intron | 15.0% |
| !! | ATATCTTATAAATAGTTGAA+GGG | - | chr2_1:10717161-10717180 | None:intergenic | 15.0% |
| !! | TATATCTTATAAATAGTTGA+AGG | - | chr2_1:10717162-10717181 | None:intergenic | 15.0% |
| !!! | TGCATATTGTTAAATTTTTA+GGG | - | chr2_1:10717465-10717484 | None:intergenic | 15.0% |
| !!! | TTGCATATTGTTAAATTTTT+AGG | - | chr2_1:10717466-10717485 | None:intergenic | 15.0% |
| !!! | ATTTAACAATATGCAATTTT+TGG | + | chr2_1:10717470-10717489 | Msa0194510:intron | 15.0% |
| !!! | ATTTTATATATTGTTAACAG+TGG | + | chr2_1:10716876-10716895 | Msa0194510:intron | 15.0% |
| !! | ATATCTTATAAATAGTTGAA+GGG | - | chr2_1:10717161-10717180 | None:intergenic | 15.0% |
| !! | TATATCTTATAAATAGTTGA+AGG | - | chr2_1:10717162-10717181 | None:intergenic | 15.0% |
| !!! | TGCATATTGTTAAATTTTTA+GGG | - | chr2_1:10717465-10717484 | None:intergenic | 15.0% |
| !!! | TTGCATATTGTTAAATTTTT+AGG | - | chr2_1:10717466-10717485 | None:intergenic | 15.0% |
| !!! | ATTTAACAATATGCAATTTT+TGG | + | chr2_1:10717470-10717489 | Msa0194510:intron | 15.0% |
| !! | TGATCGTTTGATTAAAATTA+AGG | - | chr2_1:10716282-10716301 | None:intergenic | 20.0% |
| !!! | TATTTTGTATTTTTCACGAT+AGG | + | chr2_1:10716309-10716328 | Msa0194510:intron | 20.0% |
| !! | AGGTTATATATATAGATTAG+GGG | - | chr2_1:10716366-10716385 | None:intergenic | 20.0% |
| !! | GAGGTTATATATATAGATTA+GGG | - | chr2_1:10716367-10716386 | None:intergenic | 20.0% |
| !! | AATAATCACTAAGTAATTGT+GGG | - | chr2_1:10716437-10716456 | None:intergenic | 20.0% |
| !! | ACAATTACTTAGTGATTATT+GGG | + | chr2_1:10716437-10716456 | Msa0194510:CDS | 20.0% |
| !! | TTCTGATAAAATACCTTATA+CGG | + | chr2_1:10716605-10716624 | Msa0194510:CDS | 20.0% |
| !!! | TTCTTTTTTCTTTTCTGAAA+TGG | + | chr2_1:10717078-10717097 | Msa0194510:intron | 20.0% |
| !! | TGATCGTTTGATTAAAATTA+AGG | - | chr2_1:10716282-10716301 | None:intergenic | 20.0% |
| !!! | TATTTTGTATTTTTCACGAT+AGG | + | chr2_1:10716309-10716328 | Msa0194510:intron | 20.0% |
| !! | AGGTTATATATATAGATTAG+GGG | - | chr2_1:10716366-10716385 | None:intergenic | 20.0% |
| !! | GAGGTTATATATATAGATTA+GGG | - | chr2_1:10716367-10716386 | None:intergenic | 20.0% |
| !! | AATAATCACTAAGTAATTGT+GGG | - | chr2_1:10716437-10716456 | None:intergenic | 20.0% |
| !! | ACAATTACTTAGTGATTATT+GGG | + | chr2_1:10716437-10716456 | Msa0194510:CDS | 20.0% |
| !! | TTCTGATAAAATACCTTATA+CGG | + | chr2_1:10716605-10716624 | Msa0194510:CDS | 20.0% |
| !!! | TTCTTTTTTCTTTTCTGAAA+TGG | + | chr2_1:10717078-10717097 | Msa0194510:intron | 20.0% |
| ! | GAATGAAAGGAAAAAATTGA+GGG | + | chr2_1:10716176-10716195 | Msa0194510:CDS | 25.0% |
| ! | AATGAAAGGAAAAAATTGAG+GGG | + | chr2_1:10716177-10716196 | Msa0194510:CDS | 25.0% |
| ! | CGAGGTTATATATATAGATT+AGG | - | chr2_1:10716368-10716387 | None:intergenic | 25.0% |
| ! | CAATAATCACTAAGTAATTG+TGG | - | chr2_1:10716438-10716457 | None:intergenic | 25.0% |
| ! | CACAATTACTTAGTGATTAT+TGG | + | chr2_1:10716436-10716455 | Msa0194510:CDS | 25.0% |
| ! | GTGTCTATATATGTATGTAT+GGG | - | chr2_1:10716520-10716539 | None:intergenic | 25.0% |
| ! | TGTGTCTATATATGTATGTA+TGG | - | chr2_1:10716521-10716540 | None:intergenic | 25.0% |
| ! | TCTGATAAAATACCTTATAC+GGG | + | chr2_1:10716606-10716625 | Msa0194510:CDS | 25.0% |
| ! | CTATGTTCATAAATTGCATA+TGG | + | chr2_1:10716713-10716732 | Msa0194510:intron | 25.0% |
| ! | TCAACAAACGTTAATGTATT+TGG | + | chr2_1:10717196-10717215 | Msa0194510:intron | 25.0% |
| ! | GAATGAAAGGAAAAAATTGA+GGG | + | chr2_1:10716176-10716195 | Msa0194510:CDS | 25.0% |
| ! | AATGAAAGGAAAAAATTGAG+GGG | + | chr2_1:10716177-10716196 | Msa0194510:CDS | 25.0% |
| ! | CGAGGTTATATATATAGATT+AGG | - | chr2_1:10716368-10716387 | None:intergenic | 25.0% |
| ! | CAATAATCACTAAGTAATTG+TGG | - | chr2_1:10716438-10716457 | None:intergenic | 25.0% |
| ! | CACAATTACTTAGTGATTAT+TGG | + | chr2_1:10716436-10716455 | Msa0194510:CDS | 25.0% |
| ! | GTGTCTATATATGTATGTAT+GGG | - | chr2_1:10716520-10716539 | None:intergenic | 25.0% |
| ! | TGTGTCTATATATGTATGTA+TGG | - | chr2_1:10716521-10716540 | None:intergenic | 25.0% |
| ! | TCTGATAAAATACCTTATAC+GGG | + | chr2_1:10716606-10716625 | Msa0194510:CDS | 25.0% |
| ! | CTATGTTCATAAATTGCATA+TGG | + | chr2_1:10716713-10716732 | Msa0194510:intron | 25.0% |
| ! | TCAACAAACGTTAATGTATT+TGG | + | chr2_1:10717196-10717215 | Msa0194510:intron | 25.0% |
| CGAATGAAAGGAAAAAATTG+AGG | + | chr2_1:10716175-10716194 | Msa0194510:CDS | 30.0% | |
| CAAGTTAACAAAATGTTTCG+AGG | - | chr2_1:10716386-10716405 | None:intergenic | 30.0% | |
| TAACTTGATGTTTGTTTCCT+CGG | + | chr2_1:10716399-10716418 | Msa0194510:intron | 30.0% | |
| CATGTAAATCTCAGTGATAA+AGG | + | chr2_1:10716654-10716673 | Msa0194510:CDS | 30.0% | |
| TGACATTTCTATTCCATTCT+TGG | + | chr2_1:10716905-10716924 | Msa0194510:CDS | 30.0% | |
| AATTATAGTTGTAGCAGTTG+AGG | - | chr2_1:10717385-10717404 | None:intergenic | 30.0% | |
| !! | TTTGGCTTGATCAAATTTAC+AGG | + | chr2_1:10717488-10717507 | Msa0194510:intron | 30.0% |
| ! | TTGGCTTGATCAAATTTACA+GGG | + | chr2_1:10717489-10717508 | Msa0194510:intron | 30.0% |
| AGATATCCATCTACTAATCA+TGG | - | chr2_1:10717559-10717578 | None:intergenic | 30.0% | |
| TTAGTAGATGGATATCTAAG+AGG | + | chr2_1:10717562-10717581 | Msa0194510:CDS | 30.0% | |
| CGAATGAAAGGAAAAAATTG+AGG | + | chr2_1:10716175-10716194 | Msa0194510:CDS | 30.0% | |
| CAAGTTAACAAAATGTTTCG+AGG | - | chr2_1:10716386-10716405 | None:intergenic | 30.0% | |
| TAACTTGATGTTTGTTTCCT+CGG | + | chr2_1:10716399-10716418 | Msa0194510:intron | 30.0% | |
| CATGTAAATCTCAGTGATAA+AGG | + | chr2_1:10716654-10716673 | Msa0194510:CDS | 30.0% | |
| TGACATTTCTATTCCATTCT+TGG | + | chr2_1:10716905-10716924 | Msa0194510:CDS | 30.0% | |
| AATTATAGTTGTAGCAGTTG+AGG | - | chr2_1:10717385-10717404 | None:intergenic | 30.0% | |
| !! | TTTGGCTTGATCAAATTTAC+AGG | + | chr2_1:10717488-10717507 | Msa0194510:intron | 30.0% |
| ! | TTGGCTTGATCAAATTTACA+GGG | + | chr2_1:10717489-10717508 | Msa0194510:intron | 30.0% |
| AGATATCCATCTACTAATCA+TGG | - | chr2_1:10717559-10717578 | None:intergenic | 30.0% | |
| TTAGTAGATGGATATCTAAG+AGG | + | chr2_1:10717562-10717581 | Msa0194510:CDS | 30.0% | |
| GAAAAAATTGAGGGGAGAAA+AGG | + | chr2_1:10716185-10716204 | Msa0194510:CDS | 35.0% | |
| AAAGGAAGGTAATCTCATGA+CGG | + | chr2_1:10716203-10716222 | Msa0194510:CDS | 35.0% | |
| TTAGAGATATCTCCCGTATA+AGG | - | chr2_1:10716621-10716640 | None:intergenic | 35.0% | |
| TTGACCTGTAGATTAGTGAA+CGG | - | chr2_1:10716683-10716702 | None:intergenic | 35.0% | |
| ! | CATGCTTTTGTATCCAAGAA+TGG | - | chr2_1:10716921-10716940 | None:intergenic | 35.0% |
| CATTCTTGGATACAAAAGCA+TGG | + | chr2_1:10716919-10716938 | Msa0194510:CDS | 35.0% | |
| !! | ACTACTCCATTGTTGATGAT+TGG | + | chr2_1:10716955-10716974 | Msa0194510:CDS | 35.0% |
| TGTGCAAGTATAGATACACA+AGG | + | chr2_1:10717309-10717328 | Msa0194510:intron | 35.0% | |
| !! | ATTTTTAGGGAAACTCAGTG+TGG | - | chr2_1:10717452-10717471 | None:intergenic | 35.0% |
| GAAAAAATTGAGGGGAGAAA+AGG | + | chr2_1:10716185-10716204 | Msa0194510:CDS | 35.0% | |
| AAAGGAAGGTAATCTCATGA+CGG | + | chr2_1:10716203-10716222 | Msa0194510:CDS | 35.0% | |
| TTAGAGATATCTCCCGTATA+AGG | - | chr2_1:10716621-10716640 | None:intergenic | 35.0% | |
| TTGACCTGTAGATTAGTGAA+CGG | - | chr2_1:10716683-10716702 | None:intergenic | 35.0% | |
| ! | CATGCTTTTGTATCCAAGAA+TGG | - | chr2_1:10716921-10716940 | None:intergenic | 35.0% |
| CATTCTTGGATACAAAAGCA+TGG | + | chr2_1:10716919-10716938 | Msa0194510:CDS | 35.0% | |
| !! | ACTACTCCATTGTTGATGAT+TGG | + | chr2_1:10716955-10716974 | Msa0194510:CDS | 35.0% |
| TGTGCAAGTATAGATACACA+AGG | + | chr2_1:10717309-10717328 | Msa0194510:intron | 35.0% | |
| !! | ATTTTTAGGGAAACTCAGTG+TGG | - | chr2_1:10717452-10717471 | None:intergenic | 35.0% |
| AAATTGAGGGGAGAAAAGGA+AGG | + | chr2_1:10716189-10716208 | Msa0194510:CDS | 40.0% | |
| ACATACCTTGCGTATGTGTA+GGG | - | chr2_1:10716487-10716506 | None:intergenic | 40.0% | |
| TACATACCTTGCGTATGTGT+AGG | - | chr2_1:10716488-10716507 | None:intergenic | 40.0% | |
| CACACACGATAATACTCGTT+TGG | + | chr2_1:10716541-10716560 | Msa0194510:intron | 40.0% | |
| TGCAGGGAACTATTGGAAAA+TGG | + | chr2_1:10716574-10716593 | Msa0194510:intron | 40.0% | |
| !! | ACTCCATTGTTGATGATTGG+AGG | + | chr2_1:10716958-10716977 | Msa0194510:CDS | 40.0% |
| TATGTGAATACCCTGCAACT+TGG | - | chr2_1:10717001-10717020 | None:intergenic | 40.0% | |
| TACACAAGGACATACTCGAA+TGG | + | chr2_1:10717323-10717342 | Msa0194510:intron | 40.0% | |
| ACACAAGGACATACTCGAAT+GGG | + | chr2_1:10717324-10717343 | Msa0194510:intron | 40.0% | |
| GATGACATTTGCAACTGTGA+AGG | + | chr2_1:10717346-10717365 | Msa0194510:intron | 40.0% | |
| GCTTGATCAAATTTACAGGG+TGG | + | chr2_1:10717492-10717511 | Msa0194510:intron | 40.0% | |
| TGATCAAATTTACAGGGTGG+AGG | + | chr2_1:10717495-10717514 | Msa0194510:intron | 40.0% | |
| ATCATGGCAAGACATTCTTC+AGG | - | chr2_1:10717543-10717562 | None:intergenic | 40.0% | |
| GTCTTGCCATGATTAGTAGA+TGG | + | chr2_1:10717550-10717569 | Msa0194510:CDS | 40.0% | |
| AAATTGAGGGGAGAAAAGGA+AGG | + | chr2_1:10716189-10716208 | Msa0194510:CDS | 40.0% | |
| ACATACCTTGCGTATGTGTA+GGG | - | chr2_1:10716487-10716506 | None:intergenic | 40.0% | |
| TACATACCTTGCGTATGTGT+AGG | - | chr2_1:10716488-10716507 | None:intergenic | 40.0% | |
| CACACACGATAATACTCGTT+TGG | + | chr2_1:10716541-10716560 | Msa0194510:intron | 40.0% | |
| TGCAGGGAACTATTGGAAAA+TGG | + | chr2_1:10716574-10716593 | Msa0194510:intron | 40.0% | |
| !! | ACTCCATTGTTGATGATTGG+AGG | + | chr2_1:10716958-10716977 | Msa0194510:CDS | 40.0% |
| TATGTGAATACCCTGCAACT+TGG | - | chr2_1:10717001-10717020 | None:intergenic | 40.0% | |
| TACACAAGGACATACTCGAA+TGG | + | chr2_1:10717323-10717342 | Msa0194510:intron | 40.0% | |
| ACACAAGGACATACTCGAAT+GGG | + | chr2_1:10717324-10717343 | Msa0194510:intron | 40.0% | |
| GATGACATTTGCAACTGTGA+AGG | + | chr2_1:10717346-10717365 | Msa0194510:intron | 40.0% | |
| GCTTGATCAAATTTACAGGG+TGG | + | chr2_1:10717492-10717511 | Msa0194510:intron | 40.0% | |
| TGATCAAATTTACAGGGTGG+AGG | + | chr2_1:10717495-10717514 | Msa0194510:intron | 40.0% | |
| ATCATGGCAAGACATTCTTC+AGG | - | chr2_1:10717543-10717562 | None:intergenic | 40.0% | |
| GTCTTGCCATGATTAGTAGA+TGG | + | chr2_1:10717550-10717569 | Msa0194510:CDS | 40.0% | |
| GTGGGTAATTCTAACATCCG+AGG | - | chr2_1:10716419-10716438 | None:intergenic | 45.0% | |
| ! | TTCGCGAACAGTGCTATTGT+TGG | - | chr2_1:10716463-10716482 | None:intergenic | 45.0% |
| GTTTGGTTGCATGTGTTGCA+GGG | + | chr2_1:10716558-10716577 | Msa0194510:intron | 45.0% | |
| CATGTGTTGCAGGGAACTAT+TGG | + | chr2_1:10716567-10716586 | Msa0194510:intron | 45.0% | |
| GCTACCGTTCACTAATCTAC+AGG | + | chr2_1:10716676-10716695 | Msa0194510:CDS | 45.0% | |
| CTGCCTCCAATCATCAACAA+TGG | - | chr2_1:10716964-10716983 | None:intergenic | 45.0% | |
| !! | TTGTTGATGATTGGAGGCAG+TGG | + | chr2_1:10716964-10716983 | Msa0194510:CDS | 45.0% |
| GTGGGTAATTCTAACATCCG+AGG | - | chr2_1:10716419-10716438 | None:intergenic | 45.0% | |
| ! | TTCGCGAACAGTGCTATTGT+TGG | - | chr2_1:10716463-10716482 | None:intergenic | 45.0% |
| GTTTGGTTGCATGTGTTGCA+GGG | + | chr2_1:10716558-10716577 | Msa0194510:intron | 45.0% | |
| CATGTGTTGCAGGGAACTAT+TGG | + | chr2_1:10716567-10716586 | Msa0194510:intron | 45.0% | |
| GCTACCGTTCACTAATCTAC+AGG | + | chr2_1:10716676-10716695 | Msa0194510:CDS | 45.0% | |
| CTGCCTCCAATCATCAACAA+TGG | - | chr2_1:10716964-10716983 | None:intergenic | 45.0% | |
| !! | TTGTTGATGATTGGAGGCAG+TGG | + | chr2_1:10716964-10716983 | Msa0194510:CDS | 45.0% |
| CGTTTGGTTGCATGTGTTGC+AGG | + | chr2_1:10716557-10716576 | Msa0194510:intron | 50.0% | |
| ATACAGAGGGCCAAGTTGCA+GGG | + | chr2_1:10716988-10717007 | Msa0194510:intron | 50.0% | |
| ACATTCTTCAGGCCGGTACT+CGG | - | chr2_1:10717532-10717551 | None:intergenic | 50.0% | |
| TGGCAAGACATTCTTCAGGC+CGG | - | chr2_1:10717539-10717558 | None:intergenic | 50.0% | |
| CGTTTGGTTGCATGTGTTGC+AGG | + | chr2_1:10716557-10716576 | Msa0194510:intron | 50.0% | |
| ATACAGAGGGCCAAGTTGCA+GGG | + | chr2_1:10716988-10717007 | Msa0194510:intron | 50.0% | |
| ACATTCTTCAGGCCGGTACT+CGG | - | chr2_1:10717532-10717551 | None:intergenic | 50.0% | |
| TGGCAAGACATTCTTCAGGC+CGG | - | chr2_1:10717539-10717558 | None:intergenic | 50.0% | |
| CGAAGCCCTACACATACGCA+AGG | + | chr2_1:10716479-10716498 | Msa0194510:CDS | 55.0% | |
| TTGGAGGCAGTGGCATACAG+AGG | + | chr2_1:10716974-10716993 | Msa0194510:CDS | 55.0% | |
| TGGAGGCAGTGGCATACAGA+GGG | + | chr2_1:10716975-10716994 | Msa0194510:CDS | 55.0% | |
| CATACAGAGGGCCAAGTTGC+AGG | + | chr2_1:10716987-10717006 | Msa0194510:intron | 55.0% | |
| CGAAGCCCTACACATACGCA+AGG | + | chr2_1:10716479-10716498 | Msa0194510:CDS | 55.0% | |
| TTGGAGGCAGTGGCATACAG+AGG | + | chr2_1:10716974-10716993 | Msa0194510:CDS | 55.0% | |
| TGGAGGCAGTGGCATACAGA+GGG | + | chr2_1:10716975-10716994 | Msa0194510:CDS | 55.0% | |
| CATACAGAGGGCCAAGTTGC+AGG | + | chr2_1:10716987-10717006 | Msa0194510:intron | 55.0% | |
| GACACACAGCTGCCGAGTAC+CGG | + | chr2_1:10717517-10717536 | Msa0194510:CDS | 60.0% | |
| GACACACAGCTGCCGAGTAC+CGG | + | chr2_1:10717517-10717536 | Msa0194510:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 10716171 | 10717593 | 10716171 | ID=Msa0194510;Name=Msa0194510 |
| chr2_1 | mRNA | 10716171 | 10717593 | 10716171 | ID=Msa0194510-mRNA-1;Parent=Msa0194510;Name=Msa0194510-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.25|0|0.8|1|1|5|0|144 |
| chr2_1 | exon | 10716171 | 10716224 | 10716171 | ID=Msa0194510-mRNA-1:exon:4819;Parent=Msa0194510-mRNA-1 |
| chr2_1 | exon | 10716429 | 10716500 | 10716429 | ID=Msa0194510-mRNA-1:exon:4820;Parent=Msa0194510-mRNA-1 |
| chr2_1 | exon | 10716579 | 10716697 | 10716579 | ID=Msa0194510-mRNA-1:exon:4821;Parent=Msa0194510-mRNA-1 |
| chr2_1 | exon | 10716896 | 10717001 | 10716896 | ID=Msa0194510-mRNA-1:exon:4822;Parent=Msa0194510-mRNA-1 |
| chr2_1 | exon | 10717510 | 10717593 | 10717510 | ID=Msa0194510-mRNA-1:exon:4823;Parent=Msa0194510-mRNA-1 |
| chr2_1 | CDS | 10716171 | 10716224 | 10716171 | ID=Msa0194510-mRNA-1:cds;Parent=Msa0194510-mRNA-1 |
| chr2_1 | CDS | 10716429 | 10716500 | 10716429 | ID=Msa0194510-mRNA-1:cds;Parent=Msa0194510-mRNA-1 |
| chr2_1 | CDS | 10716579 | 10716697 | 10716579 | ID=Msa0194510-mRNA-1:cds;Parent=Msa0194510-mRNA-1 |
| chr2_1 | CDS | 10716896 | 10717001 | 10716896 | ID=Msa0194510-mRNA-1:cds;Parent=Msa0194510-mRNA-1 |
| chr2_1 | CDS | 10717510 | 10717593 | 10717510 | ID=Msa0194510-mRNA-1:cds;Parent=Msa0194510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
