Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247550 | XP_013463686.1 | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.89e-96 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247550 | A0A072V7V5 | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 2.33e-96 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0247550 | 0.804618 | 1.981159e-49 | -8.615850e-47 |
| Msa0011960 | Msa0247550 | 0.825701 | 4.059877e-54 | -8.615850e-47 |
| Msa0020410 | Msa0247550 | 0.803945 | 2.736134e-49 | -8.615850e-47 |
| Msa0025730 | Msa0247550 | 0.813419 | 2.584282e-51 | -8.615850e-47 |
| Msa0027260 | Msa0247550 | 0.819809 | 9.555229e-53 | -8.615850e-47 |
| Msa0027770 | Msa0247550 | 0.801534 | 8.606426e-49 | -8.615850e-47 |
| Msa0028660 | Msa0247550 | 0.804990 | 1.656611e-49 | -8.615850e-47 |
| Msa0032580 | Msa0247550 | 0.830743 | 2.473267e-55 | -8.615850e-47 |
| Msa0043660 | Msa0247550 | 0.812844 | 3.455474e-51 | -8.615850e-47 |
| Msa0054440 | Msa0247550 | 0.811618 | 6.399446e-51 | -8.615850e-47 |
| Msa0054480 | Msa0247550 | 0.842175 | 3.036152e-58 | -8.615850e-47 |
| Msa0059110 | Msa0247550 | 0.809946 | 1.471567e-50 | -8.615850e-47 |
| Msa0063530 | Msa0247550 | 0.812338 | 4.458043e-51 | -8.615850e-47 |
| Msa0070700 | Msa0247550 | 0.801660 | 8.109856e-49 | -8.615850e-47 |
| Msa0090520 | Msa0247550 | 0.801264 | 9.773920e-49 | -8.615850e-47 |
| Msa0105620 | Msa0247550 | 0.811123 | 8.195828e-51 | -8.615850e-47 |
| Msa0115400 | Msa0247550 | 0.805211 | 1.489509e-49 | -8.615850e-47 |
| Msa0123360 | Msa0247550 | 0.803645 | 3.158009e-49 | -8.615850e-47 |
| Msa0127020 | Msa0247550 | 0.804495 | 2.101801e-49 | -8.615850e-47 |
| Msa0137550 | Msa0247550 | 0.812633 | 3.842545e-51 | -8.615850e-47 |
| Msa0137990 | Msa0247550 | 0.803642 | 3.162064e-49 | -8.615850e-47 |
| Msa0144370 | Msa0247550 | 0.802681 | 4.997686e-49 | -8.615850e-47 |
| Msa0150820 | Msa0247550 | 0.808721 | 2.694365e-50 | -8.615850e-47 |
| Msa0159170 | Msa0247550 | 0.831030 | 2.102328e-55 | -8.615850e-47 |
| Msa0160550 | Msa0247550 | 0.808862 | 2.513615e-50 | -8.615850e-47 |
| Msa0165660 | Msa0247550 | 0.809802 | 1.580441e-50 | -8.615850e-47 |
| Msa0168230 | Msa0247550 | 0.810661 | 1.031753e-50 | -8.615850e-47 |
| Msa0169280 | Msa0247550 | 0.802793 | 4.739142e-49 | -8.615850e-47 |
| Msa0172970 | Msa0247550 | 0.821463 | 3.984754e-53 | -8.615850e-47 |
| Msa0183900 | Msa0247550 | 0.805227 | 1.477971e-49 | -8.615850e-47 |
| Msa0187120 | Msa0247550 | 0.802605 | 5.181916e-49 | -8.615850e-47 |
| Msa0189300 | Msa0247550 | 0.810536 | 1.097603e-50 | -8.615850e-47 |
| Msa0219690 | Msa0247550 | 0.814467 | 1.517806e-51 | -8.615850e-47 |
| Msa0220720 | Msa0247550 | 0.823037 | 1.718349e-53 | -8.615850e-47 |
| Msa0228070 | Msa0247550 | 0.833841 | 4.229838e-56 | -8.615850e-47 |
| Msa0247550 | Msa0260680 | 0.803270 | 3.777424e-49 | -8.615850e-47 |
| Msa0247550 | Msa0271530 | 0.806391 | 8.414773e-50 | -8.615850e-47 |
| Msa0247550 | Msa0279220 | 0.810216 | 1.287328e-50 | -8.615850e-47 |
| Msa0247550 | Msa0279240 | 0.812589 | 3.929247e-51 | -8.615850e-47 |
| Msa0247550 | Msa0280090 | 0.801576 | 8.436185e-49 | -8.615850e-47 |
| Msa0247550 | Msa0299870 | 0.817681 | 2.906478e-52 | -8.615850e-47 |
| Msa0247550 | Msa0309750 | 0.814855 | 1.245768e-51 | -8.615850e-47 |
| Msa0247550 | Msa0309770 | 0.813038 | 3.132469e-51 | -8.615850e-47 |
| Msa0247550 | Msa0318980 | 0.822006 | 2.984114e-53 | -8.615850e-47 |
| Msa0247550 | Msa0337240 | 0.815685 | 8.144954e-52 | -8.615850e-47 |
| Msa0247550 | Msa0339250 | 0.801742 | 7.801345e-49 | -8.615850e-47 |
| Msa0247550 | Msa0363790 | 0.800503 | 1.397671e-48 | -8.615850e-47 |
| Msa0247550 | Msa0366890 | 0.817064 | 4.001703e-52 | -8.615850e-47 |
| Msa0247550 | Msa0383800 | 0.806185 | 9.302213e-50 | -8.615850e-47 |
| Msa0247550 | Msa0385580 | 0.821990 | 3.008579e-53 | -8.615850e-47 |
| Msa0247550 | Msa0388050 | 0.804834 | 1.785693e-49 | -8.615850e-47 |
| Msa0247550 | Msa0388700 | 0.814248 | 1.696805e-51 | -8.615850e-47 |
| Msa0247550 | Msa0388950 | 0.804421 | 2.178217e-49 | -8.615850e-47 |
| Msa0247550 | Msa0395820 | 0.809750 | 1.621422e-50 | -8.615850e-47 |
| Msa0247550 | Msa0397540 | 0.814008 | 1.916741e-51 | -8.615850e-47 |
| Msa0247550 | Msa0402790 | 0.828129 | 1.067029e-54 | -8.615850e-47 |
| Msa0247550 | Msa0411430 | 0.806515 | 7.924152e-50 | -8.615850e-47 |
| Msa0247550 | Msa0422920 | 0.802039 | 6.778058e-49 | -8.615850e-47 |
| Msa0247550 | Msa0434180 | 0.803727 | 3.036346e-49 | -8.615850e-47 |
| Msa0247550 | Msa0481530 | 0.822269 | 2.592281e-53 | -8.615850e-47 |
| Msa0247550 | Msa0482130 | 0.825079 | 5.698249e-54 | -8.615850e-47 |
| Msa0247550 | Msa0493410 | 0.800135 | 1.660907e-48 | -8.615850e-47 |
| Msa0247550 | Msa0497210 | 0.811080 | 8.371032e-51 | -8.615850e-47 |
| Msa0247550 | Msa0510940 | 0.807967 | 3.902666e-50 | -8.615850e-47 |
| Msa0247550 | Msa0529890 | 0.831980 | 1.226914e-55 | -8.615850e-47 |
| Msa0247550 | Msa0542090 | 0.824105 | 9.666779e-54 | -8.615850e-47 |
| Msa0247550 | Msa0542130 | 0.825739 | 3.978460e-54 | -8.615850e-47 |
| Msa0247550 | Msa0555450 | 0.828393 | 9.219372e-55 | -8.615850e-47 |
| Msa0247550 | Msa0585560 | 0.827607 | 1.425265e-54 | -8.615850e-47 |
| Msa0247550 | Msa0592440 | 0.821444 | 4.024402e-53 | -8.615850e-47 |
| Msa0247550 | Msa0607050 | 0.800302 | 1.535889e-48 | -8.615850e-47 |
| Msa0247550 | Msa0610430 | 0.821708 | 3.498188e-53 | -8.615850e-47 |
| Msa0247550 | Msa0615440 | 0.801357 | 9.352626e-49 | -8.615850e-47 |
| Msa0247550 | Msa0625680 | 0.808853 | 2.524801e-50 | -8.615850e-47 |
| Msa0247550 | Msa0625720 | 0.827323 | 1.666786e-54 | -8.615850e-47 |
| Msa0247550 | Msa0647500 | 0.807202 | 5.672613e-50 | -8.615850e-47 |
| Msa0247550 | Msa0663390 | 0.830653 | 2.602331e-55 | -8.615850e-47 |
| Msa0247550 | Msa0685140 | 0.810049 | 1.398357e-50 | -8.615850e-47 |
| Msa0247550 | Msa0689260 | 0.839613 | 1.426662e-57 | -8.615850e-47 |
| Msa0247550 | Msa0692830 | 0.833463 | 5.257776e-56 | -8.615850e-47 |
| Msa0247550 | Msa0692950 | 0.827797 | 1.282992e-54 | -8.615850e-47 |
| Msa0247550 | Msa0698490 | 0.803999 | 2.666106e-49 | -8.615850e-47 |
| Msa0247550 | Msa0698660 | 0.803923 | 2.764318e-49 | -8.615850e-47 |
| Msa0247550 | Msa0707250 | 0.807458 | 5.006217e-50 | -8.615850e-47 |
| Msa0247550 | Msa0709500 | 0.803092 | 4.111046e-49 | -8.615850e-47 |
| Msa0247550 | Msa0711780 | 0.830484 | 2.862034e-55 | -8.615850e-47 |
| Msa0247550 | Msa0715700 | 0.837316 | 5.584400e-57 | -8.615850e-47 |
| Msa0247550 | Msa0772480 | 0.818354 | 2.048291e-52 | -8.615850e-47 |
| Msa0247550 | Msa0790850 | 0.802312 | 5.954758e-49 | -8.615850e-47 |
| Msa0247550 | Msa0793800 | 0.813002 | 3.190754e-51 | -8.615850e-47 |
| Msa0247550 | Msa0794670 | 0.835605 | 1.522285e-56 | -8.615850e-47 |
| Msa0247550 | Msa0798440 | 0.819930 | 8.968322e-53 | -8.615850e-47 |
| Msa0247550 | Msa0808270 | 0.809200 | 2.128109e-50 | -8.615850e-47 |
| Msa0247550 | Msa0830540 | 0.816006 | 6.906226e-52 | -8.615850e-47 |
| Msa0247550 | Msa0897080 | 0.811838 | 5.730355e-51 | -8.615850e-47 |
| Msa0247550 | Msa0902760 | 0.840864 | 6.724202e-58 | -8.615850e-47 |
| Msa0247550 | Msa0909110 | 0.801685 | 8.013113e-49 | -8.615850e-47 |
| Msa0247550 | Msa0945440 | 0.805958 | 1.038251e-49 | -8.615850e-47 |
| Msa0247550 | Msa0987370 | 0.820986 | 5.133051e-53 | -8.615850e-47 |
| Msa0247550 | Msa0989540 | 0.807257 | 5.522697e-50 | -8.615850e-47 |
| Msa0247550 | Msa1006840 | 0.812022 | 5.225407e-51 | -8.615850e-47 |
| Msa0247550 | Msa1009820 | 0.800549 | 1.368239e-48 | -8.615850e-47 |
| Msa0247550 | Msa1013400 | 0.834801 | 2.428639e-56 | -8.615850e-47 |
| Msa0247550 | Msa1046020 | 0.816281 | 5.996278e-52 | -8.615850e-47 |
| Msa0247550 | Msa1046060 | 0.820617 | 6.240888e-53 | -8.615850e-47 |
| Msa0247550 | Msa1051200 | 0.825838 | 3.767325e-54 | -8.615850e-47 |
| Msa0247550 | Msa1075540 | 0.802445 | 5.591416e-49 | -8.615850e-47 |
| Msa0247550 | Msa1077030 | 0.813568 | 2.396037e-51 | -8.615850e-47 |
| Msa0247550 | Msa1081930 | 0.801752 | 7.764280e-49 | -8.615850e-47 |
| Msa0247550 | Msa1087710 | 0.814789 | 1.287962e-51 | -8.615850e-47 |
| Msa0247550 | Msa1091100 | 0.808360 | 3.218028e-50 | -8.615850e-47 |
| Msa0247550 | Msa1093530 | 0.837180 | 6.052696e-57 | -8.615850e-47 |
| Msa0247550 | Msa1109680 | 0.824736 | 6.868742e-54 | -8.615850e-47 |
| Msa0247550 | Msa1137700 | 0.819767 | 9.771884e-53 | -8.615850e-47 |
| Msa0247550 | Msa1147970 | 0.804479 | 2.118543e-49 | -8.615850e-47 |
| Msa0247550 | Msa1160590 | 0.822270 | 2.590847e-53 | -8.615850e-47 |
| Msa0247550 | Msa1162270 | 0.803646 | 3.156953e-49 | -8.615850e-47 |
| Msa0247550 | Msa1171360 | 0.802006 | 6.883932e-49 | -8.615850e-47 |
| Msa0247550 | Msa1181250 | 0.828677 | 7.872713e-55 | -8.615850e-47 |
| Msa0247550 | Msa1181330 | 0.816310 | 5.905843e-52 | -8.615850e-47 |
| Msa0247550 | Msa1207270 | 0.819173 | 1.334947e-52 | -8.615850e-47 |
| Msa0247550 | Msa1208880 | 0.812204 | 4.768904e-51 | -8.615850e-47 |
| Msa0247550 | Msa1209760 | 0.806006 | 1.014199e-49 | -8.615850e-47 |
| Msa0247550 | Msa1210020 | 0.804060 | 2.588773e-49 | -8.615850e-47 |
| Msa0247550 | Msa1217470 | 0.805499 | 1.295970e-49 | -8.615850e-47 |
| Msa0247550 | Msa1218600 | 0.809458 | 1.873149e-50 | -8.615850e-47 |
| Msa0247550 | Msa1224810 | 0.825039 | 5.823629e-54 | -8.615850e-47 |
| Msa0247550 | Msa1237940 | 0.800490 | 1.406771e-48 | -8.615850e-47 |
| Msa0247550 | Msa1245930 | 0.816776 | 4.645222e-52 | -8.615850e-47 |
| Msa0247550 | Msa1253020 | 0.809944 | 1.472872e-50 | -8.615850e-47 |
| Msa0247550 | Msa1254730 | 0.824099 | 9.695086e-54 | -8.615850e-47 |
| Msa0247550 | Msa1259060 | 0.813565 | 2.400173e-51 | -8.615850e-47 |
| Msa0247550 | Msa1294820 | 0.824616 | 7.329428e-54 | -8.615850e-47 |
| Msa0247550 | Msa1302850 | 0.809461 | 1.870642e-50 | -8.615850e-47 |
| Msa0247550 | Msa1306920 | 0.800514 | 1.390863e-48 | -8.615850e-47 |
| Msa0247550 | Msa1313140 | 0.800435 | 1.442950e-48 | -8.615850e-47 |
| Msa0247550 | Msa1358250 | 0.837474 | 5.087264e-57 | -8.615850e-47 |
| Msa0247550 | Msa1370070 | -0.813690 | 2.253199e-51 | -8.615850e-47 |
| Msa0247550 | Msa1386780 | 0.804777 | 1.835091e-49 | -8.615850e-47 |
| Msa0247550 | Msa1389800 | 0.811141 | 8.120949e-51 | -8.615850e-47 |
| Msa0247550 | Msa1392780 | 0.830007 | 3.741096e-55 | -8.615850e-47 |
| Msa0247550 | Msa1394290 | 0.816419 | 5.583666e-52 | -8.615850e-47 |
| Msa0247550 | Msa1400580 | 0.815925 | 7.200529e-52 | -8.615850e-47 |
| Msa0247550 | Msa1419870 | 0.820415 | 6.943235e-53 | -8.615850e-47 |
| Msa0247550 | Msa1423870 | 0.804074 | 2.572024e-49 | -8.615850e-47 |
| Msa0247550 | Msa1432700 | 0.802510 | 5.420384e-49 | -8.615850e-47 |
| Msa0247550 | Msa1457920 | 0.839469 | 1.555241e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247550 | MtrunA17_Chr2g0302621 | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.49e-100 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247550 | AT1G48170.1 | 70.492 | 122 | 34 | 1 | 19 | 138 | 28 | 149 | 6.64e-61 | 184 |
Find 46 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGCTGGTTGAAGAATTT+AGG | 0.173161 | 2_2:-29964035 | Msa0247550:five_prime_UTR |
| TGGTTACAACTCTGCAAAAT+TGG | 0.187301 | 2_2:-29963718 | Msa0247550:CDS |
| CTTCAACCAGCTCAAGCTTT+TGG | 0.211945 | 2_2:+29964043 | None:intergenic |
| GTTGAAGAATTTAGGGTTTA+GGG | 0.230719 | 2_2:-29964027 | Msa0247550:five_prime_UTR |
| CTCTGTGAACCTTGAACATT+TGG | 0.240441 | 2_2:+29960951 | None:intergenic |
| GCTACCATGATTTCAAAATT+AGG | 0.247882 | 2_2:+29961095 | None:intergenic |
| AAAGATTATCCTTCCAATCT+TGG | 0.292195 | 2_2:+29961178 | None:intergenic |
| GGTTGAAGAATTTAGGGTTT+AGG | 0.292286 | 2_2:-29964028 | Msa0247550:five_prime_UTR |
| GTTTCTGTAACTTCTATACT+TGG | 0.303966 | 2_2:-29963182 | Msa0247550:CDS |
| TGAGCTGGTTGAAGAATTTA+GGG | 0.309442 | 2_2:-29964034 | Msa0247550:five_prime_UTR |
| TGAATTTCTTGTCGATTATC+TGG | 0.312023 | 2_2:-29961003 | Msa0247550:three_prime_UTR |
| TTTGAAATCATGGTAGCTTT+TGG | 0.331413 | 2_2:-29961089 | Msa0247550:three_prime_UTR |
| TCAATGAATTCTGAAGAATT+AGG | 0.335842 | 2_2:-29964003 | Msa0247550:CDS |
| CAAAATTAGGTAACGACATT+GGG | 0.343216 | 2_2:+29961108 | None:intergenic |
| AATTCTGATAATACAGGTTC+TGG | 0.344534 | 2_2:-29963155 | Msa0247550:CDS |
| TCTGGCATTGCTCGTCGATT+AGG | 0.359455 | 2_2:-29963137 | Msa0247550:intron |
| GATTATTCGCTTTCCCAAAC+AGG | 0.366269 | 2_2:-29963875 | Msa0247550:intron |
| GAAAGCGAATAATCTGAAAA+TGG | 0.376727 | 2_2:+29963884 | None:intergenic |
| ATTGATGTTCCAAATGTTCA+AGG | 0.397287 | 2_2:-29960960 | Msa0247550:three_prime_UTR |
| TTTCTGTAACTTCTATACTT+GGG | 0.402096 | 2_2:-29963181 | Msa0247550:CDS |
| GGTTACAACTCTGCAAAATT+GGG | 0.411383 | 2_2:-29963717 | Msa0247550:CDS |
| TTCTGTAACTTCTATACTTG+GGG | 0.415245 | 2_2:-29963180 | Msa0247550:CDS |
| AAGGATAATCTTTGTAGCAT+TGG | 0.434566 | 2_2:-29961168 | Msa0247550:exon |
| ATTCTGAAGAATTAGGAAAA+GGG | 0.436983 | 2_2:-29963996 | Msa0247550:CDS |
| GGGCTACACCAAGCCAAGAT+TGG | 0.437285 | 2_2:-29961191 | Msa0247550:CDS |
| AATTCTGAAGAATTAGGAAA+AGG | 0.448685 | 2_2:-29963997 | Msa0247550:CDS |
| TTGAACATTTGGAACATCAA+TGG | 0.451425 | 2_2:+29960962 | None:intergenic |
| TTACTATCAAAAGGTTCAAA+AGG | 0.453166 | 2_2:+29960882 | None:intergenic |
| TCAAAATTAGGTAACGACAT+TGG | 0.471705 | 2_2:+29961107 | None:intergenic |
| TTATCCTTCCAATCTTGGCT+TGG | 0.480560 | 2_2:+29961183 | None:intergenic |
| AAATGAAAATTACTATCAAA+AGG | 0.485783 | 2_2:+29960873 | None:intergenic |
| TTTATCACAGTGTTGAAGAC+TGG | 0.492297 | 2_2:-29963037 | Msa0247550:intron |
| ATCTTTGTAGCATTGGCTGA+AGG | 0.493123 | 2_2:-29961161 | Msa0247550:three_prime_UTR |
| GACTGGTCTCAATATAATCA+TGG | 0.494309 | 2_2:-29963020 | Msa0247550:CDS |
| ACATTGGGATAATACATGTT+CGG | 0.533538 | 2_2:+29961123 | None:intergenic |
| GAAATTCCAAAAGCTTGAGC+TGG | 0.549558 | 2_2:-29964049 | Msa0247550:five_prime_UTR |
| TCTTTGTAGCATTGGCTGAA+GGG | 0.549792 | 2_2:-29961160 | Msa0247550:three_prime_UTR |
| CTGTAACTTCTATACTTGGG+GGG | 0.558213 | 2_2:-29963178 | Msa0247550:CDS |
| TACACCAAGCCAAGATTGGA+AGG | 0.570954 | 2_2:-29961187 | Msa0247550:CDS |
| ACAAGAAATTCACACATCAA+AGG | 0.589968 | 2_2:+29961014 | None:intergenic |
| AGAGAGCGTACCTCAACCAT+AGG | 0.610302 | 2_2:+29962974 | None:intergenic |
| TCTGTAACTTCTATACTTGG+GGG | 0.614538 | 2_2:-29963179 | Msa0247550:CDS |
| AGATAGATATATGTGTGGAT+TGG | 0.621609 | 2_2:-29963738 | Msa0247550:intron |
| AGCGAATAATCTGAAAATGG+AGG | 0.664738 | 2_2:+29963887 | None:intergenic |
| GTGATAGATAGATATATGTG+TGG | 0.667464 | 2_2:-29963743 | Msa0247550:intron |
| TTAATACTTGCAGAACAATG+TGG | 0.748082 | 2_2:-29963204 | Msa0247550:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAAATTCATATTTTTAAA+TGG | + | chr2_2:29961149-29961168 | None:intergenic | 10.0% |
| !!! | TTTTGAAAAATTATTCATTT+TGG | - | chr2_2:29961827-29961846 | Msa0247550:intron | 10.0% |
| !! | AAATTAAAAGATAAATATCA+TGG | + | chr2_2:29962543-29962562 | None:intergenic | 10.0% |
| !!! | TTGATTTTTAAATTCAATAT+TGG | - | chr2_2:29963602-29963621 | Msa0247550:intron | 10.0% |
| !!! | TTTTGATATTATTACTTCTT+TGG | - | chr2_2:29962947-29962966 | Msa0247550:intron | 15.0% |
| !!! | TTAAACTTTTATAAAGATCT+TGG | - | chr2_2:29963091-29963110 | Msa0247550:intron | 15.0% |
| !! | ACTTGTTTATTAAACAAATT+TGG | + | chr2_2:29963117-29963136 | None:intergenic | 15.0% |
| !! | ATTTGTTTAATAAACAAGTT+AGG | - | chr2_2:29963118-29963137 | Msa0247550:intron | 15.0% |
| !! | TTTGTTTAATAAACAAGTTA+GGG | - | chr2_2:29963119-29963138 | Msa0247550:intron | 15.0% |
| !! | AATTTACAAATTACATTAAC+TGG | + | chr2_2:29963475-29963494 | None:intergenic | 15.0% |
| !!! | ATACAAAAACTTATTAGTTT+GGG | - | chr2_2:29963700-29963719 | Msa0247550:CDS | 15.0% |
| !! | AAATGAAAATTACTATCAAA+AGG | + | chr2_2:29964041-29964060 | None:intergenic | 15.0% |
| !! | AAAAGAATATGAAAACTTAC+AGG | + | chr2_2:29961248-29961267 | None:intergenic | 20.0% |
| !! | TATCAATTGATTAGTATGAT+TGG | - | chr2_2:29961277-29961296 | Msa0247550:intron | 20.0% |
| !! | TATCAATTGATTAGTATGAT+TGG | - | chr2_2:29961277-29961296 | Msa0247550:intron | 20.0% |
| !!! | AAAATTATTCATTTTGGTCA+TGG | - | chr2_2:29961833-29961852 | Msa0247550:intron | 20.0% |
| !! | AAAATAGAGTATAACTACTT+AGG | + | chr2_2:29962859-29962878 | None:intergenic | 20.0% |
| !! | CCTTCTATAAATTATACAAA+CGG | + | chr2_2:29963053-29963072 | None:intergenic | 20.0% |
| !!! | CAAATTTGAAAACTGTTTTA+CGG | + | chr2_2:29963192-29963211 | None:intergenic | 20.0% |
| !! | AAGAATTAACCATCAATTAT+AGG | + | chr2_2:29963445-29963464 | None:intergenic | 20.0% |
| !!! | TTTTTGTATCAGTATTTTCT+CGG | + | chr2_2:29963689-29963708 | None:intergenic | 20.0% |
| !! | GATACAAAAACTTATTAGTT+TGG | - | chr2_2:29963699-29963718 | Msa0247550:CDS | 20.0% |
| !! | TCAATGAATTCTGAAGAATT+AGG | - | chr2_2:29960908-29960927 | Msa0247550:three_prime_UTR | 25.0% |
| !! | AATTCTGAAGAATTAGGAAA+AGG | - | chr2_2:29960914-29960933 | Msa0247550:three_prime_UTR | 25.0% |
| !! | ATTCTGAAGAATTAGGAAAA+GGG | - | chr2_2:29960915-29960934 | Msa0247550:three_prime_UTR | 25.0% |
| ! | AAGAAATTAGGGTTTGAAAA+GGG | + | chr2_2:29961068-29961087 | None:intergenic | 25.0% |
| ! | TGTCAGTATTTCATATATAG+AGG | + | chr2_2:29961402-29961421 | None:intergenic | 25.0% |
| ! | CTATATATGAAATACTGACA+CGG | - | chr2_2:29961402-29961421 | Msa0247550:intron | 25.0% |
| ! | TATCAATTGAGTAGTATGAT+TGG | - | chr2_2:29961434-29961453 | Msa0247550:intron | 25.0% |
| ! | TGTCAGTATTTCATATATAG+AGG | + | chr2_2:29961402-29961421 | None:intergenic | 25.0% |
| ! | CTATATATGAAATACTGACA+CGG | - | chr2_2:29961402-29961421 | Msa0247550:intron | 25.0% |
| ! | TTTCTGTAACTTCTATACTT+GGG | - | chr2_2:29961730-29961749 | Msa0247550:intron | 25.0% |
| ! | TATTCCAAAAAATAGTCCTA+TGG | - | chr2_2:29961921-29961940 | Msa0247550:intron | 25.0% |
| ! | TATTAATAAGAAGAAGGTGA+GGG | + | chr2_2:29962087-29962106 | None:intergenic | 25.0% |
| ! | ATTGCCTATTAATAAGAAGA+AGG | + | chr2_2:29962093-29962112 | None:intergenic | 25.0% |
| ! | CTCCTTATTCTTTCAAAAAT+GGG | + | chr2_2:29962296-29962315 | None:intergenic | 25.0% |
| !!! | GCTTATTTCTACTTAATTGA+CGG | + | chr2_2:29962408-29962427 | None:intergenic | 25.0% |
| ! | CCGTTTGTATAATTTATAGA+AGG | - | chr2_2:29963050-29963069 | Msa0247550:intron | 25.0% |
| ! | CAGGTTTAGAAAAAACTTAT+AGG | + | chr2_2:29963159-29963178 | None:intergenic | 25.0% |
| ! | AATTAACCATCAATTATAGG+TGG | + | chr2_2:29963442-29963461 | None:intergenic | 25.0% |
| ! | TTTACAACTATTCAGTAAAG+AGG | + | chr2_2:29963499-29963518 | None:intergenic | 25.0% |
| ! | GTGAATACTGATGTAAAATA+AGG | + | chr2_2:29963577-29963596 | None:intergenic | 25.0% |
| !!! | ATATTGATTTCCAACTTTCA+TGG | - | chr2_2:29963649-29963668 | Msa0247550:intron | 25.0% |
| !!! | GTTACCTAATTTTGAAATCA+TGG | - | chr2_2:29963812-29963831 | Msa0247550:intron | 25.0% |
| ! | TTACTATCAAAAGGTTCAAA+AGG | + | chr2_2:29964032-29964051 | None:intergenic | 25.0% |
| ! | GTTGAAGAATTTAGGGTTTA+GGG | - | chr2_2:29960884-29960903 | Msa0247550:three_prime_UTR | 30.0% |
| GAAAGCGAATAATCTGAAAA+TGG | + | chr2_2:29961030-29961049 | None:intergenic | 30.0% | |
| AGAAATTAGGGTTTGAAAAG+GGG | + | chr2_2:29961067-29961086 | None:intergenic | 30.0% | |
| GAAGAAATTAGGGTTTGAAA+AGG | + | chr2_2:29961069-29961088 | None:intergenic | 30.0% | |
| AAACCCTAATTTCTTCAACT+GGG | - | chr2_2:29961073-29961092 | Msa0247550:three_prime_UTR | 30.0% | |
| GTGATAGATAGATATATGTG+TGG | - | chr2_2:29961168-29961187 | Msa0247550:exon | 30.0% | |
| AGATAGATATATGTGTGGAT+TGG | - | chr2_2:29961173-29961192 | Msa0247550:exon | 30.0% | |
| AGATTATGCATGGTTATATC+CGG | - | chr2_2:29961614-29961633 | Msa0247550:intron | 30.0% | |
| TTCAGTGCTACATTAATAGA+TGG | - | chr2_2:29961666-29961685 | Msa0247550:intron | 30.0% | |
| TTAATACTTGCAGAACAATG+TGG | - | chr2_2:29961707-29961726 | Msa0247550:intron | 30.0% | |
| GTTTCTGTAACTTCTATACT+TGG | - | chr2_2:29961729-29961748 | Msa0247550:intron | 30.0% | |
| TTCTGTAACTTCTATACTTG+GGG | - | chr2_2:29961731-29961750 | Msa0247550:intron | 30.0% | |
| AATTCTGATAATACAGGTTC+TGG | - | chr2_2:29961756-29961775 | Msa0247550:intron | 30.0% | |
| !!! | TCAACCATAGGACTATTTTT+TGG | + | chr2_2:29961928-29961947 | None:intergenic | 30.0% |
| AAAAAATAGTCCTATGGTTG+AGG | - | chr2_2:29961927-29961946 | Msa0247550:intron | 30.0% | |
| TCATTCTATACACACAGTTT+AGG | - | chr2_2:29961973-29961992 | Msa0247550:intron | 30.0% | |
| CATTCTATACACACAGTTTA+GGG | - | chr2_2:29961974-29961993 | Msa0247550:intron | 30.0% | |
| ATTAATAAGAAGAAGGTGAG+GGG | + | chr2_2:29962086-29962105 | None:intergenic | 30.0% | |
| CTATTAATAAGAAGAAGGTG+AGG | + | chr2_2:29962088-29962107 | None:intergenic | 30.0% | |
| CTCACCTTCTTCTTATTAAT+AGG | - | chr2_2:29962086-29962105 | Msa0247550:intron | 30.0% | |
| ATTCATTTAGATAGCTGGTT+AGG | + | chr2_2:29962149-29962168 | None:intergenic | 30.0% | |
| TGTGTATTCATTTAGATAGC+TGG | + | chr2_2:29962154-29962173 | None:intergenic | 30.0% | |
| ! | GAAGTACTATGACAAAACAT+TGG | - | chr2_2:29962183-29962202 | Msa0247550:intron | 30.0% |
| !! | GTCCCATTTTTGAAAGAATA+AGG | - | chr2_2:29962291-29962310 | Msa0247550:intron | 30.0% |
| GCTCCTTATTCTTTCAAAAA+TGG | + | chr2_2:29962297-29962316 | None:intergenic | 30.0% | |
| ! | AAAAATAGGTCCGATTTGTT+TGG | + | chr2_2:29962319-29962338 | None:intergenic | 30.0% |
| ATCAAATGCCACTGAAAAAT+AGG | + | chr2_2:29962333-29962352 | None:intergenic | 30.0% | |
| !! | TATTTTTCAGTGGCATTTGA+TGG | - | chr2_2:29962332-29962351 | Msa0247550:intron | 30.0% |
| ACATGTTCATCAAGTTTCAA+GGG | + | chr2_2:29962362-29962381 | None:intergenic | 30.0% | |
| AACATGTTCATCAAGTTTCA+AGG | + | chr2_2:29962363-29962382 | None:intergenic | 30.0% | |
| TGAAACTGTTCCTTACATTT+GGG | - | chr2_2:29962565-29962584 | Msa0247550:intron | 30.0% | |
| TAAAGTGGAAAAGGATAGAT+GGG | + | chr2_2:29962625-29962644 | None:intergenic | 30.0% | |
| AGAATCATGTAAAGTGGAAA+AGG | + | chr2_2:29962634-29962653 | None:intergenic | 30.0% | |
| ! | TTTTCCACTTTACATGATTC+TGG | - | chr2_2:29962633-29962652 | Msa0247550:intron | 30.0% |
| CAATGATTTACTACTTGTAG+AGG | + | chr2_2:29962768-29962787 | None:intergenic | 30.0% | |
| CTCTACAAGTAGTAAATCAT+TGG | - | chr2_2:29962766-29962785 | Msa0247550:intron | 30.0% | |
| ATATTGCTTTGTATCATGCT+TGG | - | chr2_2:29962790-29962809 | Msa0247550:intron | 30.0% | |
| TAAACAAGTTAGGGTTAATG+TGG | - | chr2_2:29963128-29963147 | Msa0247550:intron | 30.0% | |
| ATTGTGTTCTATGCTAAAAC+TGG | - | chr2_2:29963214-29963233 | Msa0247550:intron | 30.0% | |
| !!! | CTAAAACTGGCTTTTGAAAT+TGG | - | chr2_2:29963227-29963246 | Msa0247550:intron | 30.0% |
| AATTAGCCACCTATAATTGA+TGG | - | chr2_2:29963433-29963452 | Msa0247550:intron | 30.0% | |
| AAAGATTATCCTTCCAATCT+TGG | + | chr2_2:29963736-29963755 | None:intergenic | 30.0% | |
| AAGGATAATCTTTGTAGCAT+TGG | - | chr2_2:29963743-29963762 | Msa0247550:intron | 30.0% | |
| ACATTGGGATAATACATGTT+CGG | + | chr2_2:29963791-29963810 | None:intergenic | 30.0% | |
| CAAAATTAGGTAACGACATT+GGG | + | chr2_2:29963806-29963825 | None:intergenic | 30.0% | |
| TCAAAATTAGGTAACGACAT+TGG | + | chr2_2:29963807-29963826 | None:intergenic | 30.0% | |
| GCTACCATGATTTCAAAATT+AGG | + | chr2_2:29963819-29963838 | None:intergenic | 30.0% | |
| !! | TTTGAAATCATGGTAGCTTT+TGG | - | chr2_2:29963822-29963841 | Msa0247550:intron | 30.0% |
| ACAAGAAATTCACACATCAA+AGG | + | chr2_2:29963900-29963919 | None:intergenic | 30.0% | |
| ! | TGAATTTCTTGTCGATTATC+TGG | - | chr2_2:29963908-29963927 | Msa0247550:CDS | 30.0% |
| ! | TTGAACATTTGGAACATCAA+TGG | + | chr2_2:29963952-29963971 | None:intergenic | 30.0% |
| ATTGATGTTCCAAATGTTCA+AGG | - | chr2_2:29963951-29963970 | Msa0247550:CDS | 30.0% | |
| TTGAGCTGGTTGAAGAATTT+AGG | - | chr2_2:29960876-29960895 | Msa0247550:three_prime_UTR | 35.0% | |
| TGAGCTGGTTGAAGAATTTA+GGG | - | chr2_2:29960877-29960896 | Msa0247550:three_prime_UTR | 35.0% | |
| ! | GGTTGAAGAATTTAGGGTTT+AGG | - | chr2_2:29960883-29960902 | Msa0247550:three_prime_UTR | 35.0% |
| AGCGAATAATCTGAAAATGG+AGG | + | chr2_2:29961027-29961046 | None:intergenic | 35.0% | |
| AAAAGGGGAAAAACCTGTTT+GGG | + | chr2_2:29961052-29961071 | None:intergenic | 35.0% | |
| CAAACCCTAATTTCTTCAAC+TGG | - | chr2_2:29961072-29961091 | Msa0247550:three_prime_UTR | 35.0% | |
| TGACCCAGTTGAAGAAATTA+GGG | + | chr2_2:29961079-29961098 | None:intergenic | 35.0% | |
| TGGTTACAACTCTGCAAAAT+TGG | - | chr2_2:29961193-29961212 | Msa0247550:CDS | 35.0% | |
| GGTTACAACTCTGCAAAATT+GGG | - | chr2_2:29961194-29961213 | Msa0247550:CDS | 35.0% | |
| GTATGATTGGAGATTATGCA+TGG | - | chr2_2:29961290-29961309 | Msa0247550:intron | 35.0% | |
| !! | ACACCTCTAATATTTGGTGT+CGG | - | chr2_2:29961352-29961371 | Msa0247550:intron | 35.0% |
| GTATGATTGGAGATTATGCA+TGG | - | chr2_2:29961290-29961309 | Msa0247550:intron | 35.0% | |
| !! | ACACCTCTAATATTTGGTGT+CGG | - | chr2_2:29961352-29961371 | Msa0247550:intron | 35.0% |
| GTATGATTGGAGATTATGCA+TGG | - | chr2_2:29961290-29961309 | Msa0247550:intron | 35.0% | |
| TCTAATTCAAGTGTATCCGA+CGG | + | chr2_2:29961643-29961662 | None:intergenic | 35.0% | |
| TCTGTAACTTCTATACTTGG+GGG | - | chr2_2:29961732-29961751 | Msa0247550:intron | 35.0% | |
| ! | TTTATCACAGTGTTGAAGAC+TGG | - | chr2_2:29961874-29961893 | Msa0247550:intron | 35.0% |
| !! | GACTGGTCTCAATATAATCA+TGG | - | chr2_2:29961891-29961910 | Msa0247550:intron | 35.0% |
| ! | TTCATTTGGTGAATCAGTCT+TGG | + | chr2_2:29962056-29962075 | None:intergenic | 35.0% |
| GGTGGTTAATTAGGTAGTTA+GGG | + | chr2_2:29962128-29962147 | None:intergenic | 35.0% | |
| AGGTGGTTAATTAGGTAGTT+AGG | + | chr2_2:29962129-29962148 | None:intergenic | 35.0% | |
| TTACTAATGTTGGATCCAGT+GGG | - | chr2_2:29962269-29962288 | Msa0247550:intron | 35.0% | |
| GAATAAGGAGCCAAACAAAT+CGG | - | chr2_2:29962306-29962325 | Msa0247550:intron | 35.0% | |
| !! | AAATCGGACCTATTTTTCAG+TGG | - | chr2_2:29962322-29962341 | Msa0247550:intron | 35.0% |
| ACGGCTCTGTTCTATTATAA+AGG | + | chr2_2:29962389-29962408 | None:intergenic | 35.0% | |
| ! | TACTGACTAATGTCACAACT+CGG | - | chr2_2:29962475-29962494 | Msa0247550:intron | 35.0% |
| CAAATGTAAGGAACAGTTTC+AGG | + | chr2_2:29962566-29962585 | None:intergenic | 35.0% | |
| CTGAAACTGTTCCTTACATT+TGG | - | chr2_2:29962564-29962583 | Msa0247550:intron | 35.0% | |
| GTAAAGTGGAAAAGGATAGA+TGG | + | chr2_2:29962626-29962645 | None:intergenic | 35.0% | |
| ACAACCAGAATCATGTAAAG+TGG | + | chr2_2:29962640-29962659 | None:intergenic | 35.0% | |
| ! | TACATGATTCTGGTTGTATG+AGG | - | chr2_2:29962643-29962662 | Msa0247550:intron | 35.0% |
| TTGTAGAGGTAGAAAAACAG+AGG | + | chr2_2:29962754-29962773 | None:intergenic | 35.0% | |
| !! | AACGCTATCTGAAAGTATCA+CGG | + | chr2_2:29963306-29963325 | None:intergenic | 35.0% |
| GGCACTAGCATTAGATATTA+TGG | - | chr2_2:29963399-29963418 | Msa0247550:intron | 35.0% | |
| TTCCTACCCAAATATCACAT+TGG | - | chr2_2:29963530-29963549 | Msa0247550:intron | 35.0% | |
| AGCTCTCCAATGTGATATTT+GGG | + | chr2_2:29963539-29963558 | None:intergenic | 35.0% | |
| AAGCTCTCCAATGTGATATT+TGG | + | chr2_2:29963540-29963559 | None:intergenic | 35.0% | |
| TATCTGCAATCCATGAAAGT+TGG | + | chr2_2:29963662-29963681 | None:intergenic | 35.0% | |
| GAAATTCCAAAAGCTTGAGC+TGG | - | chr2_2:29960862-29960881 | Msa0247550:three_prime_UTR | 40.0% | |
| GATTATTCGCTTTCCCAAAC+AGG | - | chr2_2:29961036-29961055 | Msa0247550:three_prime_UTR | 40.0% | |
| GAAAAGGGGAAAAACCTGTT+TGG | + | chr2_2:29961053-29961072 | None:intergenic | 40.0% | |
| GTGACCCAGTTGAAGAAATT+AGG | + | chr2_2:29961080-29961099 | None:intergenic | 40.0% | |
| TGACCGACACCAAATATTAG+AGG | + | chr2_2:29961358-29961377 | None:intergenic | 40.0% | |
| ACGTCGACACCTCTAATATT+TGG | - | chr2_2:29961503-29961522 | Msa0247550:intron | 40.0% | |
| TGACCGACACCAAATATTAG+AGG | + | chr2_2:29961358-29961377 | None:intergenic | 40.0% | |
| CTGTAACTTCTATACTTGGG+GGG | - | chr2_2:29961733-29961752 | Msa0247550:intron | 40.0% | |
| CTATACACACAGTTTAGGGA+AGG | - | chr2_2:29961978-29961997 | Msa0247550:intron | 40.0% | |
| CTCTCAATAAACTACGCACA+AGG | + | chr2_2:29962014-29962033 | None:intergenic | 40.0% | |
| AGCTGGTTAGGTGGTTAATT+AGG | + | chr2_2:29962137-29962156 | None:intergenic | 40.0% | |
| CATTTAGATAGCTGGTTAGG+TGG | + | chr2_2:29962146-29962165 | None:intergenic | 40.0% | |
| GATCCAACATTAGTAAGAGG+AGG | + | chr2_2:29962265-29962284 | None:intergenic | 40.0% | |
| CTGGATCCAACATTAGTAAG+AGG | + | chr2_2:29962268-29962287 | None:intergenic | 40.0% | |
| CTTACTAATGTTGGATCCAG+TGG | - | chr2_2:29962268-29962287 | Msa0247550:intron | 40.0% | |
| !! | CAAACTGGAAAACTTGGTGT+TGG | + | chr2_2:29962430-29962449 | None:intergenic | 40.0% |
| TAAGACCCATATCACTGTGA+AGG | + | chr2_2:29962457-29962476 | None:intergenic | 40.0% | |
| GATTTCTCAGTCTACTGCAT+TGG | - | chr2_2:29962911-29962930 | Msa0247550:intron | 40.0% | |
| ! | GTTTTACGGCATAGAATCTC+AGG | + | chr2_2:29963178-29963197 | None:intergenic | 40.0% |
| !! | AACTATGGTAGTGATGGGTA+AGG | + | chr2_2:29963331-29963350 | None:intergenic | 40.0% |
| AGAATCACGTCATAGTAGCT+CGG | - | chr2_2:29963354-29963373 | Msa0247550:intron | 40.0% | |
| ACCTGCAGTTACTTAGTATC+AGG | - | chr2_2:29963378-29963397 | Msa0247550:intron | 40.0% | |
| CTCCAATGTGATATTTGGGT+AGG | + | chr2_2:29963535-29963554 | None:intergenic | 40.0% | |
| TTATCCTTCCAATCTTGGCT+TGG | + | chr2_2:29963731-29963750 | None:intergenic | 40.0% | |
| !! | ATCTTTGTAGCATTGGCTGA+AGG | - | chr2_2:29963750-29963769 | Msa0247550:intron | 40.0% |
| !! | TCTTTGTAGCATTGGCTGAA+GGG | - | chr2_2:29963751-29963770 | Msa0247550:intron | 40.0% |
| CTCTGTGAACCTTGAACATT+TGG | + | chr2_2:29963963-29963982 | None:intergenic | 40.0% | |
| ! | CTTCAACCAGCTCAAGCTTT+TGG | + | chr2_2:29960871-29960890 | None:intergenic | 45.0% |
| CTGACACATTGACACTGACA+CGG | - | chr2_2:29961327-29961346 | Msa0247550:intron | 45.0% | |
| ACGGCGACACCTCTAATATT+TGG | - | chr2_2:29961346-29961365 | Msa0247550:intron | 45.0% | |
| GGGGGGAATTCTGATAATAC+AGG | - | chr2_2:29961750-29961769 | Msa0247550:intron | 45.0% | |
| GGTGAATCAGTCTTGGACTA+GGG | + | chr2_2:29962049-29962068 | None:intergenic | 45.0% | |
| TGGTGAATCAGTCTTGGACT+AGG | + | chr2_2:29962050-29962069 | None:intergenic | 45.0% | |
| TAAGAAGAAGGTGAGGGGAA+GGG | + | chr2_2:29962081-29962100 | None:intergenic | 45.0% | |
| ATAAGAAGAAGGTGAGGGGA+AGG | + | chr2_2:29962082-29962101 | None:intergenic | 45.0% | |
| TGGCCTCCTCTTACTAATGT+TGG | - | chr2_2:29962259-29962278 | Msa0247550:intron | 45.0% | |
| CTTTCAAAAATGGGACCCAC+TGG | + | chr2_2:29962287-29962306 | None:intergenic | 45.0% | |
| GGTGGACAAACTGGAAAACT+TGG | + | chr2_2:29962436-29962455 | None:intergenic | 45.0% | |
| TGTCCACCTTCACAGTGATA+TGG | - | chr2_2:29962448-29962467 | Msa0247550:intron | 45.0% | |
| GTCCACCTTCACAGTGATAT+GGG | - | chr2_2:29962449-29962468 | Msa0247550:intron | 45.0% | |
| ! | GAGGGGTTGTTTCAAACAGT+GGG | + | chr2_2:29962501-29962520 | None:intergenic | 45.0% |
| ! | CACTGTTTGAAACAACCCCT+CGG | - | chr2_2:29962500-29962519 | Msa0247550:intron | 45.0% |
| ! | ACTGTTTGAAACAACCCCTC+GGG | - | chr2_2:29962501-29962520 | Msa0247550:intron | 45.0% |
| ACTGTTCCTTACATTTGGGC+CGG | - | chr2_2:29962569-29962588 | Msa0247550:intron | 45.0% | |
| AGTGGAAAAGGATAGATGGG+TGG | + | chr2_2:29962622-29962641 | None:intergenic | 45.0% | |
| TTGTATGAGGCACGTTTGGT+CGG | - | chr2_2:29962656-29962675 | Msa0247550:intron | 45.0% | |
| ! | CTCGCAACTATGGTAGTGAT+GGG | + | chr2_2:29963336-29963355 | None:intergenic | 45.0% |
| ! | TCTCGCAACTATGGTAGTGA+TGG | + | chr2_2:29963337-29963356 | None:intergenic | 45.0% |
| TGACGTGATTCTCGCAACTA+TGG | + | chr2_2:29963346-29963365 | None:intergenic | 45.0% | |
| GCCTGATACTAAGTAACTGC+AGG | + | chr2_2:29963382-29963401 | None:intergenic | 45.0% | |
| TACACCAAGCCAAGATTGGA+AGG | - | chr2_2:29963724-29963743 | Msa0247550:CDS | 45.0% | |
| TGGTTATATCCGGTGTCCGT+CGG | - | chr2_2:29961624-29961643 | Msa0247550:intron | 50.0% | |
| ! | TCTGGCATTGCTCGTCGATT+AGG | - | chr2_2:29961774-29961793 | Msa0247550:intron | 50.0% |
| ! | AGAGAGCGTACCTCAACCAT+AGG | + | chr2_2:29961940-29961959 | None:intergenic | 50.0% |
| TGAGGGGAAGGGAGTTCATT+TGG | + | chr2_2:29962070-29962089 | None:intergenic | 50.0% | |
| TTAGTAAGAGGAGGCCAGAG+AGG | + | chr2_2:29962256-29962275 | None:intergenic | 50.0% | |
| CACTGTGAAGGTGGACAAAC+TGG | + | chr2_2:29962445-29962464 | None:intergenic | 50.0% | |
| GACCCATATCACTGTGAAGG+TGG | + | chr2_2:29962454-29962473 | None:intergenic | 50.0% | |
| ! | CGAGGGGTTGTTTCAAACAG+TGG | + | chr2_2:29962502-29962521 | None:intergenic | 50.0% |
| TCAGAATCACTACTCCCGAG+GGG | + | chr2_2:29962518-29962537 | None:intergenic | 50.0% | |
| GTCAGAATCACTACTCCCGA+GGG | + | chr2_2:29962519-29962538 | None:intergenic | 50.0% | |
| AGTCAGAATCACTACTCCCG+AGG | + | chr2_2:29962520-29962539 | None:intergenic | 50.0% | |
| CTGTTCCTTACATTTGGGCC+GGG | - | chr2_2:29962570-29962589 | Msa0247550:intron | 50.0% | |
| CTGGTTGTATGAGGCACGTT+TGG | - | chr2_2:29962652-29962671 | Msa0247550:intron | 50.0% | |
| AGGTCAGGTGGCTTCAGAAT+TGG | - | chr2_2:29962721-29962740 | Msa0247550:intron | 50.0% | |
| CAAGTGTATCCGACGGACAC+CGG | + | chr2_2:29961636-29961655 | None:intergenic | 55.0% | |
| TGCTGCCAGAGTTACCTCTC+TGG | - | chr2_2:29962239-29962258 | Msa0247550:intron | 55.0% | |
| ! | CAGTGCCAGGTTGACCTCTA+GGG | + | chr2_2:29962596-29962615 | None:intergenic | 55.0% |
| ! | ACAGTGCCAGGTTGACCTCT+AGG | + | chr2_2:29962597-29962616 | None:intergenic | 55.0% |
| TAGAGGTCAACCTGGCACTG+TGG | - | chr2_2:29962596-29962615 | Msa0247550:intron | 55.0% | |
| ! | GGAGAGAGCACAGAAGAGGT+TGG | + | chr2_2:29962682-29962701 | None:intergenic | 55.0% |
| CTGAGCTGTTGCAGGAACAG+CGG | + | chr2_2:29962703-29962722 | None:intergenic | 55.0% | |
| TTCCTGCAACAGCTCAGGTC+AGG | - | chr2_2:29962706-29962725 | Msa0247550:intron | 55.0% | |
| GGGCTACACCAAGCCAAGAT+TGG | - | chr2_2:29963720-29963739 | Msa0247550:CDS | 55.0% | |
| GGAGGCCAGAGAGGTAACTC+TGG | + | chr2_2:29962247-29962266 | None:intergenic | 60.0% | |
| TAGGGCCCGGCCCAAATGTA+AGG | + | chr2_2:29962578-29962597 | None:intergenic | 60.0% | |
| ! | CAGCGGAGAGAGCACAGAAG+AGG | + | chr2_2:29962686-29962705 | None:intergenic | 60.0% |
| CGCTGTTCCTGCAACAGCTC+AGG | - | chr2_2:29962701-29962720 | Msa0247550:intron | 60.0% | |
| CACCTGACCTGAGCTGTTGC+AGG | + | chr2_2:29962711-29962730 | None:intergenic | 60.0% | |
| CTGCAACAGCTCAGGTCAGG+TGG | - | chr2_2:29962709-29962728 | Msa0247550:intron | 60.0% | |
| ACATTTGGGCCGGGCCCTAG+AGG | - | chr2_2:29962579-29962598 | Msa0247550:intron | 65.0% | |
| !! | CCAGGTTGACCTCTAGGGCC+CGG | + | chr2_2:29962591-29962610 | None:intergenic | 65.0% |
| AGATGGGTGGCCACAGTGCC+AGG | + | chr2_2:29962609-29962628 | None:intergenic | 65.0% | |
| CCGGGCCCTAGAGGTCAACC+TGG | - | chr2_2:29962588-29962607 | Msa0247550:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 29960860 | 29964073 | 29960860 | ID=Msa0247550;Name=Msa0247550 |
| chr2_2 | mRNA | 29960860 | 29964073 | 29960860 | ID=Msa0247550-mRNA-1;Parent=Msa0247550;Name=Msa0247550-mRNA-1;_AED=0.02;_eAED=0.02;_QI=51|1|1|1|1|1|5|323|142 |
| chr2_2 | exon | 29960860 | 29961254 | 29960860 | ID=Msa0247550-mRNA-1:exon:10603;Parent=Msa0247550-mRNA-1 |
| chr2_2 | exon | 29962985 | 29963049 | 29962985 | ID=Msa0247550-mRNA-1:exon:10602;Parent=Msa0247550-mRNA-1 |
| chr2_2 | exon | 29963138 | 29963213 | 29963138 | ID=Msa0247550-mRNA-1:exon:10601;Parent=Msa0247550-mRNA-1 |
| chr2_2 | exon | 29963686 | 29963754 | 29963686 | ID=Msa0247550-mRNA-1:exon:10600;Parent=Msa0247550-mRNA-1 |
| chr2_2 | exon | 29963876 | 29964073 | 29963876 | ID=Msa0247550-mRNA-1:exon:10599;Parent=Msa0247550-mRNA-1 |
| chr2_2 | five_prime_UTR | 29964023 | 29964073 | 29964023 | ID=Msa0247550-mRNA-1:five_prime_utr;Parent=Msa0247550-mRNA-1 |
| chr2_2 | CDS | 29963876 | 29964022 | 29963876 | ID=Msa0247550-mRNA-1:cds;Parent=Msa0247550-mRNA-1 |
| chr2_2 | CDS | 29963686 | 29963754 | 29963686 | ID=Msa0247550-mRNA-1:cds;Parent=Msa0247550-mRNA-1 |
| chr2_2 | CDS | 29963138 | 29963213 | 29963138 | ID=Msa0247550-mRNA-1:cds;Parent=Msa0247550-mRNA-1 |
| chr2_2 | CDS | 29962985 | 29963049 | 29962985 | ID=Msa0247550-mRNA-1:cds;Parent=Msa0247550-mRNA-1 |
| chr2_2 | CDS | 29961183 | 29961254 | 29961183 | ID=Msa0247550-mRNA-1:cds;Parent=Msa0247550-mRNA-1 |
| chr2_2 | three_prime_UTR | 29960860 | 29961182 | 29960860 | ID=Msa0247550-mRNA-1:three_prime_utr;Parent=Msa0247550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
