Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167820 | XP_013468491.1 | 100.000 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 3.71e-110 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167820 | sp|Q5ZIX3|EAF6_CHICK | 44.444 | 90 | 48 | 1 | 16 | 103 | 21 | 110 | 1.14e-16 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167820 | I3SAI9 | 100.000 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 1.77e-110 | 320 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0167820 | 0.817333 | 3.482371e-52 | -8.615850e-47 |
| Msa0006110 | Msa0167820 | 0.822549 | 2.232420e-53 | -8.615850e-47 |
| Msa0007440 | Msa0167820 | 0.800390 | 1.474069e-48 | -8.615850e-47 |
| Msa0014710 | Msa0167820 | 0.808982 | 2.369186e-50 | -8.615850e-47 |
| Msa0016060 | Msa0167820 | 0.803488 | 3.404195e-49 | -8.615850e-47 |
| Msa0021510 | Msa0167820 | 0.805629 | 1.217400e-49 | -8.615850e-47 |
| Msa0026910 | Msa0167820 | 0.810707 | 1.008065e-50 | -8.615850e-47 |
| Msa0027630 | Msa0167820 | 0.812866 | 3.417099e-51 | -8.615850e-47 |
| Msa0036140 | Msa0167820 | 0.807139 | 5.847595e-50 | -8.615850e-47 |
| Msa0041720 | Msa0167820 | 0.802551 | 5.316001e-49 | -8.615850e-47 |
| Msa0043560 | Msa0167820 | 0.800852 | 1.186478e-48 | -8.615850e-47 |
| Msa0044260 | Msa0167820 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0044330 | Msa0167820 | 0.811842 | 5.718311e-51 | -8.615850e-47 |
| Msa0045790 | Msa0167820 | 0.824291 | 8.741956e-54 | -8.615850e-47 |
| Msa0046160 | Msa0167820 | 0.824032 | 1.005184e-53 | -8.615850e-47 |
| Msa0068680 | Msa0167820 | 0.813655 | 2.293726e-51 | -8.615850e-47 |
| Msa0075880 | Msa0167820 | 0.826403 | 2.766073e-54 | -8.615850e-47 |
| Msa0078900 | Msa0167820 | 0.804314 | 2.292256e-49 | -8.615850e-47 |
| Msa0084380 | Msa0167820 | 0.838634 | 2.558741e-57 | -8.615850e-47 |
| Msa0089750 | Msa0167820 | 0.810677 | 1.023350e-50 | -8.615850e-47 |
| Msa0104240 | Msa0167820 | 0.800026 | 1.747903e-48 | -8.615850e-47 |
| Msa0107640 | Msa0167820 | 0.806906 | 6.550919e-50 | -8.615850e-47 |
| Msa0114060 | Msa0167820 | 0.854899 | 9.049047e-62 | -8.615850e-47 |
| Msa0131330 | Msa0167820 | 0.818711 | 1.700027e-52 | -8.615850e-47 |
| Msa0140500 | Msa0167820 | -0.809584 | 1.760428e-50 | -8.615850e-47 |
| Msa0159930 | Msa0167820 | 0.815397 | 9.439568e-52 | -8.615850e-47 |
| Msa0167820 | Msa0180500 | 0.814261 | 1.686115e-51 | -8.615850e-47 |
| Msa0167820 | Msa0188150 | 0.806652 | 7.413698e-50 | -8.615850e-47 |
| Msa0167820 | Msa0197660 | 0.813724 | 2.214889e-51 | -8.615850e-47 |
| Msa0167820 | Msa0211150 | 0.825568 | 4.366891e-54 | -8.615850e-47 |
| Msa0167820 | Msa0212990 | 0.815041 | 1.132564e-51 | -8.615850e-47 |
| Msa0167820 | Msa0218270 | 0.801210 | 1.002512e-48 | -8.615850e-47 |
| Msa0167820 | Msa0239800 | 0.813742 | 2.194131e-51 | -8.615850e-47 |
| Msa0167820 | Msa0254790 | 0.800816 | 1.206750e-48 | -8.615850e-47 |
| Msa0167820 | Msa0257520 | 0.818358 | 2.044156e-52 | -8.615850e-47 |
| Msa0167820 | Msa0260680 | 0.824227 | 9.050391e-54 | -8.615850e-47 |
| Msa0167820 | Msa0264150 | 0.809534 | 1.804451e-50 | -8.615850e-47 |
| Msa0167820 | Msa0266350 | 0.813624 | 2.329130e-51 | -8.615850e-47 |
| Msa0167820 | Msa0267370 | 0.805280 | 1.440350e-49 | -8.615850e-47 |
| Msa0167820 | Msa0280090 | 0.828158 | 1.050007e-54 | -8.615850e-47 |
| Msa0167820 | Msa0305610 | 0.801591 | 8.374928e-49 | -8.615850e-47 |
| Msa0167820 | Msa0316910 | 0.820395 | 7.016494e-53 | -8.615850e-47 |
| Msa0167820 | Msa0317510 | 0.807512 | 4.874620e-50 | -8.615850e-47 |
| Msa0167820 | Msa0317730 | 0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0167820 | Msa0317970 | 0.809448 | 1.882891e-50 | -8.615850e-47 |
| Msa0167820 | Msa0330340 | 0.816055 | 6.735095e-52 | -8.615850e-47 |
| Msa0167820 | Msa0331000 | 0.802345 | 5.864141e-49 | -8.615850e-47 |
| Msa0167820 | Msa0333030 | 0.815606 | 8.482025e-52 | -8.615850e-47 |
| Msa0167820 | Msa0336320 | 0.804655 | 1.946535e-49 | -8.615850e-47 |
| Msa0167820 | Msa0340450 | 0.803880 | 2.822433e-49 | -8.615850e-47 |
| Msa0167820 | Msa0345970 | 0.828847 | 7.158507e-55 | -8.615850e-47 |
| Msa0167820 | Msa0381610 | -0.811681 | 6.199385e-51 | -8.615850e-47 |
| Msa0167820 | Msa0386920 | 0.835778 | 1.376297e-56 | -8.615850e-47 |
| Msa0167820 | Msa0395790 | 0.814669 | 1.369360e-51 | -8.615850e-47 |
| Msa0167820 | Msa0436760 | 0.843978 | 1.004378e-58 | -8.615850e-47 |
| Msa0167820 | Msa0440750 | 0.841528 | 4.499766e-58 | -8.615850e-47 |
| Msa0167820 | Msa0464680 | 0.810996 | 8.731044e-51 | -8.615850e-47 |
| Msa0167820 | Msa0467490 | 0.805540 | 1.270496e-49 | -8.615850e-47 |
| Msa0167820 | Msa0468320 | 0.813877 | 2.048539e-51 | -8.615850e-47 |
| Msa0167820 | Msa0479170 | 0.808525 | 2.967803e-50 | -8.615850e-47 |
| Msa0167820 | Msa0484720 | 0.823040 | 1.715573e-53 | -8.615850e-47 |
| Msa0167820 | Msa0506670 | 0.817169 | 3.791726e-52 | -8.615850e-47 |
| Msa0167820 | Msa0511310 | 0.808986 | 2.365483e-50 | -8.615850e-47 |
| Msa0167820 | Msa0521670 | 0.802411 | 5.681453e-49 | -8.615850e-47 |
| Msa0167820 | Msa0532980 | 0.812058 | 5.132739e-51 | -8.615850e-47 |
| Msa0167820 | Msa0532990 | 0.810864 | 9.326120e-51 | -8.615850e-47 |
| Msa0167820 | Msa0538910 | 0.805321 | 1.412402e-49 | -8.615850e-47 |
| Msa0167820 | Msa0545700 | 0.807435 | 5.062140e-50 | -8.615850e-47 |
| Msa0167820 | Msa0548920 | 0.801796 | 7.604433e-49 | -8.615850e-47 |
| Msa0167820 | Msa0574390 | 0.801937 | 7.114563e-49 | -8.615850e-47 |
| Msa0167820 | Msa0602390 | 0.819083 | 1.399211e-52 | -8.615850e-47 |
| Msa0167820 | Msa0604510 | 0.800158 | 1.643652e-48 | -8.615850e-47 |
| Msa0167820 | Msa0637900 | 0.802425 | 5.644235e-49 | -8.615850e-47 |
| Msa0167820 | Msa0661190 | -0.806381 | 8.455961e-50 | -8.615850e-47 |
| Msa0167820 | Msa0663240 | 0.815230 | 1.028274e-51 | -8.615850e-47 |
| Msa0167820 | Msa0677410 | 0.817561 | 3.093157e-52 | -8.615850e-47 |
| Msa0167820 | Msa0683510 | 0.807268 | 5.492231e-50 | -8.615850e-47 |
| Msa0167820 | Msa0688480 | 0.833177 | 6.193274e-56 | -8.615850e-47 |
| Msa0167820 | Msa0703780 | 0.800035 | 1.740707e-48 | -8.615850e-47 |
| Msa0167820 | Msa0706400 | 0.805529 | 1.277557e-49 | -8.615850e-47 |
| Msa0167820 | Msa0731940 | 0.837255 | 5.791276e-57 | -8.615850e-47 |
| Msa0167820 | Msa0744040 | 0.811569 | 6.556702e-51 | -8.615850e-47 |
| Msa0167820 | Msa0748730 | 0.800643 | 1.308955e-48 | -8.615850e-47 |
| Msa0167820 | Msa0760130 | 0.814838 | 1.256149e-51 | -8.615850e-47 |
| Msa0167820 | Msa0762970 | 0.814366 | 1.597832e-51 | -8.615850e-47 |
| Msa0167820 | Msa0784480 | 0.802499 | 5.450293e-49 | -8.615850e-47 |
| Msa0167820 | Msa0796700 | 0.812552 | 4.003934e-51 | -8.615850e-47 |
| Msa0167820 | Msa0808270 | 0.812965 | 3.250754e-51 | -8.615850e-47 |
| Msa0167820 | Msa0810220 | 0.826211 | 3.072780e-54 | -8.615850e-47 |
| Msa0167820 | Msa0818060 | 0.816530 | 5.274800e-52 | -8.615850e-47 |
| Msa0167820 | Msa0820770 | 0.805048 | 1.611032e-49 | -8.615850e-47 |
| Msa0167820 | Msa0820850 | 0.822649 | 2.115690e-53 | -8.615850e-47 |
| Msa0167820 | Msa0821190 | 0.807567 | 4.745085e-50 | -8.615850e-47 |
| Msa0167820 | Msa0822500 | 0.805386 | 1.368679e-49 | -8.615850e-47 |
| Msa0167820 | Msa0831110 | 0.804942 | 1.695751e-49 | -8.615850e-47 |
| Msa0167820 | Msa0832340 | 0.817293 | 3.555584e-52 | -8.615850e-47 |
| Msa0167820 | Msa0835800 | 0.838960 | 2.108477e-57 | -8.615850e-47 |
| Msa0167820 | Msa0844490 | 0.809569 | 1.773903e-50 | -8.615850e-47 |
| Msa0167820 | Msa0861090 | 0.806519 | 7.908145e-50 | -8.615850e-47 |
| Msa0167820 | Msa0861130 | 0.814720 | 1.334173e-51 | -8.615850e-47 |
| Msa0167820 | Msa0871270 | 0.809936 | 1.479119e-50 | -8.615850e-47 |
| Msa0167820 | Msa0880950 | 0.803467 | 3.438427e-49 | -8.615850e-47 |
| Msa0167820 | Msa0897330 | 0.818244 | 2.168574e-52 | -8.615850e-47 |
| Msa0167820 | Msa0898750 | 0.800752 | 1.243780e-48 | -8.615850e-47 |
| Msa0167820 | Msa0907950 | 0.817252 | 3.632172e-52 | -8.615850e-47 |
| Msa0167820 | Msa0924310 | 0.818279 | 2.129323e-52 | -8.615850e-47 |
| Msa0167820 | Msa0925250 | 0.829369 | 5.350784e-55 | -8.615850e-47 |
| Msa0167820 | Msa0925290 | 0.814565 | 1.444023e-51 | -8.615850e-47 |
| Msa0167820 | Msa0928130 | 0.821900 | 3.156605e-53 | -8.615850e-47 |
| Msa0167820 | Msa0936300 | 0.812900 | 3.359970e-51 | -8.615850e-47 |
| Msa0167820 | Msa0936390 | 0.812457 | 4.199633e-51 | -8.615850e-47 |
| Msa0167820 | Msa0938220 | 0.816604 | 5.076524e-52 | -8.615850e-47 |
| Msa0167820 | Msa0947660 | 0.805087 | 1.580946e-49 | -8.615850e-47 |
| Msa0167820 | Msa0969520 | 0.813860 | 2.067212e-51 | -8.615850e-47 |
| Msa0167820 | Msa0969810 | 0.826928 | 2.072863e-54 | -8.615850e-47 |
| Msa0167820 | Msa0974080 | 0.815960 | 7.073755e-52 | -8.615850e-47 |
| Msa0167820 | Msa0997370 | 0.807430 | 5.075269e-50 | -8.615850e-47 |
| Msa0167820 | Msa1014540 | 0.807069 | 6.051744e-50 | -8.615850e-47 |
| Msa0167820 | Msa1028590 | 0.804307 | 2.300734e-49 | -8.615850e-47 |
| Msa0167820 | Msa1034500 | 0.800569 | 1.355429e-48 | -8.615850e-47 |
| Msa0167820 | Msa1036710 | -0.803547 | 3.308633e-49 | -8.615850e-47 |
| Msa0167820 | Msa1052330 | 0.813948 | 1.976023e-51 | -8.615850e-47 |
| Msa0167820 | Msa1064710 | 0.801447 | 8.963917e-49 | -8.615850e-47 |
| Msa0167820 | Msa1075540 | 0.818629 | 1.774035e-52 | -8.615850e-47 |
| Msa0167820 | Msa1075650 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0167820 | Msa1079590 | 0.805322 | 1.411628e-49 | -8.615850e-47 |
| Msa0167820 | Msa1085200 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa0167820 | Msa1095650 | 0.809771 | 1.605041e-50 | -8.615850e-47 |
| Msa0167820 | Msa1101090 | 0.811481 | 6.852966e-51 | -8.615850e-47 |
| Msa0167820 | Msa1104560 | 0.815297 | 9.937415e-52 | -8.615850e-47 |
| Msa0167820 | Msa1109680 | 0.810693 | 1.015158e-50 | -8.615850e-47 |
| Msa0167820 | Msa1113170 | 0.815901 | 7.290710e-52 | -8.615850e-47 |
| Msa0167820 | Msa1114590 | 0.804639 | 1.961081e-49 | -8.615850e-47 |
| Msa0167820 | Msa1117780 | 0.803491 | 3.399157e-49 | -8.615850e-47 |
| Msa0167820 | Msa1118610 | 0.806550 | 7.790555e-50 | -8.615850e-47 |
| Msa0167820 | Msa1121490 | 0.822550 | 2.230877e-53 | -8.615850e-47 |
| Msa0167820 | Msa1123380 | 0.820547 | 6.473751e-53 | -8.615850e-47 |
| Msa0167820 | Msa1135470 | 0.807513 | 4.871769e-50 | -8.615850e-47 |
| Msa0167820 | Msa1137570 | 0.816039 | 6.791677e-52 | -8.615850e-47 |
| Msa0167820 | Msa1139890 | 0.817107 | 3.915025e-52 | -8.615850e-47 |
| Msa0167820 | Msa1142670 | 0.803644 | 3.159466e-49 | -8.615850e-47 |
| Msa0167820 | Msa1154280 | 0.808978 | 2.374448e-50 | -8.615850e-47 |
| Msa0167820 | Msa1162780 | 0.824482 | 7.881054e-54 | -8.615850e-47 |
| Msa0167820 | Msa1167340 | 0.813472 | 2.516016e-51 | -8.615850e-47 |
| Msa0167820 | Msa1168160 | 0.800115 | 1.677116e-48 | -8.615850e-47 |
| Msa0167820 | Msa1204530 | 0.807147 | 5.826090e-50 | -8.615850e-47 |
| Msa0167820 | Msa1206360 | 0.800002 | 1.767794e-48 | -8.615850e-47 |
| Msa0167820 | Msa1215920 | 0.802978 | 4.340163e-49 | -8.615850e-47 |
| Msa0167820 | Msa1219000 | 0.804659 | 1.942410e-49 | -8.615850e-47 |
| Msa0167820 | Msa1238930 | 0.807698 | 4.450453e-50 | -8.615850e-47 |
| Msa0167820 | Msa1254730 | 0.803230 | 3.849036e-49 | -8.615850e-47 |
| Msa0167820 | Msa1277660 | 0.813544 | 2.425822e-51 | -8.615850e-47 |
| Msa0167820 | Msa1284680 | 0.806292 | 8.829026e-50 | -8.615850e-47 |
| Msa0167820 | Msa1305810 | 0.802886 | 4.534238e-49 | -8.615850e-47 |
| Msa0167820 | Msa1308870 | 0.821278 | 4.395742e-53 | -8.615850e-47 |
| Msa0167820 | Msa1320410 | 0.809615 | 1.734027e-50 | -8.615850e-47 |
| Msa0167820 | Msa1328710 | 0.804512 | 2.084641e-49 | -8.615850e-47 |
| Msa0167820 | Msa1332760 | 0.801081 | 1.065321e-48 | -8.615850e-47 |
| Msa0167820 | Msa1348890 | 0.815406 | 9.395341e-52 | -8.615850e-47 |
| Msa0167820 | Msa1353470 | 0.801132 | 1.040031e-48 | -8.615850e-47 |
| Msa0167820 | Msa1353980 | 0.831330 | 1.774839e-55 | -8.615850e-47 |
| Msa0167820 | Msa1360980 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0167820 | Msa1373030 | 0.813194 | 2.895162e-51 | -8.615850e-47 |
| Msa0167820 | Msa1374470 | 0.826627 | 2.445487e-54 | -8.615850e-47 |
| Msa0167820 | Msa1379500 | 0.810495 | 1.120654e-50 | -8.615850e-47 |
| Msa0167820 | Msa1382790 | 0.802652 | 5.068339e-49 | -8.615850e-47 |
| Msa0167820 | Msa1384870 | 0.801715 | 7.899706e-49 | -8.615850e-47 |
| Msa0167820 | Msa1389880 | 0.800696 | 1.276833e-48 | -8.615850e-47 |
| Msa0167820 | Msa1390700 | 0.805838 | 1.100468e-49 | -8.615850e-47 |
| Msa0167820 | Msa1392910 | 0.801480 | 8.827625e-49 | -8.615850e-47 |
| Msa0167820 | Msa1394380 | 0.804176 | 2.449364e-49 | -8.615850e-47 |
| Msa0167820 | Msa1395900 | 0.809947 | 1.471018e-50 | -8.615850e-47 |
| Msa0167820 | Msa1407190 | 0.804646 | 1.954918e-49 | -8.615850e-47 |
| Msa0167820 | Msa1409700 | 0.806341 | 8.622992e-50 | -8.615850e-47 |
| Msa0167820 | Msa1411020 | 0.821588 | 3.728263e-53 | -8.615850e-47 |
| Msa0167820 | Msa1412530 | 0.811900 | 5.553554e-51 | -8.615850e-47 |
| Msa0167820 | Msa1412640 | 0.848656 | 5.333740e-60 | -8.615850e-47 |
| Msa0167820 | Msa1420490 | 0.815697 | 8.093479e-52 | -8.615850e-47 |
| Msa0167820 | Msa1421990 | 0.816211 | 6.215136e-52 | -8.615850e-47 |
| Msa0167820 | Msa1423390 | 0.819045 | 1.427179e-52 | -8.615850e-47 |
| Msa0167820 | Msa1424290 | 0.818078 | 2.365008e-52 | -8.615850e-47 |
| Msa0167820 | Msa1424750 | 0.800173 | 1.631578e-48 | -8.615850e-47 |
| Msa0167820 | Msa1432130 | 0.810401 | 1.173843e-50 | -8.615850e-47 |
| Msa0167820 | Msa1434350 | 0.819114 | 1.376319e-52 | -8.615850e-47 |
| Msa0167820 | Msa1436480 | 0.823808 | 1.134530e-53 | -8.615850e-47 |
| Msa0167820 | Msa1439320 | 0.818662 | 1.743663e-52 | -8.615850e-47 |
| Msa0167820 | Msa1440310 | 0.805661 | 1.198701e-49 | -8.615850e-47 |
| Msa0167820 | Msa1440370 | 0.820947 | 5.240198e-53 | -8.615850e-47 |
| Msa0167820 | Msa1440810 | 0.820692 | 5.995918e-53 | -8.615850e-47 |
| Msa0167820 | Msa1445390 | -0.806923 | 6.498559e-50 | -8.615850e-47 |
| Msa0167820 | Msa1449340 | -0.825541 | 4.430751e-54 | -8.615850e-47 |
| Msa0167820 | Msa1451160 | 0.802555 | 5.307150e-49 | -8.615850e-47 |
| Msa0167820 | Msa1464810 | 0.805139 | 1.541708e-49 | -8.615850e-47 |
| Msa0167820 | Msa1466540 | 0.802896 | 4.513037e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167820 | MtrunA17_Chr1g0183901 | 100.000 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 3.42e-114 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167820 | AT4G14385.1 | 68.056 | 144 | 40 | 2 | 3 | 143 | 2 | 142 | 2.09e-57 | 177 |
| Msa0167820 | AT4G14385.2 | 72.807 | 114 | 31 | 0 | 3 | 116 | 2 | 115 | 9.41e-51 | 159 |
| Msa0167820 | AT4G14385.5 | 72.000 | 100 | 28 | 0 | 3 | 102 | 2 | 101 | 2.88e-41 | 134 |
| Msa0167820 | AT4G14385.9 | 72.000 | 100 | 28 | 0 | 3 | 102 | 2 | 101 | 2.88e-41 | 134 |
| Msa0167820 | AT4G14385.6 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 6.88e-36 | 121 |
| Msa0167820 | AT4G14385.7 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 6.88e-36 | 121 |
| Msa0167820 | AT4G14385.4 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 6.88e-36 | 121 |
| Msa0167820 | AT4G14385.8 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 6.88e-36 | 121 |
| Msa0167820 | AT4G14385.3 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 6.88e-36 | 121 |
Find 54 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAATCGTTCCTTGAAAA+TGG | 0.219889 | 1_4:-49867944 | Msa0167820:exon |
| TCCTCATTCTATGTATATAT+TGG | 0.258578 | 1_4:-49865086 | Msa0167820:three_prime_UTR |
| GTCTGAAACAGAGTAAAATT+TGG | 0.278525 | 1_4:-49867998 | Msa0167820:five_prime_UTR |
| TATGGAAACAAGTTATTTAC+AGG | 0.281655 | 1_4:-49867303 | Msa0167820:CDS |
| ACGAAGCTCTTCATGAAGTT+TGG | 0.303537 | 1_4:+49867759 | None:intergenic |
| CTCGGCACAGGTTTATGATA+TGG | 0.310852 | 1_4:-49867321 | Msa0167820:intron |
| CTTGCTCTCTTCGCATCTCT+TGG | 0.327976 | 1_4:+49865261 | None:intergenic |
| ACAGTGTGGCAATGTATTAA+AGG | 0.345831 | 1_4:-49867273 | Msa0167820:CDS |
| GGCGCACCTCTTCCTTTCTT+CGG | 0.350577 | 1_4:+49865282 | None:intergenic |
| TCAGATGGGAGATCAGATTT+TGG | 0.357334 | 1_4:-49865497 | Msa0167820:intron |
| TCTGAAACAGAGTAAAATTT+GGG | 0.361347 | 1_4:-49867997 | Msa0167820:five_prime_UTR |
| GGTGGAACAATTTATGCAAA+TGG | 0.372296 | 1_4:-49865458 | Msa0167820:CDS |
| GAACGATTTGATTGAGGATT+CGG | 0.389452 | 1_4:+49867955 | None:intergenic |
| AATGTATTAAAGGGATTTGA+AGG | 0.395885 | 1_4:-49867263 | Msa0167820:CDS |
| AAGTTGATGTTTACAGTTTG+CGG | 0.409602 | 1_4:-49864915 | Msa0167820:three_prime_UTR |
| TAATGAAAAGAGCCTGTCTT+CGG | 0.428840 | 1_4:+49866536 | None:intergenic |
| TTTCCAAGGTAGTGGTACTC+TGG | 0.439938 | 1_4:+49864878 | None:intergenic |
| TTTGGTCCTGGTCGATCAAA+AGG | 0.448086 | 1_4:-49865479 | Msa0167820:CDS |
| GATCAAACTTAGTTCTGTAC+AGG | 0.449061 | 1_4:+49864950 | None:intergenic |
| AATGAAAAGAGCCTGTCTTC+GGG | 0.452201 | 1_4:+49866537 | None:intergenic |
| TTCAATCACAATGTCATGTC+AGG | 0.452440 | 1_4:+49865201 | None:intergenic |
| CAGTGTTCTTTGTTGACGAC+AGG | 0.457160 | 1_4:+49867237 | None:intergenic |
| GTAGAAAATCCACGACTACT+AGG | 0.457915 | 1_4:+49865061 | None:intergenic |
| CAGTGTGGCAATGTATTAAA+GGG | 0.460090 | 1_4:-49867272 | Msa0167820:CDS |
| TTCAAGGAACGATTTGATTG+AGG | 0.473788 | 1_4:+49867949 | None:intergenic |
| ACAAGTTATTTACAGGATCC+TGG | 0.477906 | 1_4:-49867296 | Msa0167820:CDS |
| GTGGAACAATTTATGCAAAT+GGG | 0.480539 | 1_4:-49865457 | Msa0167820:CDS |
| GCTTCGTAATATTGAAAAGC+AGG | 0.480561 | 1_4:-49867743 | Msa0167820:intron |
| CAAGAGATGCGAAGAGAGCA+AGG | 0.508415 | 1_4:-49865260 | Msa0167820:CDS |
| AATACATTGCCACACTGTCC+AGG | 0.510409 | 1_4:+49867278 | None:intergenic |
| TAGGCAGAAGAGCTTGCAGC+TGG | 0.517903 | 1_4:-49865610 | Msa0167820:CDS |
| GAAAGTTTCAGCCCGAAGAC+AGG | 0.522864 | 1_4:-49866548 | Msa0167820:CDS |
| ACCAATGGCCTATCTAATGC+AGG | 0.527926 | 1_4:+49865119 | None:intergenic |
| GGTGAACCCTTCAGCAATGT+TGG | 0.540152 | 1_4:-49867803 | Msa0167820:CDS |
| TTTGGCTCTTCTACTAAGCA+AGG | 0.544435 | 1_4:+49867777 | None:intergenic |
| TATAGGGGTAAACCGAAGAA+AGG | 0.552151 | 1_4:-49865294 | Msa0167820:intron |
| AAACATCAACTTCTACAAGT+TGG | 0.554678 | 1_4:+49864926 | None:intergenic |
| ACCTGCATTAGATAGGCCAT+TGG | 0.559678 | 1_4:-49865120 | Msa0167820:three_prime_UTR |
| GAGCTTGCAGCTGGACGAGA+CGG | 0.560192 | 1_4:-49865601 | Msa0167820:intron |
| GCCAATATATACATAGAATG+AGG | 0.561937 | 1_4:+49865085 | None:intergenic |
| GAGGAATTGCAGAGAACCAA+TGG | 0.564055 | 1_4:+49865104 | None:intergenic |
| AAGGAAGCCAACATTGCTGA+AGG | 0.567280 | 1_4:+49867796 | None:intergenic |
| AATCCAGAGTACCACTACCT+TGG | 0.581131 | 1_4:-49864881 | Msa0167820:three_prime_UTR |
| TCAGAAACACACCGCTGGCG+AGG | 0.588747 | 1_4:+49866503 | None:intergenic |
| ATGTATTAAAGGGATTTGAA+GGG | 0.608853 | 1_4:-49867262 | Msa0167820:CDS |
| ATATTGGCTCCTAGTAGTCG+TGG | 0.609190 | 1_4:-49865070 | Msa0167820:three_prime_UTR |
| GACATTGTGATTGAACATGC+TGG | 0.614238 | 1_4:-49865193 | Msa0167820:exon |
| GGTAAACCGAAGAAAGGAAG+AGG | 0.619973 | 1_4:-49865288 | Msa0167820:CDS |
| ATCTTCAGTGACCTCGCCAG+CGG | 0.629189 | 1_4:-49866514 | Msa0167820:intron |
| GGTCCTGGTCGATCAAAAGG+TGG | 0.634647 | 1_4:-49865476 | Msa0167820:CDS |
| AAGAGATGCGAAGAGAGCAA+GGG | 0.657814 | 1_4:-49865259 | Msa0167820:CDS |
| AGGAAGCCAACATTGCTGAA+GGG | 0.663989 | 1_4:+49867797 | None:intergenic |
| TTACAGGATCCTGGACAGTG+TGG | 0.680227 | 1_4:-49867287 | Msa0167820:CDS |
| TCCTTGAAAATGGAATCCGA+AGG | 0.698033 | 1_4:-49867934 | Msa0167820:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTATATTAATTTTT+AGG | - | chr1_4:49864961-49864980 | Msa0167820:three_prime_UTR | 0.0% |
| !! | ATTAAAAAAAAATTTAATCC+AGG | + | chr1_4:49865125-49865144 | None:intergenic | 10.0% |
| !!! | AATTATTTTGAATTTTCATT+TGG | - | chr1_4:49865155-49865174 | Msa0167820:three_prime_UTR | 10.0% |
| !!! | ATTATTTTGAATTTTCATTT+GGG | - | chr1_4:49865156-49865175 | Msa0167820:three_prime_UTR | 10.0% |
| !!! | AATAACTATATATTTTTACA+TGG | + | chr1_4:49866114-49866133 | None:intergenic | 10.0% |
| !!! | ATTCTTTTGTAATTTCAATT+TGG | - | chr1_4:49864922-49864941 | Msa0167820:three_prime_UTR | 15.0% |
| !! | AATACAATTTAACCTTAAAT+TGG | - | chr1_4:49865406-49865425 | Msa0167820:intron | 15.0% |
| !! | ATACAATTTAACCTTAAATT+GGG | - | chr1_4:49865407-49865426 | Msa0167820:intron | 15.0% |
| !! | AATCACAAATCATATTTATT+AGG | - | chr1_4:49865824-49865843 | Msa0167820:intron | 15.0% |
| !!! | TGAATCTATTTTTTTTTTGT+TGG | - | chr1_4:49866211-49866230 | Msa0167820:intron | 15.0% |
| !!! | ATATCTTTTTATCTAATTCT+GGG | + | chr1_4:49866342-49866361 | None:intergenic | 15.0% |
| !!! | TATATCTTTTTATCTAATTC+TGG | + | chr1_4:49866343-49866362 | None:intergenic | 15.0% |
| !!! | ATATCTTTTTATCTAATTCT+GGG | + | chr1_4:49866342-49866361 | None:intergenic | 15.0% |
| !!! | TATATCTTTTTATCTAATTC+TGG | + | chr1_4:49866343-49866362 | None:intergenic | 15.0% |
| !!! | AGTTTTAGCAAATATAAATT+TGG | + | chr1_4:49866913-49866932 | None:intergenic | 15.0% |
| !! | GTCATTATTAGAAATAATTA+TGG | - | chr1_4:49866982-49867001 | Msa0167820:intron | 15.0% |
| !!! | TAACTTTATTGTTTTTGAAT+TGG | - | chr1_4:49867390-49867409 | Msa0167820:intron | 15.0% |
| !!! | GATTAAATTTTCAATGCAAT+AGG | - | chr1_4:49865371-49865390 | Msa0167820:intron | 20.0% |
| !! | CCATAAATGAATAAAAATCA+TGG | + | chr1_4:49865866-49865885 | None:intergenic | 20.0% |
| !!! | CCATGATTTTTATTCATTTA+TGG | - | chr1_4:49865863-49865882 | Msa0167820:intron | 20.0% |
| !!! | ATTTTTATTCATTTATGGTC+AGG | - | chr1_4:49865868-49865887 | Msa0167820:intron | 20.0% |
| !!! | AATCTTACTAAGATTTTAGA+TGG | - | chr1_4:49865987-49866006 | Msa0167820:intron | 20.0% |
| !! | GTGTTTGAATTAATAAGAAA+AGG | - | chr1_4:49866019-49866038 | Msa0167820:intron | 20.0% |
| !!! | TGTTTCAAATGGATTAAAAT+TGG | + | chr1_4:49866666-49866685 | None:intergenic | 20.0% |
| !!! | AATTTTAATCCATTTGAAAC+AGG | - | chr1_4:49866665-49866684 | Msa0167820:intron | 20.0% |
| !! | TGCGGTTATTAATTTATATT+TGG | + | chr1_4:49866712-49866731 | None:intergenic | 20.0% |
| !!! | TTATATTTGCTAAAACTTAG+AGG | - | chr1_4:49866916-49866935 | Msa0167820:intron | 20.0% |
| !! | TAAACAGAATTGACAATAAA+AGG | + | chr1_4:49867086-49867105 | None:intergenic | 20.0% |
| !! | AAAAATCATCATGTTACTAT+AGG | - | chr1_4:49867488-49867507 | Msa0167820:intron | 20.0% |
| !! | AAAATCATCATGTTACTATA+GGG | - | chr1_4:49867489-49867508 | Msa0167820:intron | 20.0% |
| !!! | AAATGTTTTTTTTCTTTCCA+AGG | + | chr1_4:49867938-49867957 | None:intergenic | 20.0% |
| !!! | TAGAACATTTTCACTTTATT+GGG | + | chr1_4:49867962-49867981 | None:intergenic | 20.0% |
| !!! | ATAGAACATTTTCACTTTAT+TGG | + | chr1_4:49867963-49867982 | None:intergenic | 20.0% |
| !! | TCTGAAACAGAGTAAAATTT+GGG | - | chr1_4:49864802-49864821 | Msa0167820:three_prime_UTR | 25.0% |
| !!! | AGAGTAAAATTTGGGATTTT+AGG | - | chr1_4:49864810-49864829 | Msa0167820:three_prime_UTR | 25.0% |
| !!! | GAGTAAAATTTGGGATTTTA+GGG | - | chr1_4:49864811-49864830 | Msa0167820:three_prime_UTR | 25.0% |
| ! | CGAAAAGTAACATGAATTAA+GGG | + | chr1_4:49864897-49864916 | None:intergenic | 25.0% |
| ! | TCGAAAAGTAACATGAATTA+AGG | + | chr1_4:49864898-49864917 | None:intergenic | 25.0% |
| !!! | ATTTTTAGGTCAAAAAAGTG+CGG | - | chr1_4:49864975-49864994 | Msa0167820:three_prime_UTR | 25.0% |
| !!! | ACTTTTTCAATTTTAGCTTC+TGG | - | chr1_4:49865081-49865100 | Msa0167820:three_prime_UTR | 25.0% |
| !!! | CTTTTTCAATTTTAGCTTCT+GGG | - | chr1_4:49865082-49865101 | Msa0167820:three_prime_UTR | 25.0% |
| ! | TTTCAATGCAATAGGATAAT+TGG | - | chr1_4:49865379-49865398 | Msa0167820:intron | 25.0% |
| ! | TTCAATGCAATAGGATAATT+GGG | - | chr1_4:49865380-49865399 | Msa0167820:intron | 25.0% |
| ! | TATGGAAACAAGTTATTTAC+AGG | - | chr1_4:49865496-49865515 | Msa0167820:CDS | 25.0% |
| ! | AATGTATTAAAGGGATTTGA+AGG | - | chr1_4:49865536-49865555 | Msa0167820:intron | 25.0% |
| ! | ATGTATTAAAGGGATTTGAA+GGG | - | chr1_4:49865537-49865556 | Msa0167820:intron | 25.0% |
| ! | AAAAAGAAAGAAAGCTAAAG+AGG | + | chr1_4:49865599-49865618 | None:intergenic | 25.0% |
| ! | AATCATATTTATTAGGCATC+TGG | - | chr1_4:49865831-49865850 | Msa0167820:intron | 25.0% |
| !!! | TAGCACGTTAATTTTTTACT+AGG | - | chr1_4:49866576-49866595 | Msa0167820:intron | 25.0% |
| ! | CATATGATATAATTGAGTCT+AGG | + | chr1_4:49866749-49866768 | None:intergenic | 25.0% |
| !! | AAAGCATTTAATTTCTCAAC+CGG | + | chr1_4:49866853-49866872 | None:intergenic | 25.0% |
| ! | AATTAAATGCTTTACATGAG+TGG | - | chr1_4:49866860-49866879 | Msa0167820:intron | 25.0% |
| !! | TGTTTTATCAACATGAAACT+TGG | + | chr1_4:49867022-49867041 | None:intergenic | 25.0% |
| ! | TTGACAATAAAAGGCTTAAA+AGG | + | chr1_4:49867077-49867096 | None:intergenic | 25.0% |
| ! | TTGTCAATTCTGTTTAATCA+TGG | - | chr1_4:49867090-49867109 | Msa0167820:intron | 25.0% |
| !! | GATCTTCATCTTTTTATTGT+AGG | - | chr1_4:49867170-49867189 | Msa0167820:intron | 25.0% |
| ! | GAAGTCATTGAAATGTTTAT+AGG | + | chr1_4:49867230-49867249 | None:intergenic | 25.0% |
| ! | ATATTTCCATTTATCTCAGA+TGG | - | chr1_4:49867287-49867306 | Msa0167820:CDS | 25.0% |
| ! | TATTTCCATTTATCTCAGAT+GGG | - | chr1_4:49867288-49867307 | Msa0167820:CDS | 25.0% |
| ! | TACATATTTGACATGATTTG+CGG | + | chr1_4:49867445-49867464 | None:intergenic | 25.0% |
| ! | AAATCATCATGTTACTATAG+GGG | - | chr1_4:49867490-49867509 | Msa0167820:intron | 25.0% |
| ! | TCCTCATTCTATGTATATAT+TGG | - | chr1_4:49867713-49867732 | Msa0167820:intron | 25.0% |
| ! | CTTTGTGCAACATAAAAAAT+TGG | - | chr1_4:49867777-49867796 | Msa0167820:CDS | 25.0% |
| !! | TATCTAATCATTTTCACAAG+TGG | + | chr1_4:49867998-49868017 | None:intergenic | 25.0% |
| ! | GTCTGAAACAGAGTAAAATT+TGG | - | chr1_4:49864801-49864820 | Msa0167820:three_prime_UTR | 30.0% |
| ATCAAATCGTTCCTTGAAAA+TGG | - | chr1_4:49864855-49864874 | Msa0167820:three_prime_UTR | 30.0% | |
| GAATTAAGGGTTATTACCTT+CGG | + | chr1_4:49864884-49864903 | None:intergenic | 30.0% | |
| ATGTACATTTCTATGAAGCA+CGG | - | chr1_4:49865230-49865249 | Msa0167820:CDS | 30.0% | |
| ! | ATCTGTGTGTATTTTGTTCT+CGG | - | chr1_4:49865460-49865479 | Msa0167820:CDS | 30.0% |
| GATACTCAAAACTACAGATT+CGG | + | chr1_4:49865751-49865770 | None:intergenic | 30.0% | |
| ATATTTATTAGGCATCTGGT+CGG | - | chr1_4:49865835-49865854 | Msa0167820:intron | 30.0% | |
| TAACAAAACAGAATGCATGA+AGG | + | chr1_4:49866169-49866188 | None:intergenic | 30.0% | |
| !! | TGTTTCTGATTTTCAGTGAT+AGG | - | chr1_4:49866310-49866329 | Msa0167820:intron | 30.0% |
| ! | TCTTTTTATCTAATTCTGGG+TGG | + | chr1_4:49866339-49866358 | None:intergenic | 30.0% |
| TTACATCCTTATCATGAAAG+TGG | - | chr1_4:49866514-49866533 | Msa0167820:intron | 30.0% | |
| ! | ATAGTACTTTTCAGTGACTT+TGG | - | chr1_4:49866539-49866558 | Msa0167820:CDS | 30.0% |
| !!! | TTTTCAGTGACTTTGGTTTT+TGG | - | chr1_4:49866546-49866565 | Msa0167820:CDS | 30.0% |
| ATGATAGAAGTGATTACAAC+AGG | - | chr1_4:49866599-49866618 | Msa0167820:intron | 30.0% | |
| TAGGAGGAAATTATTAACTG+CGG | + | chr1_4:49866730-49866749 | None:intergenic | 30.0% | |
| ATGATATAATTGAGTCTAGG+AGG | + | chr1_4:49866746-49866765 | None:intergenic | 30.0% | |
| TGTGTTTGATCTTTGATACA+CGG | - | chr1_4:49866776-49866795 | Msa0167820:intron | 30.0% | |
| ! | TCTGGAACAATAAATTACCA+GGG | + | chr1_4:49866813-49866832 | None:intergenic | 30.0% |
| !! | TTCTGGAACAATAAATTACC+AGG | + | chr1_4:49866814-49866833 | None:intergenic | 30.0% |
| GAAATGTGAATGTAAACTTC+TGG | + | chr1_4:49866831-49866850 | None:intergenic | 30.0% | |
| GAAGTTTACATTCACATTTC+CGG | - | chr1_4:49866831-49866850 | Msa0167820:intron | 30.0% | |
| GCAAAGTTGAAATAAATGAC+AGG | + | chr1_4:49866891-49866910 | None:intergenic | 30.0% | |
| TAGAAATAATTATGGCTGAC+AGG | - | chr1_4:49866990-49867009 | Msa0167820:intron | 30.0% | |
| ! | AAAAGGAGGGATCATTTTAT+GGG | + | chr1_4:49867060-49867079 | None:intergenic | 30.0% |
| ! | TAAAAGGAGGGATCATTTTA+TGG | + | chr1_4:49867061-49867080 | None:intergenic | 30.0% |
| CAATAAAAGGCTTAAAAGGA+GGG | + | chr1_4:49867073-49867092 | None:intergenic | 30.0% | |
| ACAATAAAAGGCTTAAAAGG+AGG | + | chr1_4:49867074-49867093 | None:intergenic | 30.0% | |
| GTGGAACAATTTATGCAAAT+GGG | - | chr1_4:49867342-49867361 | Msa0167820:intron | 30.0% | |
| ! | CAACTTTCTGCTAAACTTTT+TGG | - | chr1_4:49867637-49867656 | Msa0167820:intron | 30.0% |
| GCCAATATATACATAGAATG+AGG | + | chr1_4:49867717-49867736 | None:intergenic | 30.0% | |
| AAACATCAACTTCTACAAGT+TGG | + | chr1_4:49867876-49867895 | None:intergenic | 30.0% | |
| !! | AAGTTGATGTTTACAGTTTG+CGG | - | chr1_4:49867884-49867903 | Msa0167820:intron | 30.0% |
| !!! | TTTTTTTCTTTCCAAGGTAG+TGG | + | chr1_4:49867932-49867951 | None:intergenic | 30.0% |
| GAACGATTTGATTGAGGATT+CGG | + | chr1_4:49864847-49864866 | None:intergenic | 35.0% | |
| TTCAAGGAACGATTTGATTG+AGG | + | chr1_4:49864853-49864872 | None:intergenic | 35.0% | |
| GCTTCGTAATATTGAAAAGC+AGG | - | chr1_4:49865056-49865075 | Msa0167820:three_prime_UTR | 35.0% | |
| AATCCAGGATAGTCAAAGAA+TGG | + | chr1_4:49865110-49865129 | None:intergenic | 35.0% | |
| CAAGTAGATGACCCAATTTA+AGG | + | chr1_4:49865421-49865440 | None:intergenic | 35.0% | |
| ACAAGTTATTTACAGGATCC+TGG | - | chr1_4:49865503-49865522 | Msa0167820:intron | 35.0% | |
| ACAGTGTGGCAATGTATTAA+AGG | - | chr1_4:49865526-49865545 | Msa0167820:intron | 35.0% | |
| CAGTGTGGCAATGTATTAAA+GGG | - | chr1_4:49865527-49865546 | Msa0167820:intron | 35.0% | |
| TTTCGATGGTACTTCTTCTA+CGG | + | chr1_4:49865720-49865739 | None:intergenic | 35.0% | |
| ATTCGGACAGAAAATTTCGA+TGG | + | chr1_4:49865734-49865753 | None:intergenic | 35.0% | |
| !!! | CTGTAGTTTTGAGTATCCTA+AGG | - | chr1_4:49865754-49865773 | Msa0167820:intron | 35.0% |
| TTGAGTATCCTAAGGATGAT+AGG | - | chr1_4:49865762-49865781 | Msa0167820:intron | 35.0% | |
| TTATCCATCCTATCATCCTT+AGG | + | chr1_4:49865773-49865792 | None:intergenic | 35.0% | |
| TATTTATTAGGCATCTGGTC+GGG | - | chr1_4:49865836-49865855 | Msa0167820:intron | 35.0% | |
| GTCAGGAAAAGCAAAATCAT+GGG | - | chr1_4:49865885-49865904 | Msa0167820:intron | 35.0% | |
| ! | TGCTGAAAGCACAATGAAAT+TGG | - | chr1_4:49866057-49866076 | Msa0167820:intron | 35.0% |
| TAATGAAAAGAGCCTGTCTT+CGG | + | chr1_4:49866266-49866285 | None:intergenic | 35.0% | |
| CTAGTCACACTCTTATTACT+TGG | + | chr1_4:49866443-49866462 | None:intergenic | 35.0% | |
| ! | CAAGTAATAAGAGTGTGACT+AGG | - | chr1_4:49866441-49866460 | Msa0167820:intron | 35.0% |
| CTATGACCACTTTCATGATA+AGG | + | chr1_4:49866523-49866542 | None:intergenic | 35.0% | |
| GAAATGCTTCCTGTTTCAAA+TGG | + | chr1_4:49866677-49866696 | None:intergenic | 35.0% | |
| AAATGCTTTACATGAGTGGA+AGG | - | chr1_4:49866864-49866883 | Msa0167820:intron | 35.0% | |
| ! | ATCATTTTATGGGATAGGAG+AGG | + | chr1_4:49867050-49867069 | None:intergenic | 35.0% |
| ATGGTCCATATATCAAGTGT+AGG | - | chr1_4:49867109-49867128 | Msa0167820:intron | 35.0% | |
| AGATGCCTACACTTGATATA+TGG | + | chr1_4:49867117-49867136 | None:intergenic | 35.0% | |
| GGTGGAACAATTTATGCAAA+TGG | - | chr1_4:49867341-49867360 | Msa0167820:intron | 35.0% | |
| TTCAATCACAATGTCATGTC+AGG | + | chr1_4:49867601-49867620 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGAATATAAGAGCC+TGG | - | chr1_4:49867652-49867671 | Msa0167820:intron | 35.0% |
| ! | TATCTAATGCAGGTTTTTCC+AGG | + | chr1_4:49867673-49867692 | None:intergenic | 35.0% |
| TGGAAAAACCTGCATTAGAT+AGG | - | chr1_4:49867672-49867691 | Msa0167820:intron | 35.0% | |
| ! | TAGTCGTGGATTTTCTACTT+AGG | - | chr1_4:49867743-49867762 | Msa0167820:intron | 35.0% |
| !! | GATCAAACTTAGTTCTGTAC+AGG | + | chr1_4:49867852-49867871 | None:intergenic | 35.0% |
| ! | TGTTTACAGTTTGCGGTTTT+TGG | - | chr1_4:49867891-49867910 | Msa0167820:intron | 35.0% |
| TCCTTGAAAATGGAATCCGA+AGG | - | chr1_4:49864865-49864884 | Msa0167820:three_prime_UTR | 40.0% | |
| ! | ACCTTCGGATTCCATTTTCA+AGG | + | chr1_4:49864869-49864888 | None:intergenic | 40.0% |
| !! | TTTGGCTCTTCTACTAAGCA+AGG | + | chr1_4:49865025-49865044 | None:intergenic | 40.0% |
| ACGAAGCTCTTCATGAAGTT+TGG | + | chr1_4:49865043-49865062 | None:intergenic | 40.0% | |
| GTTCCATTCTTTGACTATCC+TGG | - | chr1_4:49865104-49865123 | Msa0167820:three_prime_UTR | 40.0% | |
| CTACCTGTTCTTTCAGTACT+TGG | - | chr1_4:49865668-49865687 | Msa0167820:intron | 40.0% | |
| !! | CTACCAAGTACTGAAAGAAC+AGG | + | chr1_4:49865674-49865693 | None:intergenic | 40.0% |
| GTATCCTAAGGATGATAGGA+TGG | - | chr1_4:49865766-49865785 | Msa0167820:intron | 40.0% | |
| GGTCAGGAAAAGCAAAATCA+TGG | - | chr1_4:49865884-49865903 | Msa0167820:intron | 40.0% | |
| ! | TTTTTGTTGGCAGCTTGAAG+CGG | - | chr1_4:49866224-49866243 | Msa0167820:intron | 40.0% |
| AATGAAAAGAGCCTGTCTTC+GGG | + | chr1_4:49866265-49866284 | None:intergenic | 40.0% | |
| TGGGTCACACTCTTATTACT+TGG | + | chr1_4:49866383-49866402 | None:intergenic | 40.0% | |
| ! | ATAAGAGTGTGACTAGGTCT+TGG | - | chr1_4:49866447-49866466 | Msa0167820:intron | 40.0% |
| !! | TGAAACAGGAAGCATTTCAG+AGG | - | chr1_4:49866679-49866698 | Msa0167820:intron | 40.0% |
| ! | TCTTTGATACACGGAGTACT+AGG | - | chr1_4:49866785-49866804 | Msa0167820:intron | 40.0% |
| ! | GAGGGATCATTTTATGGGAT+AGG | + | chr1_4:49867055-49867074 | None:intergenic | 40.0% |
| TGTAGGCATCTTATCTCAAC+AGG | - | chr1_4:49867126-49867145 | Msa0167820:intron | 40.0% | |
| GTAGGCATCTTATCTCAACA+GGG | - | chr1_4:49867127-49867146 | Msa0167820:intron | 40.0% | |
| ! | GATCTCCCATCTGAGATAAA+TGG | + | chr1_4:49867296-49867315 | None:intergenic | 40.0% |
| ! | TCAGATGGGAGATCAGATTT+TGG | - | chr1_4:49867302-49867321 | Msa0167820:CDS | 40.0% |
| TATAGGGGTAAACCGAAGAA+AGG | - | chr1_4:49867505-49867524 | Msa0167820:intron | 40.0% | |
| GACATTGTGATTGAACATGC+TGG | - | chr1_4:49867606-49867625 | Msa0167820:intron | 40.0% | |
| GTAGAAAATCCACGACTACT+AGG | + | chr1_4:49867741-49867760 | None:intergenic | 40.0% | |
| !! | TTACAGTTTGCGGTTTTTGG+TGG | - | chr1_4:49867894-49867913 | Msa0167820:intron | 40.0% |
| !!! | TACAGTTTGCGGTTTTTGGT+GGG | - | chr1_4:49867895-49867914 | Msa0167820:intron | 40.0% |
| AGGAAGCCAACATTGCTGAA+GGG | + | chr1_4:49865005-49865024 | None:intergenic | 45.0% | |
| AAGGAAGCCAACATTGCTGA+AGG | + | chr1_4:49865006-49865025 | None:intergenic | 45.0% | |
| ! | GTGTATTTTGTTCTCGGCAC+AGG | - | chr1_4:49865466-49865485 | Msa0167820:CDS | 45.0% |
| CTCGGCACAGGTTTATGATA+TGG | - | chr1_4:49865478-49865497 | Msa0167820:CDS | 45.0% | |
| AATACATTGCCACACTGTCC+AGG | + | chr1_4:49865524-49865543 | None:intergenic | 45.0% | |
| CAGTGTTCTTTGTTGACGAC+AGG | + | chr1_4:49865565-49865584 | None:intergenic | 45.0% | |
| TACTCACTGTGATACTGTGC+TGG | - | chr1_4:49865938-49865957 | Msa0167820:intron | 45.0% | |
| ACTCACTGTGATACTGTGCT+GGG | - | chr1_4:49865939-49865958 | Msa0167820:intron | 45.0% | |
| GAAAATCAGAAACACACCGC+TGG | + | chr1_4:49866304-49866323 | None:intergenic | 45.0% | |
| GTTGAGTTAAGAGTTTCGCG+TGG | - | chr1_4:49866621-49866640 | Msa0167820:intron | 45.0% | |
| TTTGGTCCTGGTCGATCAAA+AGG | - | chr1_4:49867320-49867339 | Msa0167820:intron | 45.0% | |
| GGTAAACCGAAGAAAGGAAG+AGG | - | chr1_4:49867511-49867530 | Msa0167820:intron | 45.0% | |
| AAGAGATGCGAAGAGAGCAA+GGG | - | chr1_4:49867540-49867559 | Msa0167820:intron | 45.0% | |
| ACCTGCATTAGATAGGCCAT+TGG | - | chr1_4:49867679-49867698 | Msa0167820:intron | 45.0% | |
| ACCAATGGCCTATCTAATGC+AGG | + | chr1_4:49867683-49867702 | None:intergenic | 45.0% | |
| GAGGAATTGCAGAGAACCAA+TGG | + | chr1_4:49867698-49867717 | None:intergenic | 45.0% | |
| !! | ATATTGGCTCCTAGTAGTCG+TGG | - | chr1_4:49867729-49867748 | Msa0167820:intron | 45.0% |
| ! | AATCCAGAGTACCACTACCT+TGG | - | chr1_4:49867918-49867937 | Msa0167820:intron | 45.0% |
| ! | TTTCCAAGGTAGTGGTACTC+TGG | + | chr1_4:49867924-49867943 | None:intergenic | 45.0% |
| !! | TCAAATAAAAAATTAATAAA+AGG | + | chr1_4:49865197-49865216 | None:intergenic | 5.0% |
| !! | TAAAAATATATAGTTATTTA+TGG | - | chr1_4:49866116-49866135 | Msa0167820:intron | 5.0% |
| GGTGAACCCTTCAGCAATGT+TGG | - | chr1_4:49864996-49865015 | Msa0167820:three_prime_UTR | 50.0% | |
| !! | CAGAAGTGTCAGTGCTACAG+AGG | - | chr1_4:49865328-49865347 | Msa0167820:intron | 50.0% |
| TTACAGGATCCTGGACAGTG+TGG | - | chr1_4:49865512-49865531 | Msa0167820:intron | 50.0% | |
| GAAAGTTTCAGCCCGAAGAC+AGG | - | chr1_4:49866251-49866270 | Msa0167820:intron | 50.0% | |
| !! | GGGAGATCAGATTTTGGTCC+TGG | - | chr1_4:49867308-49867327 | Msa0167820:CDS | 50.0% |
| ! | GTTCCACCTTTTGATCGACC+AGG | + | chr1_4:49867329-49867348 | None:intergenic | 50.0% |
| CTTGCTCTCTTCGCATCTCT+TGG | + | chr1_4:49867541-49867560 | None:intergenic | 50.0% | |
| CAAGAGATGCGAAGAGAGCA+AGG | - | chr1_4:49867539-49867558 | Msa0167820:intron | 50.0% | |
| GAAGCACGGACACAACAACG+CGG | - | chr1_4:49865244-49865263 | Msa0167820:CDS | 55.0% | |
| ATCTTCAGTGACCTCGCCAG+CGG | - | chr1_4:49866285-49866304 | Msa0167820:intron | 55.0% | |
| ! | ACACGGAGTACTAGGAACCC+TGG | - | chr1_4:49866793-49866812 | Msa0167820:intron | 55.0% |
| TAGGCAGAAGAGCTTGCAGC+TGG | - | chr1_4:49867189-49867208 | Msa0167820:intron | 55.0% | |
| GGTCCTGGTCGATCAAAAGG+TGG | - | chr1_4:49867323-49867342 | Msa0167820:intron | 55.0% | |
| GGCGCACCTCTTCCTTTCTT+CGG | + | chr1_4:49867520-49867539 | None:intergenic | 55.0% | |
| TCAGAAACACACCGCTGGCG+AGG | + | chr1_4:49866299-49866318 | None:intergenic | 60.0% | |
| GAGCTTGCAGCTGGACGAGA+CGG | - | chr1_4:49867198-49867217 | Msa0167820:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 49864794 | 49868027 | 49864794 | ID=Msa0167820;Name=Msa0167820 |
| chr1_4 | mRNA | 49864794 | 49868027 | 49864794 | ID=Msa0167820-mRNA-1;Parent=Msa0167820;Name=Msa0167820-mRNA-1;_AED=0.26;_eAED=0.26;_QI=80|1|1|1|1|1|7|412|157 |
| chr1_4 | exon | 49864794 | 49865311 | 49864794 | ID=Msa0167820-mRNA-1:exon:14718;Parent=Msa0167820-mRNA-1 |
| chr1_4 | exon | 49865455 | 49865515 | 49865455 | ID=Msa0167820-mRNA-1:exon:14717;Parent=Msa0167820-mRNA-1 |
| chr1_4 | exon | 49865602 | 49865629 | 49865602 | ID=Msa0167820-mRNA-1:exon:14716;Parent=Msa0167820-mRNA-1 |
| chr1_4 | exon | 49866515 | 49866584 | 49866515 | ID=Msa0167820-mRNA-1:exon:14715;Parent=Msa0167820-mRNA-1 |
| chr1_4 | exon | 49867233 | 49867333 | 49867233 | ID=Msa0167820-mRNA-1:exon:14714;Parent=Msa0167820-mRNA-1 |
| chr1_4 | exon | 49867744 | 49867838 | 49867744 | ID=Msa0167820-mRNA-1:exon:14713;Parent=Msa0167820-mRNA-1 |
| chr1_4 | exon | 49867935 | 49868027 | 49867935 | ID=Msa0167820-mRNA-1:exon:14712;Parent=Msa0167820-mRNA-1 |
| chr1_4 | five_prime_UTR | 49867948 | 49868027 | 49867948 | ID=Msa0167820-mRNA-1:five_prime_utr;Parent=Msa0167820-mRNA-1 |
| chr1_4 | CDS | 49867935 | 49867947 | 49867935 | ID=Msa0167820-mRNA-1:cds;Parent=Msa0167820-mRNA-1 |
| chr1_4 | CDS | 49867744 | 49867838 | 49867744 | ID=Msa0167820-mRNA-1:cds;Parent=Msa0167820-mRNA-1 |
| chr1_4 | CDS | 49867233 | 49867333 | 49867233 | ID=Msa0167820-mRNA-1:cds;Parent=Msa0167820-mRNA-1 |
| chr1_4 | CDS | 49866515 | 49866584 | 49866515 | ID=Msa0167820-mRNA-1:cds;Parent=Msa0167820-mRNA-1 |
| chr1_4 | CDS | 49865602 | 49865629 | 49865602 | ID=Msa0167820-mRNA-1:cds;Parent=Msa0167820-mRNA-1 |
| chr1_4 | CDS | 49865455 | 49865515 | 49865455 | ID=Msa0167820-mRNA-1:cds;Parent=Msa0167820-mRNA-1 |
| chr1_4 | CDS | 49865206 | 49865311 | 49865206 | ID=Msa0167820-mRNA-1:cds;Parent=Msa0167820-mRNA-1 |
| chr1_4 | three_prime_UTR | 49864794 | 49865205 | 49864794 | ID=Msa0167820-mRNA-1:three_prime_utr;Parent=Msa0167820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
