Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654790 | XP_013457346.1 | 96.743 | 307 | 10 | 0 | 1 | 307 | 1 | 307 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654790 | sp|P51373|YCF23_PORPU | 36.585 | 246 | 154 | 1 | 61 | 304 | 10 | 255 | 3.09e-59 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028940 | Msa0654790 | 0.810342 | 1.208714e-50 | -8.615850e-47 |
| Msa0058140 | Msa0654790 | 0.828982 | 6.642166e-55 | -8.615850e-47 |
| Msa0072910 | Msa0654790 | 0.801459 | 8.915318e-49 | -8.615850e-47 |
| Msa0076100 | Msa0654790 | 0.802594 | 5.209258e-49 | -8.615850e-47 |
| Msa0614020 | Msa0654790 | 0.824658 | 7.164662e-54 | -8.615850e-47 |
| Msa0616000 | Msa0654790 | 0.814228 | 1.714579e-51 | -8.615850e-47 |
| Msa0625900 | Msa0654790 | 0.809273 | 2.053043e-50 | -8.615850e-47 |
| Msa0629820 | Msa0654790 | 0.800233 | 1.586444e-48 | -8.615850e-47 |
| Msa0653090 | Msa0654790 | 0.800815 | 1.207493e-48 | -8.615850e-47 |
| Msa0654790 | Msa0655150 | 0.816175 | 6.333283e-52 | -8.615850e-47 |
| Msa0654790 | Msa0655360 | 0.807782 | 4.271524e-50 | -8.615850e-47 |
| Msa0654790 | Msa0663540 | 0.808679 | 2.750933e-50 | -8.615850e-47 |
| Msa0654790 | Msa0663580 | 0.810473 | 1.132578e-50 | -8.615850e-47 |
| Msa0654790 | Msa0663690 | 0.806815 | 6.848536e-50 | -8.615850e-47 |
| Msa0654790 | Msa0685810 | 0.818623 | 1.779290e-52 | -8.615850e-47 |
| Msa0654790 | Msa0685860 | 0.809706 | 1.657356e-50 | -8.615850e-47 |
| Msa0654790 | Msa0687620 | 0.822043 | 2.924922e-53 | -8.615850e-47 |
| Msa0654790 | Msa0704790 | 0.804409 | 2.190343e-49 | -8.615850e-47 |
| Msa0654790 | Msa0708450 | 0.801810 | 7.553654e-49 | -8.615850e-47 |
| Msa0654790 | Msa0713570 | 0.807167 | 5.769837e-50 | -8.615850e-47 |
| Msa0654790 | Msa0717540 | 0.835610 | 1.517841e-56 | -8.615850e-47 |
| Msa0654790 | Msa0738460 | 0.816347 | 5.796297e-52 | -8.615850e-47 |
| Msa0654790 | Msa0744690 | 0.808545 | 2.938440e-50 | -8.615850e-47 |
| Msa0654790 | Msa0745270 | 0.808389 | 3.172848e-50 | -8.615850e-47 |
| Msa0654790 | Msa0753040 | 0.810109 | 1.357274e-50 | -8.615850e-47 |
| Msa0654790 | Msa0754020 | 0.801039 | 1.086449e-48 | -8.615850e-47 |
| Msa0654790 | Msa0755550 | 0.806998 | 6.265164e-50 | -8.615850e-47 |
| Msa0654790 | Msa0758880 | 0.805246 | 1.464301e-49 | -8.615850e-47 |
| Msa0654790 | Msa0767040 | 0.801365 | 9.319893e-49 | -8.615850e-47 |
| Msa0654790 | Msa0779790 | 0.807077 | 6.028527e-50 | -8.615850e-47 |
| Msa0654790 | Msa0781030 | 0.802151 | 6.429044e-49 | -8.615850e-47 |
| Msa0654790 | Msa0797180 | 0.818113 | 2.322107e-52 | -8.615850e-47 |
| Msa0654790 | Msa0805320 | 0.806029 | 1.002897e-49 | -8.615850e-47 |
| Msa0654790 | Msa0807850 | 0.804608 | 1.990857e-49 | -8.615850e-47 |
| Msa0654790 | Msa0817880 | 0.820233 | 7.642598e-53 | -8.615850e-47 |
| Msa0654790 | Msa0835050 | 0.801418 | 9.091040e-49 | -8.615850e-47 |
| Msa0654790 | Msa0840450 | 0.818446 | 1.952153e-52 | -8.615850e-47 |
| Msa0654790 | Msa0861400 | 0.822760 | 1.993986e-53 | -8.615850e-47 |
| Msa0654790 | Msa0862960 | 0.803057 | 4.179855e-49 | -8.615850e-47 |
| Msa0654790 | Msa0864530 | 0.807683 | 4.485071e-50 | -8.615850e-47 |
| Msa0654790 | Msa0906180 | 0.803239 | 3.833798e-49 | -8.615850e-47 |
| Msa0654790 | Msa0906840 | 0.801292 | 9.645126e-49 | -8.615850e-47 |
| Msa0654790 | Msa0938150 | 0.801816 | 7.532683e-49 | -8.615850e-47 |
| Msa0654790 | Msa0975440 | 0.800151 | 1.648900e-48 | -8.615850e-47 |
| Msa0654790 | Msa0976000 | 0.832353 | 9.921900e-56 | -8.615850e-47 |
| Msa0654790 | Msa1031420 | 0.815418 | 9.339777e-52 | -8.615850e-47 |
| Msa0654790 | Msa1032760 | 0.843893 | 1.058799e-58 | -8.615850e-47 |
| Msa0654790 | Msa1033250 | 0.812563 | 3.980849e-51 | -8.615850e-47 |
| Msa0654790 | Msa1048670 | 0.812525 | 4.057183e-51 | -8.615850e-47 |
| Msa0654790 | Msa1072850 | 0.818654 | 1.750629e-52 | -8.615850e-47 |
| Msa0654790 | Msa1088000 | 0.802029 | 6.811595e-49 | -8.615850e-47 |
| Msa0654790 | Msa1100450 | 0.816670 | 4.905723e-52 | -8.615850e-47 |
| Msa0654790 | Msa1121290 | 0.810616 | 1.055073e-50 | -8.615850e-47 |
| Msa0654790 | Msa1130850 | 0.813344 | 2.684886e-51 | -8.615850e-47 |
| Msa0654790 | Msa1130910 | 0.829393 | 5.278273e-55 | -8.615850e-47 |
| Msa0654790 | Msa1169600 | 0.808423 | 3.120225e-50 | -8.615850e-47 |
| Msa0654790 | Msa1184100 | 0.808826 | 2.558531e-50 | -8.615850e-47 |
| Msa0654790 | Msa1215790 | 0.814210 | 1.730482e-51 | -8.615850e-47 |
| Msa0654790 | Msa1244380 | 0.826392 | 2.782368e-54 | -8.615850e-47 |
| Msa0654790 | Msa1245650 | 0.835386 | 1.729774e-56 | -8.615850e-47 |
| Msa0654790 | Msa1277270 | 0.807050 | 6.109308e-50 | -8.615850e-47 |
| Msa0654790 | Msa1301610 | 0.806813 | 6.855262e-50 | -8.615850e-47 |
| Msa0654790 | Msa1308430 | 0.801719 | 7.886719e-49 | -8.615850e-47 |
| Msa0654790 | Msa1325270 | 0.821143 | 4.721421e-53 | -8.615850e-47 |
| Msa0654790 | Msa1368150 | 0.808887 | 2.483656e-50 | -8.615850e-47 |
| Msa0654790 | Msa1371540 | 0.807277 | 5.469172e-50 | -8.615850e-47 |
| Msa0654790 | Msa1373570 | 0.814715 | 1.337620e-51 | -8.615850e-47 |
| Msa0654790 | Msa1377980 | 0.812105 | 5.011475e-51 | -8.615850e-47 |
| Msa0654790 | Msa1398150 | 0.805707 | 1.172471e-49 | -8.615850e-47 |
| Msa0654790 | Msa1405990 | 0.816885 | 4.391147e-52 | -8.615850e-47 |
| Msa0654790 | Msa1408280 | 0.810100 | 1.363283e-50 | -8.615850e-47 |
| Msa0654790 | Msa1414280 | 0.800402 | 1.465593e-48 | -8.615850e-47 |
| Msa0654790 | Msa1425510 | 0.807418 | 5.104801e-50 | -8.615850e-47 |
| Msa0654790 | Msa1444070 | 0.811602 | 6.449067e-51 | -8.615850e-47 |
| Msa0654790 | Msa1452800 | 0.806986 | 6.300880e-50 | -8.615850e-47 |
| Msa0654790 | Msa1456620 | 0.823750 | 1.170834e-53 | -8.615850e-47 |
| Msa0124460 | Msa0654790 | 0.818696 | 1.713277e-52 | -8.615850e-47 |
| Msa0127110 | Msa0654790 | 0.805122 | 1.554367e-49 | -8.615850e-47 |
| Msa0130070 | Msa0654790 | 0.816148 | 6.420174e-52 | -8.615850e-47 |
| Msa0133390 | Msa0654790 | 0.808345 | 3.242370e-50 | -8.615850e-47 |
| Msa0138340 | Msa0654790 | 0.806862 | 6.694765e-50 | -8.615850e-47 |
| Msa0147960 | Msa0654790 | 0.805709 | 1.171059e-49 | -8.615850e-47 |
| Msa0163170 | Msa0654790 | 0.815052 | 1.126162e-51 | -8.615850e-47 |
| Msa0168950 | Msa0654790 | 0.807847 | 4.138806e-50 | -8.615850e-47 |
| Msa0176080 | Msa0654790 | 0.813684 | 2.259400e-51 | -8.615850e-47 |
| Msa0184800 | Msa0654790 | 0.802875 | 4.557550e-49 | -8.615850e-47 |
| Msa0185770 | Msa0654790 | 0.816958 | 4.228486e-52 | -8.615850e-47 |
| Msa0207150 | Msa0654790 | 0.843585 | 1.280390e-58 | -8.615850e-47 |
| Msa0215510 | Msa0654790 | 0.814925 | 1.201693e-51 | -8.615850e-47 |
| Msa0219550 | Msa0654790 | 0.801720 | 7.880613e-49 | -8.615850e-47 |
| Msa0370690 | Msa0654790 | 0.822389 | 2.432154e-53 | -8.615850e-47 |
| Msa0377990 | Msa0654790 | 0.800653 | 1.302885e-48 | -8.615850e-47 |
| Msa0383110 | Msa0654790 | 0.805142 | 1.540080e-49 | -8.615850e-47 |
| Msa0388000 | Msa0654790 | 0.834108 | 3.626274e-56 | -8.615850e-47 |
| Msa0425150 | Msa0654790 | 0.829181 | 5.941132e-55 | -8.615850e-47 |
| Msa0428720 | Msa0654790 | 0.809780 | 1.597280e-50 | -8.615850e-47 |
| Msa0450230 | Msa0654790 | 0.818728 | 1.684926e-52 | -8.615850e-47 |
| Msa0239610 | Msa0654790 | 0.808762 | 2.640372e-50 | -8.615850e-47 |
| Msa0246470 | Msa0654790 | 0.838493 | 2.783771e-57 | -8.615850e-47 |
| Msa0246510 | Msa0654790 | 0.822264 | 2.599276e-53 | -8.615850e-47 |
| Msa0255770 | Msa0654790 | 0.806677 | 7.322982e-50 | -8.615850e-47 |
| Msa0265440 | Msa0654790 | 0.819333 | 1.227445e-52 | -8.615850e-47 |
| Msa0270840 | Msa0654790 | 0.804425 | 2.173240e-49 | -8.615850e-47 |
| Msa0274890 | Msa0654790 | 0.802352 | 5.843781e-49 | -8.615850e-47 |
| Msa0281310 | Msa0654790 | 0.815691 | 8.118831e-52 | -8.615850e-47 |
| Msa0298820 | Msa0654790 | 0.828484 | 8.763387e-55 | -8.615850e-47 |
| Msa0323790 | Msa0654790 | 0.819496 | 1.126640e-52 | -8.615850e-47 |
| Msa0333350 | Msa0654790 | 0.836623 | 8.395727e-57 | -8.615850e-47 |
| Msa0334280 | Msa0654790 | 0.811789 | 5.873830e-51 | -8.615850e-47 |
| Msa0358750 | Msa0654790 | 0.850415 | 1.723247e-60 | -8.615850e-47 |
| Msa0498250 | Msa0654790 | 0.805670 | 1.193401e-49 | -8.615850e-47 |
| Msa0510410 | Msa0654790 | 0.809253 | 2.072876e-50 | -8.615850e-47 |
| Msa0511040 | Msa0654790 | 0.806975 | 6.335068e-50 | -8.615850e-47 |
| Msa0524570 | Msa0654790 | 0.806521 | 7.900279e-50 | -8.615850e-47 |
| Msa0527210 | Msa0654790 | 0.809043 | 2.299196e-50 | -8.615850e-47 |
| Msa0527420 | Msa0654790 | 0.810134 | 1.340445e-50 | -8.615850e-47 |
| Msa0538050 | Msa0654790 | 0.803637 | 3.169893e-49 | -8.615850e-47 |
| Msa0548230 | Msa0654790 | 0.815906 | 7.270900e-52 | -8.615850e-47 |
| Msa0550760 | Msa0654790 | 0.818266 | 2.144555e-52 | -8.615850e-47 |
| Msa0558010 | Msa0654790 | 0.805933 | 1.050541e-49 | -8.615850e-47 |
| Msa0559280 | Msa0654790 | 0.874175 | 8.290676e-68 | -8.615850e-47 |
| Msa0559890 | Msa0654790 | 0.808243 | 3.409088e-50 | -8.615850e-47 |
| Msa0561760 | Msa0654790 | 0.815670 | 8.207047e-52 | -8.615850e-47 |
| Msa0562390 | Msa0654790 | 0.817005 | 4.127115e-52 | -8.615850e-47 |
| Msa0562680 | Msa0654790 | 0.829863 | 4.056515e-55 | -8.615850e-47 |
| Msa0567190 | Msa0654790 | 0.835587 | 1.538181e-56 | -8.615850e-47 |
| Msa0568300 | Msa0654790 | 0.815575 | 8.616396e-52 | -8.615850e-47 |
| Msa0570250 | Msa0654790 | 0.816528 | 5.280447e-52 | -8.615850e-47 |
| Msa0570770 | Msa0654790 | 0.817247 | 3.639986e-52 | -8.615850e-47 |
| Msa0572730 | Msa0654790 | 0.809951 | 1.467692e-50 | -8.615850e-47 |
| Msa0572820 | Msa0654790 | 0.801991 | 6.932317e-49 | -8.615850e-47 |
| Msa0578400 | Msa0654790 | 0.821702 | 3.508103e-53 | -8.615850e-47 |
| Msa0585720 | Msa0654790 | 0.811506 | 6.766274e-51 | -8.615850e-47 |
| Msa0585810 | Msa0654790 | 0.816936 | 4.277211e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654790 | MtrunA17_Chr4g0052021 | 96.743 | 307 | 10 | 0 | 1 | 307 | 1 | 307 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 88 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAGGTTGCACCTAATA+AGG | 0.177647 | 4_3:-63155728 | None:intergenic |
| CCTACAAAGTCTGGTGTTCT+TGG | 0.228685 | 4_3:+63157696 | Msa0654790:CDS |
| CTAATAAGGGGTTGTACTTA+TGG | 0.232864 | 4_3:-63155714 | None:intergenic |
| ATCCTTAAGGACAGATTCTT+TGG | 0.242936 | 4_3:-63155812 | None:intergenic |
| AAAGTGATTAATGAGCTATT+TGG | 0.256374 | 4_3:+63158796 | Msa0654790:three_prime_UTR |
| CATAAGTACAACCCCTTATT+AGG | 0.268805 | 4_3:+63155715 | Msa0654790:CDS |
| GGAATAGCTTAAGGTGGTTT+AGG | 0.279304 | 4_3:+63158628 | Msa0654790:three_prime_UTR |
| AAGTGATTAATGAGCTATTT+GGG | 0.283638 | 4_3:+63158797 | Msa0654790:three_prime_UTR |
| GCTATCACTGCTGGAGCTTC+TGG | 0.287273 | 4_3:+63158331 | Msa0654790:CDS |
| TTGTAGTTTGTGTTTCTGTA+TGG | 0.322497 | 4_3:+63158754 | Msa0654790:three_prime_UTR |
| CCTAGCAGTTCTTATATTCA+TGG | 0.325042 | 4_3:-63158687 | None:intergenic |
| TAAAACTTGTGAAGAAAATC+TGG | 0.347239 | 4_3:+63158658 | Msa0654790:three_prime_UTR |
| CCAAGAACACCAGACTTTGT+AGG | 0.348475 | 4_3:-63157696 | None:intergenic |
| TTTGAGGTTGCACCTAATAA+GGG | 0.363381 | 4_3:-63155727 | None:intergenic |
| ACTTCCAGTAGTTCAATATA+TGG | 0.380665 | 4_3:+63158603 | Msa0654790:exon |
| TTGCATTGGCAGGTTGAGAT+TGG | 0.389554 | 4_3:+63157004 | Msa0654790:intron |
| AAGGGGTTGTACTTATGGTT+TGG | 0.402149 | 4_3:-63155709 | None:intergenic |
| TAGAAAGCAAGAAGAAAGGT+TGG | 0.402247 | 4_3:-63155603 | None:intergenic |
| AGAAAGTGTTAGGCATGTTA+AGG | 0.406358 | 4_3:-63155659 | None:intergenic |
| AAATCACTCTTTACCTGCTC+TGG | 0.408496 | 4_3:-63157067 | None:intergenic |
| ATGCTGCATGTAACCTGATC+GGG | 0.408784 | 4_3:-63157515 | None:intergenic |
| AACCAAAGAATCTGTCCTTA+AGG | 0.412479 | 4_3:+63155810 | Msa0654790:CDS |
| TGTTCCAATCCTACAAAGTC+TGG | 0.415836 | 4_3:+63157687 | Msa0654790:CDS |
| ATACCTGTCATGTGTTCATC+CGG | 0.423217 | 4_3:+63158283 | Msa0654790:CDS |
| TAATGCTCTAGTAGTAAAAC+AGG | 0.424552 | 4_3:-63155779 | None:intergenic |
| CCTTCCATATATTGAACTAC+TGG | 0.424565 | 4_3:-63158607 | None:intergenic |
| AAAATATCTGTCTCAAGAAC+AGG | 0.433458 | 4_3:+63155499 | Msa0654790:five_prime_UTR |
| AAGAAGGAGAAGAAAGTGTT+AGG | 0.435183 | 4_3:-63155669 | None:intergenic |
| AACACCAGACTTTGTAGGAT+TGG | 0.437626 | 4_3:-63157691 | None:intergenic |
| TTTAGAGATGAGATTGAAGA+AGG | 0.438632 | 4_3:-63155685 | None:intergenic |
| AGTTGAAGCAGGAGCACTAA+TGG | 0.440355 | 4_3:+63156862 | Msa0654790:CDS |
| ACTGCAGCTGGAAATGTTGT+AGG | 0.442568 | 4_3:-63156842 | None:intergenic |
| GCTTCATACATGCACTACTT+TGG | 0.452554 | 4_3:-63158883 | None:intergenic |
| TATATGGAAGGAATAGCTTA+AGG | 0.467712 | 4_3:+63158619 | Msa0654790:three_prime_UTR |
| CACACTAAGCCTCCCCGATC+AGG | 0.470546 | 4_3:+63157502 | Msa0654790:CDS |
| TGTAGTTTGTGTTTCTGTAT+GGG | 0.471566 | 4_3:+63158755 | Msa0654790:three_prime_UTR |
| GCTTCTAACTTCAGCAATCA+TGG | 0.475487 | 4_3:-63158522 | None:intergenic |
| AGTTGTCACTGCCGCAGAAA+AGG | 0.478390 | 4_3:+63156008 | Msa0654790:CDS |
| TTTCCAGCTGCAGTTGAAGC+AGG | 0.479631 | 4_3:+63156851 | Msa0654790:CDS |
| TATCAGCCTAACTTCTTGTC+CGG | 0.480062 | 4_3:+63156570 | Msa0654790:CDS |
| GCTCCTGCTTCAACTGCAGC+TGG | 0.485920 | 4_3:-63156854 | None:intergenic |
| TTCGTTCGCGAAAATCCTTA+AGG | 0.486671 | 4_3:-63155825 | None:intergenic |
| GCAGAGTCACTTGAACTAGA+AGG | 0.489558 | 4_3:+63157633 | Msa0654790:CDS |
| TGCTTCTTAATGAATGGAGT+TGG | 0.491886 | 4_3:+63158826 | Msa0654790:three_prime_UTR |
| ACAGAAATCTAAAATAGAAA+AGG | 0.492126 | 4_3:-63158726 | None:intergenic |
| ATAGCTAGCTTCACCAACTC+CGG | 0.493148 | 4_3:-63156550 | None:intergenic |
| GCACCTATGGCTATCACTGC+TGG | 0.498606 | 4_3:+63158322 | Msa0654790:CDS |
| TGCTGTGACAGCACTTAGCC+CGG | 0.502968 | 4_3:-63158302 | None:intergenic |
| TGAGTAGAAAGCAAGAAGAA+AGG | 0.506900 | 4_3:-63155607 | None:intergenic |
| AAGTGCTGTCACAGCACCTA+TGG | 0.524433 | 4_3:+63158309 | Msa0654790:CDS |
| GACACACACAACACATGAAG+TGG | 0.527329 | 4_3:+63158574 | Msa0654790:CDS |
| AGGTAGTAGACATGGCTTTG+AGG | 0.531491 | 4_3:-63155743 | None:intergenic |
| AATATACCGGACAAGAAGTT+AGG | 0.532876 | 4_3:-63156576 | None:intergenic |
| TCGCGAACGAACAGCTCTCA+AGG | 0.543908 | 4_3:+63155837 | Msa0654790:CDS |
| GAATATGCAGATGCTAAAGT+TGG | 0.547448 | 4_3:-63158241 | None:intergenic |
| TATAGCATGTGACCCGGAGT+TGG | 0.553762 | 4_3:+63156537 | Msa0654790:CDS |
| TTGTCTGTCTATACAAGAGA+AGG | 0.554531 | 4_3:-63155559 | None:intergenic |
| GCTCCAGCAGTGATAGCCAT+AGG | 0.566389 | 4_3:-63158325 | None:intergenic |
| GAAATCTAAAATAGAAAAGG+AGG | 0.567657 | 4_3:-63158723 | None:intergenic |
| GCAGTTCTTATATTCATGGA+AGG | 0.568358 | 4_3:-63158683 | None:intergenic |
| CATGTGTTGTGTGTGTCGGA+AGG | 0.570659 | 4_3:-63158568 | None:intergenic |
| TGTTCTTGGTTTGATTGAGA+AGG | 0.574982 | 4_3:+63157710 | Msa0654790:CDS |
| AAAATAACAGATAAGATATG+TGG | 0.575238 | 4_3:-63155536 | None:intergenic |
| ACTTCATGTGTTGTGTGTGT+CGG | 0.575403 | 4_3:-63158572 | None:intergenic |
| AATGCTGCATGTAACCTGAT+CGG | 0.576394 | 4_3:-63157516 | None:intergenic |
| TACCTGTCATGTGTTCATCC+GGG | 0.584674 | 4_3:+63158284 | Msa0654790:CDS |
| TAGCTAGCTTCACCAACTCC+GGG | 0.587229 | 4_3:-63156549 | None:intergenic |
| TTGAGGTTGCACCTAATAAG+GGG | 0.592490 | 4_3:-63155726 | None:intergenic |
| CCAGTAGTTCAATATATGGA+AGG | 0.595574 | 4_3:+63158607 | Msa0654790:exon |
| GTGACAGACAAAACCACAGA+TGG | 0.596456 | 4_3:-63157470 | None:intergenic |
| AGCCCGGATGAACACATGAC+AGG | 0.601051 | 4_3:-63158286 | None:intergenic |
| GTAGATATTATTCAAACTGA+GGG | 0.601446 | 4_3:+63157657 | Msa0654790:CDS |
| ATGTGTTGTGTGTGTCGGAA+GGG | 0.601772 | 4_3:-63158567 | None:intergenic |
| ATGGAAGGAATAGCTTAAGG+TGG | 0.605964 | 4_3:+63158622 | Msa0654790:three_prime_UTR |
| CCATGAATATAAGAACTGCT+AGG | 0.612499 | 4_3:+63158687 | Msa0654790:three_prime_UTR |
| GATATTATTCAAACTGAGGG+AGG | 0.612806 | 4_3:+63157660 | Msa0654790:CDS |
| AAGGAGGATACTTCCATCTG+TGG | 0.621807 | 4_3:+63157457 | Msa0654790:CDS |
| TGTAGATATTATTCAAACTG+AGG | 0.622046 | 4_3:+63157656 | Msa0654790:CDS |
| ATTTCCAAATCACAGGGTGT+GGG | 0.629293 | 4_3:+63158467 | Msa0654790:intron |
| CGTCGATATAGCATGTGACC+CGG | 0.645562 | 4_3:+63156531 | Msa0654790:CDS |
| AGTGATTAATGAGCTATTTG+GGG | 0.651115 | 4_3:+63158798 | Msa0654790:three_prime_UTR |
| TCGGGGAGGCTTAGTGTGTG+AGG | 0.656802 | 4_3:-63157497 | None:intergenic |
| GTCTAACAAAAGAGACAAGG+AGG | 0.671548 | 4_3:+63157441 | Msa0654790:CDS |
| TGCTGCATGTAACCTGATCG+GGG | 0.675641 | 4_3:-63157514 | None:intergenic |
| TGAGTCTAACAAAAGAGACA+AGG | 0.682958 | 4_3:+63157438 | Msa0654790:CDS |
| TTCTGCGGCAGTGACAACTG+AGG | 0.690999 | 4_3:-63156004 | None:intergenic |
| AGTTAACAAACTAAATGACG+TGG | 0.729283 | 4_3:+63158496 | Msa0654790:CDS |
| TGCATGTAACCTGATCGGGG+AGG | 0.747094 | 4_3:-63157511 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTACAGTAAAAAAATTATT+GGG | - | chr4_3:63158374-63158393 | None:intergenic | 10.0% |
| !! | ATTTACAGTAAAAAAATTAT+TGG | - | chr4_3:63158375-63158394 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAGATTATCACA+GGG | + | chr4_3:63155953-63155972 | Msa0654790:intron | 15.0% |
| !! | ACAAAATTTACTATAATCAT+AGG | + | chr4_3:63156685-63156704 | Msa0654790:intron | 15.0% |
| !! | ATCTTAATCATTTATAAAGT+TGG | + | chr4_3:63156710-63156729 | Msa0654790:intron | 15.0% |
| !! | ATTTACTATATAATGTTAGT+TGG | - | chr4_3:63158045-63158064 | None:intergenic | 15.0% |
| !!! | ATTAGAATTTTGATGATTTA+AGG | - | chr4_3:63158200-63158219 | None:intergenic | 15.0% |
| !! | AAAATAACAGATAAGATATG+TGG | - | chr4_3:63155539-63155558 | None:intergenic | 20.0% |
| !! | ATGAAAAATGAGATAGAAAT+GGG | - | chr4_3:63155882-63155901 | None:intergenic | 20.0% |
| !! | AATGAAAAATGAGATAGAAA+TGG | - | chr4_3:63155883-63155902 | None:intergenic | 20.0% |
| !!! | TGTGTATGTTGATAAATATT+TGG | + | chr4_3:63155929-63155948 | Msa0654790:intron | 20.0% |
| !!! | CTTTTTTTTAAGATTATCAC+AGG | + | chr4_3:63155952-63155971 | Msa0654790:intron | 20.0% |
| !! | AGAGAAAATCACTTAAAATT+TGG | - | chr4_3:63156396-63156415 | None:intergenic | 20.0% |
| !! | TTAGAAAAACTTGAATATAC+CGG | - | chr4_3:63156592-63156611 | None:intergenic | 20.0% |
| !! | TGTTAAGAACAAATCTTATA+TGG | - | chr4_3:63156979-63156998 | None:intergenic | 20.0% |
| !! | TTCTTAACATTATATTGCAT+TGG | + | chr4_3:63156990-63157009 | Msa0654790:intron | 20.0% |
| !!! | TTATGATTCATTTTATGAGA+AGG | + | chr4_3:63157030-63157049 | Msa0654790:CDS | 20.0% |
| !!! | TATGATTCATTTTATGAGAA+GGG | + | chr4_3:63157031-63157050 | Msa0654790:CDS | 20.0% |
| !! | ATGATAGTCACTAAAATTTA+CGG | + | chr4_3:63157113-63157132 | Msa0654790:intron | 20.0% |
| !! | CAAAATTATTCTGATACTAT+TGG | + | chr4_3:63157554-63157573 | Msa0654790:intron | 20.0% |
| !! | AAAAAATCTTAAACTTTGAC+AGG | + | chr4_3:63157602-63157621 | Msa0654790:intron | 20.0% |
| !! | ATCATTATCTAGCAATTAAA+AGG | - | chr4_3:63158155-63158174 | None:intergenic | 20.0% |
| !! | TTTAATTGCTAGATAATGAT+TGG | + | chr4_3:63158155-63158174 | Msa0654790:intron | 20.0% |
| !!! | AATTTTGATGATTTAAGGAA+GGG | - | chr4_3:63158195-63158214 | None:intergenic | 20.0% |
| !!! | ACAGAAATCTAAAATAGAAA+AGG | - | chr4_3:63158729-63158748 | None:intergenic | 20.0% |
| !! | AAACAGGTTTTTCTTTTCAA+AGG | - | chr4_3:63155766-63155785 | None:intergenic | 25.0% |
| ! | CATACACATTACTACATTTA+TGG | - | chr4_3:63155917-63155936 | None:intergenic | 25.0% |
| !! | ATTTAGAATGATCTTCTGTT+TGG | + | chr4_3:63156329-63156348 | Msa0654790:intron | 25.0% |
| !! | TTTAGAATGATCTTCTGTTT+GGG | + | chr4_3:63156330-63156349 | Msa0654790:intron | 25.0% |
| ! | AAATATCTTGAAGATTCAAG+AGG | - | chr4_3:63156359-63156378 | None:intergenic | 25.0% |
| !!! | TTTTAAGTGATTTTCTCTGA+TGG | + | chr4_3:63156398-63156417 | Msa0654790:intron | 25.0% |
| ! | ATTTACAGTACTCTTAAAAG+AGG | + | chr4_3:63156769-63156788 | Msa0654790:intron | 25.0% |
| !! | ATCAGAATAATTTTGCACTT+TGG | - | chr4_3:63157549-63157568 | None:intergenic | 25.0% |
| ! | TGTAGATATTATTCAAACTG+AGG | + | chr4_3:63157656-63157675 | Msa0654790:CDS | 25.0% |
| ! | GTAGATATTATTCAAACTGA+GGG | + | chr4_3:63157657-63157676 | Msa0654790:CDS | 25.0% |
| ! | TAATGAAAATGTAGGCAATT+AGG | - | chr4_3:63157773-63157792 | None:intergenic | 25.0% |
| ! | ATTTCCAGTAATGAAAATGT+AGG | - | chr4_3:63157781-63157800 | None:intergenic | 25.0% |
| !!! | AACATTGAGTTTTAGATTGA+AGG | - | chr4_3:63158006-63158025 | None:intergenic | 25.0% |
| !!! | GAATTTTGATGATTTAAGGA+AGG | - | chr4_3:63158196-63158215 | None:intergenic | 25.0% |
| !! | TTCTAATCACTGATTATTGT+AGG | + | chr4_3:63158213-63158232 | Msa0654790:intron | 25.0% |
| ! | TAAAACTTGTGAAGAAAATC+TGG | + | chr4_3:63158658-63158677 | Msa0654790:three_prime_UTR | 25.0% |
| !! | GAAATCTAAAATAGAAAAGG+AGG | - | chr4_3:63158726-63158745 | None:intergenic | 25.0% |
| ! | AAAGTGATTAATGAGCTATT+TGG | + | chr4_3:63158796-63158815 | Msa0654790:three_prime_UTR | 25.0% |
| ! | AAGTGATTAATGAGCTATTT+GGG | + | chr4_3:63158797-63158816 | Msa0654790:three_prime_UTR | 25.0% |
| AAAATATCTGTCTCAAGAAC+AGG | + | chr4_3:63155499-63155518 | Msa0654790:five_prime_UTR | 30.0% | |
| TTTAGAGATGAGATTGAAGA+AGG | - | chr4_3:63155688-63155707 | None:intergenic | 30.0% | |
| TAATGCTCTAGTAGTAAAAC+AGG | - | chr4_3:63155782-63155801 | None:intergenic | 30.0% | |
| ! | AATACTAGAGCACTAATCAT+CGG | - | chr4_3:63156079-63156098 | None:intergenic | 30.0% |
| TCTAGAAGCAAATTTCAATC+AGG | + | chr4_3:63156231-63156250 | Msa0654790:intron | 30.0% | |
| GTCTTTAACACTCGTTTATA+TGG | + | chr4_3:63156617-63156636 | Msa0654790:intron | 30.0% | |
| GTTTCTTGACTTAAGCATAT+AGG | + | chr4_3:63156639-63156658 | Msa0654790:intron | 30.0% | |
| !! | TTTTGACTAGAGTATGAACT+TGG | - | chr4_3:63156925-63156944 | None:intergenic | 30.0% |
| TTCATACTCTAGTCAAAAGA+TGG | + | chr4_3:63156927-63156946 | Msa0654790:intron | 30.0% | |
| TCATACTCTAGTCAAAAGAT+GGG | + | chr4_3:63156928-63156947 | Msa0654790:intron | 30.0% | |
| ! | TAACATTATATTGCATTGGC+AGG | + | chr4_3:63156994-63157013 | Msa0654790:intron | 30.0% |
| CTTAAAAGTCATGCAAATGA+TGG | - | chr4_3:63157213-63157232 | None:intergenic | 30.0% | |
| ! | ATTTGCATGACTTTTAAGCT+AGG | + | chr4_3:63157215-63157234 | Msa0654790:intron | 30.0% |
| ATTGACTGACTATGTATACT+AGG | + | chr4_3:63157279-63157298 | Msa0654790:intron | 30.0% | |
| ! | ATTGCCTACATTTTCATTAC+TGG | + | chr4_3:63157774-63157793 | Msa0654790:intron | 30.0% |
| ! | GATTGTGGCAATTTTCAAAA+AGG | + | chr4_3:63157821-63157840 | Msa0654790:intron | 30.0% |
| AACCTACGAACTATTAACAT+AGG | + | chr4_3:63157849-63157868 | Msa0654790:intron | 30.0% | |
| ACCTACGAACTATTAACATA+GGG | + | chr4_3:63157850-63157869 | Msa0654790:intron | 30.0% | |
| TCAAACTATTATCAGCATCT+AGG | - | chr4_3:63157909-63157928 | None:intergenic | 30.0% | |
| ATGAACTTACTATACCTTTC+TGG | + | chr4_3:63158409-63158428 | Msa0654790:intron | 30.0% | |
| !! | ATTGATCATTGACTTCTGTT+CGG | + | chr4_3:63158441-63158460 | Msa0654790:intron | 30.0% |
| AGTTAACAAACTAAATGACG+TGG | + | chr4_3:63158496-63158515 | Msa0654790:CDS | 30.0% | |
| ACTTCCAGTAGTTCAATATA+TGG | + | chr4_3:63158603-63158622 | Msa0654790:exon | 30.0% | |
| TATATGGAAGGAATAGCTTA+AGG | + | chr4_3:63158619-63158638 | Msa0654790:three_prime_UTR | 30.0% | |
| TAGAAAAGGAGGAAAAAAGA+TGG | - | chr4_3:63158715-63158734 | None:intergenic | 30.0% | |
| ! | TTGTAGTTTGTGTTTCTGTA+TGG | + | chr4_3:63158754-63158773 | Msa0654790:three_prime_UTR | 30.0% |
| ! | TGTAGTTTGTGTTTCTGTAT+GGG | + | chr4_3:63158755-63158774 | Msa0654790:three_prime_UTR | 30.0% |
| AGTGATTAATGAGCTATTTG+GGG | + | chr4_3:63158798-63158817 | Msa0654790:three_prime_UTR | 30.0% | |
| ! | GAGTTTTGCTTCTTAATGAA+TGG | + | chr4_3:63158820-63158839 | Msa0654790:three_prime_UTR | 30.0% |
| TTGTCTGTCTATACAAGAGA+AGG | - | chr4_3:63155562-63155581 | None:intergenic | 35.0% | |
| TAGAAAGCAAGAAGAAAGGT+TGG | - | chr4_3:63155606-63155625 | None:intergenic | 35.0% | |
| TGAGTAGAAAGCAAGAAGAA+AGG | - | chr4_3:63155610-63155629 | None:intergenic | 35.0% | |
| !! | AGAAAGTGTTAGGCATGTTA+AGG | - | chr4_3:63155662-63155681 | None:intergenic | 35.0% |
| !! | AAGAAGGAGAAGAAAGTGTT+AGG | - | chr4_3:63155672-63155691 | None:intergenic | 35.0% |
| CTAATAAGGGGTTGTACTTA+TGG | - | chr4_3:63155717-63155736 | None:intergenic | 35.0% | |
| CATAAGTACAACCCCTTATT+AGG | + | chr4_3:63155715-63155734 | Msa0654790:CDS | 35.0% | |
| ! | TTTGAGGTTGCACCTAATAA+GGG | - | chr4_3:63155730-63155749 | None:intergenic | 35.0% |
| ! | CTTTTCAAAGGTAGTAGACA+TGG | - | chr4_3:63155754-63155773 | None:intergenic | 35.0% |
| AACCAAAGAATCTGTCCTTA+AGG | + | chr4_3:63155810-63155829 | Msa0654790:CDS | 35.0% | |
| ATCCTTAAGGACAGATTCTT+TGG | - | chr4_3:63155815-63155834 | None:intergenic | 35.0% | |
| !! | AGATAGAAATGGGTTTTGCA+TGG | - | chr4_3:63155872-63155891 | None:intergenic | 35.0% |
| !! | AGGGTTGCAGAATTTTGATA+AGG | + | chr4_3:63155972-63155991 | Msa0654790:CDS | 35.0% |
| ! | GAAGTAAAGAACCTTTTCTG+CGG | - | chr4_3:63156022-63156041 | None:intergenic | 35.0% |
| ATACATCTGAGGAAGAGAAA+AGG | - | chr4_3:63156272-63156291 | None:intergenic | 35.0% | |
| AATATACCGGACAAGAAGTT+AGG | - | chr4_3:63156579-63156598 | None:intergenic | 35.0% | |
| TGACTTAAGCATATAGGAAC+TGG | + | chr4_3:63156645-63156664 | Msa0654790:intron | 35.0% | |
| ATAGGAACTGGAAAATGCAT+TGG | + | chr4_3:63156657-63156676 | Msa0654790:intron | 35.0% | |
| TATGAACTTGGAACTGATAC+TGG | - | chr4_3:63156913-63156932 | None:intergenic | 35.0% | |
| AAAGTCATGCAAATGATGGT+TGG | - | chr4_3:63157209-63157228 | None:intergenic | 35.0% | |
| TGAGTCTAACAAAAGAGACA+AGG | + | chr4_3:63157438-63157457 | Msa0654790:CDS | 35.0% | |
| GATATTATTCAAACTGAGGG+AGG | + | chr4_3:63157660-63157679 | Msa0654790:CDS | 35.0% | |
| ! | TGTTCTTGGTTTGATTGAGA+AGG | + | chr4_3:63157710-63157729 | Msa0654790:CDS | 35.0% |
| ATGCATCACAACAATGATTG+TGG | + | chr4_3:63157806-63157825 | Msa0654790:intron | 35.0% | |
| TCCCTATGTTAATAGTTCGT+AGG | - | chr4_3:63157854-63157873 | None:intergenic | 35.0% | |
| !! | TTTTAGATTGAAGGTGTGTC+AGG | - | chr4_3:63157997-63158016 | None:intergenic | 35.0% |
| GAATATGCAGATGCTAAAGT+TGG | - | chr4_3:63158244-63158263 | None:intergenic | 35.0% | |
| AGTCAATGATCAATAACTCG+CGG | - | chr4_3:63158435-63158454 | None:intergenic | 35.0% | |
| CCTTCCATATATTGAACTAC+TGG | - | chr4_3:63158610-63158629 | None:intergenic | 35.0% | |
| CCAGTAGTTCAATATATGGA+AGG | + | chr4_3:63158607-63158626 | Msa0654790:exon | 35.0% | |
| GCAGTTCTTATATTCATGGA+AGG | - | chr4_3:63158686-63158705 | None:intergenic | 35.0% | |
| CCTAGCAGTTCTTATATTCA+TGG | - | chr4_3:63158690-63158709 | None:intergenic | 35.0% | |
| CCATGAATATAAGAACTGCT+AGG | + | chr4_3:63158687-63158706 | Msa0654790:three_prime_UTR | 35.0% | |
| TGCTTCTTAATGAATGGAGT+TGG | + | chr4_3:63158826-63158845 | Msa0654790:three_prime_UTR | 35.0% | |
| AAGGGGTTGTACTTATGGTT+TGG | - | chr4_3:63155712-63155731 | None:intergenic | 40.0% | |
| TTGAGGTTGCACCTAATAAG+GGG | - | chr4_3:63155729-63155748 | None:intergenic | 40.0% | |
| !! | CTTTGAGGTTGCACCTAATA+AGG | - | chr4_3:63155731-63155750 | None:intergenic | 40.0% |
| TTCGTTCGCGAAAATCCTTA+AGG | - | chr4_3:63155828-63155847 | None:intergenic | 40.0% | |
| GGAAGAGAAAAGGAGACTTT+AGG | - | chr4_3:63156262-63156281 | None:intergenic | 40.0% | |
| GCTTATCAGCTATACATCTG+AGG | - | chr4_3:63156283-63156302 | None:intergenic | 40.0% | |
| TATCAGCCTAACTTCTTGTC+CGG | + | chr4_3:63156570-63156589 | Msa0654790:CDS | 40.0% | |
| CTTGGAACTGATACTGGAAA+TGG | - | chr4_3:63156907-63156926 | None:intergenic | 40.0% | |
| AAATCACTCTTTACCTGCTC+TGG | - | chr4_3:63157070-63157089 | None:intergenic | 40.0% | |
| AGACTCAGAATCTGTACACA+AGG | - | chr4_3:63157425-63157444 | None:intergenic | 40.0% | |
| GTCTAACAAAAGAGACAAGG+AGG | + | chr4_3:63157441-63157460 | Msa0654790:CDS | 40.0% | |
| AATGCTGCATGTAACCTGAT+CGG | - | chr4_3:63157519-63157538 | None:intergenic | 40.0% | |
| TGTTCCAATCCTACAAAGTC+TGG | + | chr4_3:63157687-63157706 | Msa0654790:CDS | 40.0% | |
| AACACCAGACTTTGTAGGAT+TGG | - | chr4_3:63157694-63157713 | None:intergenic | 40.0% | |
| AGGCAATTAGGAAAAGACAC+AGG | - | chr4_3:63157761-63157780 | None:intergenic | 40.0% | |
| ATACCTGTCATGTGTTCATC+CGG | + | chr4_3:63158283-63158302 | Msa0654790:CDS | 40.0% | |
| TCGGTGTATTTCCAAATCAC+AGG | + | chr4_3:63158460-63158479 | Msa0654790:intron | 40.0% | |
| CGGTGTATTTCCAAATCACA+GGG | + | chr4_3:63158461-63158480 | Msa0654790:intron | 40.0% | |
| TATTTCCAAATCACAGGGTG+TGG | + | chr4_3:63158466-63158485 | Msa0654790:intron | 40.0% | |
| ATTTCCAAATCACAGGGTGT+GGG | + | chr4_3:63158467-63158486 | Msa0654790:intron | 40.0% | |
| GCTTCTAACTTCAGCAATCA+TGG | - | chr4_3:63158525-63158544 | None:intergenic | 40.0% | |
| ACTTCATGTGTTGTGTGTGT+CGG | - | chr4_3:63158575-63158594 | None:intergenic | 40.0% | |
| ATGGAAGGAATAGCTTAAGG+TGG | + | chr4_3:63158622-63158641 | Msa0654790:three_prime_UTR | 40.0% | |
| GGAATAGCTTAAGGTGGTTT+AGG | + | chr4_3:63158628-63158647 | Msa0654790:three_prime_UTR | 40.0% | |
| GCTTCATACATGCACTACTT+TGG | - | chr4_3:63158886-63158905 | None:intergenic | 40.0% | |
| ! | AGGTAGTAGACATGGCTTTG+AGG | - | chr4_3:63155746-63155765 | None:intergenic | 45.0% |
| TTGTCAATGTCGTGCTTGCA+GGG | + | chr4_3:63156496-63156515 | Msa0654790:intron | 45.0% | |
| ! | ATAGCTAGCTTCACCAACTC+CGG | - | chr4_3:63156553-63156572 | None:intergenic | 45.0% |
| ACTGCAGCTGGAAATGTTGT+AGG | - | chr4_3:63156845-63156864 | None:intergenic | 45.0% | |
| !! | AGTTGAAGCAGGAGCACTAA+TGG | + | chr4_3:63156862-63156881 | Msa0654790:CDS | 45.0% |
| ! | TTGCATTGGCAGGTTGAGAT+TGG | + | chr4_3:63157004-63157023 | Msa0654790:intron | 45.0% |
| ! | AGTGACTTTTACTCCAGAGC+AGG | + | chr4_3:63157054-63157073 | Msa0654790:CDS | 45.0% |
| AAGGAGGATACTTCCATCTG+TGG | + | chr4_3:63157457-63157476 | Msa0654790:CDS | 45.0% | |
| GTGACAGACAAAACCACAGA+TGG | - | chr4_3:63157473-63157492 | None:intergenic | 45.0% | |
| ATGCTGCATGTAACCTGATC+GGG | - | chr4_3:63157518-63157537 | None:intergenic | 45.0% | |
| GCAGAGTCACTTGAACTAGA+AGG | + | chr4_3:63157633-63157652 | Msa0654790:CDS | 45.0% | |
| CCAAGAACACCAGACTTTGT+AGG | - | chr4_3:63157699-63157718 | None:intergenic | 45.0% | |
| CCTACAAAGTCTGGTGTTCT+TGG | + | chr4_3:63157696-63157715 | Msa0654790:CDS | 45.0% | |
| TACCTGTCATGTGTTCATCC+GGG | + | chr4_3:63158284-63158303 | Msa0654790:CDS | 45.0% | |
| ATGTGTTGTGTGTGTCGGAA+GGG | - | chr4_3:63158570-63158589 | None:intergenic | 45.0% | |
| GACACACACAACACATGAAG+TGG | + | chr4_3:63158574-63158593 | Msa0654790:CDS | 45.0% | |
| AGTTGTCACTGCCGCAGAAA+AGG | + | chr4_3:63156008-63156027 | Msa0654790:CDS | 50.0% | |
| CTTGTCAATGTCGTGCTTGC+AGG | + | chr4_3:63156495-63156514 | Msa0654790:intron | 50.0% | |
| CGTCGATATAGCATGTGACC+CGG | + | chr4_3:63156531-63156550 | Msa0654790:CDS | 50.0% | |
| TATAGCATGTGACCCGGAGT+TGG | + | chr4_3:63156537-63156556 | Msa0654790:CDS | 50.0% | |
| ! | TAGCTAGCTTCACCAACTCC+GGG | - | chr4_3:63156552-63156571 | None:intergenic | 50.0% |
| TTTCCAGCTGCAGTTGAAGC+AGG | + | chr4_3:63156851-63156870 | Msa0654790:CDS | 50.0% | |
| TGCTGCATGTAACCTGATCG+GGG | - | chr4_3:63157517-63157536 | None:intergenic | 50.0% | |
| ! | AAGTGCTGTCACAGCACCTA+TGG | + | chr4_3:63158309-63158328 | Msa0654790:CDS | 50.0% |
| CTGGAGCTTCTGGTGTAGTA+AGG | + | chr4_3:63158341-63158360 | Msa0654790:intron | 50.0% | |
| TCAATAACTCGCGGCCAGAA+AGG | - | chr4_3:63158426-63158445 | None:intergenic | 50.0% | |
| CATGTGTTGTGTGTGTCGGA+AGG | - | chr4_3:63158571-63158590 | None:intergenic | 50.0% | |
| TCGCGAACGAACAGCTCTCA+AGG | + | chr4_3:63155837-63155856 | Msa0654790:CDS | 55.0% | |
| TTCTGCGGCAGTGACAACTG+AGG | - | chr4_3:63156007-63156026 | None:intergenic | 55.0% | |
| TCAATGTCGTGCTTGCAGGG+AGG | + | chr4_3:63156499-63156518 | Msa0654790:intron | 55.0% | |
| TGCATGTAACCTGATCGGGG+AGG | - | chr4_3:63157514-63157533 | None:intergenic | 55.0% | |
| ! | CTAGGTGCAAGTGTCGCATC+TGG | - | chr4_3:63157891-63157910 | None:intergenic | 55.0% |
| AGCCCGGATGAACACATGAC+AGG | - | chr4_3:63158289-63158308 | None:intergenic | 55.0% | |
| TGCTGTGACAGCACTTAGCC+CGG | - | chr4_3:63158305-63158324 | None:intergenic | 55.0% | |
| GCACCTATGGCTATCACTGC+TGG | + | chr4_3:63158322-63158341 | Msa0654790:CDS | 55.0% | |
| GCTCCAGCAGTGATAGCCAT+AGG | - | chr4_3:63158328-63158347 | None:intergenic | 55.0% | |
| GCTATCACTGCTGGAGCTTC+TGG | + | chr4_3:63158331-63158350 | Msa0654790:CDS | 55.0% | |
| AGAGCCCACACCCTGTGATT+TGG | - | chr4_3:63158474-63158493 | None:intergenic | 55.0% | |
| GCTCCTGCTTCAACTGCAGC+TGG | - | chr4_3:63156857-63156876 | None:intergenic | 60.0% | |
| TCGGGGAGGCTTAGTGTGTG+AGG | - | chr4_3:63157500-63157519 | None:intergenic | 60.0% | |
| CACACTAAGCCTCCCCGATC+AGG | + | chr4_3:63157502-63157521 | Msa0654790:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 63155498 | 63158920 | 63155498 | ID=Msa0654790;Name=Msa0654790 |
| chr4_3 | mRNA | 63155498 | 63158920 | 63155498 | ID=Msa0654790-mRNA-1;Parent=Msa0654790;Name=Msa0654790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=154|1|1|1|1|1|9|307|307 |
| chr4_3 | exon | 63155498 | 63155858 | 63155498 | ID=Msa0654790-mRNA-1:exon:17687;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63155964 | 63156029 | 63155964 | ID=Msa0654790-mRNA-1:exon:17688;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63156517 | 63156591 | 63156517 | ID=Msa0654790-mRNA-1:exon:17689;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63156821 | 63156883 | 63156821 | ID=Msa0654790-mRNA-1:exon:17690;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63157016 | 63157075 | 63157016 | ID=Msa0654790-mRNA-1:exon:17691;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63157434 | 63157523 | 63157434 | ID=Msa0654790-mRNA-1:exon:17692;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63157624 | 63157731 | 63157624 | ID=Msa0654790-mRNA-1:exon:17693;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63158235 | 63158357 | 63158235 | ID=Msa0654790-mRNA-1:exon:17694;Parent=Msa0654790-mRNA-1 |
| chr4_3 | exon | 63158482 | 63158920 | 63158482 | ID=Msa0654790-mRNA-1:exon:17695;Parent=Msa0654790-mRNA-1 |
| chr4_3 | five_prime_UTR | 63155498 | 63155651 | 63155498 | ID=Msa0654790-mRNA-1:five_prime_utr;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63155652 | 63155858 | 63155652 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63155964 | 63156029 | 63155964 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63156517 | 63156591 | 63156517 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63156821 | 63156883 | 63156821 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63157016 | 63157075 | 63157016 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63157434 | 63157523 | 63157434 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63157624 | 63157731 | 63157624 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63158235 | 63158357 | 63158235 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | CDS | 63158482 | 63158613 | 63158482 | ID=Msa0654790-mRNA-1:cds;Parent=Msa0654790-mRNA-1 |
| chr4_3 | three_prime_UTR | 63158614 | 63158920 | 63158614 | ID=Msa0654790-mRNA-1:three_prime_utr;Parent=Msa0654790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
