AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0511040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0511040 MtrunA17_Chr3g0117381 95.408 392 18 0 1 392 1 392 0.0 778
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0511040 AT3G48200.1 58.747 383 153 5 12 391 13 393 1.47e-147 446

Find 212 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATTATCAACTGGAATT+TGG 0.138933 3_4:-60375789 None:intergenic
ACCGGAAGCTGAATATATTT+TGG 0.147356 3_4:+60376892 Msa0511040:three_prime_UTR
GTTGGAACTGAGACTAAATT+TGG 0.157974 3_4:+60378233 Msa0511040:three_prime_UTR
GCGCGTTGCACTCGGAATTT+TGG 0.181633 3_4:+60378007 Msa0511040:three_prime_UTR
TTTCAGGAGGCTTATTAAAA+AGG 0.197870 3_4:+60375675 Msa0511040:CDS
TCTGTTTACCTAACTATATT+TGG 0.206119 3_4:+60377798 Msa0511040:three_prime_UTR
ATATTGAAACCAATCATTTA+AGG 0.215577 3_4:+60372977 Msa0511040:five_prime_UTR
ACCTCTTGCATATCAATTTC+AGG 0.222027 3_4:+60375659 Msa0511040:CDS
TCTTTACAGCTTCTTGTCTA+TGG 0.232158 3_4:+60374297 Msa0511040:intron
CCTTTCATCCAAAAGCTCTT+TGG 0.234578 3_4:+60377945 Msa0511040:three_prime_UTR
AATCTTGGAAATCGTAGATT+TGG 0.235879 3_4:+60375226 Msa0511040:CDS
GCATTTGCAACTGCTACTTT+TGG 0.240273 3_4:+60376176 Msa0511040:three_prime_UTR
TGAGAATTCCAAAGAGCTTT+TGG 0.244403 3_4:-60377953 None:intergenic
CCAGCTTTCACAAACTAAAA+TGG 0.279547 3_4:+60375840 Msa0511040:three_prime_UTR
ACATAGATTTGATGAATTAA+TGG 0.287734 3_4:-60373015 None:intergenic
TACTCATTATCCTCAAATTT+AGG 0.291228 3_4:+60377191 Msa0511040:three_prime_UTR
TCCGAGTGCAACGCGCCTAA+TGG 0.304486 3_4:-60378000 None:intergenic
GAATTTGTCAAGCCTGTCTT+TGG 0.308841 3_4:+60375629 Msa0511040:CDS
TCAAGTGTTTATGTACATAT+TGG 0.311721 3_4:+60374486 Msa0511040:CDS
GAGATCGTCTTCTTTCTTGA+TGG 0.312357 3_4:+60376268 Msa0511040:three_prime_UTR
AAAAGCCTTGGATGAAGATT+TGG 0.312960 3_4:+60378712 Msa0511040:three_prime_UTR
TTCTGACCTAACAGCATGTT+TGG 0.316863 3_4:-60376694 None:intergenic
CTATCAGTTGGAATCACATT+TGG 0.317239 3_4:+60377651 Msa0511040:three_prime_UTR
ATCAGATCAGTTTGTACAAA+TGG 0.323840 3_4:+60373813 Msa0511040:CDS
TCCAAAATATATTCAGCTTC+CGG 0.326790 3_4:-60376893 None:intergenic
AGAAAATTAACCGGAGCATT+TGG 0.340698 3_4:-60375454 None:intergenic
TATAGCAGTAGAGGAGATAT+TGG 0.342098 3_4:-60375374 None:intergenic
AAAAGGAATATCTCAAATCT+TGG 0.349222 3_4:-60377259 None:intergenic
TTGGCTGTGCTAGCCATAAC+TGG 0.353860 3_4:+60373910 Msa0511040:CDS
GCATGTGTGCAGCTTGATAA+TGG 0.358192 3_4:+60373789 Msa0511040:intron
GGTTTGAAAGTTGCTTCAAT+TGG 0.359083 3_4:+60378371 Msa0511040:three_prime_UTR
TTCTGACCTCAAAATATTGC+TGG 0.361617 3_4:-60376768 None:intergenic
CAGCTTCTTGTCTATGGTGC+TGG 0.362901 3_4:+60374303 Msa0511040:intron
CTTAACCAACAGTCCAGTTA+TGG 0.363818 3_4:-60373923 None:intergenic
AATGGACATCAAGGACTCTT+TGG 0.370624 3_4:+60373891 Msa0511040:CDS
AAATCGTAGATTTGGGTTCA+TGG 0.372477 3_4:+60375234 Msa0511040:CDS
TCTGAAAAGAATGGAACATA+TGG 0.376978 3_4:+60377223 Msa0511040:three_prime_UTR
TCAAAATTGCAGCTGTGGTC+AGG 0.379377 3_4:-60372873 None:intergenic
AGGTTGCAATAAGGTATATA+TGG 0.380514 3_4:-60378804 None:intergenic
TCTCAAATCTTGGGAATATG+AGG 0.382088 3_4:-60377249 None:intergenic
ATCTTGGAAATCGTAGATTT+GGG 0.383360 3_4:+60375227 Msa0511040:CDS
TTCAATATTTCATAGTTTAG+TGG 0.384537 3_4:-60372953 None:intergenic
TTCCAACACAGTAGCTGAAT+TGG 0.384749 3_4:-60373122 None:intergenic
TGTTCTTAGTGTGTAGTAGT+TGG 0.385267 3_4:-60373066 None:intergenic
ATGGTAGGATCTAGTCCTTT+TGG 0.387134 3_4:+60376634 Msa0511040:three_prime_UTR
TCTTTCACTGAACCTTGTAT+AGG 0.389507 3_4:+60374137 Msa0511040:CDS
ATTATATAGTCATTATTGTA+TGG 0.395634 3_4:-60372928 None:intergenic
TACATCTGAACTGCCACATT+TGG 0.396813 3_4:-60373217 None:intergenic
TACATGCTTTCACAAATATC+AGG 0.397175 3_4:+60377855 Msa0511040:three_prime_UTR
AAGTGTTTGCACTAGCTAGA+TGG 0.398288 3_4:+60376506 Msa0511040:three_prime_UTR
CCAACTAATGCAGAAAATCT+TGG 0.401987 3_4:+60375211 Msa0511040:CDS
CTCTAATAATGTATCAAGTT+GGG 0.402147 3_4:+60378911 Msa0511040:three_prime_UTR
GGTAGTGTGCCTTAAATGAT+TGG 0.402667 3_4:-60372986 None:intergenic
GAATGTTAATGAGTGTCCTT+AGG 0.404462 3_4:+60378949 Msa0511040:three_prime_UTR
AGTAGTAGCTCACACATAAC+TGG 0.405514 3_4:+60373097 Msa0511040:five_prime_UTR
CTAGTGCAAACACTTGAATA+TGG 0.405719 3_4:-60376498 None:intergenic
AATTTCTCTTCCTAAATTTG+AGG 0.406322 3_4:-60377201 None:intergenic
CCTCTATTTGAAGACTTAAG+AGG 0.408672 3_4:+60377822 Msa0511040:three_prime_UTR
CCTTGTATAGGTGAAGGTTT+TGG 0.409343 3_4:+60374149 Msa0511040:CDS
CTTTCTCTTTCCATGTCCAT+TGG 0.410789 3_4:-60377770 None:intergenic
TCTGTAGATGAATTTAGAAC+TGG 0.411150 3_4:-60375148 None:intergenic
AGAAAATATCAATTATCAAC+TGG 0.412606 3_4:-60375796 None:intergenic
TTGATGAATTAATGGTGTTA+AGG 0.413315 3_4:-60373007 None:intergenic
CTCAACACTGACTTCTCCTC+AGG 0.413651 3_4:-60378347 None:intergenic
TTGTGTTTCTTGAATCCATT+AGG 0.415398 3_4:+60377985 Msa0511040:three_prime_UTR
CAAATGTGATTCCAACTGAT+AGG 0.415420 3_4:-60377650 None:intergenic
GGCATTTCCAAGGCCTCTAC+TGG 0.417043 3_4:+60377298 Msa0511040:three_prime_UTR
CACTCCGGTAGTAGGAGTTC+AGG 0.417232 3_4:+60378512 Msa0511040:three_prime_UTR
GAAAATTCATAAAATTCAAC+TGG 0.417707 3_4:-60376544 None:intergenic
AAATTGCAGCTTCAGTTGTA+AGG 0.418193 3_4:+60373338 Msa0511040:CDS
ACTCTAATAATGTATCAAGT+TGG 0.418665 3_4:+60378910 Msa0511040:three_prime_UTR
CAGGTAGTGCTAGAAATAAA+AGG 0.418926 3_4:-60377276 None:intergenic
ACCGGAGTGCATACATCTTT+CGG 0.419434 3_4:-60378498 None:intergenic
CCTACCATGAACAGGCTCAT+AGG 0.420364 3_4:-60376619 None:intergenic
AACGTAACTCGTGATGTTGC+TGG 0.421183 3_4:+60375923 Msa0511040:three_prime_UTR
GAATTAAATTACCTCTGATA+AGG 0.422634 3_4:-60377321 None:intergenic
AGAAGAGAATACATGAGGTT+TGG 0.426975 3_4:-60374360 None:intergenic
CTTACAAATAGATTCCTTGC+TGG 0.431760 3_4:-60376296 None:intergenic
CTAGAAACAAGGTTGCAATA+AGG 0.433828 3_4:-60378813 None:intergenic
ATAGAGGGCCAAATATAGTT+AGG 0.433921 3_4:-60377806 None:intergenic
TTGGAACTGAGACTAAATTT+GGG 0.434015 3_4:+60378234 Msa0511040:three_prime_UTR
TACCATGGTTGAAAAGAGTA+AGG 0.434015 3_4:+60378546 Msa0511040:three_prime_UTR
TCTTGTCTATGGTGCTGGCC+AGG 0.439645 3_4:+60374308 Msa0511040:CDS
TGGCTAGCTGTGATCTTTGG+TGG 0.439839 3_4:+60377145 Msa0511040:three_prime_UTR
CCTCTTAAGTCTTCAAATAG+AGG 0.442245 3_4:-60377822 None:intergenic
GATAAGGCCAGTAGAGGCCT+TGG 0.442786 3_4:-60377305 None:intergenic
ACATCACGAGTTACGTTCTC+TGG 0.447874 3_4:-60375917 None:intergenic
ACAATTCCAAACATGCTGTT+AGG 0.450247 3_4:+60376688 Msa0511040:three_prime_UTR
GACTAGATCCTACCATGAAC+AGG 0.451708 3_4:-60376627 None:intergenic
AAAGGAATATCTCAAATCTT+GGG 0.453642 3_4:-60377258 None:intergenic
TGGACCTATGAGCCTGTTCA+TGG 0.455631 3_4:+60376615 Msa0511040:three_prime_UTR
TTTATAATATTACATTCAAC+CGG 0.455840 3_4:-60378870 None:intergenic
GAGAAGAAGTTACCGCAAAA+TGG 0.456230 3_4:+60378437 Msa0511040:three_prime_UTR
GAATTCTCTCAAAGTTAGCC+AGG 0.461729 3_4:+60375177 Msa0511040:CDS
GTTTGGCTTCAGAATTCTAA+AGG 0.464631 3_4:-60374343 None:intergenic
TGACCACCGACTTACATTGC+AGG 0.469140 3_4:-60374189 None:intergenic
GTTTGAAAGTTGCTTCAATT+GGG 0.476357 3_4:+60378372 Msa0511040:three_prime_UTR
ATAGATAGCATAATAATGAT+TGG 0.476697 3_4:-60378071 None:intergenic
TCCATTAGGCGCGTTGCACT+CGG 0.477295 3_4:+60377999 Msa0511040:three_prime_UTR
AAGAGAAATTCTGAAAAGAA+TGG 0.478719 3_4:+60377214 Msa0511040:three_prime_UTR
TGGTAATAGCTTTACAAGAA+TGG 0.480501 3_4:+60374458 Msa0511040:CDS
GGGCTGACAGCGATAGCAGC+GGG 0.480808 3_4:+60376197 Msa0511040:three_prime_UTR
AGAAACTTGAGTCCCTTGTC+TGG 0.480820 3_4:-60375431 None:intergenic
CGGCCGAGCAATCCTTGTAA+TGG 0.481486 3_4:+60374410 Msa0511040:CDS
CTACTAGTAGTACTACTAGA+TGG 0.481911 3_4:+60378627 Msa0511040:three_prime_UTR
TTGCTTAAGAAAACTAAAAG+TGG 0.483258 3_4:+60375732 Msa0511040:exon
CTAGTAGTACTACTAGTAGA+AGG 0.483798 3_4:-60378623 None:intergenic
TGGCATGCACTCAAAGTCAT+TGG 0.485012 3_4:+60372900 Msa0511040:five_prime_UTR
TGTGAAAGCATGTACTTTGG+AGG 0.487323 3_4:-60377846 None:intergenic
AAATACGGTGCTTCAGTGTA+CGG 0.488022 3_4:+60376721 Msa0511040:three_prime_UTR
GAAAGGTGTATGTCAACATC+AGG 0.489831 3_4:+60375023 Msa0511040:CDS
AATTGTTGCTAAAGCTTTAG+CGG 0.490411 3_4:-60376671 None:intergenic
TTATCCTCTACTGTTCAATA+CGG 0.490473 3_4:+60374390 Msa0511040:CDS
TCAGATCAGTTTGTACAAAT+GGG 0.494155 3_4:+60373814 Msa0511040:CDS
CATGTGTGCAGCTTGATAAT+GGG 0.497527 3_4:+60373790 Msa0511040:intron
ACTCCAACTGCCATTGCTGC+AGG 0.497552 3_4:-60377579 None:intergenic
GAGCTTATAAGAGTAACTCT+TGG 0.498221 3_4:+60377732 Msa0511040:three_prime_UTR
TTGTTCTTGTTCCTATCAGT+TGG 0.500875 3_4:+60377639 Msa0511040:three_prime_UTR
GCACCTGCAGCAATGGCAGT+TGG 0.505912 3_4:+60377576 Msa0511040:three_prime_UTR
GATGTATGCACTCCGGTAGT+AGG 0.507340 3_4:+60378504 Msa0511040:three_prime_UTR
AATTTCTGTTCTGATATAGC+TGG 0.508722 3_4:+60374438 Msa0511040:CDS
ATTTGTGAAAGCATGTACTT+TGG 0.509910 3_4:-60377849 None:intergenic
GCTCACAGATTGCTAATGAA+TGG 0.511184 3_4:+60378291 Msa0511040:three_prime_UTR
ATGAAGGTGAGACATTTCAT+TGG 0.513601 3_4:+60377703 Msa0511040:three_prime_UTR
TTAGGTCAGAATTTGAAATA+CGG 0.518500 3_4:+60376706 Msa0511040:three_prime_UTR
TCAAGTTTCTCCAAATGCTC+CGG 0.520279 3_4:+60375444 Msa0511040:CDS
TGGGCTGACAGCGATAGCAG+CGG 0.520406 3_4:+60376196 Msa0511040:three_prime_UTR
TATCCATTACAAGGATTGCT+CGG 0.525078 3_4:-60374413 None:intergenic
CTTTGTTTCGTTACCAAATG+TGG 0.526160 3_4:+60373204 Msa0511040:CDS
GTCTGCACCAATGGACATCA+AGG 0.527933 3_4:+60373882 Msa0511040:CDS
TGGAAAACTTCTTCAATACA+AGG 0.530011 3_4:+60377671 Msa0511040:three_prime_UTR
AATGTTAATGAGTGTCCTTA+GGG 0.530051 3_4:+60378950 Msa0511040:three_prime_UTR
GGCTTCCAAATCTTCATCCA+AGG 0.530391 3_4:-60378717 None:intergenic
TGCAATAAGGTATATATGGA+TGG 0.532977 3_4:-60378800 None:intergenic
GTACCATAGAGAAAATTAAC+CGG 0.533961 3_4:-60375463 None:intergenic
TTCAGAATTCTAAAGGAAGA+TGG 0.536805 3_4:-60374336 None:intergenic
AGGAGGAGCACCTGCAGCAA+TGG 0.537162 3_4:+60377569 Msa0511040:intron
AGAGTAAGGGAACTTGCAAA+AGG 0.538465 3_4:+60378560 Msa0511040:three_prime_UTR
AACTGAGATTATAGCAGTAG+AGG 0.538849 3_4:-60375383 None:intergenic
AAAGAGTCCTTGATGTCCAT+TGG 0.541604 3_4:-60373889 None:intergenic
CCAAAACCTTCACCTATACA+AGG 0.543677 3_4:-60374149 None:intergenic
GTAAAAGAGGCCAATGGACA+TGG 0.543822 3_4:+60377760 Msa0511040:three_prime_UTR
CACCAATTCAGCTACTGTGT+TGG 0.545695 3_4:+60373120 Msa0511040:five_prime_UTR
TACAAGGAAGTTCATCATGA+AGG 0.547419 3_4:+60377687 Msa0511040:three_prime_UTR
ATCTTCTGTTTCATCGTCTG+AGG 0.548631 3_4:-60377913 None:intergenic
TAATGATCATAACAAGCTAA+AGG 0.549775 3_4:+60375105 Msa0511040:CDS
TGCAAAAGGTAGCTTTAGCA+AGG 0.550035 3_4:+60378574 Msa0511040:three_prime_UTR
TTGCAGTTGAGATCGTTAGC+AGG 0.550202 3_4:-60376220 None:intergenic
CAGTGAAACTAGAACAGTAC+AGG 0.551391 3_4:+60375078 Msa0511040:CDS
AGCACTACCTGGCATTTCCA+AGG 0.555141 3_4:+60377288 Msa0511040:three_prime_UTR
ACTGAACCTTGTATAGGTGA+AGG 0.559292 3_4:+60374143 Msa0511040:CDS
ACTCTTGGACCAGGTAAAAG+AGG 0.569884 3_4:+60377747 Msa0511040:three_prime_UTR
ACCATGGTTGAAAAGAGTAA+GGG 0.570630 3_4:+60378547 Msa0511040:three_prime_UTR
AGCTGCAATTTGAGCAAGAA+CGG 0.571356 3_4:-60373326 None:intergenic
GAGGAACTAGAGCTTCCAAA+AGG 0.572023 3_4:-60376649 None:intergenic
GTAGAGGCCTTGGAAATGCC+AGG 0.572976 3_4:-60377295 None:intergenic
AGTTACATACTCAAGCTTGA+AGG 0.573834 3_4:+60373839 Msa0511040:CDS
GTGCCTCACTTGTAGAACAT+TGG 0.576926 3_4:-60375963 None:intergenic
ACCTCTGATAAGGCCAGTAG+AGG 0.577404 3_4:-60377311 None:intergenic
GAGGTATTGAATCCAAAGAC+AGG 0.579534 3_4:-60375641 None:intergenic
CTGGTGTCTTCATTCATACA+CGG 0.582475 3_4:+60378030 Msa0511040:three_prime_UTR
TCTTGATGGTTGATCCAGCA+AGG 0.586246 3_4:+60376282 Msa0511040:three_prime_UTR
CCTATGAGCCTGTTCATGGT+AGG 0.587322 3_4:+60376619 Msa0511040:three_prime_UTR
GAGGAGAAGTCAGTGTTGAG+AGG 0.588421 3_4:+60378350 Msa0511040:three_prime_UTR
TTGGATTCACAGCATTCCAG+TGG 0.590225 3_4:+60376911 Msa0511040:three_prime_UTR
CTCTTAAGTCTTCAAATAGA+GGG 0.592104 3_4:-60377821 None:intergenic
GCCTCTACTGGCCTTATCAG+AGG 0.593099 3_4:+60377310 Msa0511040:three_prime_UTR
AAGGTAGCTTTAGCAAGGAT+AGG 0.595127 3_4:+60378579 Msa0511040:three_prime_UTR
CTCAAATCTTGGGAATATGA+GGG 0.603748 3_4:-60377248 None:intergenic
TCCTGAAATTGATATGCAAG+AGG 0.603780 3_4:-60375660 None:intergenic
TCAACACTGACTTCTCCTCA+GGG 0.606209 3_4:-60378346 None:intergenic
ATGATCCACAGACAGAAGAA+AGG 0.607328 3_4:+60375006 Msa0511040:intron
TGTACCTGAACTCCTACTAC+CGG 0.607848 3_4:-60378516 None:intergenic
GCTGTAACATATGCTGTTGG+TGG 0.608523 3_4:-60374071 None:intergenic
TCTTCATTCATACACGGTCG+CGG 0.609075 3_4:+60378036 Msa0511040:three_prime_UTR
AATTCTCTCAAAGTTAGCCA+GGG 0.612797 3_4:+60375178 Msa0511040:CDS
ACATACTCAAGCTTGAAGGA+TGG 0.617477 3_4:+60373843 Msa0511040:CDS
TAAAGGAAGATGGTATAACC+TGG 0.619303 3_4:-60374326 None:intergenic
TAGTTGGATGGAGTGAACCC+TGG 0.620354 3_4:-60375195 None:intergenic
AAGTCAATAATAACCAGACA+AGG 0.621302 3_4:+60375418 Msa0511040:CDS
AGTAGTACTACTAGATGGAG+TGG 0.623183 3_4:+60378632 Msa0511040:three_prime_UTR
AGCTTTAGCAAGGATAGGAG+TGG 0.626729 3_4:+60378584 Msa0511040:three_prime_UTR
TGTTGGAAGATAAATGACTC+TGG 0.626740 3_4:+60373137 Msa0511040:exon
GAGGCTGTAACATATGCTGT+TGG 0.626762 3_4:-60374074 None:intergenic
CTTCCAATGTTCTACAAGTG+AGG 0.628990 3_4:+60375960 Msa0511040:three_prime_UTR
TGTGTACTCAACATCACCGC+AGG 0.629479 3_4:-60375566 None:intergenic
GACCAGGTAAAAGAGGCCAA+TGG 0.629804 3_4:+60377754 Msa0511040:three_prime_UTR
CAGCTGTGGTCAGGTTTGCG+CGG 0.629999 3_4:-60372864 None:intergenic
ATGCTTCAAAATTGCAGCTG+TGG 0.630832 3_4:-60372878 None:intergenic
TCTTGCATATCAATTTCAGG+AGG 0.633677 3_4:+60375662 Msa0511040:CDS
TTATCTAAGCACTAGAAACA+AGG 0.639984 3_4:-60378824 None:intergenic
GCCGAAAGATGTATGCACTC+CGG 0.640344 3_4:+60378497 Msa0511040:three_prime_UTR
AGAGCTTGTGAAAGATGTTG+AGG 0.640992 3_4:-60374093 None:intergenic
GATCACAGCTAGCCAAAACA+TGG 0.641056 3_4:-60377137 None:intergenic
TGGTACTCTGAAGAAGTAAG+TGG 0.643169 3_4:-60376748 None:intergenic
ATGCTTTCACAAATATCAGG+TGG 0.649332 3_4:+60377858 Msa0511040:three_prime_UTR
ATAAGAGTAACTCTTGGACC+AGG 0.649401 3_4:+60377738 Msa0511040:three_prime_UTR
TGTTGAGTACACATAGAATG+AGG 0.651000 3_4:+60375576 Msa0511040:CDS
CTCATAGGTCCAGATTCCCA+TGG 0.655768 3_4:-60376604 None:intergenic
TGGATTCACAGCATTCCAGT+GGG 0.656806 3_4:+60376912 Msa0511040:three_prime_UTR
GAAATCACAGAAGAAATGAG+AGG 0.657726 3_4:-60376152 None:intergenic
GCTAGCCATAACTGGACTGT+TGG 0.661377 3_4:+60373918 Msa0511040:CDS
TAACAAGAAGAGAATACATG+AGG 0.664269 3_4:-60374365 None:intergenic
CATCGTCTGAGGCAATAATG+TGG 0.669390 3_4:-60377902 None:intergenic
CAGGTACACCTGATATACCA+TGG 0.670446 3_4:+60378531 Msa0511040:three_prime_UTR
TGTTGCTAAAGCTTTAGCGG+AGG 0.675975 3_4:-60376668 None:intergenic
AGTCAATAATAACCAGACAA+GGG 0.699973 3_4:+60375419 Msa0511040:CDS
AACAAAGCTTCTAGACCCTG+AGG 0.710977 3_4:+60378331 Msa0511040:three_prime_UTR
TCGGCCGTATTGAACAGTAG+AGG 0.711069 3_4:-60374394 None:intergenic
TTCAGATTCTAAGAGACCTG+CGG 0.713920 3_4:+60375550 Msa0511040:intron
TTCAAGTGAGAGAATGCATG+AGG 0.732020 3_4:-60373261 None:intergenic
GAACAATGCTAGAAGCACAG+TGG 0.763671 3_4:-60377622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATAGTCATTATTGTA+TGG - chr3_4:60372931-60372950 None:intergenic 15.0%
!! ATATATTTAGTAATTCACTA+GGG + chr3_4:60374561-60374580 Msa0511040:intron 15.0%
!!! TCATTTTTGTAATTACTATA+AGG + chr3_4:60374593-60374612 Msa0511040:intron 15.0%
!!! ATTTTGAACTAATATTCATA+TGG - chr3_4:60374629-60374648 None:intergenic 15.0%
!! TAATCTGAATTATCTTAAAA+TGG - chr3_4:60374687-60374706 None:intergenic 15.0%
!!! CCTTTTTATAAAAAAAAACA+AGG - chr3_4:60374837-60374856 None:intergenic 15.0%
!!! CCTTGTTTTTTTTTATAAAA+AGG + chr3_4:60374834-60374853 Msa0511040:intron 15.0%
!! ATATATATGAGTGTATTATT+TGG + chr3_4:60376330-60376349 Msa0511040:intron 15.0%
!!! TTGAATTTTATGAATTTTCA+AGG + chr3_4:60376548-60376567 Msa0511040:three_prime_UTR 15.0%
!! ATAAAAAACAAATAATCTGA+TGG - chr3_4:60377092-60377111 None:intergenic 15.0%
!!! TATTTGTTTTTTATTGTAGA+TGG + chr3_4:60377098-60377117 Msa0511040:intron 15.0%
!!! TTTTTTTTTGTATTATGACT+TGG - chr3_4:60378753-60378772 None:intergenic 15.0%
!! TTTATAATATTACATTCAAC+CGG - chr3_4:60378873-60378892 None:intergenic 15.0%
!! TTCAATATTTCATAGTTTAG+TGG - chr3_4:60372956-60372975 None:intergenic 20.0%
!! ATATTGAAACCAATCATTTA+AGG + chr3_4:60372977-60372996 Msa0511040:five_prime_UTR 20.0%
!! ACATAGATTTGATGAATTAA+TGG - chr3_4:60373018-60373037 None:intergenic 20.0%
!! AATTTGATCAAGTATATATG+TGG + chr3_4:60373695-60373714 Msa0511040:intron 20.0%
!! TATATATGTGGAGTTTATTT+CGG + chr3_4:60373707-60373726 Msa0511040:intron 20.0%
!! AAAAGATACTGTTATCAAAA+TGG - chr3_4:60374029-60374048 None:intergenic 20.0%
!!! AGAAATTTTTATCCATTACA+AGG - chr3_4:60374425-60374444 None:intergenic 20.0%
!! GATATATTTAGTAATTCACT+AGG + chr3_4:60374560-60374579 Msa0511040:intron 20.0%
!!! TTTTTGATGTTGTAAAAACT+TGG + chr3_4:60374965-60374984 Msa0511040:intron 20.0%
!! AGAAAATATCAATTATCAAC+TGG - chr3_4:60375799-60375818 None:intergenic 20.0%
!! AAAAAATAACCTTATCAATG+TGG - chr3_4:60376454-60376473 None:intergenic 20.0%
!! GAAAATTCATAAAATTCAAC+TGG - chr3_4:60376547-60376566 None:intergenic 20.0%
!!! ATAATCTTGTTTGTGAAATT+AGG + chr3_4:60376960-60376979 Msa0511040:intron 20.0%
!!! ATGTTCATTTTCATATCAAA+AGG - chr3_4:60376991-60377010 None:intergenic 20.0%
!! ATATGAAAATGAACATGATT+AGG + chr3_4:60376995-60377014 Msa0511040:intron 20.0%
!!! ATTTTTATAGAACCATGTTT+TGG + chr3_4:60377125-60377144 Msa0511040:three_prime_UTR 20.0%
!! ATAGATAGCATAATAATGAT+TGG - chr3_4:60378074-60378093 None:intergenic 20.0%
!!! TGAACCTTTTTCTTAATAAA+AGG - chr3_4:60378134-60378153 None:intergenic 20.0%
!!! AGTTTTTGATCCATTTTTTA+GGG - chr3_4:60378415-60378434 None:intergenic 20.0%
!!! AAGTTTTTGATCCATTTTTT+AGG - chr3_4:60378416-60378435 None:intergenic 20.0%
!! TAAAAAATGGATCAAAAACT+TGG + chr3_4:60378415-60378434 Msa0511040:three_prime_UTR 20.0%
!!! CAATTTTTATATAGTTGAAC+CGG + chr3_4:60378851-60378870 Msa0511040:three_prime_UTR 20.0%
!! TTGATGAATTAATGGTGTTA+AGG - chr3_4:60373010-60373029 None:intergenic 25.0%
!!! TTCATCTTATCTTTTGCTAT+AGG - chr3_4:60373493-60373512 None:intergenic 25.0%
!! TGAAGTCAAATTGTTTTCAT+AGG + chr3_4:60373509-60373528 Msa0511040:intron 25.0%
! TTTACTGACATAAGAGTTTA+CGG - chr3_4:60373598-60373617 None:intergenic 25.0%
! TCAAGTGTTTATGTACATAT+TGG + chr3_4:60374486-60374505 Msa0511040:CDS 25.0%
!! ACTTGCTAGTTTACTTAAAA+AGG - chr3_4:60374742-60374761 None:intergenic 25.0%
!!! CTTATTTTTTTTCGAAAGTC+TGG - chr3_4:60374769-60374788 None:intergenic 25.0%
! TAATGATCATAACAAGCTAA+AGG + chr3_4:60375105-60375124 Msa0511040:CDS 25.0%
! TAACCAAAAAATGATGTGTA+AGG - chr3_4:60375337-60375356 None:intergenic 25.0%
! AAATACAAGCAATCTTTACT+TGG - chr3_4:60375508-60375527 None:intergenic 25.0%
!! TTTACATGCTAACATTTTCA+TGG + chr3_4:60375525-60375544 Msa0511040:intron 25.0%
! TTGCTTAAGAAAACTAAAAG+TGG + chr3_4:60375732-60375751 Msa0511040:exon 25.0%
! ATCAATTATCAACTGGAATT+TGG - chr3_4:60375792-60375811 None:intergenic 25.0%
! ATTATCAATACAAGAACGTA+AGG - chr3_4:60376421-60376440 None:intergenic 25.0%
!! TTAGGTCAGAATTTGAAATA+CGG + chr3_4:60376706-60376725 Msa0511040:three_prime_UTR 25.0%
!!! TTCATATTTTTACTCTGCAA+AGG - chr3_4:60376872-60376891 None:intergenic 25.0%
! TCATTCATTATGTAAACAGA+AGG - chr3_4:60377057-60377076 None:intergenic 25.0%
! TACTCATTATCCTCAAATTT+AGG + chr3_4:60377191-60377210 Msa0511040:three_prime_UTR 25.0%
! AATTTCTCTTCCTAAATTTG+AGG - chr3_4:60377204-60377223 None:intergenic 25.0%
!! AAGAGAAATTCTGAAAAGAA+TGG + chr3_4:60377214-60377233 Msa0511040:three_prime_UTR 25.0%
! AAAGGAATATCTCAAATCTT+GGG - chr3_4:60377261-60377280 None:intergenic 25.0%
! AAAAGGAATATCTCAAATCT+TGG - chr3_4:60377262-60377281 None:intergenic 25.0%
! GAATTAAATTACCTCTGATA+AGG - chr3_4:60377324-60377343 None:intergenic 25.0%
! ATCTGCATAAACAAATCATT+AGG + chr3_4:60377515-60377534 Msa0511040:intron 25.0%
!! ATTTTTCCTATTTGTTTGCA+TGG + chr3_4:60377542-60377561 Msa0511040:intron 25.0%
! TCTGTTTACCTAACTATATT+TGG + chr3_4:60377798-60377817 Msa0511040:three_prime_UTR 25.0%
! CATGAAAAATAGCATAAAAG+AGG - chr3_4:60378099-60378118 None:intergenic 25.0%
!!! CTCTTTTATGCTATTTTTCA+TGG + chr3_4:60378097-60378116 Msa0511040:three_prime_UTR 25.0%
!! GAAGCCTTTTATTAAGAAAA+AGG + chr3_4:60378127-60378146 Msa0511040:three_prime_UTR 25.0%
!! TTGAAGAAAGATTTTTCTGT+TGG + chr3_4:60378215-60378234 Msa0511040:three_prime_UTR 25.0%
! TGTATTTCATCCCTAAAAAA+TGG + chr3_4:60378402-60378421 Msa0511040:three_prime_UTR 25.0%
!!! TTTTTTGTATTATGACTTGG+AGG - chr3_4:60378750-60378769 None:intergenic 25.0%
!! AAAAAAAGGTTAGACTTTTG+TGG + chr3_4:60378772-60378791 Msa0511040:three_prime_UTR 25.0%
! ACTCTAATAATGTATCAAGT+TGG + chr3_4:60378910-60378929 Msa0511040:three_prime_UTR 25.0%
! CTCTAATAATGTATCAAGTT+GGG + chr3_4:60378911-60378930 Msa0511040:three_prime_UTR 25.0%
!!! GTATTTTAACTAATTCCCTA+AGG - chr3_4:60378968-60378987 None:intergenic 25.0%
!!! ACTTTTGAAGTTCTTAACTC+TGG + chr3_4:60373297-60373316 Msa0511040:CDS 30.0%
AAATAAGGGTCTATTTGGAT+TGG - chr3_4:60373635-60373654 None:intergenic 30.0%
CAACAAAATAAGGGTCTATT+TGG - chr3_4:60373640-60373659 None:intergenic 30.0%
CTACAGTCACAACAAAATAA+GGG - chr3_4:60373649-60373668 None:intergenic 30.0%
ATCAGATCAGTTTGTACAAA+TGG + chr3_4:60373813-60373832 Msa0511040:CDS 30.0%
TCAGATCAGTTTGTACAAAT+GGG + chr3_4:60373814-60373833 Msa0511040:CDS 30.0%
CTGATAAAGATGTAAGCAAA+AGG - chr3_4:60373964-60373983 None:intergenic 30.0%
! TTCAGAATTCTAAAGGAAGA+TGG - chr3_4:60374339-60374358 None:intergenic 30.0%
TAACAAGAAGAGAATACATG+AGG - chr3_4:60374368-60374387 None:intergenic 30.0%
TTATCCTCTACTGTTCAATA+CGG + chr3_4:60374390-60374409 Msa0511040:CDS 30.0%
AATTTCTGTTCTGATATAGC+TGG + chr3_4:60374438-60374457 Msa0511040:CDS 30.0%
! TGGTAATAGCTTTACAAGAA+TGG + chr3_4:60374458-60374477 Msa0511040:CDS 30.0%
AATCTAGGCTTTGCATAAAT+AGG - chr3_4:60374865-60374884 None:intergenic 30.0%
CTTATTTCCACCCTAATTAA+GGG + chr3_4:60374892-60374911 Msa0511040:intron 30.0%
!! AAAAACTTGGTTTGCTTCTA+TGG + chr3_4:60374978-60374997 Msa0511040:intron 30.0%
!! CTAATTTGAAGTAGCTTTTC+GGG - chr3_4:60375058-60375077 None:intergenic 30.0%
!! GCTAATTTGAAGTAGCTTTT+CGG - chr3_4:60375059-60375078 None:intergenic 30.0%
! TCTGTAGATGAATTTAGAAC+TGG - chr3_4:60375151-60375170 None:intergenic 30.0%
AATCTTGGAAATCGTAGATT+TGG + chr3_4:60375226-60375245 Msa0511040:CDS 30.0%
ATCTTGGAAATCGTAGATTT+GGG + chr3_4:60375227-60375246 Msa0511040:CDS 30.0%
!!! TCTCCTTACACATCATTTTT+TGG + chr3_4:60375331-60375350 Msa0511040:intron 30.0%
AAGTCAATAATAACCAGACA+AGG + chr3_4:60375418-60375437 Msa0511040:CDS 30.0%
AGTCAATAATAACCAGACAA+GGG + chr3_4:60375419-60375438 Msa0511040:CDS 30.0%
GTACCATAGAGAAAATTAAC+CGG - chr3_4:60375466-60375485 None:intergenic 30.0%
TTTCAGGAGGCTTATTAAAA+AGG + chr3_4:60375675-60375694 Msa0511040:CDS 30.0%
!! TACAAGAACGTAAGGTATTT+TGG - chr3_4:60376413-60376432 None:intergenic 30.0%
!! AATTTTCAAGGCATTTGCAA+TGG + chr3_4:60376560-60376579 Msa0511040:three_prime_UTR 30.0%
! AATTGTTGCTAAAGCTTTAG+CGG - chr3_4:60376674-60376693 None:intergenic 30.0%
GCAGAGTAAAAATATGAAAC+CGG + chr3_4:60376874-60376893 Msa0511040:intron 30.0%
TCCAAAATATATTCAGCTTC+CGG - chr3_4:60376896-60376915 None:intergenic 30.0%
TAGAACACCAGTTAAGAAAT+TGG + chr3_4:60377028-60377047 Msa0511040:intron 30.0%
TCTGAAAAGAATGGAACATA+TGG + chr3_4:60377223-60377242 Msa0511040:three_prime_UTR 30.0%
!! GATTGTATATGGTAATGGTA+AGG - chr3_4:60377462-60377481 None:intergenic 30.0%
GTACAGATTGTATATGGTAA+TGG - chr3_4:60377467-60377486 None:intergenic 30.0%
CAGTTTGTACAGATTGTATA+TGG - chr3_4:60377473-60377492 None:intergenic 30.0%
TGGAAAACTTCTTCAATACA+AGG + chr3_4:60377671-60377690 Msa0511040:three_prime_UTR 30.0%
CTCTTAAGTCTTCAAATAGA+GGG - chr3_4:60377824-60377843 None:intergenic 30.0%
! ATTTGTGAAAGCATGTACTT+TGG - chr3_4:60377852-60377871 None:intergenic 30.0%
TACATGCTTTCACAAATATC+AGG + chr3_4:60377855-60377874 Msa0511040:three_prime_UTR 30.0%
!!! ATAATGTGGTCATTTTGACT+TGG - chr3_4:60377891-60377910 None:intergenic 30.0%
TTGTGTTTCTTGAATCCATT+AGG + chr3_4:60377985-60378004 Msa0511040:three_prime_UTR 30.0%
TTGGAACTGAGACTAAATTT+GGG + chr3_4:60378234-60378253 Msa0511040:three_prime_UTR 30.0%
GTTTGAAAGTTGCTTCAATT+GGG + chr3_4:60378372-60378391 Msa0511040:three_prime_UTR 30.0%
TGCAATAAGGTATATATGGA+TGG - chr3_4:60378803-60378822 None:intergenic 30.0%
AGGTTGCAATAAGGTATATA+TGG - chr3_4:60378807-60378826 None:intergenic 30.0%
TTATCTAAGCACTAGAAACA+AGG - chr3_4:60378827-60378846 None:intergenic 30.0%
AATGTTAATGAGTGTCCTTA+GGG + chr3_4:60378950-60378969 Msa0511040:three_prime_UTR 30.0%
! TGGATTTTTGCATGAAAGAG+AGG - chr3_4:60373049-60373068 None:intergenic 35.0%
TGTTCTTAGTGTGTAGTAGT+TGG - chr3_4:60373069-60373088 None:intergenic 35.0%
TGTTGGAAGATAAATGACTC+TGG + chr3_4:60373137-60373156 Msa0511040:exon 35.0%
! CTTTGTTTCGTTACCAAATG+TGG + chr3_4:60373204-60373223 Msa0511040:CDS 35.0%
AAATTGCAGCTTCAGTTGTA+AGG + chr3_4:60373338-60373357 Msa0511040:CDS 35.0%
TAATGCCCTCACTAGTATTT+CGG + chr3_4:60373402-60373421 Msa0511040:intron 35.0%
GCTACAGTCACAACAAAATA+AGG - chr3_4:60373650-60373669 None:intergenic 35.0%
ATATGTGGAGTTTATTTCGG+AGG + chr3_4:60373710-60373729 Msa0511040:intron 35.0%
TATGTGGAGTTTATTTCGGA+GGG + chr3_4:60373711-60373730 Msa0511040:intron 35.0%
AGTTACATACTCAAGCTTGA+AGG + chr3_4:60373839-60373858 Msa0511040:CDS 35.0%
AGATGTAAGCAAAAGGAATG+AGG - chr3_4:60373957-60373976 None:intergenic 35.0%
TCTTTCACTGAACCTTGTAT+AGG + chr3_4:60374137-60374156 Msa0511040:CDS 35.0%
TCTTTACAGCTTCTTGTCTA+TGG + chr3_4:60374297-60374316 Msa0511040:intron 35.0%
TAAAGGAAGATGGTATAACC+TGG - chr3_4:60374329-60374348 None:intergenic 35.0%
! GTTTGGCTTCAGAATTCTAA+AGG - chr3_4:60374346-60374365 None:intergenic 35.0%
AGAAGAGAATACATGAGGTT+TGG - chr3_4:60374363-60374382 None:intergenic 35.0%
TATCCATTACAAGGATTGCT+CGG - chr3_4:60374416-60374435 None:intergenic 35.0%
AGAAATAACCGTAACATACC+AGG + chr3_4:60374805-60374824 Msa0511040:intron 35.0%
AATTAGGGTGGAAATAAGCT+CGG - chr3_4:60374890-60374909 None:intergenic 35.0%
GCTTATTTCCACCCTAATTA+AGG + chr3_4:60374891-60374910 Msa0511040:intron 35.0%
CAGAGAAACACCCTTAATTA+GGG - chr3_4:60374905-60374924 None:intergenic 35.0%
ACAGAGAAACACCCTTAATT+AGG - chr3_4:60374906-60374925 None:intergenic 35.0%
AATTCTCTCAAAGTTAGCCA+GGG + chr3_4:60375178-60375197 Msa0511040:CDS 35.0%
! GATTTTCTGCATTAGTTGGA+TGG - chr3_4:60375210-60375229 None:intergenic 35.0%
! CCAAGATTTTCTGCATTAGT+TGG - chr3_4:60375214-60375233 None:intergenic 35.0%
CCAACTAATGCAGAAAATCT+TGG + chr3_4:60375211-60375230 Msa0511040:CDS 35.0%
! AAATCGTAGATTTGGGTTCA+TGG + chr3_4:60375234-60375253 Msa0511040:CDS 35.0%
TATAGCAGTAGAGGAGATAT+TGG - chr3_4:60375377-60375396 None:intergenic 35.0%
AACTGAGATTATAGCAGTAG+AGG - chr3_4:60375386-60375405 None:intergenic 35.0%
! AGAAAATTAACCGGAGCATT+TGG - chr3_4:60375457-60375476 None:intergenic 35.0%
TGTTGAGTACACATAGAATG+AGG + chr3_4:60375576-60375595 Msa0511040:CDS 35.0%
ACCTCTTGCATATCAATTTC+AGG + chr3_4:60375659-60375678 Msa0511040:CDS 35.0%
TCCTGAAATTGATATGCAAG+AGG - chr3_4:60375663-60375682 None:intergenic 35.0%
TCTTGCATATCAATTTCAGG+AGG + chr3_4:60375662-60375681 Msa0511040:CDS 35.0%
!!! CCATTTTAGTTTGTGAAAGC+TGG - chr3_4:60375843-60375862 None:intergenic 35.0%
CCAGCTTTCACAAACTAAAA+TGG + chr3_4:60375840-60375859 Msa0511040:three_prime_UTR 35.0%
GAAATCACAGAAGAAATGAG+AGG - chr3_4:60376155-60376174 None:intergenic 35.0%
!!! CATTTGCAACTGCTACTTTT+GGG + chr3_4:60376177-60376196 Msa0511040:three_prime_UTR 35.0%
CTTACAAATAGATTCCTTGC+TGG - chr3_4:60376299-60376318 None:intergenic 35.0%
GAGAGAATACCACATTGATA+AGG + chr3_4:60376442-60376461 Msa0511040:intron 35.0%
CTAGTGCAAACACTTGAATA+TGG - chr3_4:60376501-60376520 None:intergenic 35.0%
ACAATTCCAAACATGCTGTT+AGG + chr3_4:60376688-60376707 Msa0511040:three_prime_UTR 35.0%
!! AGAGTACCAGCAATATTTTG+AGG + chr3_4:60376762-60376781 Msa0511040:three_prime_UTR 35.0%
TTCTGACCTCAAAATATTGC+TGG - chr3_4:60376771-60376790 None:intergenic 35.0%
! ACCGGAAGCTGAATATATTT+TGG + chr3_4:60376892-60376911 Msa0511040:three_prime_UTR 35.0%
TTTCTTAACTGGTGTTCTAG+TGG - chr3_4:60377027-60377046 None:intergenic 35.0%
! AAGGTGTCCAATTTCTTAAC+TGG - chr3_4:60377038-60377057 None:intergenic 35.0%
!! TGTGATCTTTGGTGGTTTTA+TGG + chr3_4:60377153-60377172 Msa0511040:three_prime_UTR 35.0%
CTCAAATCTTGGGAATATGA+GGG - chr3_4:60377251-60377270 None:intergenic 35.0%
TCTCAAATCTTGGGAATATG+AGG - chr3_4:60377252-60377271 None:intergenic 35.0%
CAGGTAGTGCTAGAAATAAA+AGG - chr3_4:60377279-60377298 None:intergenic 35.0%
!!! CTTTTATTTCTAGCACTACC+TGG + chr3_4:60377277-60377296 Msa0511040:three_prime_UTR 35.0%
TTGTTCTTGTTCCTATCAGT+TGG + chr3_4:60377639-60377658 Msa0511040:three_prime_UTR 35.0%
CAAATGTGATTCCAACTGAT+AGG - chr3_4:60377653-60377672 None:intergenic 35.0%
CTATCAGTTGGAATCACATT+TGG + chr3_4:60377651-60377670 Msa0511040:three_prime_UTR 35.0%
TACAAGGAAGTTCATCATGA+AGG + chr3_4:60377687-60377706 Msa0511040:three_prime_UTR 35.0%
ATGAAGGTGAGACATTTCAT+TGG + chr3_4:60377703-60377722 Msa0511040:three_prime_UTR 35.0%
GAGCTTATAAGAGTAACTCT+TGG + chr3_4:60377732-60377751 Msa0511040:three_prime_UTR 35.0%
ATAGAGGGCCAAATATAGTT+AGG - chr3_4:60377809-60377828 None:intergenic 35.0%
CCTCTTAAGTCTTCAAATAG+AGG - chr3_4:60377825-60377844 None:intergenic 35.0%
CCTCTATTTGAAGACTTAAG+AGG + chr3_4:60377822-60377841 Msa0511040:three_prime_UTR 35.0%
ATGCTTTCACAAATATCAGG+TGG + chr3_4:60377858-60377877 Msa0511040:three_prime_UTR 35.0%
! TGAGAATTCCAAAGAGCTTT+TGG - chr3_4:60377956-60377975 None:intergenic 35.0%
GTTGGAACTGAGACTAAATT+TGG + chr3_4:60378233-60378252 Msa0511040:three_prime_UTR 35.0%
GGTTTGAAAGTTGCTTCAAT+TGG + chr3_4:60378371-60378390 Msa0511040:three_prime_UTR 35.0%
! CTTTTCAACCATGGTATATC+AGG - chr3_4:60378542-60378561 None:intergenic 35.0%
TACCATGGTTGAAAAGAGTA+AGG + chr3_4:60378546-60378565 Msa0511040:three_prime_UTR 35.0%
ACCATGGTTGAAAAGAGTAA+GGG + chr3_4:60378547-60378566 Msa0511040:three_prime_UTR 35.0%
CTAGTAGTACTACTAGTAGA+AGG - chr3_4:60378626-60378645 None:intergenic 35.0%
CTACTAGTAGTACTACTAGA+TGG + chr3_4:60378627-60378646 Msa0511040:three_prime_UTR 35.0%
! TACTAGATGGAGTGGTTTTT+GGG + chr3_4:60378640-60378659 Msa0511040:three_prime_UTR 35.0%
!!! TCCAAGGCTTTTTTTGGTTT+TGG - chr3_4:60378704-60378723 None:intergenic 35.0%
!!! TCTTCATCCAAGGCTTTTTT+TGG - chr3_4:60378710-60378729 None:intergenic 35.0%
AAAAGCCTTGGATGAAGATT+TGG + chr3_4:60378712-60378731 Msa0511040:three_prime_UTR 35.0%
! TTATGACTTGGAGGCAAAAA+TGG - chr3_4:60378741-60378760 None:intergenic 35.0%
CTAGAAACAAGGTTGCAATA+AGG - chr3_4:60378816-60378835 None:intergenic 35.0%
GAATGTTAATGAGTGTCCTT+AGG + chr3_4:60378949-60378968 Msa0511040:three_prime_UTR 35.0%
ATGCTTCAAAATTGCAGCTG+TGG - chr3_4:60372881-60372900 None:intergenic 40.0%
!!! ACAGCTGCAATTTTGAAGCA+TGG + chr3_4:60372880-60372899 Msa0511040:five_prime_UTR 40.0%
GGTAGTGTGCCTTAAATGAT+TGG - chr3_4:60372989-60373008 None:intergenic 40.0%
AGTAGTAGCTCACACATAAC+TGG + chr3_4:60373097-60373116 Msa0511040:five_prime_UTR 40.0%
TTCCAACACAGTAGCTGAAT+TGG - chr3_4:60373125-60373144 None:intergenic 40.0%
TACATCTGAACTGCCACATT+TGG - chr3_4:60373220-60373239 None:intergenic 40.0%
TTCAAGTGAGAGAATGCATG+AGG - chr3_4:60373264-60373283 None:intergenic 40.0%
AGCTGCAATTTGAGCAAGAA+CGG - chr3_4:60373329-60373348 None:intergenic 40.0%
TTGTAAGGTTTGTACGTCAC+TGG + chr3_4:60373353-60373372 Msa0511040:intron 40.0%
AATGCCCTCACTAGTATTTC+GGG + chr3_4:60373403-60373422 Msa0511040:intron 40.0%
ACTAGTATTTCGGGCTTCTT+TGG + chr3_4:60373412-60373431 Msa0511040:intron 40.0%
GTGACTGTAGCACATGAATT+TGG + chr3_4:60373659-60373678 Msa0511040:intron 40.0%
ATGTGGAGTTTATTTCGGAG+GGG + chr3_4:60373712-60373731 Msa0511040:intron 40.0%
! CATGTGTGCAGCTTGATAAT+GGG + chr3_4:60373790-60373809 Msa0511040:intron 40.0%
ACATACTCAAGCTTGAAGGA+TGG + chr3_4:60373843-60373862 Msa0511040:CDS 40.0%
!!! ACTTTTGAAGTCTGCACCAA+TGG + chr3_4:60373873-60373892 Msa0511040:CDS 40.0%
AAAGAGTCCTTGATGTCCAT+TGG - chr3_4:60373892-60373911 None:intergenic 40.0%
AATGGACATCAAGGACTCTT+TGG + chr3_4:60373891-60373910 Msa0511040:CDS 40.0%
CTTAACCAACAGTCCAGTTA+TGG - chr3_4:60373926-60373945 None:intergenic 40.0%
AGAGCTTGTGAAAGATGTTG+AGG - chr3_4:60374096-60374115 None:intergenic 40.0%
ACTGAACCTTGTATAGGTGA+AGG + chr3_4:60374143-60374162 Msa0511040:CDS 40.0%
CCAAAACCTTCACCTATACA+AGG - chr3_4:60374152-60374171 None:intergenic 40.0%
! CCTTGTATAGGTGAAGGTTT+TGG + chr3_4:60374149-60374168 Msa0511040:CDS 40.0%
TGAATGCCTGCAATGTAAGT+CGG + chr3_4:60374183-60374202 Msa0511040:intron 40.0%
! GAGTATTGTGTTGCTAACAC+TGG + chr3_4:60374249-60374268 Msa0511040:intron 40.0%
CATCTCGTTGACATATTAGC+TGG + chr3_4:60374656-60374675 Msa0511040:intron 40.0%
TAACCGTAACATACCAGGTT+TGG + chr3_4:60374810-60374829 Msa0511040:intron 40.0%
AACCGTAACATACCAGGTTT+GGG + chr3_4:60374811-60374830 Msa0511040:intron 40.0%
AAAAAAACAAGGCCCAAACC+TGG - chr3_4:60374826-60374845 None:intergenic 40.0%
GAAATAAGCTCGGACAATCT+AGG - chr3_4:60374880-60374899 None:intergenic 40.0%
AGAAACACCCTTAATTAGGG+TGG - chr3_4:60374902-60374921 None:intergenic 40.0%
ATGATCCACAGACAGAAGAA+AGG + chr3_4:60375006-60375025 Msa0511040:intron 40.0%
ATACACCTTTCTTCTGTCTG+TGG - chr3_4:60375014-60375033 None:intergenic 40.0%
! GAAAGGTGTATGTCAACATC+AGG + chr3_4:60375023-60375042 Msa0511040:CDS 40.0%
CAGTGAAACTAGAACAGTAC+AGG + chr3_4:60375078-60375097 Msa0511040:CDS 40.0%
GAATTCTCTCAAAGTTAGCC+AGG + chr3_4:60375177-60375196 Msa0511040:CDS 40.0%
TCAAGTTTCTCCAAATGCTC+CGG + chr3_4:60375444-60375463 Msa0511040:CDS 40.0%
! GCTCCGGTTAATTTTCTCTA+TGG + chr3_4:60375460-60375479 Msa0511040:CDS 40.0%
! TTCAGATTCTAAGAGACCTG+CGG + chr3_4:60375550-60375569 Msa0511040:intron 40.0%
GAATTTGTCAAGCCTGTCTT+TGG + chr3_4:60375629-60375648 Msa0511040:CDS 40.0%
!! GAGGTATTGAATCCAAAGAC+AGG - chr3_4:60375644-60375663 None:intergenic 40.0%
CTTCCAATGTTCTACAAGTG+AGG + chr3_4:60375960-60375979 Msa0511040:three_prime_UTR 40.0%
!!! GCATTTGCAACTGCTACTTT+TGG + chr3_4:60376176-60376195 Msa0511040:three_prime_UTR 40.0%
GAGATCGTCTTCTTTCTTGA+TGG + chr3_4:60376268-60376287 Msa0511040:three_prime_UTR 40.0%
AAGTGTTTGCACTAGCTAGA+TGG + chr3_4:60376506-60376525 Msa0511040:three_prime_UTR 40.0%
TGGCACAGAAAAATAGGGTA+TGG - chr3_4:60376587-60376606 None:intergenic 40.0%
!! TACCCTATTTTTCTGTGCCA+TGG + chr3_4:60376587-60376606 Msa0511040:three_prime_UTR 40.0%
!! ACCCTATTTTTCTGTGCCAT+GGG + chr3_4:60376588-60376607 Msa0511040:three_prime_UTR 40.0%
TCCCATGGCACAGAAAAATA+GGG - chr3_4:60376592-60376611 None:intergenic 40.0%
TTCCCATGGCACAGAAAAAT+AGG - chr3_4:60376593-60376612 None:intergenic 40.0%
! ATGGTAGGATCTAGTCCTTT+TGG + chr3_4:60376634-60376653 Msa0511040:three_prime_UTR 40.0%
TTCTGACCTAACAGCATGTT+TGG - chr3_4:60376697-60376716 None:intergenic 40.0%
AAATACGGTGCTTCAGTGTA+CGG + chr3_4:60376721-60376740 Msa0511040:three_prime_UTR 40.0%
! TGGTACTCTGAAGAAGTAAG+TGG - chr3_4:60376751-60376770 None:intergenic 40.0%
CACATGTATAACTTACCCAC+TGG - chr3_4:60376930-60376949 None:intergenic 40.0%
!! TTTTGGCTAGCTGTGATCTT+TGG + chr3_4:60377142-60377161 Msa0511040:three_prime_UTR 40.0%
TCAAGTGTACATGTCTAGGA+GGG - chr3_4:60377371-60377390 None:intergenic 40.0%
ATGCCCTCAATCCGAATTAT+CGG + chr3_4:60377415-60377434 Msa0511040:intron 40.0%
! TCAACGTTGCACCGATAATT+CGG - chr3_4:60377429-60377448 None:intergenic 40.0%
ACTGTTCCAAACCATTAGTG+TGG + chr3_4:60377489-60377508 Msa0511040:intron 40.0%
GATTCACCACACTAATGGTT+TGG - chr3_4:60377498-60377517 None:intergenic 40.0%
ATGCAGATTCACCACACTAA+TGG - chr3_4:60377503-60377522 None:intergenic 40.0%
ATAAGAGTAACTCTTGGACC+AGG + chr3_4:60377738-60377757 Msa0511040:three_prime_UTR 40.0%
CTTTCTCTTTCCATGTCCAT+TGG - chr3_4:60377773-60377792 None:intergenic 40.0%
! TGTGAAAGCATGTACTTTGG+AGG - chr3_4:60377849-60377868 None:intergenic 40.0%
ATCTTCTGTTTCATCGTCTG+AGG - chr3_4:60377916-60377935 None:intergenic 40.0%
! CCAAAGAGCTTTTGGATGAA+AGG - chr3_4:60377948-60377967 None:intergenic 40.0%
CCTTTCATCCAAAAGCTCTT+TGG + chr3_4:60377945-60377964 Msa0511040:three_prime_UTR 40.0%
CTGGTGTCTTCATTCATACA+CGG + chr3_4:60378030-60378049 Msa0511040:three_prime_UTR 40.0%
GCTCACAGATTGCTAATGAA+TGG + chr3_4:60378291-60378310 Msa0511040:three_prime_UTR 40.0%
GAGAAGAAGTTACCGCAAAA+TGG + chr3_4:60378437-60378456 Msa0511040:three_prime_UTR 40.0%
! TCCCTTACTCTTTTCAACCA+TGG - chr3_4:60378551-60378570 None:intergenic 40.0%
AGAGTAAGGGAACTTGCAAA+AGG + chr3_4:60378560-60378579 Msa0511040:three_prime_UTR 40.0%
!! TGCAAAAGGTAGCTTTAGCA+AGG + chr3_4:60378574-60378593 Msa0511040:three_prime_UTR 40.0%
!! AAGGTAGCTTTAGCAAGGAT+AGG + chr3_4:60378579-60378598 Msa0511040:three_prime_UTR 40.0%
AGTAGTACTACTAGATGGAG+TGG + chr3_4:60378632-60378651 Msa0511040:three_prime_UTR 40.0%
! CTACTAGATGGAGTGGTTTT+TGG + chr3_4:60378639-60378658 Msa0511040:three_prime_UTR 40.0%
! ACTAGATGGAGTGGTTTTTG+GGG + chr3_4:60378641-60378660 Msa0511040:three_prime_UTR 40.0%
!! TTTTGGGGAAACAAGAGAAG+TGG + chr3_4:60378656-60378675 Msa0511040:three_prime_UTR 40.0%
GCCAAAACCAAAAAAAGCCT+TGG + chr3_4:60378700-60378719 Msa0511040:three_prime_UTR 40.0%
TCAAAATTGCAGCTGTGGTC+AGG - chr3_4:60372876-60372895 None:intergenic 45.0%
TGGCATGCACTCAAAGTCAT+TGG + chr3_4:60372900-60372919 Msa0511040:five_prime_UTR 45.0%
CACCAATTCAGCTACTGTGT+TGG + chr3_4:60373120-60373139 Msa0511040:five_prime_UTR 45.0%
GAAGCCCGAAATACTAGTGA+GGG - chr3_4:60373410-60373429 None:intergenic 45.0%
AGAAGCCCGAAATACTAGTG+AGG - chr3_4:60373411-60373430 None:intergenic 45.0%
AGGCTATCTTGACGAGCTTA+TGG + chr3_4:60373529-60373548 Msa0511040:intron 45.0%
GCATGTGTGCAGCTTGATAA+TGG + chr3_4:60373789-60373808 Msa0511040:intron 45.0%
GCTGTAACATATGCTGTTGG+TGG - chr3_4:60374074-60374093 None:intergenic 45.0%
GAGGCTGTAACATATGCTGT+TGG - chr3_4:60374077-60374096 None:intergenic 45.0%
AGAAACTTGAGTCCCTTGTC+TGG - chr3_4:60375434-60375453 None:intergenic 45.0%
ACATCACGAGTTACGTTCTC+TGG - chr3_4:60375920-60375939 None:intergenic 45.0%
AACGTAACTCGTGATGTTGC+TGG + chr3_4:60375923-60375942 Msa0511040:three_prime_UTR 45.0%
GTGCCTCACTTGTAGAACAT+TGG - chr3_4:60375966-60375985 None:intergenic 45.0%
TTGCAGTTGAGATCGTTAGC+AGG - chr3_4:60376223-60376242 None:intergenic 45.0%
! TCTTGATGGTTGATCCAGCA+AGG + chr3_4:60376282-60376301 Msa0511040:three_prime_UTR 45.0%
ATGGCACAGAATTCTCTGCA+TGG - chr3_4:60376482-60376501 None:intergenic 45.0%
! TTTTCTGTGCCATGGGAATC+TGG + chr3_4:60376595-60376614 Msa0511040:three_prime_UTR 45.0%
GACTAGATCCTACCATGAAC+AGG - chr3_4:60376630-60376649 None:intergenic 45.0%
GAGGAACTAGAGCTTCCAAA+AGG - chr3_4:60376652-60376671 None:intergenic 45.0%
! TGTTGCTAAAGCTTTAGCGG+AGG - chr3_4:60376671-60376690 None:intergenic 45.0%
TTGGATTCACAGCATTCCAG+TGG + chr3_4:60376911-60376930 Msa0511040:three_prime_UTR 45.0%
TGGATTCACAGCATTCCAGT+GGG + chr3_4:60376912-60376931 Msa0511040:three_prime_UTR 45.0%
GATCACAGCTAGCCAAAACA+TGG - chr3_4:60377140-60377159 None:intergenic 45.0%
!!! GGTGGTTTTATGGTTCTGCA+TGG + chr3_4:60377163-60377182 Msa0511040:three_prime_UTR 45.0%
GTCAAGTGTACATGTCTAGG+AGG - chr3_4:60377372-60377391 None:intergenic 45.0%
CGTGTCAAGTGTACATGTCT+AGG - chr3_4:60377375-60377394 None:intergenic 45.0%
! TTCGGATTGAGGGCATATCT+GGG - chr3_4:60377411-60377430 None:intergenic 45.0%
! ATTCGGATTGAGGGCATATC+TGG - chr3_4:60377412-60377431 None:intergenic 45.0%
! GCACCGATAATTCGGATTGA+GGG - chr3_4:60377421-60377440 None:intergenic 45.0%
! TGCACCGATAATTCGGATTG+AGG - chr3_4:60377422-60377441 None:intergenic 45.0%
CTGTGGCCATGCAAACAAAT+AGG - chr3_4:60377551-60377570 None:intergenic 45.0%
CTATTTGTTTGCATGGCCAC+AGG + chr3_4:60377549-60377568 Msa0511040:intron 45.0%
! GAACAATGCTAGAAGCACAG+TGG - chr3_4:60377625-60377644 None:intergenic 45.0%
ACTCTTGGACCAGGTAAAAG+AGG + chr3_4:60377747-60377766 Msa0511040:three_prime_UTR 45.0%
GTAAAAGAGGCCAATGGACA+TGG + chr3_4:60377760-60377779 Msa0511040:three_prime_UTR 45.0%
! CATCGTCTGAGGCAATAATG+TGG - chr3_4:60377905-60377924 None:intergenic 45.0%
TCTTCATTCATACACGGTCG+CGG + chr3_4:60378036-60378055 Msa0511040:three_prime_UTR 45.0%
AACAAAGCTTCTAGACCCTG+AGG + chr3_4:60378331-60378350 Msa0511040:three_prime_UTR 45.0%
!! TCAACACTGACTTCTCCTCA+GGG - chr3_4:60378349-60378368 None:intergenic 45.0%
! CTGTTCGCATGACCATTTTG+CGG - chr3_4:60378452-60378471 None:intergenic 45.0%
ACCGGAGTGCATACATCTTT+CGG - chr3_4:60378501-60378520 None:intergenic 45.0%
TGTACCTGAACTCCTACTAC+CGG - chr3_4:60378519-60378538 None:intergenic 45.0%
CAGGTACACCTGATATACCA+TGG + chr3_4:60378531-60378550 Msa0511040:three_prime_UTR 45.0%
! AGCTTTAGCAAGGATAGGAG+TGG + chr3_4:60378584-60378603 Msa0511040:three_prime_UTR 45.0%
GGCTTCCAAATCTTCATCCA+AGG - chr3_4:60378720-60378739 None:intergenic 45.0%
!! TAATACAAAAAAAAAAAAAA+AGG + chr3_4:60378758-60378777 Msa0511040:three_prime_UTR 5.0%
AGTTTATTTCGGAGGGGACG+AGG + chr3_4:60373718-60373737 Msa0511040:intron 50.0%
GTTTATTTCGGAGGGGACGA+GGG + chr3_4:60373719-60373738 Msa0511040:intron 50.0%
TTTATTTCGGAGGGGACGAG+GGG + chr3_4:60373720-60373739 Msa0511040:intron 50.0%
GTCTGCACCAATGGACATCA+AGG + chr3_4:60373882-60373901 Msa0511040:CDS 50.0%
TTGGCTGTGCTAGCCATAAC+TGG + chr3_4:60373910-60373929 Msa0511040:CDS 50.0%
GCTAGCCATAACTGGACTGT+TGG + chr3_4:60373918-60373937 Msa0511040:CDS 50.0%
ATGCCTGCAATGTAAGTCGG+TGG + chr3_4:60374186-60374205 Msa0511040:intron 50.0%
!! TGACCACCGACTTACATTGC+AGG - chr3_4:60374192-60374211 None:intergenic 50.0%
CAGCTTCTTGTCTATGGTGC+TGG + chr3_4:60374303-60374322 Msa0511040:intron 50.0%
TCGGCCGTATTGAACAGTAG+AGG - chr3_4:60374397-60374416 None:intergenic 50.0%
GGCCCAAACCTGGTATGTTA+CGG - chr3_4:60374816-60374835 None:intergenic 50.0%
TAGTTGGATGGAGTGAACCC+TGG - chr3_4:60375198-60375217 None:intergenic 50.0%
TGTGTACTCAACATCACCGC+AGG - chr3_4:60375569-60375588 None:intergenic 50.0%
CTCATAGGTCCAGATTCCCA+TGG - chr3_4:60376607-60376626 None:intergenic 50.0%
TGGACCTATGAGCCTGTTCA+TGG + chr3_4:60376615-60376634 Msa0511040:three_prime_UTR 50.0%
CCTACCATGAACAGGCTCAT+AGG - chr3_4:60376622-60376641 None:intergenic 50.0%
CCTATGAGCCTGTTCATGGT+AGG + chr3_4:60376619-60376638 Msa0511040:three_prime_UTR 50.0%
! TGGCTAGCTGTGATCTTTGG+TGG + chr3_4:60377145-60377164 Msa0511040:three_prime_UTR 50.0%
AGCACTACCTGGCATTTCCA+AGG + chr3_4:60377288-60377307 Msa0511040:three_prime_UTR 50.0%
ACCTCTGATAAGGCCAGTAG+AGG - chr3_4:60377314-60377333 None:intergenic 50.0%
TTTGTTTGCATGGCCACAGG+AGG + chr3_4:60377552-60377571 Msa0511040:intron 50.0%
GACCAGGTAAAAGAGGCCAA+TGG + chr3_4:60377754-60377773 Msa0511040:three_prime_UTR 50.0%
!! GTCCATTGGCCTCTTTTACC+TGG - chr3_4:60377759-60377778 None:intergenic 50.0%
!! GTTGCACTCGGAATTTTGGC+TGG + chr3_4:60378011-60378030 Msa0511040:three_prime_UTR 50.0%
!! CTCAACACTGACTTCTCCTC+AGG - chr3_4:60378350-60378369 None:intergenic 50.0%
! GAGGAGAAGTCAGTGTTGAG+AGG + chr3_4:60378350-60378369 Msa0511040:three_prime_UTR 50.0%
GCCGAAAGATGTATGCACTC+CGG + chr3_4:60378497-60378516 Msa0511040:three_prime_UTR 50.0%
GATGTATGCACTCCGGTAGT+AGG + chr3_4:60378504-60378523 Msa0511040:three_prime_UTR 50.0%
!! TCTTGTCTATGGTGCTGGCC+AGG + chr3_4:60374308-60374327 Msa0511040:CDS 55.0%
CGGCCGAGCAATCCTTGTAA+TGG + chr3_4:60374410-60374429 Msa0511040:CDS 55.0%
GTAGAGGCCTTGGAAATGCC+AGG - chr3_4:60377298-60377317 None:intergenic 55.0%
GGCATTTCCAAGGCCTCTAC+TGG + chr3_4:60377298-60377317 Msa0511040:three_prime_UTR 55.0%
GATAAGGCCAGTAGAGGCCT+TGG - chr3_4:60377308-60377327 None:intergenic 55.0%
!! GCCTCTACTGGCCTTATCAG+AGG + chr3_4:60377310-60377329 Msa0511040:three_prime_UTR 55.0%
ACTCCAACTGCCATTGCTGC+AGG - chr3_4:60377582-60377601 None:intergenic 55.0%
TCCATTAGGCGCGTTGCACT+CGG + chr3_4:60377999-60378018 Msa0511040:three_prime_UTR 55.0%
! GCGCGTTGCACTCGGAATTT+TGG + chr3_4:60378007-60378026 Msa0511040:three_prime_UTR 55.0%
CACTCCGGTAGTAGGAGTTC+AGG + chr3_4:60378512-60378531 Msa0511040:three_prime_UTR 55.0%
CAGCTGTGGTCAGGTTTGCG+CGG - chr3_4:60372867-60372886 None:intergenic 60.0%
TGGGCTGACAGCGATAGCAG+CGG + chr3_4:60376196-60376215 Msa0511040:three_prime_UTR 60.0%
!! AGGAGGAGCACCTGCAGCAA+TGG + chr3_4:60377569-60377588 Msa0511040:intron 60.0%
GCACCTGCAGCAATGGCAGT+TGG + chr3_4:60377576-60377595 Msa0511040:three_prime_UTR 60.0%
TCCGAGTGCAACGCGCCTAA+TGG - chr3_4:60378003-60378022 None:intergenic 60.0%
GGGCTGACAGCGATAGCAGC+GGG + chr3_4:60376197-60376216 Msa0511040:three_prime_UTR 65.0%
TGCTGCAGGTGCTCCTCCTG+TGG - chr3_4:60377568-60377587 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 60372858 60379055 60372858 ID=Msa0511040;Name=Msa0511040
chr3_4 mRNA 60372858 60379055 60372858 ID=Msa0511040-mRNA-1;Parent=Msa0511040;Name=Msa0511040-mRNA-1;_AED=0.08;_eAED=0.08;_QI=292|1|0.91|1|0.90|0.91|12|2470|406
chr3_4 exon 60372858 60373359 60372858 ID=Msa0511040-mRNA-1:exon:14365;Parent=Msa0511040-mRNA-1
chr3_4 exon 60373801 60373939 60373801 ID=Msa0511040-mRNA-1:exon:14366;Parent=Msa0511040-mRNA-1
chr3_4 exon 60374063 60374196 60374063 ID=Msa0511040-mRNA-1:exon:14367;Parent=Msa0511040-mRNA-1
chr3_4 exon 60374306 60374507 60374306 ID=Msa0511040-mRNA-1:exon:14368;Parent=Msa0511040-mRNA-1
chr3_4 exon 60375017 60375255 60375017 ID=Msa0511040-mRNA-1:exon:14369;Parent=Msa0511040-mRNA-1
chr3_4 exon 60375370 60375481 60375370 ID=Msa0511040-mRNA-1:exon:14370;Parent=Msa0511040-mRNA-1
chr3_4 exon 60375555 60375986 60375555 ID=Msa0511040-mRNA-1:exon:14371;Parent=Msa0511040-mRNA-1
chr3_4 exon 60376144 60376313 60376144 ID=Msa0511040-mRNA-1:exon:14372;Parent=Msa0511040-mRNA-1
chr3_4 exon 60376487 60376783 60376487 ID=Msa0511040-mRNA-1:exon:14373;Parent=Msa0511040-mRNA-1
chr3_4 exon 60376878 60376933 60376878 ID=Msa0511040-mRNA-1:exon:14374;Parent=Msa0511040-mRNA-1
chr3_4 exon 60377117 60377331 60377117 ID=Msa0511040-mRNA-1:exon:14375;Parent=Msa0511040-mRNA-1
chr3_4 exon 60377571 60379055 60377571 ID=Msa0511040-mRNA-1:exon:14376;Parent=Msa0511040-mRNA-1
chr3_4 five_prime_UTR 60372858 60373149 60372858 ID=Msa0511040-mRNA-1:five_prime_utr;Parent=Msa0511040-mRNA-1
chr3_4 CDS 60373150 60373359 60373150 ID=Msa0511040-mRNA-1:cds;Parent=Msa0511040-mRNA-1
chr3_4 CDS 60373801 60373939 60373801 ID=Msa0511040-mRNA-1:cds;Parent=Msa0511040-mRNA-1
chr3_4 CDS 60374063 60374196 60374063 ID=Msa0511040-mRNA-1:cds;Parent=Msa0511040-mRNA-1
chr3_4 CDS 60374306 60374507 60374306 ID=Msa0511040-mRNA-1:cds;Parent=Msa0511040-mRNA-1
chr3_4 CDS 60375017 60375255 60375017 ID=Msa0511040-mRNA-1:cds;Parent=Msa0511040-mRNA-1
chr3_4 CDS 60375370 60375481 60375370 ID=Msa0511040-mRNA-1:cds;Parent=Msa0511040-mRNA-1
chr3_4 CDS 60375555 60375739 60375555 ID=Msa0511040-mRNA-1:cds;Parent=Msa0511040-mRNA-1
chr3_4 three_prime_UTR 60375740 60375986 60375740 ID=Msa0511040-mRNA-1:three_prime_utr;Parent=Msa0511040-mRNA-1
chr3_4 three_prime_UTR 60376144 60376313 60376144 ID=Msa0511040-mRNA-1:three_prime_utr;Parent=Msa0511040-mRNA-1
chr3_4 three_prime_UTR 60376487 60376783 60376487 ID=Msa0511040-mRNA-1:three_prime_utr;Parent=Msa0511040-mRNA-1
chr3_4 three_prime_UTR 60376878 60376933 60376878 ID=Msa0511040-mRNA-1:three_prime_utr;Parent=Msa0511040-mRNA-1
chr3_4 three_prime_UTR 60377117 60377331 60377117 ID=Msa0511040-mRNA-1:three_prime_utr;Parent=Msa0511040-mRNA-1
chr3_4 three_prime_UTR 60377571 60379055 60377571 ID=Msa0511040-mRNA-1:three_prime_utr;Parent=Msa0511040-mRNA-1
Gene Sequence

>Msa0511040

ATGACTCTGGTTAGAGTATTACGTTTGTGTATACTATGTTGTGTTTTGTCAACACTTTGTTTCGTTACCAAATGTGGCAGTTCAGATGTAACTGTGAAATTCTTGAAAGCACCTCATGCATTCTCTCACTTGAACTCAGCAACATTTACTTTTGAAGTTCTTAACTCTGGTAGTAACCGTTCTTGCTCAAATTGCAGCTTCAGTTGTAAGCTTGATAATGGGATCAGATCAGTTTGTACAAATGGGAGAGTTACATACTCAAGCTTGAAGGATGGAAATCATACTTTTGAAGTCTGCACCAATGGACATCAAGGACTCTTTGGCTGTGCTAGCCATAACTGGACTGTTGACACAATTCCACCAACAGCATATGTTACAGCCTCAACATCTTTCACAAGCTCTTTAAATGTTTCAGTAAATATATCTTTCACTGAACCTTGTATAGGTGAAGGTTTTGGTTGCAAATCTGTGAATGCCTGCAATCTTCTTGTCTATGGTGCTGGCCAGGTTATACCATCTTCCTTTAGAATTCTGAAGCCAAACCTCATGTATTCTCTTCTTGTTAGTTTATCCTCTACTGTTCAATACGGCCGAGCAATCCTTGTAATGGATAAAAATTTCTGTTCTGATATAGCTGGTAATAGCTTTACAAGAATGGCAAATTCAAGTGTTTATGTACATATTGACAGAAGAAAGGTGTATGTCAACATCAGGACTCATGTACCCGAAAAGCTACTTCAAATTAGCAGTGAAACTAGAACAGTACAGGCAACTAATGATCATAACAAGCTAAAGGTGTATTTGTACTTCTCAGCTCCAGTTCTAAATTCATCTACAGAAATCATGAATTCTCTCAAAGTTAGCCAGGGTTCACTCCATCCAACTAATGCAGAAAATCTTGGAAATCGTAGATTTGGGTTCATGATTGCCAATATCTCCTCTACTGCTATAATCTCAGTTAACTTCAATTCGAAGTCAATAATAACCAGACAAGGGACTCAAGTTTCTCCAAATGCTCCGGTTAATTTTCTCTATGATTCTAAGAGACCTGCGGTGATGTTGAGTACACATAGAATGAGGACAAAAGATCACAATATTCAAATACTAATTGAATTTGTCAAGCCTGTCTTTGGATTCAATACCTCTTGCATATCAATTTCAGGAGGCTTATTAAAAAGGCAAGTATATAAGTACATGTACACTTTCTGTGATATTGCTTAA
Protein sequence

>Msa0511040

MTLVRVLRLCILCCVLSTLCFVTKCGSSDVTVKFLKAPHAFSHLNSATFTFEVLNSGSNRSCSNCSFSCKLDNGIRSVCTNGRVTYSSLKDGNHTFEVCTNGHQGLFGCASHNWTVDTIPPTAYVTASTSFTSSLNVSVNISFTEPCIGEGFGCKSVNACNLLVYGAGQVIPSSFRILKPNLMYSLLVSLSSTVQYGRAILVMDKNFCSDIAGNSFTRMANSSVYVHIDRRKVYVNIRTHVPEKLLQISSETRTVQATNDHNKLKVYLYFSAPVLNSSTEIMNSLKVSQGSLHPTNAENLGNRRFGFMIANISSTAIISVNFNSKSIITRQGTQVSPNAPVNFLYDSKRPAVMLSTHRMRTKDHNIQILIEFVKPVFGFNTSCISISGGLLKRQVYKYMYTFCDIA*