AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0685810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0685810 MtrunA17_Chr4g0034391 93.435 655 24 3 1 650 1 641 0.0 1148
Msa0685810 MtrunA17_Chr4g0064601 34.505 313 163 11 22 322 7 289 9.44e-34 130
Msa0685810 MtrunA17_Chr4g0032081 26.996 263 164 8 75 323 97 345 8.31e-18 87.0
Msa0685810 MtrunA17_Chr8g0338051 31.416 226 118 11 97 304 93 299 4.21e-15 77.0
Msa0685810 MtrunA17_Chr4g0009941 47.297 74 38 1 179 252 107 179 1.61e-13 71.2
Msa0685810 MtrunA17_Chr7g0238901 42.667 75 42 1 179 253 181 254 7.17e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0685810 AT3G18890.1 49.269 684 241 18 9 646 13 636 0.0 536
Msa0685810 AT2G34460.1 35.897 273 141 10 63 325 32 280 2.20e-32 127
Msa0685810 AT3G46780.1 29.889 271 150 10 75 323 89 341 1.66e-14 77.0
Msa0685810 AT4G31530.1 33.152 184 99 10 139 304 122 299 2.53e-13 72.0
Msa0685810 AT4G31530.2 33.152 184 99 10 139 304 122 299 2.63e-13 72.0
Msa0685810 AT2G37660.1 42.353 85 44 3 172 253 168 250 2.76e-12 68.9
Msa0685810 AT5G02240.1 41.975 81 32 2 179 252 105 177 5.67e-12 67.0

Find 216 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGATACTGCATCAATAT+TGG 0.200433 4_4:+50077794 None:intergenic
TCACTGGGAACAAACAAATT+TGG 0.210597 4_4:-50080507 Msa0685810:CDS
ATCATAAGAGCTCAAGTTTC+AGG 0.231625 4_4:-50081744 Msa0685810:intron
GGCACTTCTGCCACTGGTTC+TGG 0.235947 4_4:+50079672 None:intergenic
TGAGAAATGACATCTATTTC+TGG 0.252631 4_4:+50079372 None:intergenic
TGTTGATACTGCATCAATAT+TGG 0.256072 4_4:+50077836 None:intergenic
TGTTGATACTGCATCAATAT+TGG 0.256072 4_4:+50077920 None:intergenic
ACAAAGTATCTTCAGTTGAT+AGG 0.258571 4_4:+50080161 None:intergenic
TGAAAGTACTATAACATAAA+TGG 0.264411 4_4:+50077035 None:intergenic
TTCTTGTCACTAGGCTTAAC+TGG 0.265489 4_4:+50079456 None:intergenic
TTTCATGTTGCCCACTCTTT+AGG 0.274150 4_4:-50077011 Msa0685810:three_prime_UTR
GAAGATGTATTTGGTGCATT+AGG 0.304395 4_4:+50077957 None:intergenic
CTTGATACTGCATCAATATT+GGG 0.311245 4_4:+50077795 None:intergenic
ATTGATGTAGTTGGTGCATT+AGG 0.312719 4_4:+50079065 None:intergenic
AAAAGTCATCAAGAAATAAA+TGG 0.316117 4_4:+50077165 None:intergenic
TGAAATTGTGGAATGTGATT+TGG 0.325323 4_4:-50080805 Msa0685810:CDS
CAAAGTAAATCACTTCATAT+TGG 0.327885 4_4:-50080535 Msa0685810:CDS
GAACACACAGAAGATGTATT+TGG 0.352233 4_4:+50077948 None:intergenic
GAACAGATTGGATCAGCATT+AGG 0.355288 4_4:-50080774 Msa0685810:CDS
ACTTGATACTTCCTCAATCT+TGG 0.357838 4_4:+50079016 None:intergenic
GTTAAACAATTGAAGCTTGA+TGG 0.358751 4_4:-50080938 Msa0685810:CDS
AATGCTGATCCAATCTGTTC+TGG 0.362020 4_4:+50080777 None:intergenic
GTGGTCTTGACTTTGGTTCA+TGG 0.366970 4_4:+50077715 None:intergenic
CTTTCACCACAACACCTTCC+AGG 0.367198 4_4:-50081785 Msa0685810:CDS
CACCTCACTCACAGAAGATA+TGG 0.369750 4_4:+50077860 None:intergenic
CTACTGACAGCTGCAGTATC+TGG 0.372433 4_4:+50079762 None:intergenic
TCAACTGAAGATACTTTGTT+TGG 0.379248 4_4:-50080157 Msa0685810:CDS
AATCTGGCTTACGCAGTATA+AGG 0.381547 4_4:+50079588 None:intergenic
CCTCCATTGGTATGGCTTGA+AGG 0.382049 4_4:+50081922 None:intergenic
GAGAGCTGGTGCATTGGTTC+AGG 0.386003 4_4:-50081387 Msa0685810:intron
CTTCATATTGGTTACTTCAC+TGG 0.386091 4_4:-50080523 Msa0685810:CDS
GTTGATACTGCATCAATATT+GGG 0.387116 4_4:+50077837 None:intergenic
GTTGATACTGCATCAATATT+GGG 0.387116 4_4:+50077921 None:intergenic
GCTGCAGCAGTTAAACCTTC+TGG 0.393891 4_4:-50081849 Msa0685810:CDS
TGGTCAAGTGTCAAACCTTC+AGG 0.400079 4_4:-50080134 Msa0685810:intron
TCTATTTCTGGAATGTTACT+TGG 0.402869 4_4:+50079384 None:intergenic
CAATATGAAGTGATTTACTT+TGG 0.403428 4_4:+50080536 None:intergenic
TCTTCCACTGAAAGTTGAGC+TGG 0.403497 4_4:+50078987 None:intergenic
ATGGATACTGCATCAGTATT+GGG 0.405249 4_4:+50077879 None:intergenic
GTTGTTCTGTTTCTTTCTGA+GGG 0.405384 4_4:+50079694 None:intergenic
CAGACAACAACTTCCTCAAA+AGG 0.412884 4_4:-50079351 Msa0685810:CDS
TTCAGGGAGCTTATAAAGCT+TGG 0.416341 4_4:-50081443 Msa0685810:intron
TCTTTCTGAGGGGAAATACT+AGG 0.416692 4_4:+50079705 None:intergenic
TGTATCTTCCACTGAGAGTT+GGG 0.420266 4_4:+50077761 None:intergenic
GATAACTTAGTATTTGTTGC+TGG 0.422708 4_4:-50081589 Msa0685810:CDS
ACCTTGGGCGAAGGAATGTA+AGG 0.425014 4_4:+50079893 None:intergenic
AGATCCTGTCCATCCTCCTT+TGG 0.426961 4_4:+50077738 None:intergenic
AAATCAACTTACATTGCATA+AGG 0.428183 4_4:+50078909 None:intergenic
TTGAAGTCAGAGCTGGAGTA+AGG 0.429917 4_4:-50081418 Msa0685810:CDS
TCACAATGACTTACTGTGTA+TGG 0.432865 4_4:+50080321 None:intergenic
CTAGGAACTGCCTCTGCCTA+TGG 0.433083 4_4:-50077404 Msa0685810:exon
AACAGATTGGATCAGCATTA+GGG 0.436120 4_4:-50080773 Msa0685810:CDS
AAATACTAAGTTATCATCCT+TGG 0.436502 4_4:+50081597 None:intergenic
GGTTGTTCTGTTTCTTTCTG+AGG 0.437247 4_4:+50079693 None:intergenic
ACTTTCATATTGTAAAATAG+TGG 0.440552 4_4:-50079987 Msa0685810:CDS
GTGTATCTTCCACTGAGAGT+TGG 0.442393 4_4:+50077760 None:intergenic
GGTGAAAGTGGTCTTGACTT+TGG 0.446897 4_4:+50077708 None:intergenic
CCATTAGAATCTTCTATCAA+TGG 0.452110 4_4:+50082036 None:intergenic
CAAAGTATCTTCAGTTGATA+GGG 0.452346 4_4:+50080162 None:intergenic
GGGGAGTCTTGTGTTGGAAA+AGG 0.452651 4_4:-50080377 Msa0685810:CDS
GAACTAGGAGGCTTTAAATC+AGG 0.455562 4_4:+50077987 None:intergenic
GAACTAGGAGGCTTTAAATC+AGG 0.455562 4_4:+50079095 None:intergenic
GGTGAAAGTGGTCTTGACTT+TGG 0.459043 4_4:+50078930 None:intergenic
GAATCAACTTACATTGCAAA+AGG 0.459172 4_4:+50077687 None:intergenic
TATGGATACTGCATCAGTAT+TGG 0.460775 4_4:+50077878 None:intergenic
GTATTTGTTGCTGGTGCTAC+CGG 0.461659 4_4:-50081580 Msa0685810:CDS
ATTGCTACGGATTCTACTCC+TGG 0.465646 4_4:+50081767 None:intergenic
ATCAACATCTTCTGTGGGTG+GGG 0.466478 4_4:-50077820 Msa0685810:CDS
ATCAACATCTTCTGTGGGTG+GGG 0.466478 4_4:-50077904 Msa0685810:CDS
TTCCTTCTCACTGGCACCAA+TGG 0.467693 4_4:+50080728 None:intergenic
AAATACATCTTCTGTGTGTT+CGG 0.469271 4_4:-50077946 Msa0685810:CDS
TTGGAGAAGCCAGAACAGAT+TGG 0.469675 4_4:-50080786 Msa0685810:CDS
GGATGGAAGTATGAACTCTT+TGG 0.478979 4_4:+50081943 None:intergenic
TGCTCAGAGAGCTGGTGCAT+TGG 0.480019 4_4:-50081393 Msa0685810:CDS
GGTTGTTCTGTTACTTTCTG+AGG 0.482284 4_4:+50079639 None:intergenic
GTTCATGAAATGTGAGTACT+TGG 0.485043 4_4:+50081812 None:intergenic
TATCAACATCTTCTGTGGGT+GGG 0.486345 4_4:-50077821 Msa0685810:CDS
TATCAACATCTTCTGTGGGT+GGG 0.486345 4_4:-50077905 Msa0685810:CDS
ACTGAAGATACTTTGTTTGG+TGG 0.487838 4_4:-50080154 Msa0685810:CDS
TCTTCCACTGAGAGTTGGGC+TGG 0.488054 4_4:+50077765 None:intergenic
GTCGAAAATTTCCTTCTCAC+TGG 0.495824 4_4:+50080719 None:intergenic
TTCATATTGGTTACTTCACT+GGG 0.496841 4_4:-50080522 Msa0685810:CDS
TCACTAGGCTTAACTGGAGA+AGG 0.498219 4_4:+50079462 None:intergenic
CATAGGCAGAGGCAGTTCCT+AGG 0.501250 4_4:+50077405 None:intergenic
GTAGGCCTCTCCATGCCTCC+AGG 0.501371 4_4:+50080214 None:intergenic
GTGACATTAGCCGAGGGAGC+TGG 0.501670 4_4:+50079738 None:intergenic
AGAGGAGGGAATGGTAGTTG+AGG 0.502856 4_4:+50081887 None:intergenic
GCATTAGGAGATGGTGAACT+AGG 0.505609 4_4:+50077972 None:intergenic
GCATTAGGAGATGGTGAACT+AGG 0.505609 4_4:+50079080 None:intergenic
TCTTGTTACCAGCATCAACT+AGG 0.506630 4_4:+50080655 None:intergenic
AAAGCGGCTTACGCTGCAAA+AGG 0.509111 4_4:+50079312 None:intergenic
GTAAGGAGTGCTCAGAGAGC+TGG 0.510095 4_4:-50081401 Msa0685810:CDS
CTAACCTTGTCTGATTCCAT+AGG 0.511130 4_4:+50077388 None:intergenic
GTGGTCTTGACTTTGGCTCA+TGG 0.511247 4_4:+50078937 None:intergenic
ACCTTCCTTCAGACAATCCT+AGG 0.512572 4_4:-50077422 Msa0685810:exon
ATCAATATCCACATCTTCTG+TGG 0.513109 4_4:-50079048 Msa0685810:CDS
TCTACTCCTGGAAGGTGTTG+TGG 0.513273 4_4:+50081779 None:intergenic
TACATTGCAAAAGGTGAAAG+TGG 0.514619 4_4:+50077696 None:intergenic
GAAGACACCCCACAGGATGA+TGG 0.516796 4_4:-50078969 Msa0685810:CDS
CATTGGTATGGCTTGAAGGA+TGG 0.517971 4_4:+50081926 None:intergenic
CTTGGAGCATCTGAAGAACT+AGG 0.518040 4_4:+50079402 None:intergenic
TGTCAATGGCGCAGTTGTCT+CGG 0.519089 4_4:+50079955 None:intergenic
TACATTGCATAAGGTGAAAG+TGG 0.521440 4_4:+50078918 None:intergenic
ATCCACATCTTCTGTGGGTG+AGG 0.521943 4_4:-50079042 Msa0685810:CDS
GCCATGTAATCTATTCGATA+AGG 0.522613 4_4:+50080687 None:intergenic
CTGGAAGGTGTTGTGGTGAA+AGG 0.523075 4_4:+50081786 None:intergenic
GATGGAAGCAACTATGTGAA+TGG 0.524074 4_4:-50077203 Msa0685810:three_prime_UTR
CACATCTTCTGTGGGTGAGG+TGG 0.525593 4_4:-50079039 Msa0685810:CDS
CCCTTACATTCCTTCGCCCA+AGG 0.525837 4_4:-50079894 Msa0685810:intron
ATGCTAGGCACTTCTGCCAC+TGG 0.528403 4_4:+50079666 None:intergenic
TACACCAAAGGAGGATGGAC+AGG 0.532634 4_4:-50077742 Msa0685810:CDS
GGTACAAGTGGAGGGAGTGA+AGG 0.534697 4_4:-50080917 Msa0685810:intron
AATTCAGGTTGCTGAACTCA+TGG 0.535898 4_4:-50080032 Msa0685810:intron
TTTATCTGTTTCTTGTCACT+AGG 0.538287 4_4:+50079447 None:intergenic
AAGGAAGGTGATGGTGATGC+AGG 0.540221 4_4:+50077436 None:intergenic
CCATTGATAGAAGATTCTAA+TGG 0.541034 4_4:-50082036 Msa0685810:five_prime_UTR
AGACAACAACTTCCTCAAAA+GGG 0.544213 4_4:-50079350 Msa0685810:CDS
TGTAGAGAAGCTTGAAATTG+TGG 0.545007 4_4:-50080817 Msa0685810:CDS
GTATCAACATCTTCTGTGGG+TGG 0.545073 4_4:-50077822 Msa0685810:CDS
GTATCAACATCTTCTGTGGG+TGG 0.545073 4_4:-50077906 Msa0685810:CDS
TGTTACTCAAAATATGAAGA+TGG 0.547752 4_4:-50077221 Msa0685810:three_prime_UTR
ACTTTCTGAGGAGTAATGCT+AGG 0.547925 4_4:+50079651 None:intergenic
CACTAGGCTTAACTGGAGAA+GGG 0.550734 4_4:+50079463 None:intergenic
GTAATCTATTCGATAAGGTC+CGG 0.552580 4_4:+50080692 None:intergenic
CACCATTGGTGCCAGTGAGA+AGG 0.552835 4_4:-50080730 Msa0685810:CDS
GATAGTGAGACCTGGAGGCA+TGG 0.552896 4_4:-50080224 Msa0685810:CDS
TGAGAAAGCCTCCATTGGTA+TGG 0.554157 4_4:+50081914 None:intergenic
GAGCTCTTATGATATTGCTA+CGG 0.556118 4_4:+50081754 None:intergenic
AGCTCCCTCGGCTAATGTCA+CGG 0.558689 4_4:-50079736 Msa0685810:CDS
GATTCTGTCCATCATCCTGT+GGG 0.562158 4_4:+50078961 None:intergenic
GGAATGTAAGGGCGTTGAGA+AGG 0.562301 4_4:+50079905 None:intergenic
TCATCAAGAAATAAATGGCA+TGG 0.563194 4_4:+50077170 None:intergenic
CTCTCTACGTGTTAGAGAGG+AGG 0.563295 4_4:+50081872 None:intergenic
GTGACTGAGAAAGCCTCCAT+TGG 0.563724 4_4:+50081909 None:intergenic
GATGTGGATATTGATGTAGT+TGG 0.564321 4_4:+50079056 None:intergenic
TGCTGAACTCATGGCAGCCA+TGG 0.565756 4_4:-50080023 Msa0685810:CDS
CTTCCACTGAAAGTTGAGCT+GGG 0.565860 4_4:+50078988 None:intergenic
TGAGTAACAATCCTCCATGT+GGG 0.566650 4_4:+50077235 None:intergenic
AAGCTTGATGGTACAAGTGG+AGG 0.568328 4_4:-50080926 Msa0685810:CDS
TGGAAGGTGTTGTGGTGAAA+GGG 0.568808 4_4:+50081787 None:intergenic
TGGAAGTATGAACTCTTTGG+TGG 0.570655 4_4:+50081946 None:intergenic
AGCATTAGGGAATGCATCAA+AGG 0.575114 4_4:-50080760 Msa0685810:CDS
AGATTCTGTCCATCATCCTG+TGG 0.575424 4_4:+50078960 None:intergenic
ACCTTATCGAATAGATTACA+TGG 0.577220 4_4:-50080688 Msa0685810:CDS
GAAGAAGCATTGCTAGCAAG+TGG 0.578411 4_4:-50080348 Msa0685810:CDS
TGTCAGTAGTCCAGCTCCCT+CGG 0.580026 4_4:-50079748 Msa0685810:CDS
ATTGAGGAAGTATCAAGTAA+TGG 0.580305 4_4:-50079011 Msa0685810:CDS
GAATCTTCTATCAATGGCAG+TGG 0.580736 4_4:+50082042 None:intergenic
GCATCTGAAGAACTAGGTGT+TGG 0.583270 4_4:+50079408 None:intergenic
TCAATATCCACATCTTCTGT+GGG 0.583412 4_4:-50079047 Msa0685810:CDS
TCTCTACGTGTTAGAGAGGA+GGG 0.583672 4_4:+50081873 None:intergenic
ACGTGTTAGAGAGGAGGGAA+TGG 0.583834 4_4:+50081878 None:intergenic
TTGAAGCTTGATGGTACAAG+TGG 0.587112 4_4:-50080929 Msa0685810:CDS
ACTCACTTGAGAATAGCTGC+AGG 0.587473 4_4:+50080480 None:intergenic
GCTGGTGCTACCGGAAAAGT+TGG 0.589304 4_4:-50081571 Msa0685810:CDS
TTAACTGGAGAAGGGGATGA+CGG 0.590019 4_4:+50079471 None:intergenic
TTCATATTGTAAAATAGTGG+AGG 0.590861 4_4:-50079984 Msa0685810:CDS
ATCCATATCTTCTGTGAGTG+AGG 0.591930 4_4:-50077862 Msa0685810:CDS
GAAGATACACCAAAGGAGGA+TGG 0.594365 4_4:-50077747 Msa0685810:CDS
TTGTCTGATTCCATAGGCAG+AGG 0.596732 4_4:+50077394 None:intergenic
GAAAGGTTGACATGGCCAGA+AGG 0.599944 4_4:+50081834 None:intergenic
AGCTTGATGGTACAAGTGGA+GGG 0.600932 4_4:-50080925 Msa0685810:CDS
TGGCCCAGCTCAACTTTCAG+TGG 0.601032 4_4:-50078991 Msa0685810:CDS
TATGTGTGGATATCATATCA+TGG 0.601387 4_4:+50082078 None:intergenic
TCCTAGGATTGTCTGAAGGA+AGG 0.603155 4_4:+50077421 None:intergenic
CACCTCACCCACAGAAGATG+TGG 0.603210 4_4:+50079040 None:intergenic
TCAAAGGTGATATGCACCAT+TGG 0.604357 4_4:-50080744 Msa0685810:CDS
GGGTGAGGTGGCCAAGATTG+AGG 0.606108 4_4:-50079027 Msa0685810:CDS
TTGTTCTGTTTCTTTCTGAG+GGG 0.606733 4_4:+50079695 None:intergenic
TTGAGTAACAATCCTCCATG+TGG 0.607190 4_4:+50077234 None:intergenic
CATCCTTCAAGCCATACCAA+TGG 0.607942 4_4:-50081925 Msa0685810:exon
TGCAGTATCAACATCTTCTG+TGG 0.608160 4_4:-50077826 Msa0685810:CDS
TGCAGTATCAACATCTTCTG+TGG 0.608160 4_4:-50077910 Msa0685810:CDS
AGTCTTGTGTTGGAAAAGGA+AGG 0.608353 4_4:-50080373 Msa0685810:CDS
CCTTCAAGCCATACCAATGG+AGG 0.608411 4_4:-50081922 Msa0685810:exon
AACAGAACAACCAGAACCAG+TGG 0.608935 4_4:-50079682 Msa0685810:CDS
GTGCAATCCTTTGCTATGTG+TGG 0.609108 4_4:+50082064 None:intergenic
TGCTTCCGTGACATTAGCCG+AGG 0.609832 4_4:+50079731 None:intergenic
AACAACTTCCTCAAAAGGGA+AGG 0.609863 4_4:-50079346 Msa0685810:CDS
GAAGTACTTACCTTGGGCGA+AGG 0.612425 4_4:+50079884 None:intergenic
GTTTGCTTGTAAGCATCAGT+AGG 0.613470 4_4:+50080196 None:intergenic
GCAGTATCAACATCTTCTGT+GGG 0.616304 4_4:-50077825 Msa0685810:CDS
GCAGTATCAACATCTTCTGT+GGG 0.616304 4_4:-50077909 Msa0685810:CDS
ATTGATGCAGTATCAAGCAA+TGG 0.622304 4_4:-50077789 Msa0685810:CDS
CTACGGATTCTACTCCTGGA+AGG 0.622955 4_4:+50081771 None:intergenic
AAGTTCGGGATTCTTAGCCA+TGG 0.624516 4_4:+50080006 None:intergenic
AAGTTGGTTCAAGAACAGTC+AGG 0.626940 4_4:-50081555 Msa0685810:intron
TTCAGTGGAAGACACCCCAC+AGG 0.630088 4_4:-50078976 Msa0685810:CDS
AGTTTATGTAGCAACCCACA+TGG 0.631927 4_4:-50077249 Msa0685810:three_prime_UTR
CTCCTCTCTAACACGTAGAG+AGG 0.634813 4_4:-50081871 Msa0685810:CDS
GGAAGTATGAACTCTTTGGT+GGG 0.635936 4_4:+50081947 None:intergenic
CCTTGGGCGAAGGAATGTAA+GGG 0.638040 4_4:+50079894 None:intergenic
ATGATATCCACACATAGCAA+AGG 0.638185 4_4:-50082071 Msa0685810:five_prime_UTR
GAAGGTGATGGTGATGCAGG+AGG 0.640994 4_4:+50077439 None:intergenic
GTATTTGGTGCATTAGGAGA+TGG 0.641520 4_4:+50077963 None:intergenic
ACTAGGCTTAACTGGAGAAG+GGG 0.642549 4_4:+50079464 None:intergenic
TGGACCAGCCCAACTCTCAG+TGG 0.643488 4_4:-50077769 Msa0685810:CDS
AGTGGAAGATACACCAAAGG+AGG 0.647962 4_4:-50077751 Msa0685810:CDS
TTAGGAGATGGTGAACTAGG+AGG 0.652667 4_4:+50077975 None:intergenic
TTAGGAGATGGTGAACTAGG+AGG 0.652667 4_4:+50079083 None:intergenic
TGAGACCTGGAGGCATGGAG+AGG 0.657345 4_4:-50080219 Msa0685810:CDS
AGCCTCTCTACGTGTTAGAG+AGG 0.660056 4_4:+50081869 None:intergenic
TGAAATGTGAGTACTTGGAA+AGG 0.660451 4_4:+50081817 None:intergenic
CAGTTCCTAGGATTGTCTGA+AGG 0.661742 4_4:+50077417 None:intergenic
TACGCAGTATAAGGAGAAAG+CGG 0.663306 4_4:+50079597 None:intergenic
ACTGGAGAAGGGGATGACGG+TGG 0.666454 4_4:+50079474 None:intergenic
CTCAGTGGAAGATACACCAA+AGG 0.671918 4_4:-50077754 Msa0685810:CDS
GTAGTTGGTGCATTAGGAGA+TGG 0.677079 4_4:+50079071 None:intergenic
TCTGCCTATGGAATCAGACA+AGG 0.677678 4_4:-50077392 Msa0685810:intron
GATTGTCTGAAGGAAGGTGA+TGG 0.681966 4_4:+50077427 None:intergenic
GCTTCCGTGACATTAGCCGA+GGG 0.683279 4_4:+50079732 None:intergenic
AACAGAACAACCGAAACCAG+TGG 0.697375 4_4:-50079628 Msa0685810:CDS
TTTCAGATAGTGAGACCTGG+AGG 0.699888 4_4:-50080229 Msa0685810:intron
ATTCTGTCCATCATCCTGTG+GGG 0.704456 4_4:+50078962 None:intergenic
AGTACTTGGAAAGGTTGACA+TGG 0.719280 4_4:+50081826 None:intergenic
TTATGTAGCAACCCACATGG+AGG 0.728794 4_4:-50077246 Msa0685810:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATTAACTTCTTAAAA+CGG - chr4_4:50078037-50078056 Msa0685810:intron 10.0%
!! AACATAAAAATAAGATAATT+AGG + chr4_4:50078778-50078797 None:intergenic 10.0%
!!! ATTTAAGATATATAGATATA+TGG - chr4_4:50078971-50078990 Msa0685810:CDS 10.0%
!! TTTCTATAACAAATACAATA+AGG + chr4_4:50077921-50077940 None:intergenic 15.0%
!!! TCTATTTTTGTAGTTTATTT+TGG - chr4_4:50078645-50078664 Msa0685810:intron 15.0%
!!! CTATTTTTGTAGTTTATTTT+GGG - chr4_4:50078646-50078665 Msa0685810:intron 15.0%
!!! TATTTTTGTAGTTTATTTTG+GGG - chr4_4:50078647-50078666 Msa0685810:intron 15.0%
!!! TATTTTACAATATGAAAGTT+CGG + chr4_4:50079055-50079074 None:intergenic 15.0%
!!! CATAATTGTGATATATTTTT+TGG - chr4_4:50081746-50081765 Msa0685810:CDS 15.0%
!! GATTTAACTAATGGAATATT+TGG - chr4_4:50077705-50077724 Msa0685810:CDS 20.0%
!!! TAGCTTATATGAAAACATTT+TGG - chr4_4:50077895-50077914 Msa0685810:CDS 20.0%
!!! ATTTTACAATATGAAAGTTC+GGG + chr4_4:50079054-50079073 None:intergenic 20.0%
!! ACTTTCATATTGTAAAATAG+TGG - chr4_4:50079056-50079075 Msa0685810:CDS 20.0%
!! GTCACAAAATGTTTATTATA+TGG + chr4_4:50079184-50079203 None:intergenic 20.0%
!!! TTAATTGATTACGTTTTCTT+TGG - chr4_4:50079246-50079265 Msa0685810:intron 20.0%
!! TATATACCAACTTAGTTATT+TGG + chr4_4:50079524-50079543 None:intergenic 20.0%
!! AAGAACTAAGAAAAAGTTAA+AGG + chr4_4:50080166-50080185 None:intergenic 20.0%
!!! ACAAACATTTTACAATTTCA+GGG + chr4_4:50080523-50080542 None:intergenic 20.0%
!!! CTAATTTGCATATGAAATTT+AGG + chr4_4:50080730-50080749 None:intergenic 20.0%
!!! AACAACATTTTACAATTTCA+TGG - chr4_4:50080858-50080877 Msa0685810:intron 20.0%
!! GAAGAAATAAGAAAAATTGA+TGG + chr4_4:50081389-50081408 None:intergenic 20.0%
!! AAAAGTCATCAAGAAATAAA+TGG + chr4_4:50081881-50081900 None:intergenic 20.0%
!! TTGCAATTTAAATAAGGAAA+AGG - chr4_4:50081961-50081980 Msa0685810:five_prime_UTR 20.0%
!!! TGAAAGTACTATAACATAAA+TGG + chr4_4:50082011-50082030 None:intergenic 20.0%
! TACATGTTTAACATTCATAC+AGG + chr4_4:50077374-50077393 None:intergenic 25.0%
! CATGTATATATCTTCATTCA+AGG - chr4_4:50077388-50077407 Msa0685810:intron 25.0%
! AAATACTAAGTTATCATCCT+TGG + chr4_4:50077449-50077468 None:intergenic 25.0%
! AACAAAGTTACTATCTCAAA+AGG + chr4_4:50077552-50077571 None:intergenic 25.0%
!! GATTATTTGAGTTTATCTAC+TGG - chr4_4:50077727-50077746 Msa0685810:CDS 25.0%
! AATAAGATGAAAACAGCTTA+TGG + chr4_4:50077808-50077827 None:intergenic 25.0%
!!! TCTTATTTTCATATGCTCAT+CGG - chr4_4:50077821-50077840 Msa0685810:CDS 25.0%
! AACTTCTTAAAACGGATAAT+TGG - chr4_4:50078045-50078064 Msa0685810:intron 25.0%
!!! GTTTCAATGCTATTTGTTTT+AGG - chr4_4:50078428-50078447 Msa0685810:intron 25.0%
! CAATATGAAGTGATTTACTT+TGG + chr4_4:50078510-50078529 None:intergenic 25.0%
! CAAAGTAAATCACTTCATAT+TGG - chr4_4:50078508-50078527 Msa0685810:intron 25.0%
! TTCATATTGTAAAATAGTGG+AGG - chr4_4:50079059-50079078 Msa0685810:CDS 25.0%
! AGAAAACGTAATCAATTAAC+AGG + chr4_4:50079245-50079264 None:intergenic 25.0%
! CAAATTAAAGAGGTTTAGAT+GGG + chr4_4:50079809-50079828 None:intergenic 25.0%
! AAATCAACTTACATTGCATA+AGG + chr4_4:50080137-50080156 None:intergenic 25.0%
! CTTTCTTCTATAATAAGGAA+TGG + chr4_4:50080202-50080221 None:intergenic 25.0%
! CTTATTATAGAAGAAAGAGA+GGG - chr4_4:50080205-50080224 Msa0685810:CDS 25.0%
! TTATTATAGAAGAAAGAGAG+GGG - chr4_4:50080206-50080225 Msa0685810:CDS 25.0%
!!! ATAACTGTGACTTTGATTTT+TGG - chr4_4:50080265-50080284 Msa0685810:intron 25.0%
!! GACAAACATTTTACAATTTC+AGG + chr4_4:50080524-50080543 None:intergenic 25.0%
!! CTAATTTGCCTATGAAATTT+AGG - chr4_4:50080652-50080671 Msa0685810:intron 25.0%
! TAAAAAAATTGTCCTTGAGA+TGG - chr4_4:50080704-50080723 Msa0685810:CDS 25.0%
! TTACGAAAGAAGTTAACTAA+GGG - chr4_4:50080826-50080845 Msa0685810:intron 25.0%
! GTATTTGTCAATTTGCAAAA+AGG - chr4_4:50080883-50080902 Msa0685810:intron 25.0%
! TATGTAAGATCAAAACTTTG+TGG - chr4_4:50080972-50080991 Msa0685810:intron 25.0%
!! AAGAAAAATTGATGGTAAGT+TGG + chr4_4:50081381-50081400 None:intergenic 25.0%
! AATAACGAATGAAGAATCTT+TGG + chr4_4:50081413-50081432 None:intergenic 25.0%
!!! ATATATTTTTTGGAGCGAAT+AGG - chr4_4:50081756-50081775 Msa0685810:CDS 25.0%
! TGTTACTCAAAATATGAAGA+TGG - chr4_4:50081822-50081841 Msa0685810:CDS 25.0%
!!! TATTTCTTGATGACTTTTTG+AGG - chr4_4:50081883-50081902 Msa0685810:CDS 25.0%
!! CCTTATTTAAATTGCAACAT+GGG + chr4_4:50081958-50081977 None:intergenic 25.0%
!! TCCTTATTTAAATTGCAACA+TGG + chr4_4:50081959-50081978 None:intergenic 25.0%
TATGTGTGGATATCATATCA+TGG + chr4_4:50076968-50076987 None:intergenic 30.0%
CCATTAGAATCTTCTATCAA+TGG + chr4_4:50077010-50077029 None:intergenic 30.0%
CCATTGATAGAAGATTCTAA+TGG - chr4_4:50077007-50077026 Msa0685810:three_prime_UTR 30.0%
! GATAACTTAGTATTTGTTGC+TGG - chr4_4:50077454-50077473 Msa0685810:CDS 30.0%
!! CTTATTTTCATATGCTCATC+GGG - chr4_4:50077822-50077841 Msa0685810:CDS 30.0%
! TACTATTAGTCATGTCACTT+AGG + chr4_4:50078019-50078038 None:intergenic 30.0%
GTTAAACAATTGAAGCTTGA+TGG - chr4_4:50078105-50078124 Msa0685810:intron 30.0%
GTCAATGAGAAAAACATTCT+TGG + chr4_4:50078156-50078175 None:intergenic 30.0%
! GTTGGATAACAGAATGTTTT+TGG - chr4_4:50078190-50078209 Msa0685810:intron 30.0%
TGAAATTGTGGAATGTGATT+TGG - chr4_4:50078238-50078257 Msa0685810:intron 30.0%
! AAGGAAATTTTCGACATTAC+CGG - chr4_4:50078332-50078351 Msa0685810:intron 30.0%
ACCTTATCGAATAGATTACA+TGG - chr4_4:50078355-50078374 Msa0685810:intron 30.0%
! TTCATATTGGTTACTTCACT+GGG - chr4_4:50078521-50078540 Msa0685810:intron 30.0%
! CAAAGTATCTTCAGTTGATA+GGG + chr4_4:50078884-50078903 None:intergenic 30.0%
! ACAAAGTATCTTCAGTTGAT+AGG + chr4_4:50078885-50078904 None:intergenic 30.0%
TCAACTGAAGATACTTTGTT+TGG - chr4_4:50078886-50078905 Msa0685810:intron 30.0%
TTTACATGATAAGTACCTGA+AGG + chr4_4:50078927-50078946 None:intergenic 30.0%
!! TATATGGAAGTACTTACCTT+GGG + chr4_4:50079168-50079187 None:intergenic 30.0%
!! TTATATGGAAGTACTTACCT+TGG + chr4_4:50079169-50079188 None:intergenic 30.0%
AACAGGAATGTTAAACTACT+AGG + chr4_4:50079228-50079247 None:intergenic 30.0%
! TTGATTACGTTTTCTTTGGA+AGG - chr4_4:50079250-50079269 Msa0685810:intron 30.0%
GTCAACAAATATTAGCAATC+TGG + chr4_4:50079474-50079493 None:intergenic 30.0%
! GTTGACAGTCAATTTTTATG+TGG - chr4_4:50079488-50079507 Msa0685810:CDS 30.0%
!! GTCAATTTTTATGTGGACTA+TGG - chr4_4:50079495-50079514 Msa0685810:intron 30.0%
!! AATTTTTATGTGGACTATGG+AGG - chr4_4:50079498-50079517 Msa0685810:intron 30.0%
! TTTATCTGTTTCTTGTCACT+AGG + chr4_4:50079599-50079618 None:intergenic 30.0%
!! TCTATTTCTGGAATGTTACT+TGG + chr4_4:50079662-50079681 None:intergenic 30.0%
TGAGAAATGACATCTATTTC+TGG + chr4_4:50079674-50079693 None:intergenic 30.0%
CCAAATTAAAGAGGTTTAGA+TGG + chr4_4:50079810-50079829 None:intergenic 30.0%
CCATCTAAACCTCTTTAATT+TGG - chr4_4:50079807-50079826 Msa0685810:intron 30.0%
!! TGCTAAAGTAGTTGATAACA+AGG + chr4_4:50079862-50079881 None:intergenic 30.0%
GGAAAACAAACCACAAATTT+AGG + chr4_4:50079901-50079920 None:intergenic 30.0%
GCAGGTATATAAAATACACA+AGG + chr4_4:50079922-50079941 None:intergenic 30.0%
!! ATTGAGGAAGTATCAAGTAA+TGG - chr4_4:50080032-50080051 Msa0685810:intron 30.0%
CCTCTCTTTCTTCTATAATA+AGG + chr4_4:50080207-50080226 None:intergenic 30.0%
CCTTATTATAGAAGAAAGAG+AGG - chr4_4:50080204-50080223 Msa0685810:CDS 30.0%
AAGTGAGTGAATAAGTCTTA+TGG - chr4_4:50080297-50080316 Msa0685810:intron 30.0%
TGGTAATTGATGAATGTACT+AGG - chr4_4:50080317-50080336 Msa0685810:intron 30.0%
ATTGATGAATGTACTAGGTT+AGG - chr4_4:50080322-50080341 Msa0685810:intron 30.0%
TAGTGCGAAATTTACTATTG+TGG - chr4_4:50080409-50080428 Msa0685810:intron 30.0%
TTCCAAATTCGCAAAAATCA+GGG + chr4_4:50080494-50080513 None:intergenic 30.0%
TTTCCAAATTCGCAAAAATC+AGG + chr4_4:50080495-50080514 None:intergenic 30.0%
! ACTGTAAACTTTTAGTGGTA+GGG - chr4_4:50080555-50080574 Msa0685810:intron 30.0%
ACATTGATGTAGGATTAACA+TGG + chr4_4:50080618-50080637 None:intergenic 30.0%
!! TTCATAGGCAAATTAGTCTT+TGG + chr4_4:50080648-50080667 None:intergenic 30.0%
TCTGAAGACCTAAATTTCAT+AGG + chr4_4:50080663-50080682 None:intergenic 30.0%
TTTAGTGATTGCAATTGTGA+AGG + chr4_4:50080688-50080707 None:intergenic 30.0%
TAGTTAACTTCTTTCGTAAG+AGG + chr4_4:50080825-50080844 None:intergenic 30.0%
CTTACGAAAGAAGTTAACTA+AGG - chr4_4:50080825-50080844 Msa0685810:intron 30.0%
TTTGTCAATTTGCAAAAAGG+AGG - chr4_4:50080886-50080905 Msa0685810:intron 30.0%
TTGTCAATTTGCAAAAAGGA+GGG - chr4_4:50080887-50080906 Msa0685810:intron 30.0%
! TTTTGACCCATACAATTTTG+AGG - chr4_4:50080914-50080933 Msa0685810:intron 30.0%
!!! TGGTTTGTTTTCTTGTATAC+AGG - chr4_4:50081030-50081049 Msa0685810:intron 30.0%
AAATACATCTTCTGTGTGTT+CGG - chr4_4:50081097-50081116 Msa0685810:intron 30.0%
GTTGATACTGCATCAATATT+GGG + chr4_4:50081125-50081144 None:intergenic 30.0%
TGTTGATACTGCATCAATAT+TGG + chr4_4:50081126-50081145 None:intergenic 30.0%
GTTGATACTGCATCAATATT+GGG + chr4_4:50081125-50081144 None:intergenic 30.0%
TGTTGATACTGCATCAATAT+TGG + chr4_4:50081126-50081145 None:intergenic 30.0%
CTTGATACTGCATCAATATT+GGG + chr4_4:50081251-50081270 None:intergenic 30.0%
GAATCAACTTACATTGCAAA+AGG + chr4_4:50081359-50081378 None:intergenic 30.0%
ATTATAGAAGAGAGAAAGAG+AGG - chr4_4:50081430-50081449 Msa0685810:CDS 30.0%
! CTTATGCAAATGAACTTTTC+AGG - chr4_4:50081566-50081585 Msa0685810:CDS 30.0%
!!! AAATGAACTTTTCAGGTATG+AGG - chr4_4:50081573-50081592 Msa0685810:CDS 30.0%
TCATCAAGAAATAAATGGCA+TGG + chr4_4:50081876-50081895 None:intergenic 30.0%
CCCATGTTGCAATTTAAATA+AGG - chr4_4:50081955-50081974 Msa0685810:five_prime_UTR 30.0%
! TTTTCTCATACCTAAAGAGT+GGG + chr4_4:50082045-50082064 None:intergenic 30.0%
! ATTTTCTCATACCTAAAGAG+TGG + chr4_4:50082046-50082065 None:intergenic 30.0%
ATGATATCCACACATAGCAA+AGG - chr4_4:50076972-50076991 Msa0685810:three_prime_UTR 35.0%
TGAAATGTGAGTACTTGGAA+AGG + chr4_4:50077229-50077248 None:intergenic 35.0%
GTTCATGAAATGTGAGTACT+TGG + chr4_4:50077234-50077253 None:intergenic 35.0%
GAGCTCTTATGATATTGCTA+CGG + chr4_4:50077292-50077311 None:intergenic 35.0%
ATCATAAGAGCTCAAGTTTC+AGG - chr4_4:50077299-50077318 Msa0685810:intron 35.0%
TGCTGAGAAAAAAGATTCCA+AGG - chr4_4:50077429-50077448 Msa0685810:CDS 35.0%
! TGTTCTTGAACCAACTTTTC+CGG + chr4_4:50077485-50077504 None:intergenic 35.0%
AATCAAGTTCAGTACTATGG+TGG + chr4_4:50077527-50077546 None:intergenic 35.0%
GTGAATCAAGTTCAGTACTA+TGG + chr4_4:50077530-50077549 None:intergenic 35.0%
AGCTGTGATAGTTTCATTCA+GGG - chr4_4:50077584-50077603 Msa0685810:intron 35.0%
!! CATTGGTTCAGGTAATAGAA+AGG - chr4_4:50077667-50077686 Msa0685810:intron 35.0%
GTAATAGAAAGGTTACTCTG+TGG - chr4_4:50077678-50077697 Msa0685810:intron 35.0%
! TGTGGTGGTGATTTAACTAA+TGG - chr4_4:50077696-50077715 Msa0685810:intron 35.0%
AGATTGTTTACGAGAGCTTA+CGG - chr4_4:50077764-50077783 Msa0685810:CDS 35.0%
TGTAGAGAAGCTTGAAATTG+TGG - chr4_4:50078226-50078245 Msa0685810:intron 35.0%
AACAGATTGGATCAGCATTA+GGG - chr4_4:50078270-50078289 Msa0685810:intron 35.0%
GTAATCTATTCGATAAGGTC+CGG + chr4_4:50078354-50078373 None:intergenic 35.0%
GCCATGTAATCTATTCGATA+AGG + chr4_4:50078359-50078378 None:intergenic 35.0%
GGTAACAAGAGCTTTCATTA+TGG - chr4_4:50078401-50078420 Msa0685810:intron 35.0%
! CTTCATATTGGTTACTTCAC+TGG - chr4_4:50078520-50078539 Msa0685810:intron 35.0%
TCACTGGGAACAAACAAATT+TGG - chr4_4:50078536-50078555 Msa0685810:intron 35.0%
TCACAATGACTTACTGTGTA+TGG + chr4_4:50078725-50078744 None:intergenic 35.0%
! ACTGAAGATACTTTGTTTGG+TGG - chr4_4:50078889-50078908 Msa0685810:intron 35.0%
!! GTTGATAACTCTCTCAATTC+AGG - chr4_4:50078996-50079015 Msa0685810:CDS 35.0%
! TTTGCAAGAAGTTTTTCTGC+AGG + chr4_4:50079114-50079133 None:intergenic 35.0%
! TTGTTCTGTTTCTTTCTGAG+GGG + chr4_4:50079351-50079370 None:intergenic 35.0%
! GTTGTTCTGTTTCTTTCTGA+GGG + chr4_4:50079352-50079371 None:intergenic 35.0%
AGACAACAACTTCCTCAAAA+GGG - chr4_4:50079693-50079712 Msa0685810:CDS 35.0%
!! TAAGCCGCTTTCTAATTTTG+TGG - chr4_4:50079743-50079762 Msa0685810:CDS 35.0%
AGCACCACAAAATTAGAAAG+CGG + chr4_4:50079750-50079769 None:intergenic 35.0%
TCATAGCTGCCAAATTAAAG+AGG + chr4_4:50079819-50079838 None:intergenic 35.0%
!! TCTTTAATTTGGCAGCTATG+AGG - chr4_4:50079818-50079837 Msa0685810:intron 35.0%
! TACTTTAGCACTTTTATCCG+TGG - chr4_4:50079872-50079891 Msa0685810:intron 35.0%
! ACCACAAATTTAGGATACCA+CGG + chr4_4:50079892-50079911 None:intergenic 35.0%
CTTTAAATCAGGATATCTGC+AGG + chr4_4:50079940-50079959 None:intergenic 35.0%
! ATTGATGTAGTTGGTGCATT+AGG + chr4_4:50079981-50080000 None:intergenic 35.0%
GATGTGGATATTGATGTAGT+TGG + chr4_4:50079990-50080009 None:intergenic 35.0%
ATCAATATCCACATCTTCTG+TGG - chr4_4:50079995-50080014 Msa0685810:CDS 35.0%
TCAATATCCACATCTTCTGT+GGG - chr4_4:50079996-50080015 Msa0685810:CDS 35.0%
ACTTGATACTTCCTCAATCT+TGG + chr4_4:50080030-50080049 None:intergenic 35.0%
TACATTGCATAAGGTGAAAG+TGG + chr4_4:50080128-50080147 None:intergenic 35.0%
!! AATAAGGAATGGAGAGCATT+TGG + chr4_4:50080191-50080210 None:intergenic 35.0%
!! TGATTAAGCCAAAAGCATCA+AGG - chr4_4:50080363-50080382 Msa0685810:CDS 35.0%
TACTGATGCTTACAATTTCG+AGG + chr4_4:50080463-50080482 None:intergenic 35.0%
! GTCTCACTGTAAACTTTTAG+TGG - chr4_4:50080550-50080569 Msa0685810:intron 35.0%
! CACTGTAAACTTTTAGTGGT+AGG - chr4_4:50080554-50080573 Msa0685810:intron 35.0%
TGACATGTTAACTGAATACG+TGG - chr4_4:50080587-50080606 Msa0685810:intron 35.0%
ATGAAATTTAGGCCATCTCA+AGG + chr4_4:50080719-50080738 None:intergenic 35.0%
ACCTGTCCTCAAAATTGTAT+GGG + chr4_4:50080923-50080942 None:intergenic 35.0%
AACCTGTCCTCAAAATTGTA+TGG + chr4_4:50080924-50080943 None:intergenic 35.0%
AAGATCAAAACTTTGTGGAC+AGG - chr4_4:50080977-50080996 Msa0685810:intron 35.0%
TTCGTGGTATCAAAACTTTG+TGG - chr4_4:50081010-50081029 Msa0685810:intron 35.0%
!! GAAGATGTATTTGGTGCATT+AGG + chr4_4:50081089-50081108 None:intergenic 35.0%
GAACACACAGAAGATGTATT+TGG + chr4_4:50081098-50081117 None:intergenic 35.0%
ATGGATACTGCATCAGTATT+GGG + chr4_4:50081167-50081186 None:intergenic 35.0%
TATGGATACTGCATCAGTAT+TGG + chr4_4:50081168-50081187 None:intergenic 35.0%
GCTTGATACTGCATCAATAT+TGG + chr4_4:50081252-50081271 None:intergenic 35.0%
ATTGATGCAGTATCAAGCAA+TGG - chr4_4:50081254-50081273 Msa0685810:intron 35.0%
TACATTGCAAAAGGTGAAAG+TGG + chr4_4:50081350-50081369 None:intergenic 35.0%
ACCATCCGATATCAATCAAA+CGG + chr4_4:50081513-50081532 None:intergenic 35.0%
GAATCTTCTATCAATGGCAG+TGG + chr4_4:50077004-50077023 None:intergenic 40.0%
! GGAAGTATGAACTCTTTGGT+GGG + chr4_4:50077099-50077118 None:intergenic 40.0%
! TGGAAGTATGAACTCTTTGG+TGG + chr4_4:50077100-50077119 None:intergenic 40.0%
! GGATGGAAGTATGAACTCTT+TGG + chr4_4:50077103-50077122 None:intergenic 40.0%
AGTACTTGGAAAGGTTGACA+TGG + chr4_4:50077220-50077239 None:intergenic 40.0%
! AAGTTGGTTCAAGAACAGTC+AGG - chr4_4:50077488-50077507 Msa0685810:intron 40.0%
GAGCTGTGATAGTTTCATTC+AGG - chr4_4:50077583-50077602 Msa0685810:intron 40.0%
TTCAGGGAGCTTATAAAGCT+TGG - chr4_4:50077600-50077619 Msa0685810:intron 40.0%
ATAGAAAGGTTACTCTGTGG+TGG - chr4_4:50077681-50077700 Msa0685810:intron 40.0%
! TTGAAGCTTGATGGTACAAG+TGG - chr4_4:50078114-50078133 Msa0685810:intron 40.0%
TGACAAAAATGCTGCTGTGT+TGG - chr4_4:50078172-50078191 Msa0685810:intron 40.0%
TTTCAAGCTTCTCTACAGCT+GGG + chr4_4:50078223-50078242 None:intergenic 40.0%
ATTTCAAGCTTCTCTACAGC+TGG + chr4_4:50078224-50078243 None:intergenic 40.0%
AATGCTGATCCAATCTGTTC+TGG + chr4_4:50078269-50078288 None:intergenic 40.0%
GAACAGATTGGATCAGCATT+AGG - chr4_4:50078269-50078288 Msa0685810:intron 40.0%
AGCATTAGGGAATGCATCAA+AGG - chr4_4:50078283-50078302 Msa0685810:intron 40.0%
TCAAAGGTGATATGCACCAT+TGG - chr4_4:50078299-50078318 Msa0685810:intron 40.0%
GTCGAAAATTTCCTTCTCAC+TGG + chr4_4:50078327-50078346 None:intergenic 40.0%
!! AGCATCAACTAGGTTTTTGG+TGG + chr4_4:50078381-50078400 None:intergenic 40.0%
! ACCAAAAACCTAGTTGATGC+TGG - chr4_4:50078380-50078399 Msa0685810:intron 40.0%
! ACCAGCATCAACTAGGTTTT+TGG + chr4_4:50078384-50078403 None:intergenic 40.0%
TCTTGTTACCAGCATCAACT+AGG + chr4_4:50078391-50078410 None:intergenic 40.0%
!! TATTTTGGGGAGTCTTGTGT+TGG - chr4_4:50078660-50078679 Msa0685810:intron 40.0%
! AGTCTTGTGTTGGAAAAGGA+AGG - chr4_4:50078670-50078689 Msa0685810:intron 40.0%
! TCTTTTCAGATAGTGAGACC+TGG - chr4_4:50078811-50078830 Msa0685810:intron 40.0%
GTTTGCTTGTAAGCATCAGT+AGG + chr4_4:50078850-50078869 None:intergenic 40.0%
!! AATTCAGGTTGCTGAACTCA+TGG - chr4_4:50079011-50079030 Msa0685810:CDS 40.0%
! AGTTTTTCTGCAGGTGTCAA+TGG + chr4_4:50079105-50079124 None:intergenic 40.0%
ATGTTAAACTACTAGGCAGG+AGG + chr4_4:50079221-50079240 None:intergenic 40.0%
GGAATGTTAAACTACTAGGC+AGG + chr4_4:50079224-50079243 None:intergenic 40.0%
!! ACGTTTTCTTTGGAAGGTAC+AGG - chr4_4:50079256-50079275 Msa0685810:intron 40.0%
! TCTTTCTGAGGGGAAATACT+AGG + chr4_4:50079341-50079360 None:intergenic 40.0%
! GGTTGTTCTGTTTCTTTCTG+AGG + chr4_4:50079353-50079372 None:intergenic 40.0%
! ACTTTCTGAGGAGTAATGCT+AGG + chr4_4:50079395-50079414 None:intergenic 40.0%
!! GGTTGTTCTGTTACTTTCTG+AGG + chr4_4:50079407-50079426 None:intergenic 40.0%
TACGCAGTATAAGGAGAAAG+CGG + chr4_4:50079449-50079468 None:intergenic 40.0%
! AATCTGGCTTACGCAGTATA+AGG + chr4_4:50079458-50079477 None:intergenic 40.0%
TGGAGGCCAAATAACTAAGT+TGG - chr4_4:50079515-50079534 Msa0685810:intron 40.0%
TTCTTGTCACTAGGCTTAAC+TGG + chr4_4:50079590-50079609 None:intergenic 40.0%
CAGACAACAACTTCCTCAAA+AGG - chr4_4:50079692-50079711 Msa0685810:CDS 40.0%
AACAACTTCCTCAAAAGGGA+AGG - chr4_4:50079697-50079716 Msa0685810:CDS 40.0%
!! GTTGATAACAAGGTATCTGC+AGG + chr4_4:50079852-50079871 None:intergenic 40.0%
TCCGTGGTATCCTAAATTTG+TGG - chr4_4:50079888-50079907 Msa0685810:intron 40.0%
!! GAACTAGGAGGCTTTAAATC+AGG + chr4_4:50079951-50079970 None:intergenic 40.0%
TATAGAAGAAAGAGAGGGGA+TGG - chr4_4:50080210-50080229 Msa0685810:CDS 40.0%
! CCATGAATCCTTGATGCTTT+TGG + chr4_4:50080374-50080393 None:intergenic 40.0%
!! CCAAAAGCATCAAGGATTCA+TGG - chr4_4:50080371-50080390 Msa0685810:CDS 40.0%
! GTCCCTGATTTTTGCGAATT+TGG - chr4_4:50080489-50080508 Msa0685810:CDS 40.0%
!! AGGCAAATTAGTCTTTGGTG+TGG + chr4_4:50080643-50080662 None:intergenic 40.0%
CAAATTAGCTCCTAGTGAGT+TGG - chr4_4:50080742-50080761 Msa0685810:CDS 40.0%
!! TGCACTTTGAAACCACATCA+AGG + chr4_4:50080768-50080787 None:intergenic 40.0%
!! ACCCATACAATTTTGAGGAC+AGG - chr4_4:50080919-50080938 Msa0685810:CDS 40.0%
!! GAACTAGGAGGCTTTAAATC+AGG + chr4_4:50079951-50079970 None:intergenic 40.0%
!! GTATTTGGTGCATTAGGAGA+TGG + chr4_4:50081083-50081102 None:intergenic 40.0%
TGCAGTATCAACATCTTCTG+TGG - chr4_4:50081133-50081152 Msa0685810:intron 40.0%
GCAGTATCAACATCTTCTGT+GGG - chr4_4:50081134-50081153 Msa0685810:intron 40.0%
TATCAACATCTTCTGTGGGT+GGG - chr4_4:50081138-50081157 Msa0685810:intron 40.0%
ATCCATATCTTCTGTGAGTG+AGG - chr4_4:50081181-50081200 Msa0685810:intron 40.0%
TGCAGTATCAACATCTTCTG+TGG - chr4_4:50081133-50081152 Msa0685810:intron 40.0%
GCAGTATCAACATCTTCTGT+GGG - chr4_4:50081134-50081153 Msa0685810:intron 40.0%
TATCAACATCTTCTGTGGGT+GGG - chr4_4:50081138-50081157 Msa0685810:intron 40.0%
TGTATCTTCCACTGAGAGTT+GGG + chr4_4:50081285-50081304 None:intergenic 40.0%
GGAAGCCGTTTGATTGATAT+CGG - chr4_4:50081505-50081524 Msa0685810:intron 40.0%
CTAACCTTGTCTGATTCCAT+AGG + chr4_4:50081658-50081677 None:intergenic 40.0%
ATTATGCACACTACGTACAC+TGG - chr4_4:50081720-50081739 Msa0685810:intron 40.0%
AGTTTATGTAGCAACCCACA+TGG - chr4_4:50081794-50081813 Msa0685810:CDS 40.0%
TGAGTAACAATCCTCCATGT+GGG + chr4_4:50081811-50081830 None:intergenic 40.0%
TTGAGTAACAATCCTCCATG+TGG + chr4_4:50081812-50081831 None:intergenic 40.0%
GATGGAAGCAACTATGTGAA+TGG - chr4_4:50081840-50081859 Msa0685810:CDS 40.0%
TTTCATGTTGCCCACTCTTT+AGG - chr4_4:50082032-50082051 Msa0685810:five_prime_UTR 40.0%
! GTGCAATCCTTTGCTATGTG+TGG + chr4_4:50076982-50077001 None:intergenic 45.0%
CATTGGTATGGCTTGAAGGA+TGG + chr4_4:50077120-50077139 None:intergenic 45.0%
CATCCTTCAAGCCATACCAA+TGG - chr4_4:50077118-50077137 Msa0685810:three_prime_UTR 45.0%
TGAGAAAGCCTCCATTGGTA+TGG + chr4_4:50077132-50077151 None:intergenic 45.0%
TCTCTACGTGTTAGAGAGGA+GGG + chr4_4:50077173-50077192 None:intergenic 45.0%
!! TGGAAGGTGTTGTGGTGAAA+GGG + chr4_4:50077259-50077278 None:intergenic 45.0%
ATTGCTACGGATTCTACTCC+TGG + chr4_4:50077279-50077298 None:intergenic 45.0%
! GAGCTCAAGTTTCAGGTGAT+AGG - chr4_4:50077306-50077325 Msa0685810:intron 45.0%
!! GTATTTGTTGCTGGTGCTAC+CGG - chr4_4:50077463-50077482 Msa0685810:intron 45.0%
!!! CTTGGTTTTGAAGTCAGAGC+TGG - chr4_4:50077618-50077637 Msa0685810:intron 45.0%
TTGAAGTCAGAGCTGGAGTA+AGG - chr4_4:50077625-50077644 Msa0685810:intron 45.0%
ATCGGGATAAACCAACAACC+AGG - chr4_4:50077839-50077858 Msa0685810:CDS 45.0%
! AAGCTTGATGGTACAAGTGG+AGG - chr4_4:50078117-50078136 Msa0685810:intron 45.0%
! AGCTTGATGGTACAAGTGGA+GGG - chr4_4:50078118-50078137 Msa0685810:intron 45.0%
TTGGAGAAGCCAGAACAGAT+TGG - chr4_4:50078257-50078276 Msa0685810:intron 45.0%
ACTCACTTGAGAATAGCTGC+AGG + chr4_4:50078566-50078585 None:intergenic 45.0%
!! GAAGAAGCATTGCTAGCAAG+TGG - chr4_4:50078695-50078714 Msa0685810:intron 45.0%
TTTCAGATAGTGAGACCTGG+AGG - chr4_4:50078814-50078833 Msa0685810:intron 45.0%
TGGTCAAGTGTCAAACCTTC+AGG - chr4_4:50078909-50078928 Msa0685810:intron 45.0%
AAGTTCGGGATTCTTAGCCA+TGG + chr4_4:50079040-50079059 None:intergenic 45.0%
AACAGAACAACCAGAACCAG+TGG - chr4_4:50079361-50079380 Msa0685810:CDS 45.0%
AACAGAACAACCGAAACCAG+TGG - chr4_4:50079415-50079434 Msa0685810:CDS 45.0%
TTAACTGGAGAAGGGGATGA+CGG + chr4_4:50079575-50079594 None:intergenic 45.0%
ACTAGGCTTAACTGGAGAAG+GGG + chr4_4:50079582-50079601 None:intergenic 45.0%
CACTAGGCTTAACTGGAGAA+GGG + chr4_4:50079583-50079602 None:intergenic 45.0%
TCACTAGGCTTAACTGGAGA+AGG + chr4_4:50079584-50079603 None:intergenic 45.0%
GCATCTGAAGAACTAGGTGT+TGG + chr4_4:50079638-50079657 None:intergenic 45.0%
! CTTGGAGCATCTGAAGAACT+AGG + chr4_4:50079644-50079663 None:intergenic 45.0%
! AAGAGACTCCTTCCCTTTTG+AGG + chr4_4:50079708-50079727 None:intergenic 45.0%
TTAGGAGATGGTGAACTAGG+AGG + chr4_4:50079963-50079982 None:intergenic 45.0%
GCATTAGGAGATGGTGAACT+AGG + chr4_4:50079966-50079985 None:intergenic 45.0%
! GTAGTTGGTGCATTAGGAGA+TGG + chr4_4:50079975-50079994 None:intergenic 45.0%
CTTCCACTGAAAGTTGAGCT+GGG + chr4_4:50080058-50080077 None:intergenic 45.0%
TCTTCCACTGAAAGTTGAGC+TGG + chr4_4:50080059-50080078 None:intergenic 45.0%
ATTCTGTCCATCATCCTGTG+GGG + chr4_4:50080084-50080103 None:intergenic 45.0%
GATTCTGTCCATCATCCTGT+GGG + chr4_4:50080085-50080104 None:intergenic 45.0%
AGATTCTGTCCATCATCCTG+TGG + chr4_4:50080086-50080105 None:intergenic 45.0%
! GGTGAAAGTGGTCTTGACTT+TGG + chr4_4:50080116-50080135 None:intergenic 45.0%
GATAGCTGTTCAGGACACAT+TGG - chr4_4:50080236-50080255 Msa0685810:intron 45.0%
GACAGGTTTAGCACAATTCG+TGG - chr4_4:50080994-50081013 Msa0685810:intron 45.0%
TTAGGAGATGGTGAACTAGG+AGG + chr4_4:50079963-50079982 None:intergenic 45.0%
GCATTAGGAGATGGTGAACT+AGG + chr4_4:50079966-50079985 None:intergenic 45.0%
GTATCAACATCTTCTGTGGG+TGG - chr4_4:50081137-50081156 Msa0685810:intron 45.0%
ATCAACATCTTCTGTGGGTG+GGG - chr4_4:50081139-50081158 Msa0685810:intron 45.0%
CACCTCACTCACAGAAGATA+TGG + chr4_4:50081186-50081205 None:intergenic 45.0%
GTATCAACATCTTCTGTGGG+TGG - chr4_4:50081137-50081156 Msa0685810:intron 45.0%
ATCAACATCTTCTGTGGGTG+GGG - chr4_4:50081139-50081158 Msa0685810:intron 45.0%
GTGTATCTTCCACTGAGAGT+TGG + chr4_4:50081286-50081305 None:intergenic 45.0%
CTCAGTGGAAGATACACCAA+AGG - chr4_4:50081289-50081308 Msa0685810:intron 45.0%
AGTGGAAGATACACCAAAGG+AGG - chr4_4:50081292-50081311 Msa0685810:intron 45.0%
GAAGATACACCAAAGGAGGA+TGG - chr4_4:50081296-50081315 Msa0685810:intron 45.0%
! GTGGTCTTGACTTTGGTTCA+TGG + chr4_4:50081331-50081350 None:intergenic 45.0%
! GGTGAAAGTGGTCTTGACTT+TGG + chr4_4:50080116-50080135 None:intergenic 45.0%
GCCGTTTGATTGATATCGGA+TGG - chr4_4:50081509-50081528 Msa0685810:intron 45.0%
GATTGTCTGAAGGAAGGTGA+TGG + chr4_4:50081619-50081638 None:intergenic 45.0%
ACCTTCCTTCAGACAATCCT+AGG - chr4_4:50081621-50081640 Msa0685810:CDS 45.0%
TCCTAGGATTGTCTGAAGGA+AGG + chr4_4:50081625-50081644 None:intergenic 45.0%
CAGTTCCTAGGATTGTCTGA+AGG + chr4_4:50081629-50081648 None:intergenic 45.0%
TTGTCTGATTCCATAGGCAG+AGG + chr4_4:50081652-50081671 None:intergenic 45.0%
TCTGCCTATGGAATCAGACA+AGG - chr4_4:50081651-50081670 Msa0685810:intron 45.0%
TTATGTAGCAACCCACATGG+AGG - chr4_4:50081797-50081816 Msa0685810:CDS 45.0%
CCTCCATTGGTATGGCTTGA+AGG + chr4_4:50077124-50077143 None:intergenic 50.0%
CCTTCAAGCCATACCAATGG+AGG - chr4_4:50077121-50077140 Msa0685810:three_prime_UTR 50.0%
GTGACTGAGAAAGCCTCCAT+TGG + chr4_4:50077137-50077156 None:intergenic 50.0%
AGAGGAGGGAATGGTAGTTG+AGG + chr4_4:50077159-50077178 None:intergenic 50.0%
ACGTGTTAGAGAGGAGGGAA+TGG + chr4_4:50077168-50077187 None:intergenic 50.0%
CTCTCTACGTGTTAGAGAGG+AGG + chr4_4:50077174-50077193 None:intergenic 50.0%
CTCCTCTCTAACACGTAGAG+AGG - chr4_4:50077172-50077191 Msa0685810:three_prime_UTR 50.0%
AGCCTCTCTACGTGTTAGAG+AGG + chr4_4:50077177-50077196 None:intergenic 50.0%
GCTGCAGCAGTTAAACCTTC+TGG - chr4_4:50077194-50077213 Msa0685810:three_prime_UTR 50.0%
GAAAGGTTGACATGGCCAGA+AGG + chr4_4:50077212-50077231 None:intergenic 50.0%
!! CTGGAAGGTGTTGTGGTGAA+AGG + chr4_4:50077260-50077279 None:intergenic 50.0%
CTTTCACCACAACACCTTCC+AGG - chr4_4:50077258-50077277 Msa0685810:three_prime_UTR 50.0%
!! TCTACTCCTGGAAGGTGTTG+TGG + chr4_4:50077267-50077286 None:intergenic 50.0%
CTACGGATTCTACTCCTGGA+AGG + chr4_4:50077275-50077294 None:intergenic 50.0%
CTGAGCTTATGCCTGGTTGT+TGG + chr4_4:50077853-50077872 None:intergenic 50.0%
CAACAACCAGGCATAAGCTC+AGG - chr4_4:50077851-50077870 Msa0685810:CDS 50.0%
AGCTATCCTGAGCTTATGCC+TGG + chr4_4:50077860-50077879 None:intergenic 50.0%
TTCCTTCTCACTGGCACCAA+TGG + chr4_4:50078318-50078337 None:intergenic 50.0%
! GGGGAGTCTTGTGTTGGAAA+AGG - chr4_4:50078666-50078685 Msa0685810:intron 50.0%
TGTCAATGGCGCAGTTGTCT+CGG + chr4_4:50079091-50079110 None:intergenic 50.0%
!! GGAATGTAAGGGCGTTGAGA+AGG + chr4_4:50079141-50079160 None:intergenic 50.0%
CCTTGGGCGAAGGAATGTAA+GGG + chr4_4:50079152-50079171 None:intergenic 50.0%
ACCTTGGGCGAAGGAATGTA+AGG + chr4_4:50079153-50079172 None:intergenic 50.0%
! GAAGTACTTACCTTGGGCGA+AGG + chr4_4:50079162-50079181 None:intergenic 50.0%
CTACTGACAGCTGCAGTATC+TGG + chr4_4:50079284-50079303 None:intergenic 50.0%
!!! GGCTGTTTTGCCACTGGTTT+CGG + chr4_4:50079428-50079447 None:intergenic 50.0%
AAAGCGGCTTACGCTGCAAA+AGG + chr4_4:50079734-50079753 None:intergenic 50.0%
ATCCACATCTTCTGTGGGTG+AGG - chr4_4:50080001-50080020 Msa0685810:CDS 50.0%
! GTGGTCTTGACTTTGGCTCA+TGG + chr4_4:50080109-50080128 None:intergenic 50.0%
GGATGGTGAGATAGCTGTTC+AGG - chr4_4:50080227-50080246 Msa0685810:intron 50.0%
TGGTGTGGCGACATTGATGT+AGG + chr4_4:50080628-50080647 None:intergenic 50.0%
CACATCAAGGCCAACTCACT+AGG + chr4_4:50080755-50080774 None:intergenic 50.0%
!! CTAGTGAGTTGGCCTTGATG+TGG - chr4_4:50080753-50080772 Msa0685810:CDS 50.0%
TACACCAAAGGAGGATGGAC+AGG - chr4_4:50081301-50081320 Msa0685810:intron 50.0%
AGATCCTGTCCATCCTCCTT+TGG + chr4_4:50081308-50081327 None:intergenic 50.0%
TGCAGGATTCCTTGACCTTG+GGG + chr4_4:50081466-50081485 None:intergenic 50.0%
CTGCAGGATTCCTTGACCTT+GGG + chr4_4:50081467-50081486 None:intergenic 50.0%
ACTGCAGGATTCCTTGACCT+TGG + chr4_4:50081468-50081487 None:intergenic 50.0%
CAGTCATGCAGTCACTGCAT+TGG - chr4_4:50081484-50081503 Msa0685810:intron 50.0%
! AAGGAAGGTGATGGTGATGC+AGG + chr4_4:50081610-50081629 None:intergenic 50.0%
!! GCTGGTGCTACCGGAAAAGT+TGG - chr4_4:50077472-50077491 Msa0685810:intron 55.0%
!! GTAAGGAGTGCTCAGAGAGC+TGG - chr4_4:50077642-50077661 Msa0685810:intron 55.0%
TGCTCAGAGAGCTGGTGCAT+TGG - chr4_4:50077650-50077669 Msa0685810:intron 55.0%
!! GAGAGCTGGTGCATTGGTTC+AGG - chr4_4:50077656-50077675 Msa0685810:intron 55.0%
GGTACAAGTGGAGGGAGTGA+AGG - chr4_4:50078126-50078145 Msa0685810:intron 55.0%
!! CACCATTGGTGCCAGTGAGA+AGG - chr4_4:50078313-50078332 Msa0685810:intron 55.0%
GATAGTGAGACCTGGAGGCA+TGG - chr4_4:50078819-50078838 Msa0685810:intron 55.0%
TGCTGAACTCATGGCAGCCA+TGG - chr4_4:50079020-50079039 Msa0685810:CDS 55.0%
CCCTTACATTCCTTCGCCCA+AGG - chr4_4:50079149-50079168 Msa0685810:intron 55.0%
TGTCAGTAGTCCAGCTCCCT+CGG - chr4_4:50079295-50079314 Msa0685810:intron 55.0%
AGCTCCCTCGGCTAATGTCA+CGG - chr4_4:50079307-50079326 Msa0685810:intron 55.0%
GCTTCCGTGACATTAGCCGA+GGG + chr4_4:50079314-50079333 None:intergenic 55.0%
TGCTTCCGTGACATTAGCCG+AGG + chr4_4:50079315-50079334 None:intergenic 55.0%
ATGCTAGGCACTTCTGCCAC+TGG + chr4_4:50079380-50079399 None:intergenic 55.0%
!! GAAAGCGGCTGTTTTGCCAC+TGG + chr4_4:50079434-50079453 None:intergenic 55.0%
CACCTCACCCACAGAAGATG+TGG + chr4_4:50080006-50080025 None:intergenic 55.0%
CACATCTTCTGTGGGTGAGG+TGG - chr4_4:50080004-50080023 Msa0685810:CDS 55.0%
TGGCCCAGCTCAACTTTCAG+TGG - chr4_4:50080052-50080071 Msa0685810:intron 55.0%
TTCAGTGGAAGACACCCCAC+AGG - chr4_4:50080067-50080086 Msa0685810:intron 55.0%
GAAGACACCCCACAGGATGA+TGG - chr4_4:50080074-50080093 Msa0685810:intron 55.0%
TCTTCCACTGAGAGTTGGGC+TGG + chr4_4:50081281-50081300 None:intergenic 55.0%
TGCAGTGACTGCATGACTGC+AGG + chr4_4:50081483-50081502 None:intergenic 55.0%
! GAAGGTGATGGTGATGCAGG+AGG + chr4_4:50081607-50081626 None:intergenic 55.0%
CATAGGCAGAGGCAGTTCCT+AGG + chr4_4:50081641-50081660 None:intergenic 55.0%
CTAGGAACTGCCTCTGCCTA+TGG - chr4_4:50081639-50081658 Msa0685810:intron 55.0%
ATTACACCGAAGCGCAGCGC+AGG - chr4_4:50078750-50078769 Msa0685810:intron 60.0%
TTACACCGAAGCGCAGCGCA+GGG - chr4_4:50078751-50078770 Msa0685810:intron 60.0%
! TGAGACCTGGAGGCATGGAG+AGG - chr4_4:50078824-50078843 Msa0685810:intron 60.0%
GTGACATTAGCCGAGGGAGC+TGG + chr4_4:50079308-50079327 None:intergenic 60.0%
!! GGCACTTCTGCCACTGGTTC+TGG + chr4_4:50079374-50079393 None:intergenic 60.0%
! ACTGGAGAAGGGGATGACGG+TGG + chr4_4:50079572-50079591 None:intergenic 60.0%
GGGTGAGGTGGCCAAGATTG+AGG - chr4_4:50080016-50080035 Msa0685810:CDS 60.0%
TGGACCAGCCCAACTCTCAG+TGG - chr4_4:50081274-50081293 Msa0685810:intron 60.0%
TAGGACCCTGCGCTGCGCTT+CGG + chr4_4:50078759-50078778 None:intergenic 65.0%
GTAGGCCTCTCCATGCCTCC+AGG + chr4_4:50078832-50078851 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 50076960 50082105 50076960 ID=Msa0685810;Name=Msa0685810
chr4_4 mRNA 50076960 50082105 50076960 ID=Msa0685810-mRNA-1;Parent=Msa0685810;Name=Msa0685810-mRNA-1;_AED=0.12;_eAED=0.12;_QI=177|1|1|1|0.86|0.81|16|321|650
chr4_4 exon 50076960 50077068 50076960 ID=Msa0685810-mRNA-1:exon:12721;Parent=Msa0685810-mRNA-1
chr4_4 exon 50077106 50077287 50077106 ID=Msa0685810-mRNA-1:exon:12720;Parent=Msa0685810-mRNA-1
chr4_4 exon 50077393 50077477 50077393 ID=Msa0685810-mRNA-1:exon:12719;Parent=Msa0685810-mRNA-1
chr4_4 exon 50077699 50078013 50077699 ID=Msa0685810-mRNA-1:exon:12718;Parent=Msa0685810-mRNA-1
chr4_4 exon 50078921 50079121 50078921 ID=Msa0685810-mRNA-1:exon:12717;Parent=Msa0685810-mRNA-1
chr4_4 exon 50079324 50079512 50079324 ID=Msa0685810-mRNA-1:exon:12716;Parent=Msa0685810-mRNA-1
chr4_4 exon 50079600 50079793 50079600 ID=Msa0685810-mRNA-1:exon:12715;Parent=Msa0685810-mRNA-1
chr4_4 exon 50079895 50080047 50079895 ID=Msa0685810-mRNA-1:exon:12714;Parent=Msa0685810-mRNA-1
chr4_4 exon 50080135 50080245 50080135 ID=Msa0685810-mRNA-1:exon:12713;Parent=Msa0685810-mRNA-1
chr4_4 exon 50080335 50080407 50080335 ID=Msa0685810-mRNA-1:exon:12712;Parent=Msa0685810-mRNA-1
chr4_4 exon 50080486 50080567 50080486 ID=Msa0685810-mRNA-1:exon:12711;Parent=Msa0685810-mRNA-1
chr4_4 exon 50080664 50080840 50080664 ID=Msa0685810-mRNA-1:exon:12710;Parent=Msa0685810-mRNA-1
chr4_4 exon 50080918 50080963 50080918 ID=Msa0685810-mRNA-1:exon:12709;Parent=Msa0685810-mRNA-1
chr4_4 exon 50081388 50081460 50081388 ID=Msa0685810-mRNA-1:exon:12708;Parent=Msa0685810-mRNA-1
chr4_4 exon 50081556 50081655 50081556 ID=Msa0685810-mRNA-1:exon:12707;Parent=Msa0685810-mRNA-1
chr4_4 exon 50081745 50082105 50081745 ID=Msa0685810-mRNA-1:exon:12706;Parent=Msa0685810-mRNA-1
chr4_4 five_prime_UTR 50081929 50082105 50081929 ID=Msa0685810-mRNA-1:five_prime_utr;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50081745 50081928 50081745 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50081556 50081655 50081556 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50081388 50081460 50081388 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50080918 50080963 50080918 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50080664 50080840 50080664 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50080486 50080567 50080486 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50080335 50080407 50080335 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50080135 50080245 50080135 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50079895 50080047 50079895 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50079600 50079793 50079600 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50079324 50079512 50079324 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50078921 50079121 50078921 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50077699 50078013 50077699 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 CDS 50077423 50077477 50077423 ID=Msa0685810-mRNA-1:cds;Parent=Msa0685810-mRNA-1
chr4_4 three_prime_UTR 50077393 50077422 50077393 ID=Msa0685810-mRNA-1:three_prime_utr;Parent=Msa0685810-mRNA-1
chr4_4 three_prime_UTR 50077106 50077287 50077106 ID=Msa0685810-mRNA-1:three_prime_utr;Parent=Msa0685810-mRNA-1
chr4_4 three_prime_UTR 50076960 50077068 50076960 ID=Msa0685810-mRNA-1:three_prime_utr;Parent=Msa0685810-mRNA-1
Gene Sequence

>Msa0685810

ATGGAGGCTTTCTCAGTCACCTCAACTACCATTCCCTCCTCTCTAACACGTAGAGAGGCTGCAGCAGTTAAACCTTCTGGCCATGTCAACCTTTCCAAGTACTCACATTTCATGAACTACCCTTTCACCACAACACCTTCCAGGAGTAGAATCCGTAGCAATATCATAAGAGCTCAAGTTTCAGGTTCAACAAAATCTAGTACTGCTGAGAAAAAAGATTCCAAGGATGATAACTTAGTATTTGTTGCTGGTGCTACCGGAAAAGTTGGTTCAAGAACAGTCAGGGAGCTTATAAAGCTTGGTTTTGAAGTCAGAGCTGGAGTAAGGAGTGCTCAGAGAGCTGGTGCATTGGTTCAGAGTGTTAAACAATTGAAGCTTGATGGTACAAGTGGAGGGAGTGAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAGCCAGAACAGATTGGATCAGCATTAGGGAATGCATCAAAGGTGATATGCACCATTGGTGCCAGTGAGAAGGAAATTTTCGACATTACCGGACCTTATCGAATAGATTACATGGCCACCAAAAACCTAGTTGATGCTGCATCTGTTGCCAAAGTAAATCACTTCATATTGGTTACTTCACTGGGAACAAACAAATTTGGTTTTCCTGCAGCTATTCTCAATTTATTTTGGGGAGTCTTGTGTTGGAAAAGGAAGGCAGAAGAAGCATTGCTAGCAAGTGGACTTCCATACACAATAGTGAGACCTGGAGGCATGGAGAGGCCTACTGATGCTTACAAGCAAACTCATAATGTAACCCTATCAACTGAAGATACTTTGTTTGGTGGTCAAGTGTCAAACCTTCAGGTTGCTGAACTCATGGCAGCCATGGCTAAGAATCCCGAACTTTCATATTGTAAAATAGTGGAGGTCATTGCCGAGACAACTGCGCCATTGACACCTGCAGAAAAACTTCTTGCAAAGATACCTTCTCAACGCCCTTACATTCCTTCGCCCAAGGTACAGGAACCAGATACTGCAGCTGTCAGTAGTCCAGCTCCCTCGGCTAATGTCACGGAAGCAGTACCTAGTATTTCCCCTCAGAAAGAAACAGAACAACCAGAACCAGTGGCAGAAGTGCCTAGCATTACTCCTCAGAAAGTAACAGAACAACCGAAACCAGTGGCAAAACAGCCGCTTTCTCCTTATACTGCTTATGATGATTTAAAACCACCGTCATCCCCTTCTCCAGTTAAGCCTAGTGACAAGAAACAGATAAATATCAGTGATGCAGTGCCAACACCTAGTTCTTCAGATGCTCCAAGTAACATTCCAGAAATAGATGTCATTTCTCAGACAACAACTTCCTCAAAAGGGAAGGAGTCTCTTTCTCCTTTTGCAGCATATCCTGATTTAAAGCCTCCTAGTTCACCATCTCCTAATGCACCAACTACATCAATATCCACATCTTCTGTGGGTGAGGTGGCCAAGATTGAGGAAGTATCAAGTAATGGCCCAGCTCAACTTTCAGTGGAAGACACCCCACAGGATGATGGACAGAATCTCCATGAGCCAAAGTCAAGACCACTTTCACCTTATGCAATGTATCCTGATTTAAAGCCTCCTAGTTCACCATCTCCTAATGCACCAAATACATCTTCTGTGTGTTCGGTGCCCAATATTGATGCAGTATCAACATCTTCTGTGGGTGGGGTGCCCAATACTGATGCAGTATCCATATCTTCTGTGAGTGAGGTGCCCAATATTGATGCAGTATCAACATCTTCTGTGGGTGGGGTGCCCAATATTGATGCAGTATCAAGCAATGGACCAGCCCAACTCTCAGTGGAAGATACACCAAAGGAGGATGGACAGGATCTCCATGAACCAAAGTCAAGACCACTTTCACCTTTTGCAATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTCCTTCAGACAATCCTAG
Protein sequence

>Msa0685810

MEAFSVTSTTIPSSLTRREAAAVKPSGHVNLSKYSHFMNYPFTTTPSRSRIRSNIIRAQVSGSTKSSTAEKKDSKDDNLVFVAGATGKVGSRTVRELIKLGFEVRAGVRSAQRAGALVQSVKQLKLDGTSGGSEAVEKLEIVECDLEKPEQIGSALGNASKVICTIGASEKEIFDITGPYRIDYMATKNLVDAASVAKVNHFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALLASGLPYTIVRPGGMERPTDAYKQTHNVTLSTEDTLFGGQVSNLQVAELMAAMAKNPELSYCKIVEVIAETTAPLTPAEKLLAKIPSQRPYIPSPKVQEPDTAAVSSPAPSANVTEAVPSISPQKETEQPEPVAEVPSITPQKVTEQPKPVAKQPLSPYTAYDDLKPPSSPSPVKPSDKKQINISDAVPTPSSSDAPSNIPEIDVISQTTTSSKGKESLSPFAAYPDLKPPSSPSPNAPTTSISTSSVGEVAKIEEVSSNGPAQLSVEDTPQDDGQNLHEPKSRPLSPYAMYPDLKPPSSPSPNAPNTSSVCSVPNIDAVSTSSVGGVPNTDAVSISSVSEVPNIDAVSTSSVGGVPNIDAVSSNGPAQLSVEDTPKEDGQDLHEPKSRPLSPFAMYEDLKPPASPSPSFRQS*