AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0805320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805320 MtrunA17_Chr5g0413181 98.649 148 2 0 121 268 1 148 4.13e-105 301
Msa0805320 MtrunA17_Chr5g0413191 98.000 100 2 0 11 110 7 106 4.13e-70 213
Msa0805320 MtrunA17_Chr4g0003041 30.290 241 139 7 53 268 49 285 6.09e-22 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805320 AT1G23360.1 67.511 237 69 2 38 266 23 259 1.23e-113 327
Msa0805320 AT1G23360.2 64.557 158 54 1 111 266 1 158 8.82e-70 213
Msa0805320 AT1G23360.3 64.557 158 54 1 111 266 1 158 8.82e-70 213
Msa0805320 AT5G57300.3 27.731 238 142 4 53 263 48 282 1.80e-21 91.7
Msa0805320 AT5G57300.1 27.731 238 142 4 53 263 48 282 1.80e-21 91.7
Msa0805320 AT5G57300.4 27.731 238 142 4 53 263 48 282 1.80e-21 91.7
Msa0805320 AT5G57300.2 27.731 238 142 4 53 263 48 282 1.80e-21 91.7

Find 113 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATGTACACTTCAATTA+TGG 0.127610 5_3:+21824108 None:intergenic
GTCCCTGTAGCCTCTGTTTA+TGG 0.157587 5_3:-21824789 Msa0805320:CDS
TTGTTGTGCATCTCTATATT+TGG 0.223777 5_3:-21823694 Msa0805320:three_prime_UTR
AACAAGATGCTCTTCATTCT+TGG 0.256604 5_3:-21823830 Msa0805320:three_prime_UTR
GCTACTAACTTCTTCATTTA+CGG 0.259722 5_3:-21825002 Msa0805320:intron
CTGCCGTGCCGCAAGTAAAT+TGG 0.292364 5_3:+21824027 None:intergenic
CAGGGGAGGTAGGAATTTAT+TGG 0.302595 5_3:+21824407 None:intergenic
GCTTGGGTCAGCACCGGATT+TGG 0.335534 5_3:-21826773 Msa0805320:CDS
CCATAATTGAAGTGTACATT+TGG 0.335813 5_3:-21824108 Msa0805320:three_prime_UTR
CTAAACATTAGATGACATTT+AGG 0.336469 5_3:-21824445 Msa0805320:exon
TCTGCATTTCCATGGTTACC+TGG 0.340244 5_3:-21823977 Msa0805320:three_prime_UTR
GGAAGCGAATGGCTGTTTCT+TGG 0.344170 5_3:-21826752 Msa0805320:CDS
TATATTTATACAGCCTGAAC+AGG 0.347158 5_3:+21824388 None:intergenic
CAAATGTACACTTCAATTAT+GGG 0.351495 5_3:+21824109 None:intergenic
GCTGAATGATTTGCTGAGCT+TGG 0.375216 5_3:-21826790 Msa0805320:CDS
TTCAGACAGTTTAGTTATAG+TGG 0.384924 5_3:+21823530 Msa0805310:CDS
ATCTAAGAAAGGTGGATTAG+AGG 0.385634 5_3:-21823857 Msa0805320:three_prime_UTR
AATTCCTACCTCCCCTGTTC+AGG 0.389107 5_3:-21824401 Msa0805320:three_prime_UTR
GAGAAACTTGCTTTAGAAGT+AGG 0.398667 5_3:-21824524 Msa0805320:CDS
AGTAATGTACTCTATATTCC+TGG 0.401752 5_3:+21823370 Msa0805310:intron
TAATTCTATTTGCAGTTTCA+AGG 0.402300 5_3:-21824295 Msa0805320:three_prime_UTR
CAGCCATTCGCTTCCAAATC+CGG 0.402703 5_3:+21826760 None:intergenic
TGGAGGCCTCATGGGGTGCT+TGG 0.422234 5_3:-21824471 Msa0805320:CDS
CTGTGATGCAGGGAAGGAAT+TGG 0.426333 5_3:-21824546 Msa0805320:intron
CTCTATATTCCTGGATCTGA+AGG 0.428924 5_3:+21823379 Msa0805310:intron
TTGGTTTGATGCAATCACTA+TGG 0.429752 5_3:-21825214 Msa0805320:CDS
TTACTGCTAGAGATAGTTAC+TGG 0.433935 5_3:+21823474 Msa0805310:CDS
TTTCTCAAAGGAGCAACTAA+TGG 0.435316 5_3:-21825579 Msa0805320:CDS
GTCGCAATGAAGCGACCTCT+TGG 0.443714 5_3:-21823777 Msa0805320:three_prime_UTR
GAGATCGGTGGAGGCCTCAT+GGG 0.444479 5_3:-21824479 Msa0805320:CDS
AAGGCAGACGTATATAGTTT+CGG 0.446072 5_3:+21823447 Msa0805310:CDS
CTGAATGATTTGCTGAGCTT+GGG 0.456434 5_3:-21826789 Msa0805320:CDS
AGAATTAACAGCAGAATGTC+AGG 0.456779 5_3:+21824311 None:intergenic
GCAAGTAAATTGGCTTGGCC+CGG 0.467468 5_3:+21824037 None:intergenic
ATGGAAGTCGGTCGGAATGA+AGG 0.467617 5_3:+21826948 None:intergenic
TTATTTGCTCTGCATTTCCA+TGG 0.471072 5_3:-21823985 Msa0805320:three_prime_UTR
TCTGTAGTAAATGCTAATCA+TGG 0.471302 5_3:-21824158 Msa0805320:three_prime_UTR
TGCTGAGCTTGGGTCAGCAC+CGG 0.478547 5_3:-21826779 Msa0805320:CDS
GTACATCCTAGGTGGGTTGA+AGG 0.482364 5_3:-21825267 Msa0805320:intron
CAAGTAAATTGGCTTGGCCC+GGG 0.484005 5_3:+21824038 None:intergenic
AGTTATGAGCTGCTACATAT+CGG 0.488938 5_3:-21824193 Msa0805320:three_prime_UTR
TTACTGGAAGACAGAACAAC+AGG 0.492566 5_3:+21823490 Msa0805310:CDS
TTGTGTTGCAGAGATGTTCC+CGG 0.492822 5_3:-21826985 Msa0805320:CDS
AACCTTCAGTGTCATAATCC+CGG 0.495200 5_3:-21824056 Msa0805320:three_prime_UTR
CTGCATTTCCATGGTTACCT+GGG 0.502516 5_3:-21823976 Msa0805320:three_prime_UTR
TGAGATCGGTGGAGGCCTCA+TGG 0.504020 5_3:-21824480 Msa0805320:CDS
GAAAAGCGCCTGTCGGTCGT+TGG 0.508235 5_3:+21826917 None:intergenic
AAATGTACTCCAATTTAAAA+CGG 0.509621 5_3:-21827058 Msa0805320:CDS
ATTTGGATCGAACAACTGTT+CGG 0.512715 5_3:-21823677 Msa0805320:three_prime_UTR
AGGCCATAAACAGAGGCTAC+AGG 0.514026 5_3:+21824786 None:intergenic
TTGGATGTCTGCTGTGGAAG+TGG 0.515717 5_3:-21826615 Msa0805320:CDS
AAGGATAAGGAGCAACCGCC+GGG 0.515863 5_3:+21826967 None:intergenic
TGGTTTGATGCAATCACTAT+GGG 0.517163 5_3:-21825213 Msa0805320:CDS
GTGCCGCAAGTAAATTGGCT+TGG 0.519475 5_3:+21824032 None:intergenic
TCAAACCAAGCATCAGAAAA+CGG 0.523537 5_3:+21825228 None:intergenic
TCGCTGCTCCAACGACCGAC+AGG 0.524223 5_3:-21826925 Msa0805320:CDS
TCTAAGAAAGGTGGATTAGA+GGG 0.525624 5_3:-21823856 Msa0805320:three_prime_UTR
TGTAACGCCTTTGACATAGT+TGG 0.526764 5_3:-21823799 Msa0805320:three_prime_UTR
TCATGGTCAGTTAACAGAAA+AGG 0.527359 5_3:+21823428 Msa0805310:CDS
CGACATTATGAGATCGGTGG+AGG 0.533048 5_3:-21824488 Msa0805320:CDS
GTCGGTCGGAATGAAGGATA+AGG 0.536675 5_3:+21826954 None:intergenic
ACCTTCAGTGTCATAATCCC+GGG 0.536699 5_3:-21824055 Msa0805320:three_prime_UTR
TGACCATGAGCAAGATACTC+TGG 0.539266 5_3:-21823414 Msa0805320:three_prime_UTR
CAAATAGCTCTTTCTATCCC+AGG 0.541260 5_3:+21823959 Msa0805310:CDS
ATGGTACTCTCATCTAAGAA+AGG 0.546299 5_3:-21823868 Msa0805320:three_prime_UTR
GATGCAATCACTATGGGCTA+TGG 0.547081 5_3:-21825207 Msa0805320:CDS
AACTTTGTTAGACAAGAGAA+AGG 0.551476 5_3:+21826584 None:intergenic
CTTTGAAAGCGACCGTGATG+AGG 0.553016 5_3:+21825553 None:intergenic
ATGGGTCGCCACTTGTGTCA+TGG 0.554397 5_3:-21823897 Msa0805320:three_prime_UTR
AAGTCATACGAAAACATGAC+TGG 0.557528 5_3:+21824265 None:intergenic
CTTTCTATCCCAGGTAACCA+TGG 0.559485 5_3:+21823968 Msa0805310:exon
TATTCTTAACATCGCTATTG+CGG 0.566965 5_3:-21823717 Msa0805320:three_prime_UTR
GAAGGATAAGGAGCAACCGC+CGG 0.567694 5_3:+21826966 None:intergenic
TGATAAGCGTAAAGCCATGC+AGG 0.572450 5_3:-21825169 Msa0805320:CDS
AAGCCAATTTACTTGCGGCA+CGG 0.573110 5_3:-21824030 Msa0805320:three_prime_UTR
GATATTTGTAGTCATCTGAA+AGG 0.577823 5_3:+21824766 None:intergenic
GCTCCAGAGTATCTTGCTCA+TGG 0.581564 5_3:+21823411 Msa0805310:CDS
TCGGTCGTTGGAGCAGCGAA+TGG 0.583040 5_3:+21826929 None:intergenic
GGCCATAAACAGAGGCTACA+GGG 0.586319 5_3:+21824787 None:intergenic
CACACGTAAAATTTCCTGCA+TGG 0.586402 5_3:+21825155 None:intergenic
CATTATAAACAAATGAAGCA+TGG 0.588493 5_3:-21824345 Msa0805320:three_prime_UTR
CTATATTCCTGGATCTGAAG+GGG 0.589192 5_3:+21823381 Msa0805310:intron
TCTATATTCCTGGATCTGAA+GGG 0.593029 5_3:+21823380 Msa0805310:intron
GCCCGGGATTATGACACTGA+AGG 0.594351 5_3:+21824054 None:intergenic
ACTGCTCGACATTATGAGAT+CGG 0.594791 5_3:-21824494 Msa0805320:CDS
ACAGCCTGAACAGGGGAGGT+AGG 0.595555 5_3:+21824397 None:intergenic
ACTTGTGTCATGGAGCTCCA+TGG 0.596168 5_3:-21823887 Msa0805320:three_prime_UTR
GATTGGTCTTGATTTCTCAA+AGG 0.599953 5_3:-21825591 Msa0805320:CDS
ATATTTATACAGCCTGAACA+GGG 0.603256 5_3:+21824389 None:intergenic
ATTGCGACCAACTATGTCAA+AGG 0.606405 5_3:+21823792 Msa0805310:CDS
GGGCCAAGCCAATTTACTTG+CGG 0.608342 5_3:-21824035 Msa0805320:three_prime_UTR
GTACTCTCATCTAAGAAAGG+TGG 0.608348 5_3:-21823865 Msa0805320:three_prime_UTR
GCACCGGATTTGGAAGCGAA+TGG 0.615773 5_3:-21826763 Msa0805320:CDS
TGCGGTTGAAAAGCGCCTGT+CGG 0.616608 5_3:+21826910 None:intergenic
AGATCGGTGGAGGCCTCATG+GGG 0.618606 5_3:-21824478 Msa0805320:CDS
AACTAATGGTCGCCTCATCA+CGG 0.620553 5_3:-21825565 Msa0805320:CDS
CAGAAACTGATAAAATGCAA+TGG 0.628021 5_3:-21824083 Msa0805320:three_prime_UTR
TTGGAGCAGCGAATGGAAGT+CGG 0.628117 5_3:+21826936 None:intergenic
CGTGTATTGGATGTCTGCTG+TGG 0.636133 5_3:-21826621 Msa0805320:CDS
CACAGCAGACATCCAATACA+CGG 0.640805 5_3:+21826622 None:intergenic
TTTCTTAGATGAGAGTACCA+TGG 0.647966 5_3:+21823870 Msa0805310:CDS
ATGGAGCTCCATGACACAAG+TGG 0.648286 5_3:+21823889 Msa0805310:CDS
TGTACTCCAATTTAAAACGG+CGG 0.650494 5_3:-21827055 Msa0805320:CDS
AGCAGCGAATGGAAGTCGGT+CGG 0.656578 5_3:+21826940 None:intergenic
ATCTGAAAGGCCATAAACAG+AGG 0.659783 5_3:+21824779 None:intergenic
TATATTCCTGGATCTGAAGG+GGG 0.664501 5_3:+21823382 Msa0805310:intron
GCTCGACATTATGAGATCGG+TGG 0.666601 5_3:-21824491 Msa0805320:CDS
TTATACAGCCTGAACAGGGG+AGG 0.672102 5_3:+21824393 None:intergenic
TATTTATACAGCCTGAACAG+GGG 0.674103 5_3:+21824390 None:intergenic
TAGCTACCAAGCACCCCATG+AGG 0.708176 5_3:+21824465 None:intergenic
AGGACTTCTATGCATCCAAG+AGG 0.711075 5_3:+21823762 Msa0805310:CDS
TATCATAGACAGGAGCAATG+CGG 0.761354 5_3:+21826892 None:intergenic
TGTTGCAGAGATGTTCCCGG+CGG 0.792432 5_3:-21826982 Msa0805320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATTTTTCAAAAAAAAAA+AGG + chr5_3:21824071-21824090 None:intergenic 10.0%
!! ATACTAATGTATAGTATAAT+AGG - chr5_3:21825134-21825153 Msa0805320:intron 15.0%
!! TACTAATGTATAGTATAATA+GGG - chr5_3:21825135-21825154 Msa0805320:intron 15.0%
!!! ATTTTTTTTATAGTAGTAAG+AGG - chr5_3:21825801-21825820 Msa0805320:intron 15.0%
!! ATCATTTCATTCTATTCTAA+TGG - chr5_3:21823740-21823759 Msa0805320:three_prime_UTR 20.0%
!! ATAATATTGCAAAAATGAGT+TGG + chr5_3:21824097-21824116 None:intergenic 20.0%
!!! TCATTTTTGCAATATTATGT+TGG - chr5_3:21824099-21824118 Msa0805320:three_prime_UTR 20.0%
!! TAAAATAGTTAAATGAGACA+TGG - chr5_3:21824131-21824150 Msa0805320:three_prime_UTR 20.0%
!! ATATAATTAATGTGTTGTGA+AGG - chr5_3:21824164-21824183 Msa0805320:three_prime_UTR 20.0%
!! TATAATTAATGTGTTGTGAA+GGG - chr5_3:21824165-21824184 Msa0805320:three_prime_UTR 20.0%
!!! TAAGCAAAAAATCACTTTTT+AGG - chr5_3:21824297-21824316 Msa0805320:three_prime_UTR 20.0%
!! TATTATAGACCAAATACAAT+AGG - chr5_3:21824349-21824368 Msa0805320:three_prime_UTR 20.0%
!!! TAAGCAAAAAAACACTTTTT+AGG + chr5_3:21824386-21824405 None:intergenic 20.0%
!! GTTAATGTATCTTGAATAAT+CGG + chr5_3:21824721-21824740 None:intergenic 20.0%
!! TTATTCAAGATACATTAACA+TGG - chr5_3:21824722-21824741 Msa0805320:intron 20.0%
!!! TTAGTGTTTTAGCTTTATAA+CGG + chr5_3:21825046-21825065 None:intergenic 20.0%
!! ATACTATACATTAGTATCAT+TGG + chr5_3:21825131-21825150 None:intergenic 20.0%
!!! TCAATAAGAGAATTTTTAAC+AGG - chr5_3:21825705-21825724 Msa0805320:intron 20.0%
! TTGATTGTTGTGTTTGAATT+TGG - chr5_3:21823774-21823793 Msa0805320:three_prime_UTR 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr5_3:21824396-21824415 None:intergenic 25.0%
! CATTCAACACTTAATGTATT+TGG - chr5_3:21824322-21824341 Msa0805320:three_prime_UTR 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr5_3:21824396-21824415 Msa0805320:three_prime_UTR 25.0%
!! AAGCTTTATAAACACTACAT+AGG + chr5_3:21824498-21824517 None:intergenic 25.0%
!! CAGCTTTATAAACACTAAAT+AGG + chr5_3:21824646-21824665 None:intergenic 25.0%
! ATCGGTTAATTGTTTAAATG+CGG + chr5_3:21824703-21824722 None:intergenic 25.0%
! AAGTTGTACATTAGTATCAT+TGG - chr5_3:21825092-21825111 Msa0805320:intron 25.0%
! TTTAATCATTTGTACATCCT+AGG - chr5_3:21825162-21825181 Msa0805320:CDS 25.0%
! CAAGTCAATAACATATTGAT+TGG - chr5_3:21825333-21825352 Msa0805320:intron 25.0%
!!! CATTGCTTTTATTAAAGTCA+AGG + chr5_3:21825417-21825436 None:intergenic 25.0%
!!! TTTGTTTTCAATTGAACTGA+AGG - chr5_3:21825728-21825747 Msa0805320:intron 25.0%
! CTAAACATTAGATGACATTT+AGG - chr5_3:21825995-21826014 Msa0805320:intron 25.0%
! CATTATAAACAAATGAAGCA+TGG - chr5_3:21826095-21826114 Msa0805320:intron 25.0%
! TAATTCTATTTGCAGTTTCA+AGG - chr5_3:21826145-21826164 Msa0805320:intron 25.0%
! CAAATGTACACTTCAATTAT+GGG + chr5_3:21826334-21826353 None:intergenic 25.0%
!!! ATTTTAAGAGTGATTCACAT+AGG + chr5_3:21826701-21826720 None:intergenic 25.0%
!! ATTTAACCGCCGTTTTAAAT+TGG + chr5_3:21823394-21823413 Msa0805310:intron 30.0%
GAAAGAGAAAGAAAGAAGAA+GGG + chr5_3:21823581-21823600 Msa0805310:intron 30.0%
AGAAAGAGAAAGAAAGAAGA+AGG + chr5_3:21823582-21823601 Msa0805310:intron 30.0%
! ATTTGGTAACAGAGCAAAAA+AGG - chr5_3:21823791-21823810 Msa0805320:three_prime_UTR 30.0%
! TTTGGTAACAGAGCAAAAAA+GGG - chr5_3:21823792-21823811 Msa0805320:three_prime_UTR 30.0%
AACTTTGTTAGACAAGAGAA+AGG + chr5_3:21823859-21823878 Msa0805310:CDS 30.0%
TGTTGAAAAATATGTTGCCA+CGG - chr5_3:21823926-21823945 Msa0805320:three_prime_UTR 30.0%
TGGAATAAAATCGGGTTTAT+TGG - chr5_3:21824188-21824207 Msa0805320:three_prime_UTR 30.0%
CATTCAACACCTATTGTATT+TGG + chr5_3:21824361-21824380 None:intergenic 30.0%
AACCAACCCAAATTCTTTAT+CGG - chr5_3:21824559-21824578 Msa0805320:intron 30.0%
ACAAGACAACAAATCCTTTA+TGG - chr5_3:21824751-21824770 Msa0805320:CDS 30.0%
TGCAAACAAAATGTCCATAA+AGG + chr5_3:21824768-21824787 None:intergenic 30.0%
ATCCCAAAAGATTCACAAAA+CGG + chr5_3:21824823-21824842 None:intergenic 30.0%
TTCAATAATATTGAGTGAGC+AGG - chr5_3:21824916-21824935 Msa0805320:intron 30.0%
TCAATAATATTGAGTGAGCA+GGG - chr5_3:21824917-21824936 Msa0805320:intron 30.0%
TCTCTCGTAAAAATACTTTC+AGG + chr5_3:21824977-21824996 None:intergenic 30.0%
GCTACTAACTTCTTCATTTA+CGG - chr5_3:21825438-21825457 Msa0805320:intron 30.0%
GCAAAACATAAATGTTGCAA+GGG + chr5_3:21825468-21825487 None:intergenic 30.0%
GATATTTGTAGTCATCTGAA+AGG + chr5_3:21825677-21825696 None:intergenic 30.0%
!! CACAGGAGTATTATTAAGTT+AGG + chr5_3:21825879-21825898 None:intergenic 30.0%
ATATTTATACAGCCTGAACA+GGG + chr5_3:21826054-21826073 None:intergenic 30.0%
TATATTTATACAGCCTGAAC+AGG + chr5_3:21826055-21826074 None:intergenic 30.0%
TCTGTAGTAAATGCTAATCA+TGG - chr5_3:21826282-21826301 Msa0805320:intron 30.0%
CCAAATGTACACTTCAATTA+TGG + chr5_3:21826335-21826354 None:intergenic 30.0%
CCATAATTGAAGTGTACATT+TGG - chr5_3:21826332-21826351 Msa0805320:intron 30.0%
CAGAAACTGATAAAATGCAA+TGG - chr5_3:21826357-21826376 Msa0805320:intron 30.0%
TATTCTTAACATCGCTATTG+CGG - chr5_3:21826723-21826742 Msa0805320:intron 30.0%
TTGTTGTGCATCTCTATATT+TGG - chr5_3:21826746-21826765 Msa0805320:intron 30.0%
! AAATTTTGCAAGATCAGACA+TGG + chr5_3:21826811-21826830 None:intergenic 30.0%
! TTCTGATTGTTGTTCAACTA+AGG + chr5_3:21826863-21826882 None:intergenic 30.0%
TTCAGACAGTTTAGTTATAG+TGG + chr5_3:21826913-21826932 None:intergenic 30.0%
! TGTACTCCAATTTAAAACGG+CGG - chr5_3:21823385-21823404 Msa0805320:three_prime_UTR 35.0%
ATTCAGCTGCAACAATGAAA+AGG + chr5_3:21823637-21823656 Msa0805310:intron 35.0%
GTTGAAAAATATGTTGCCAC+GGG - chr5_3:21823927-21823946 Msa0805320:three_prime_UTR 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr5_3:21823971-21823990 Msa0805310:exon 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr5_3:21823970-21823989 Msa0805320:three_prime_UTR 35.0%
CAAAAAAAAAAAGGGCAACC+CGG + chr5_3:21824062-21824081 None:intergenic 35.0%
TAGTTAAATGAGACATGGTG+AGG - chr5_3:21824136-21824155 Msa0805320:three_prime_UTR 35.0%
AATTAATGTGTTGTGAAGGG+TGG - chr5_3:21824168-21824187 Msa0805320:three_prime_UTR 35.0%
TGTGAAGGGTGGAATAAAAT+CGG - chr5_3:21824179-21824198 Msa0805320:three_prime_UTR 35.0%
ATCCGATAAAGAATTTGGGT+TGG + chr5_3:21824564-21824583 None:intergenic 35.0%
TGGGATCCGATAAAGAATTT+GGG + chr5_3:21824568-21824587 None:intergenic 35.0%
TTGGGATCCGATAAAGAATT+TGG + chr5_3:21824569-21824588 None:intergenic 35.0%
! TCACCGTTTTGTGAATCTTT+TGG - chr5_3:21824817-21824836 Msa0805320:intron 35.0%
! CACCGTTTTGTGAATCTTTT+GGG - chr5_3:21824818-21824837 Msa0805320:intron 35.0%
!!! TTGTGAATCTTTTGGGATGT+AGG - chr5_3:21824825-21824844 Msa0805320:intron 35.0%
!! GATTGGTCTTGATTTCTCAA+AGG - chr5_3:21824849-21824868 Msa0805320:intron 35.0%
TTTCTCAAAGGAGCAACTAA+TGG - chr5_3:21824861-21824880 Msa0805320:intron 35.0%
CAATAATATTGAGTGAGCAG+GGG - chr5_3:21824918-21824937 Msa0805320:intron 35.0%
TCAGGCTGTTATCTAATTTC+AGG + chr5_3:21824959-21824978 None:intergenic 35.0%
!! TAGCTTTATAACGGAGAACA+TGG + chr5_3:21825037-21825056 None:intergenic 35.0%
AATCATTTGTACATCCTAGG+TGG - chr5_3:21825165-21825184 Msa0805320:CDS 35.0%
ATCATTTGTACATCCTAGGT+GGG - chr5_3:21825166-21825185 Msa0805320:CDS 35.0%
TCAAACCAAGCATCAGAAAA+CGG + chr5_3:21825215-21825234 None:intergenic 35.0%
! TTGGTTTGATGCAATCACTA+TGG - chr5_3:21825226-21825245 Msa0805320:CDS 35.0%
TGGTTTGATGCAATCACTAT+GGG - chr5_3:21825227-21825246 Msa0805320:CDS 35.0%
CGCAAAACATAAATGTTGCA+AGG + chr5_3:21825469-21825488 None:intergenic 35.0%
CCAAAGAATCAAAAAGACGA+AGG + chr5_3:21825571-21825590 None:intergenic 35.0%
!! CCTTCGTCTTTTTGATTCTT+TGG - chr5_3:21825568-21825587 Msa0805320:CDS 35.0%
!! TTTTGATTCTTTGGTGTGAG+CGG - chr5_3:21825577-21825596 Msa0805320:CDS 35.0%
TTATCCGATCAAGCGTAAAT+TGG - chr5_3:21825754-21825773 Msa0805320:intron 35.0%
TGTTCCAATTTACGCTTGAT+CGG + chr5_3:21825761-21825780 None:intergenic 35.0%
TAATAATACTCCTGTGATGC+AGG - chr5_3:21825883-21825902 Msa0805320:intron 35.0%
AATAATACTCCTGTGATGCA+GGG - chr5_3:21825884-21825903 Msa0805320:intron 35.0%
!! GAGAAACTTGCTTTAGAAGT+AGG - chr5_3:21825916-21825935 Msa0805320:intron 35.0%
TATTTATACAGCCTGAACAG+GGG + chr5_3:21826053-21826072 None:intergenic 35.0%
AGAATTAACAGCAGAATGTC+AGG + chr5_3:21826132-21826151 None:intergenic 35.0%
AAGTCATACGAAAACATGAC+TGG + chr5_3:21826178-21826197 None:intergenic 35.0%
AGTTATGAGCTGCTACATAT+CGG - chr5_3:21826247-21826266 Msa0805320:intron 35.0%
TTATTTGCTCTGCATTTCCA+TGG - chr5_3:21826455-21826474 Msa0805320:intron 35.0%
! CAACTGAATCATCTGTTTTG+AGG - chr5_3:21826513-21826532 Msa0805320:intron 35.0%
!!! TCTGTTTTGAGGAGGTAAAA+TGG - chr5_3:21826524-21826543 Msa0805320:intron 35.0%
!!! CTGTTTTGAGGAGGTAAAAT+GGG - chr5_3:21826525-21826544 Msa0805320:intron 35.0%
!! TTTCTTAGATGAGAGTACCA+TGG + chr5_3:21826573-21826592 None:intergenic 35.0%
ATGGTACTCTCATCTAAGAA+AGG - chr5_3:21826572-21826591 Msa0805320:intron 35.0%
!! ATCTAAGAAAGGTGGATTAG+AGG - chr5_3:21826583-21826602 Msa0805320:intron 35.0%
!! TCTAAGAAAGGTGGATTAGA+GGG - chr5_3:21826584-21826603 Msa0805320:intron 35.0%
AACAAGATGCTCTTCATTCT+TGG - chr5_3:21826610-21826629 Msa0805320:CDS 35.0%
ATTTGGATCGAACAACTGTT+CGG - chr5_3:21826763-21826782 Msa0805320:CDS 35.0%
CAATCAGAACAAAACAACAG+AGG - chr5_3:21826874-21826893 Msa0805320:intron 35.0%
TTACTGCTAGAGATAGTTAC+TGG + chr5_3:21826969-21826988 None:intergenic 35.0%
AAGGCAGACGTATATAGTTT+CGG + chr5_3:21826996-21827015 None:intergenic 35.0%
TCATGGTCAGTTAACAGAAA+AGG + chr5_3:21827015-21827034 None:intergenic 35.0%
TATCATAGACAGGAGCAATG+CGG + chr5_3:21823551-21823570 Msa0805310:intron 40.0%
! GCAACAATGAAAAGGTGTGA+AGG + chr5_3:21823629-21823648 Msa0805310:intron 40.0%
!! CTGAATGATTTGCTGAGCTT+GGG - chr5_3:21823651-21823670 Msa0805320:three_prime_UTR 40.0%
AAAAAAGGGTGACCGTGTAT+TGG - chr5_3:21823806-21823825 Msa0805320:three_prime_UTR 40.0%
TCTAACAAAGTTGCCTCCAA+TGG - chr5_3:21823867-21823886 Msa0805320:three_prime_UTR 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr5_3:21823964-21823983 Msa0805320:three_prime_UTR 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr5_3:21823965-21823984 Msa0805320:three_prime_UTR 40.0%
CGTACAATACAGCAAATGGT+GGG - chr5_3:21823996-21824015 Msa0805320:three_prime_UTR 40.0%
GTGAAGGGTGGAATAAAATC+GGG - chr5_3:21824180-21824199 Msa0805320:three_prime_UTR 40.0%
TGGAAATTCCACCTTCATTG+CGG - chr5_3:21824208-21824227 Msa0805320:three_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr5_3:21824400-21824419 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr5_3:21824399-21824418 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr5_3:21824399-21824418 Msa0805320:three_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr5_3:21824400-21824419 Msa0805320:three_prime_UTR 40.0%
TGGGTGTGAATGAGTGAATT+TGG - chr5_3:21824449-21824468 Msa0805320:exon 40.0%
CTACATAGGTCGTATCTCTA+GGG + chr5_3:21824484-21824503 None:intergenic 40.0%
ACTACATAGGTCGTATCTCT+AGG + chr5_3:21824485-21824504 None:intergenic 40.0%
! TTTATCGGATCCCAACGTTT+TGG - chr5_3:21824574-21824593 Msa0805320:intron 40.0%
! TTATCGGATCCCAACGTTTT+GGG - chr5_3:21824575-21824594 Msa0805320:intron 40.0%
CCTTTCATACCCAAAACGTT+GGG + chr5_3:21824587-21824606 None:intergenic 40.0%
!! CCAACGTTTTGGGTATGAAA+GGG - chr5_3:21824585-21824604 Msa0805320:intron 40.0%
AAATAGGCCCATATCTCTGT+GGG + chr5_3:21824630-21824649 None:intergenic 40.0%
TAAATAGGCCCATATCTCTG+TGG + chr5_3:21824631-21824650 None:intergenic 40.0%
!!! TCTTTTGGGATGTAGGTGAT+TGG - chr5_3:21824832-21824851 Msa0805320:intron 40.0%
CACACGTAAAATTTCCTGCA+TGG + chr5_3:21825288-21825307 None:intergenic 40.0%
ACTTGAGATACAACAGCTAC+CGG + chr5_3:21825318-21825337 None:intergenic 40.0%
!!! CGTGCTACTTTTTACTTTCC+AGG - chr5_3:21825376-21825395 Msa0805320:intron 40.0%
TTTGCGCTGCTTAAGTTTAG+AGG - chr5_3:21825483-21825502 Msa0805320:intron 40.0%
ATCTGAAAGGCCATAAACAG+AGG + chr5_3:21825664-21825683 None:intergenic 40.0%
ACTGCTCGACATTATGAGAT+CGG - chr5_3:21825946-21825965 Msa0805320:intron 40.0%
AACCTTCAGTGTCATAATCC+CGG - chr5_3:21826384-21826403 Msa0805320:intron 40.0%
CAAATAGCTCTTTCTATCCC+AGG + chr5_3:21826484-21826503 None:intergenic 40.0%
!!! CTGAATCATCTGTTTTGAGG+AGG - chr5_3:21826516-21826535 Msa0805320:intron 40.0%
GTACTCTCATCTAAGAAAGG+TGG - chr5_3:21826575-21826594 Msa0805320:intron 40.0%
TGTAACGCCTTTGACATAGT+TGG - chr5_3:21826641-21826660 Msa0805320:intron 40.0%
ATTGCGACCAACTATGTCAA+AGG + chr5_3:21826651-21826670 None:intergenic 40.0%
!!! ACATGGAAGCATTTTCAGTC+GGG + chr5_3:21826794-21826813 None:intergenic 40.0%
!!! GACATGGAAGCATTTTCAGT+CGG + chr5_3:21826795-21826814 None:intergenic 40.0%
TTACTGGAAGACAGAACAAC+AGG + chr5_3:21826953-21826972 None:intergenic 40.0%
TTGTGTTGCAGAGATGTTCC+CGG - chr5_3:21823455-21823474 Msa0805320:three_prime_UTR 45.0%
!! GCTGAATGATTTGCTGAGCT+TGG - chr5_3:21823650-21823669 Msa0805320:three_prime_UTR 45.0%
CACAGCAGACATCCAATACA+CGG + chr5_3:21823821-21823840 Msa0805310:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr5_3:21823960-21823979 Msa0805310:CDS 45.0%
GCTGCGTACAATACAGCAAA+TGG - chr5_3:21823992-21824011 Msa0805320:three_prime_UTR 45.0%
GCGTACAATACAGCAAATGG+TGG - chr5_3:21823995-21824014 Msa0805320:three_prime_UTR 45.0%
GGAGTAGCTTCCAACACATT+CGG - chr5_3:21824421-21824440 Msa0805320:three_prime_UTR 45.0%
!! TTCCAACACATTCGGTGTGT+TGG - chr5_3:21824429-21824448 Msa0805320:three_prime_UTR 45.0%
!! TCCAACACATTCGGTGTGTT+GGG - chr5_3:21824430-21824449 Msa0805320:three_prime_UTR 45.0%
! GTCGTATCTCTAGGGAATGT+GGG + chr5_3:21824476-21824495 None:intergenic 45.0%
TACCCAACCATCACCTTACA+AGG - chr5_3:21824517-21824536 Msa0805320:CDS 45.0%
! CACCTTGTAAGGTGATGGTT+GGG + chr5_3:21824522-21824541 None:intergenic 45.0%
GAAACCACCTTGTAAGGTGA+TGG + chr5_3:21824527-21824546 None:intergenic 45.0%
TCACCTTACAAGGTGGTTTC+CGG - chr5_3:21824527-21824546 Msa0805320:CDS 45.0%
!! TGGGTTGGTTCTAACTCAAC+CGG + chr5_3:21824549-21824568 None:intergenic 45.0%
!! CCCAACGTTTTGGGTATGAA+AGG - chr5_3:21824584-21824603 Msa0805320:intron 45.0%
CCCTTTCATACCCAAAACGT+TGG + chr5_3:21824588-21824607 None:intergenic 45.0%
CACATTGCCCACAGAGATAT+GGG - chr5_3:21824620-21824639 Msa0805320:intron 45.0%
AACTAATGGTCGCCTCATCA+CGG - chr5_3:21824875-21824894 Msa0805320:intron 45.0%
!!! ACTTGCCGTTTTCTGATGCT+TGG - chr5_3:21825207-21825226 Msa0805320:CDS 45.0%
! GATGCAATCACTATGGGCTA+TGG - chr5_3:21825233-21825252 Msa0805320:CDS 45.0%
TGATAAGCGTAAAGCCATGC+AGG - chr5_3:21825271-21825290 Msa0805320:intron 45.0%
! ATTTTACGTGTGCTGAAGCC+CGG - chr5_3:21825296-21825315 Msa0805320:intron 45.0%
CTTGAGATACAACAGCTACC+GGG + chr5_3:21825317-21825336 None:intergenic 45.0%
AGGATAGATGCTGTAGAACC+TGG + chr5_3:21825397-21825416 None:intergenic 45.0%
CTAACCCCATTTCTCGTTCT+AGG - chr5_3:21825605-21825624 Msa0805320:intron 45.0%
CACTCCTAGAACGAGAAATG+GGG + chr5_3:21825612-21825631 None:intergenic 45.0%
CCACTCCTAGAACGAGAAAT+GGG + chr5_3:21825613-21825632 None:intergenic 45.0%
TCCACTCCTAGAACGAGAAA+TGG + chr5_3:21825614-21825633 None:intergenic 45.0%
CAGGGGAGGTAGGAATTTAT+TGG + chr5_3:21826036-21826055 None:intergenic 45.0%
ACCTTCAGTGTCATAATCCC+GGG - chr5_3:21826385-21826404 Msa0805320:intron 45.0%
AAGCCAATTTACTTGCGGCA+CGG - chr5_3:21826410-21826429 Msa0805320:intron 45.0%
TCTGCATTTCCATGGTTACC+TGG - chr5_3:21826463-21826482 Msa0805320:intron 45.0%
CTGCATTTCCATGGTTACCT+GGG - chr5_3:21826464-21826483 Msa0805320:intron 45.0%
CTTTCTATCCCAGGTAACCA+TGG + chr5_3:21826475-21826494 None:intergenic 45.0%
AGGACTTCTATGCATCCAAG+AGG + chr5_3:21826681-21826700 None:intergenic 45.0%
!!! CATGGAAGCATTTTCAGTCG+GGG + chr5_3:21826793-21826812 None:intergenic 45.0%
TGACCATGAGCAAGATACTC+TGG - chr5_3:21827026-21827045 Msa0805320:CDS 45.0%
!!! ATATTTTTCAAAAAAAAAAA+GGG + chr5_3:21824070-21824089 None:intergenic 5.0%
GTCGGTCGGAATGAAGGATA+AGG + chr5_3:21823489-21823508 Msa0805310:CDS 50.0%
ATGGAAGTCGGTCGGAATGA+AGG + chr5_3:21823495-21823514 Msa0805310:CDS 50.0%
TTGGAGCAGCGAATGGAAGT+CGG + chr5_3:21823507-21823526 Msa0805310:CDS 50.0%
CAGCCATTCGCTTCCAAATC+CGG + chr5_3:21823683-21823702 Msa0805310:CDS 50.0%
!! GGAAGCGAATGGCTGTTTCT+TGG - chr5_3:21823688-21823707 Msa0805320:three_prime_UTR 50.0%
CGTGTATTGGATGTCTGCTG+TGG - chr5_3:21823819-21823838 Msa0805320:three_prime_UTR 50.0%
TTGGATGTCTGCTGTGGAAG+TGG - chr5_3:21823825-21823844 Msa0805320:three_prime_UTR 50.0%
CAAAGTTGCCTCCAATGGCA+AGG - chr5_3:21823872-21823891 Msa0805320:three_prime_UTR 50.0%
AGAAGAGCTTGCCTTGCCAT+TGG + chr5_3:21823886-21823905 Msa0805310:CDS 50.0%
TGCCTTCATTGTACTCCCTC+CGG - chr5_3:21824265-21824284 Msa0805320:three_prime_UTR 50.0%
ACCCAACACACCGAATGTGT+TGG + chr5_3:21824434-21824453 None:intergenic 50.0%
! GGTCGTATCTCTAGGGAATG+TGG + chr5_3:21824477-21824496 None:intergenic 50.0%
! CCACCTTGTAAGGTGATGGT+TGG + chr5_3:21824523-21824542 None:intergenic 50.0%
CCAACCATCACCTTACAAGG+TGG - chr5_3:21824520-21824539 Msa0805320:CDS 50.0%
CAACCGGAAACCACCTTGTA+AGG + chr5_3:21824533-21824552 None:intergenic 50.0%
CCATATCTCTGTGGGCAATG+TGG + chr5_3:21824622-21824641 None:intergenic 50.0%
CCACATTGCCCACAGAGATA+TGG - chr5_3:21824619-21824638 Msa0805320:intron 50.0%
! CTTTGAAAGCGACCGTGATG+AGG + chr5_3:21824890-21824909 None:intergenic 50.0%
!! GTACATCCTAGGTGGGTTGA+AGG - chr5_3:21825173-21825192 Msa0805320:CDS 50.0%
! GATTCTTTGGTGTGAGCGGA+AGG - chr5_3:21825581-21825600 Msa0805320:CDS 50.0%
!! CCCATTTCTCGTTCTAGGAG+TGG - chr5_3:21825610-21825629 Msa0805320:intron 50.0%
GTCCCTGTAGCCTCTGTTTA+TGG - chr5_3:21825651-21825670 Msa0805320:intron 50.0%
GGCCATAAACAGAGGCTACA+GGG + chr5_3:21825656-21825675 None:intergenic 50.0%
AGGCCATAAACAGAGGCTAC+AGG + chr5_3:21825657-21825676 None:intergenic 50.0%
ATACTCCTGTGATGCAGGGA+AGG - chr5_3:21825888-21825907 Msa0805320:intron 50.0%
CAATTCCTTCCCTGCATCAC+AGG + chr5_3:21825896-21825915 None:intergenic 50.0%
CTGTGATGCAGGGAAGGAAT+TGG - chr5_3:21825894-21825913 Msa0805320:intron 50.0%
GCTCGACATTATGAGATCGG+TGG - chr5_3:21825949-21825968 Msa0805320:intron 50.0%
CGACATTATGAGATCGGTGG+AGG - chr5_3:21825952-21825971 Msa0805320:intron 50.0%
AATTCCTACCTCCCCTGTTC+AGG - chr5_3:21826039-21826058 Msa0805320:intron 50.0%
TTATACAGCCTGAACAGGGG+AGG + chr5_3:21826050-21826069 None:intergenic 50.0%
!! CAAGTAAATTGGCTTGGCCC+GGG + chr5_3:21826405-21826424 None:intergenic 50.0%
!! GCAAGTAAATTGGCTTGGCC+CGG + chr5_3:21826406-21826425 None:intergenic 50.0%
GGGCCAAGCCAATTTACTTG+CGG - chr5_3:21826405-21826424 Msa0805320:intron 50.0%
GTGCCGCAAGTAAATTGGCT+TGG + chr5_3:21826411-21826430 None:intergenic 50.0%
ATGGAGCTCCATGACACAAG+TGG + chr5_3:21826554-21826573 None:intergenic 50.0%
ACTTGTGTCATGGAGCTCCA+TGG - chr5_3:21826553-21826572 Msa0805320:intron 50.0%
! GCTCCAGAGTATCTTGCTCA+TGG + chr5_3:21827032-21827051 None:intergenic 50.0%
! CTGGATCTGAAGGGGGTATA+TGG + chr5_3:21827054-21827073 None:intergenic 50.0%
CATATACCCCCTTCAGATCC+AGG - chr5_3:21827052-21827071 Msa0805320:CDS 50.0%
TGTTGCAGAGATGTTCCCGG+CGG - chr5_3:21823458-21823477 Msa0805320:three_prime_UTR 55.0%
AAGGATAAGGAGCAACCGCC+GGG + chr5_3:21823476-21823495 Msa0805310:CDS 55.0%
GAAGGATAAGGAGCAACCGC+CGG + chr5_3:21823477-21823496 Msa0805310:CDS 55.0%
AGCAGCGAATGGAAGTCGGT+CGG + chr5_3:21823503-21823522 Msa0805310:CDS 55.0%
!! TGCGGTTGAAAAGCGCCTGT+CGG + chr5_3:21823533-21823552 Msa0805310:intron 55.0%
GGGCGCACGTTATCATAGAC+AGG + chr5_3:21823561-21823580 Msa0805310:intron 55.0%
GCACCGGATTTGGAAGCGAA+TGG - chr5_3:21823677-21823696 Msa0805320:three_prime_UTR 55.0%
AGAGCTTGCCTTGCCATTGG+AGG + chr5_3:21823883-21823902 Msa0805310:CDS 55.0%
GTTTCCAGGACTTGAACCCG+TGG + chr5_3:21823946-21823965 Msa0805310:CDS 55.0%
CATATGCAGGGTACGGGAAG+GGG + chr5_3:21824023-21824042 None:intergenic 55.0%
GCATATGCAGGGTACGGGAA+GGG + chr5_3:21824024-21824043 None:intergenic 55.0%
CTTCCCGTACCCTGCATATG+CGG - chr5_3:21824023-21824042 Msa0805320:three_prime_UTR 55.0%
TTCCCGTACCCTGCATATGC+GGG - chr5_3:21824024-21824043 Msa0805320:three_prime_UTR 55.0%
CTGAAGCTCCCGCATATGCA+GGG + chr5_3:21824035-21824054 None:intergenic 55.0%
ACTGAAGCTCCCGCATATGC+AGG + chr5_3:21824036-21824055 None:intergenic 55.0%
TGCCCCTAGCTGCCTCATTA+CGG - chr5_3:21824233-21824252 Msa0805320:three_prime_UTR 55.0%
ACGCCGTAATGAGGCAGCTA+GGG + chr5_3:21824239-21824258 None:intergenic 55.0%
AACGCCGTAATGAGGCAGCT+AGG + chr5_3:21824240-21824259 None:intergenic 55.0%
AGCTGCCTCATTACGGCGTT+TGG - chr5_3:21824240-21824259 Msa0805320:three_prime_UTR 55.0%
GCTGCCTCATTACGGCGTTT+GGG - chr5_3:21824241-21824260 Msa0805320:three_prime_UTR 55.0%
GCAACCCAAACGCCGTAATG+AGG + chr5_3:21824248-21824267 None:intergenic 55.0%
! GACCGGAGGGAGTACAATGA+AGG + chr5_3:21824270-21824289 None:intergenic 55.0%
GTGTTGGAAGCTACTCCCTC+CGG + chr5_3:21824418-21824437 None:intergenic 55.0%
GCATCACCTTCAACCCACCT+AGG + chr5_3:21825182-21825201 None:intergenic 55.0%
TAGCTACCAAGCACCCCATG+AGG + chr5_3:21825978-21825997 None:intergenic 55.0%
GCCCGGGATTATGACACTGA+AGG + chr5_3:21826389-21826408 None:intergenic 55.0%
CTGCCGTGCCGCAAGTAAAT+TGG + chr5_3:21826416-21826435 None:intergenic 55.0%
ATGGGTCGCCACTTGTGTCA+TGG - chr5_3:21826543-21826562 Msa0805320:intron 55.0%
GTCGCAATGAAGCGACCTCT+TGG - chr5_3:21826663-21826682 Msa0805320:intron 55.0%
TCGGTCGTTGGAGCAGCGAA+TGG + chr5_3:21823514-21823533 Msa0805310:CDS 60.0%
!! GAAAAGCGCCTGTCGGTCGT+TGG + chr5_3:21823526-21823545 Msa0805310:CDS 60.0%
TGCTGAGCTTGGGTCAGCAC+CGG - chr5_3:21823661-21823680 Msa0805320:three_prime_UTR 60.0%
! GCTTGGGTCAGCACCGGATT+TGG - chr5_3:21823667-21823686 Msa0805320:three_prime_UTR 60.0%
GTTGCCACGGGTTCAAGTCC+TGG - chr5_3:21823939-21823958 Msa0805320:three_prime_UTR 60.0%
CGCATATGCAGGGTACGGGA+AGG + chr5_3:21824025-21824044 None:intergenic 60.0%
CTCCCGCATATGCAGGGTAC+GGG + chr5_3:21824029-21824048 None:intergenic 60.0%
GCTCCCGCATATGCAGGGTA+CGG + chr5_3:21824030-21824049 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr5_3:21824040-21824059 Msa0805320:three_prime_UTR 60.0%
! CTAGGGGCACACCGCAATGA+AGG + chr5_3:21824222-21824241 None:intergenic 60.0%
CGCCGTAATGAGGCAGCTAG+GGG + chr5_3:21824238-21824257 None:intergenic 60.0%
TGAGATCGGTGGAGGCCTCA+TGG - chr5_3:21825960-21825979 Msa0805320:intron 60.0%
GAGATCGGTGGAGGCCTCAT+GGG - chr5_3:21825961-21825980 Msa0805320:intron 60.0%
AGATCGGTGGAGGCCTCATG+GGG - chr5_3:21825962-21825981 Msa0805320:intron 60.0%
ACAGCCTGAACAGGGGAGGT+AGG + chr5_3:21826046-21826065 None:intergenic 60.0%
TCGCTGCTCCAACGACCGAC+AGG - chr5_3:21823515-21823534 Msa0805320:three_prime_UTR 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr5_3:21824041-21824060 Msa0805320:three_prime_UTR 65.0%
GGGGCACACCGCAATGAAGG+TGG + chr5_3:21824219-21824238 None:intergenic 65.0%
! TGGAGGCCTCATGGGGTGCT+TGG - chr5_3:21825969-21825988 Msa0805320:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 21823384 21827078 21823384 ID=Msa0805320;Name=Msa0805320
chr5_3 mRNA 21823384 21827078 21823384 ID=Msa0805320-mRNA-1;Parent=Msa0805320;Name=Msa0805320-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.87|0.77|1|0.75|0.66|9|976|268
chr5_3 exon 21823384 21823551 21823384 ID=Msa0805320-mRNA-1:exon:8756;Parent=Msa0805320-mRNA-1
chr5_3 exon 21823649 21824557 21823649 ID=Msa0805320-mRNA-1:exon:8755;Parent=Msa0805320-mRNA-1
chr5_3 exon 21824736 21824835 21824736 ID=Msa0805320-mRNA-1:exon:8754;Parent=Msa0805320-mRNA-1
chr5_3 exon 21825003 21825064 21825003 ID=Msa0805320-mRNA-1:exon:8753;Parent=Msa0805320-mRNA-1
chr5_3 exon 21825145 21825278 21825145 ID=Msa0805320-mRNA-1:exon:8752;Parent=Msa0805320-mRNA-1
chr5_3 exon 21825533 21825615 21825533 ID=Msa0805320-mRNA-1:exon:8751;Parent=Msa0805320-mRNA-1
chr5_3 exon 21826587 21826659 21826587 ID=Msa0805320-mRNA-1:exon:8750;Parent=Msa0805320-mRNA-1
chr5_3 exon 21826747 21826811 21826747 ID=Msa0805320-mRNA-1:exon:8749;Parent=Msa0805320-mRNA-1
chr5_3 exon 21826890 21827078 21826890 ID=Msa0805320-mRNA-1:exon:8748;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21826890 21827078 21826890 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21826747 21826811 21826747 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21826587 21826659 21826587 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21825533 21825615 21825533 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21825145 21825278 21825145 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21825003 21825064 21825003 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21824736 21824835 21824736 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 CDS 21824457 21824557 21824457 ID=Msa0805320-mRNA-1:cds;Parent=Msa0805320-mRNA-1
chr5_3 three_prime_UTR 21823649 21824456 21823649 ID=Msa0805320-mRNA-1:three_prime_utr;Parent=Msa0805320-mRNA-1
chr5_3 three_prime_UTR 21823384 21823551 21823384 ID=Msa0805320-mRNA-1:three_prime_utr;Parent=Msa0805320-mRNA-1
Gene Sequence

>Msa0805320

ATGTACTCCAATTTAAAACGGCGGTTAAATAAAAACACGTACTTTAATTTGACACGTGAGAGTTGTGAATGTTGTGTTGCAGAGATGTTCCCGGCGGTTGCTCCTTATCCTTCATTCCGACCGACTTCCATTCGCTGCTCCAACGACCGACAGGCGCTTTTCAACCGCATTGCTCCTGTCTATGATAACCTGAATGATTTGCTGAGCTTGGGTCAGCACCGGATTTGGAAGCGAATGGCTGTTTCTTGGACTGAAGCAAAAAAGGGTGACCGTGTATTGGATGTCTGCTGTGGAAGTGGTGATTTATCCTTTCTCTTGTCTAACAAAGTGATTGGTCTTGATTTCTCAAAGGAGCAACTAATGGTCGCCTCATCACGGTCGCTTTCAAAGAATTGCTTCAATAATATTGAGTGGGTTGAAGGTGATGCTCTTGACTTGCCGTTTTCTGATGCTTGGTTTGATGCAATCACTATGGGCTATGGTCTTCGAAATGTTGTTGATAAGCGTAAAGCCATGCAGGAAATTTTACGTGTGCTGAAGCCCGGTTCTACAGCATCTATCCTTGACTTTAATAAAAGCAATGAGCTACTAACTTCTTCATTTACGGAGTGGATGATTGACAATATTGTTGTCCCTGTAGCCTCTGTTTATGGCCTTTCAGATGACTACAAATATCTCAAAAGTTCAATAAGAGAATTTTTAACAGGGAAGGAATTGGAGAAACTTGCTTTAGAAGTAGGATTTTCTACTGCTCGACATTATGAGATCGGTGGAGGCCTCATGGGGTGCTTGGTAGCTAAACATTAG

Protein sequence

>Msa0805320

MYSNLKRRLNKNTYFNLTRESCECCVAEMFPAVAPYPSFRPTSIRCSNDRQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWTEAKKGDRVLDVCCGSGDLSFLLSNKVIGLDFSKEQLMVASSRSLSKNCFNNIEWVEGDALDLPFSDAWFDAITMGYGLRNVVDKRKAMQEILRVLKPGSTASILDFNKSNELLTSSFTEWMIDNIVVPVASVYGLSDDYKYLKSSIREFLTGKELEKLALEVGFSTARHYEIGGGLMGCLVAKH*