AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1123980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1123980 MtrunA17_Chr7g0263821 95.299 234 8 2 1 234 1 231 4.06e-165 455
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1123980 AT2G37110.1 63.559 236 81 1 2 232 6 241 1.43e-108 312
Msa1123980 AT2G40935.8 27.861 201 98 8 18 208 1 164 2.06e-14 69.7
Msa1123980 AT2G40935.9 27.861 201 98 8 18 208 1 164 2.06e-14 69.7
Msa1123980 AT2G40935.1 27.861 201 98 8 18 208 1 164 2.06e-14 69.7
Msa1123980 AT2G40935.6 27.861 201 98 8 18 208 1 164 2.06e-14 69.7
Msa1123980 AT2G40935.5 27.861 201 98 8 18 208 1 164 2.06e-14 69.7

Find 97 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGCAAAATTTGTTATTA+AGG 0.152238 7_3:+75016307 Msa1123980:three_prime_UTR
CGACCCATGGTTTGCTCTCC+TGG 0.155725 7_3:-75016021 None:intergenic
CTCGGTTGTTTGTTCAGCTT+TGG 0.201151 7_3:-75012018 None:intergenic
AAAAGTGCATCTTGGTTCTT+TGG 0.239552 7_3:+75016166 Msa1123980:three_prime_UTR
CCGTCGCAGGTTCAATTTAG+AGG 0.280233 7_3:+75013231 Msa1123980:CDS
GCATCTTGGTTCTTTGGATT+TGG 0.285518 7_3:+75016172 Msa1123980:three_prime_UTR
GAGAGAGATATGAGAAATTT+CGG 0.297656 7_3:-75011842 None:intergenic
GAGGACTTGCCTCTTCTTCT+TGG 0.300205 7_3:-75011959 None:intergenic
AATCACTGTTTGCATTATTC+TGG 0.315644 7_3:+75013130 Msa1123980:CDS
GGATACATGCTAGGTCTTCT+TGG 0.318738 7_3:+75013037 Msa1123980:intron
CATTCTAATCCTGGGACATT+TGG 0.320185 7_3:+75013106 Msa1123980:CDS
TCACCAACAAAATATAATAT+TGG 0.330122 7_3:-75011869 None:intergenic
GAAGCAAAATTTGTTATTAA+GGG 0.358297 7_3:+75016308 Msa1123980:three_prime_UTR
AAGAAAATTCTTCCTCGTCT+TGG 0.373703 7_3:+75016053 Msa1123980:exon
TGGGTGCTGCGGAAGCTATT+TGG 0.374015 7_3:+75015843 Msa1123980:CDS
TCGGTTGTTTGTTCAGCTTT+GGG 0.376085 7_3:-75012017 None:intergenic
TCCTCCGTCTGCGCTTGTCT+TGG 0.401288 7_3:+75012134 Msa1123980:CDS
CTTCAATGCACAACCAGTAT+TGG 0.404863 7_3:+75015987 Msa1123980:CDS
GACCCATGGTTTGCTCTCCT+GGG 0.411796 7_3:-75016020 None:intergenic
AGCCCATTCCTCGTTCTCCT+TGG 0.414902 7_3:+75012108 Msa1123980:CDS
GTGATTGGGAATTCATGCTT+TGG 0.424535 7_3:+75013160 Msa1123980:CDS
CGCCGTAGAGTGCCTCATCC+TGG 0.426616 7_3:+75015964 Msa1123980:CDS
TATTCTGGACTGTATGTGAT+TGG 0.427733 7_3:+75013145 Msa1123980:CDS
GTGGCTCCTTGTGTGCTGTA+TGG 0.429471 7_3:+75013064 Msa1123980:CDS
GAGCAGCAGGATCATTATCT+TGG 0.435263 7_3:+75012038 Msa1123980:CDS
ATTAAGGGCATGGTTCTGTA+TGG 0.441703 7_3:+75016323 Msa1123980:three_prime_UTR
GAAGTTGTGAGGCACTTAAT+AGG 0.446533 7_3:+75015815 Msa1123980:CDS
GAGAGACTTCATTCTAATCC+TGG 0.446721 7_3:+75013097 Msa1123980:CDS
GTTTGTTCAGCTTTGGGAGG+TGG 0.450225 7_3:-75012011 None:intergenic
TTATATGTATTTGTTTATTG+TGG 0.454083 7_3:+75016255 Msa1123980:three_prime_UTR
TACATATAATACAGAACAGC+AGG 0.455475 7_3:-75016241 None:intergenic
TGCTGCAAAAGTGATCGTTT+TGG 0.456070 7_3:-75012157 None:intergenic
TTATTCTATAATAATAAAAC+AGG 0.456244 7_3:-75016435 None:intergenic
TGTGCTGTATGGAAGCAATA+TGG 0.456712 7_3:+75013075 Msa1123980:CDS
CAAAATCAGGAGAGAGAAAA+GGG 0.461210 7_3:-75016140 None:intergenic
GGAGAGCAAACCATGGGTCG+TGG 0.465391 7_3:+75016024 Msa1123980:CDS
GACCGCCGATGGGCTTCCGA+TGG 0.466752 7_3:+75012064 Msa1123980:CDS
GATACATGCTAGGTCTTCTT+GGG 0.469252 7_3:+75013038 Msa1123980:intron
GCAAAATCAGGAGAGAGAAA+AGG 0.469880 7_3:-75016141 None:intergenic
AAAATTCTTCCTCGTCTTGG+AGG 0.474645 7_3:+75016056 Msa1123980:three_prime_UTR
AAAATTTGTTATTAAGGGCA+TGG 0.482620 7_3:+75016313 Msa1123980:three_prime_UTR
ATGGGCCATGGAAGCGTCAT+GGG 0.486800 7_3:+75012083 Msa1123980:CDS
TTCCAAGGAGAACGAGGAAT+GGG 0.488145 7_3:-75012110 None:intergenic
GATGGGCTTCCGATGGGCCA+TGG 0.493261 7_3:+75012071 Msa1123980:CDS
ATTATAGAATAAGTTGTCTC+CGG 0.501638 7_3:+75016446 Msa1123980:three_prime_UTR
GTTGGAATTGTCTTGCACCC+TGG 0.503169 7_3:+75013182 Msa1123980:CDS
AATTCATCAATCATCATCAA+TGG 0.508789 7_3:+75011914 Msa1123980:exon
CGGAAGCTATTTGGAAAATG+AGG 0.509204 7_3:+75015852 Msa1123980:CDS
ACGGCTATGATATGAAAGCC+AGG 0.511774 7_3:-75013200 None:intergenic
GATGGGCCATGGAAGCGTCA+TGG 0.513821 7_3:+75012082 Msa1123980:CDS
GTCTGTGCTCTTTGTCAAGA+AGG 0.519013 7_3:+75015931 Msa1123980:CDS
TTGGGAATTCATGCTTTGGT+TGG 0.519796 7_3:+75013164 Msa1123980:CDS
TATCTTGGATGGACCGCCGA+TGG 0.521448 7_3:+75012053 Msa1123980:CDS
TGAACAAACAACCGAGCAGC+AGG 0.523235 7_3:+75012025 Msa1123980:CDS
ATCTTGGATGGACCGCCGAT+GGG 0.533392 7_3:+75012054 Msa1123980:CDS
ATTCTGGACTGTATGTGATT+GGG 0.533754 7_3:+75013146 Msa1123980:CDS
TTCAACGTCAAATCATATAG+AGG 0.534820 7_3:-75016105 None:intergenic
TGTTGTTGTTGTTTGAGAAG+AGG 0.535687 7_3:-75011978 None:intergenic
GCTGACCCATGACGCTTCCA+TGG 0.535716 7_3:-75012088 None:intergenic
GAGAGCAAACCATGGGTCGT+GGG 0.539054 7_3:+75016025 Msa1123980:CDS
CAGTGATTGCCAAATGTCCC+AGG 0.539931 7_3:-75013115 None:intergenic
TCTTCAAGCCCCACGACCCA+TGG 0.541687 7_3:-75016034 None:intergenic
GCTAGGTCTTCTTGGGAGTG+TGG 0.546107 7_3:+75013045 Msa1123980:intron
ACCCATGGTTTGCTCTCCTG+GGG 0.548999 7_3:-75016019 None:intergenic
ACTCAATCACCAAGAAGAAG+AGG 0.557212 7_3:+75011950 Msa1123980:CDS
ATGGCCCATCGGAAGCCCAT+CGG 0.562094 7_3:-75012069 None:intergenic
GCCGTACTGAAATCCGTCGC+AGG 0.563057 7_3:+75013218 Msa1123980:CDS
AGCAGGATCATTATCTTGGA+TGG 0.563776 7_3:+75012042 Msa1123980:CDS
TTGGCCAAGACAAGCGCAGA+CGG 0.569231 7_3:-75012138 None:intergenic
GTTCCAAGGAGAACGAGGAA+TGG 0.573660 7_3:-75012111 None:intergenic
GCAGCGTGAACATTATGAGT+TGG 0.577730 7_3:+75015876 Msa1123980:CDS
GCGCAGACGGAGGAGTTCCA+AGG 0.578089 7_3:-75012125 None:intergenic
AGCCAGGATGAGGCACTCTA+CGG 0.582573 7_3:-75015966 None:intergenic
AGAGACTTCATTCTAATCCT+GGG 0.586170 7_3:+75013098 Msa1123980:CDS
AAGATAATGATCCTGCTGCT+CGG 0.588909 7_3:-75012036 None:intergenic
ATGACGCTTCCATGGCCCAT+CGG 0.595557 7_3:-75012080 None:intergenic
ACCTGCGACGGATTTCAGTA+CGG 0.596489 7_3:-75013219 None:intergenic
ACTGGTTGTGCATTGAAGCC+AGG 0.597364 7_3:-75015982 None:intergenic
CTAGTCATAAAACAAGGGGC+CGG 0.607165 7_3:-75016465 None:intergenic
GTTGTTTGTTCAGCTTTGGG+AGG 0.607252 7_3:-75012014 None:intergenic
CCTCTAAATTGAACCTGCGA+CGG 0.608381 7_3:-75013231 None:intergenic
AGAGCAAACCATGGGTCGTG+GGG 0.610620 7_3:+75016026 Msa1123980:CDS
AATAGGTCATGTGGGTGCTG+CGG 0.619381 7_3:+75015832 Msa1123980:CDS
TGTGCATTGAAGCCAGGATG+AGG 0.621067 7_3:-75015976 None:intergenic
AAAACTAGTCATAAAACAAG+GGG 0.630535 7_3:-75016469 None:intergenic
GAGGCACTTAATAGGTCATG+TGG 0.631795 7_3:+75015823 Msa1123980:CDS
AGAGAAAAGGGAGCAAATGA+CGG 0.634642 7_3:-75016128 None:intergenic
ATTTCGGAGAAAATAGATGT+CGG 0.640965 7_3:-75011826 None:intergenic
CGGCTATGATATGAAAGCCA+GGG 0.643919 7_3:-75013199 None:intergenic
TTGCTTCCATACAGCACACA+AGG 0.646064 7_3:-75013070 None:intergenic
CCCATGGTTTGCTCTCCTGG+GGG 0.646326 7_3:-75016018 None:intergenic
TGAAAATCAGGGAAGTTGTG+AGG 0.661588 7_3:+75015804 Msa1123980:intron
GAGGAGTTCCAAGGAGAACG+AGG 0.662695 7_3:-75012116 None:intergenic
GCCAAGACAAGCGCAGACGG+AGG 0.664318 7_3:-75012135 None:intergenic
AGAATAGCACCTCCAAGACG+AGG 0.672156 7_3:-75016065 None:intergenic
ACATATAATACAGAACAGCA+GGG 0.688049 7_3:-75016240 None:intergenic
AGGCACTTAATAGGTCATGT+GGG 0.693757 7_3:+75015824 Msa1123980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTATTATAATAAAGTTT+AGG + chr7_3:75013654-75013673 Msa1123980:intron 10.0%
!!! ATTTTTTTTTTTGTTTTTGT+TGG - chr7_3:75014365-75014384 None:intergenic 10.0%
!! ACAAAAACAAAAAAAAAAAT+TGG + chr7_3:75014365-75014384 Msa1123980:intron 10.0%
!! TATATTATATTAATTCAGAA+AGG - chr7_3:75014673-75014692 None:intergenic 10.0%
!! ATTATTATTATACTTCATTA+AGG - chr7_3:75014752-75014771 None:intergenic 10.0%
!! TTATTCTATAATAATAAAAC+AGG - chr7_3:75016438-75016457 None:intergenic 10.0%
!! TTTGTATATCAAAATAACAT+TGG + chr7_3:75012869-75012888 Msa1123980:intron 15.0%
!!! GTTGTTTTTTGTATTTTATT+GGG + chr7_3:75012891-75012910 Msa1123980:intron 15.0%
!!! TTGTTTTTTGTATTTTATTG+GGG + chr7_3:75012892-75012911 Msa1123980:intron 15.0%
!! AAACAAAAAAAAAAATTGGT+CGG + chr7_3:75014369-75014388 Msa1123980:intron 15.0%
!! TTGTTAAATTATATATGAAG+AGG - chr7_3:75015118-75015137 None:intergenic 15.0%
!! ATATGAAAAAATTTGGATTA+TGG - chr7_3:75015277-75015296 None:intergenic 15.0%
!! AACTGTTTATAAAATGATTT+CGG + chr7_3:75015301-75015320 Msa1123980:intron 15.0%
!!! AATTTTGTCTGTATTTTTTA+TGG + chr7_3:75015495-75015514 Msa1123980:intron 15.0%
!!! TTTTTATCTAAATTTTGTTC+AGG + chr7_3:75015553-75015572 Msa1123980:intron 15.0%
!! TTATATGTATTTGTTTATTG+TGG + chr7_3:75016255-75016274 Msa1123980:three_prime_UTR 15.0%
!!! TTTATGACTAGTTTTTTAAT+TGG + chr7_3:75016477-75016496 Msa1123980:three_prime_UTR 15.0%
!!! TCTCCAATATTATATTTTGT+TGG + chr7_3:75011866-75011885 Msa1123980:five_prime_UTR 20.0%
!! TCACCAACAAAATATAATAT+TGG - chr7_3:75011872-75011891 None:intergenic 20.0%
!! TAGAAGAGAAATAAAAGAAA+GGG - chr7_3:75012204-75012223 None:intergenic 20.0%
!! TTAGAAGAGAAATAAAAGAA+AGG - chr7_3:75012205-75012224 None:intergenic 20.0%
!!! ATTTGTGAGTTGATAAAATT+GGG + chr7_3:75012261-75012280 Msa1123980:intron 20.0%
!!! TTTTTTTGAGGAGAATTTTA+GGG + chr7_3:75012286-75012305 Msa1123980:intron 20.0%
!!! GAATTATTTTTCCTAACAAA+GGG - chr7_3:75012339-75012358 None:intergenic 20.0%
!!! TGAATTATTTTTCCTAACAA+AGG - chr7_3:75012340-75012359 None:intergenic 20.0%
!!! TATCATATGAATTTTGACTT+TGG + chr7_3:75012403-75012422 Msa1123980:intron 20.0%
!!! TTATAAAATCGTTTGGTTTA+GGG - chr7_3:75012488-75012507 None:intergenic 20.0%
!!! ATTATAAAATCGTTTGGTTT+AGG - chr7_3:75012489-75012508 None:intergenic 20.0%
!! ATGAACATTATAAAATCGTT+TGG - chr7_3:75012495-75012514 None:intergenic 20.0%
!!! GGTTGTTTTTTGTATTTTAT+TGG + chr7_3:75012890-75012909 Msa1123980:intron 20.0%
!!! TATTTTATTGGGGAAATAAA+TGG + chr7_3:75012902-75012921 Msa1123980:intron 20.0%
!!! ATTTTATTGGGGAAATAAAT+GGG + chr7_3:75012903-75012922 Msa1123980:intron 20.0%
!!! TATTTGATATGTTTTCGATA+TGG + chr7_3:75012974-75012993 Msa1123980:intron 20.0%
!!! AATAATCAAACTTTTGAACA+CGG - chr7_3:75013719-75013738 None:intergenic 20.0%
!! AAATAAAATAGCTGTATAGA+GGG + chr7_3:75013897-75013916 Msa1123980:intron 20.0%
!!! CACATTTTAAATATTTTGAG+AGG - chr7_3:75014168-75014187 None:intergenic 20.0%
!!! TTTTTTGTTTTTGTTGGATA+CGG - chr7_3:75014359-75014378 None:intergenic 20.0%
!! CAGTAAAAAATACATAAAGT+TGG - chr7_3:75014843-75014862 None:intergenic 20.0%
!!! CAACTTTATGTATTTTTTAC+TGG + chr7_3:75014841-75014860 Msa1123980:intron 20.0%
!! GTTATGCATATGAAAAAATT+TGG - chr7_3:75015284-75015303 None:intergenic 20.0%
!! ATATATGATATCCATTGTAA+CGG - chr7_3:75015390-75015409 None:intergenic 20.0%
!! AAAAAAAATATCCCAATGAT+AGG - chr7_3:75015538-75015557 None:intergenic 20.0%
!! TTTCATCTATGAATTACTTT+GGG - chr7_3:75015639-75015658 None:intergenic 20.0%
!!! TTTTCATCTATGAATTACTT+TGG - chr7_3:75015640-75015659 None:intergenic 20.0%
!! AAAGTAATTCATAGATGAAA+AGG + chr7_3:75015639-75015658 Msa1123980:intron 20.0%
!! TATACTCTTTAAATATGAGA+AGG + chr7_3:75015747-75015766 Msa1123980:intron 20.0%
!!! TGAAGCAAAATTTGTTATTA+AGG + chr7_3:75016307-75016326 Msa1123980:three_prime_UTR 20.0%
!!! GAAGCAAAATTTGTTATTAA+GGG + chr7_3:75016308-75016327 Msa1123980:three_prime_UTR 20.0%
!! AAAAACTAGTCATAAAACAA+GGG - chr7_3:75016473-75016492 None:intergenic 20.0%
!! AAAAAACTAGTCATAAAACA+AGG - chr7_3:75016474-75016493 None:intergenic 20.0%
! AATTCATCAATCATCATCAA+TGG + chr7_3:75011914-75011933 Msa1123980:exon 25.0%
!!! GATTTGTGAGTTGATAAAAT+TGG + chr7_3:75012260-75012279 Msa1123980:intron 25.0%
!!! TTTGTGAGTTGATAAAATTG+GGG + chr7_3:75012262-75012281 Msa1123980:intron 25.0%
!!! GTTTTTTTGAGGAGAATTTT+AGG + chr7_3:75012285-75012304 Msa1123980:intron 25.0%
! TCAAAATCCACAACATAATA+AGG - chr7_3:75012456-75012475 None:intergenic 25.0%
! ATCAAAAGTGAATTCTATTG+TGG + chr7_3:75012518-75012537 Msa1123980:intron 25.0%
!! ATAATTTTACGTATTGTCCA+TGG - chr7_3:75012565-75012584 None:intergenic 25.0%
!! TATCAGTTTGTTCAAAACAT+CGG - chr7_3:75012691-75012710 None:intergenic 25.0%
! TGAACAAACTGATATCAATT+AGG + chr7_3:75012697-75012716 Msa1123980:intron 25.0%
!! AAAAGCGGATAAATGTTTTA+GGG - chr7_3:75013002-75013021 None:intergenic 25.0%
!! TAAAAGCGGATAAATGTTTT+AGG - chr7_3:75013003-75013022 None:intergenic 25.0%
! TATCATCACTACATAATAAG+AGG - chr7_3:75013279-75013298 None:intergenic 25.0%
! AATGTTGTAATGAAACTAGT+TGG - chr7_3:75013454-75013473 None:intergenic 25.0%
!!! GATTATTTTATAATGCAGTG+CGG + chr7_3:75013732-75013751 Msa1123980:intron 25.0%
! TAACTGTCATAAAAATACCA+CGG + chr7_3:75013823-75013842 Msa1123980:intron 25.0%
! GAAATAAAATAGCTGTATAG+AGG + chr7_3:75013896-75013915 Msa1123980:intron 25.0%
!!! TGTCACACATTCATTTTTAT+AGG + chr7_3:75014089-75014108 Msa1123980:intron 25.0%
!!! GTCACACATTCATTTTTATA+GGG + chr7_3:75014090-75014109 Msa1123980:intron 25.0%
!!! TTAAATATTTTGAGAGGATC+TGG - chr7_3:75014162-75014181 None:intergenic 25.0%
! ATTATACTTCATTAAGGACA+AGG - chr7_3:75014746-75014765 None:intergenic 25.0%
!!! GGACTTGAAATATTTTTATG+TGG + chr7_3:75015322-75015341 Msa1123980:intron 25.0%
! TACAGACAAAATTATCTTCA+TGG - chr7_3:75015488-75015507 None:intergenic 25.0%
! ATGAAAATAGTCCTATCATT+GGG + chr7_3:75015524-75015543 Msa1123980:intron 25.0%
! TTAAGCAAATACAAAGTTGA+TGG - chr7_3:75015597-75015616 None:intergenic 25.0%
!! CATATTTAAAGAGTATAACG+TGG - chr7_3:75015744-75015763 None:intergenic 25.0%
!!! AAAATTTGTTATTAAGGGCA+TGG + chr7_3:75016313-75016332 Msa1123980:three_prime_UTR 25.0%
! ATTATAGAATAAGTTGTCTC+CGG + chr7_3:75016446-75016465 Msa1123980:three_prime_UTR 25.0%
! AAAACTAGTCATAAAACAAG+GGG - chr7_3:75016472-75016491 None:intergenic 25.0%
ATTTCGGAGAAAATAGATGT+CGG - chr7_3:75011829-75011848 None:intergenic 30.0%
GAGAGAGATATGAGAAATTT+CGG - chr7_3:75011845-75011864 None:intergenic 30.0%
!! TTGTGAGTTGATAAAATTGG+GGG + chr7_3:75012263-75012282 Msa1123980:intron 30.0%
!!! TAAAATTGGGGGTTTTTTTG+AGG + chr7_3:75012274-75012293 Msa1123980:intron 30.0%
AGCTTAACCTTATTATGTTG+TGG + chr7_3:75012446-75012465 Msa1123980:intron 30.0%
TTTGAATAGTATTGTGTCGT+TGG - chr7_3:75012596-75012615 None:intergenic 30.0%
! CACGACTTTTCTCATATTTA+CGG + chr7_3:75012625-75012644 Msa1123980:intron 30.0%
AGTAGACTAGTAGATGTTAA+TGG - chr7_3:75012753-75012772 None:intergenic 30.0%
AACATATCAAATAGAGCAAG+AGG - chr7_3:75012967-75012986 None:intergenic 30.0%
!! CATTTATCCGCTTTTACTTA+TGG + chr7_3:75013007-75013026 Msa1123980:intron 30.0%
AGTTCAACCATAAGTAAAAG+CGG - chr7_3:75013017-75013036 None:intergenic 30.0%
AATCACTGTTTGCATTATTC+TGG + chr7_3:75013130-75013149 Msa1123980:CDS 30.0%
! AGTTTACACTTTGGTTCATT+CGG - chr7_3:75013413-75013432 None:intergenic 30.0%
GTAATGAAACTAGTTGGATT+CGG - chr7_3:75013448-75013467 None:intergenic 30.0%
ACTGTTCAGAAAAATAGTTC+AGG - chr7_3:75013567-75013586 None:intergenic 30.0%
CTGATTTCAAACTAATAGCT+CGG + chr7_3:75013685-75013704 Msa1123980:intron 30.0%
TTATGACAGTTAGCTATTGA+TGG - chr7_3:75013815-75013834 None:intergenic 30.0%
AAAATACCACGGTGATAAAT+TGG + chr7_3:75013834-75013853 Msa1123980:intron 30.0%
AAATACCACGGTGATAAATT+GGG + chr7_3:75013835-75013854 Msa1123980:intron 30.0%
ATAAATTGGGGAAAATTCTG+TGG + chr7_3:75013848-75013867 Msa1123980:intron 30.0%
GAGAAATGTATAGTAGCATA+GGG - chr7_3:75014019-75014038 None:intergenic 30.0%
AATTAGAACACTGAACTGAA+GGG - chr7_3:75014041-75014060 None:intergenic 30.0%
TTGATTGCAATCCATCTATA+TGG + chr7_3:75014059-75014078 Msa1123980:intron 30.0%
! TTGTCTTTTGGTATTTGATC+TGG + chr7_3:75014135-75014154 Msa1123980:intron 30.0%
ACAAAGTCAAGAAAACAACA+AGG - chr7_3:75014208-75014227 None:intergenic 30.0%
AAAAAAAAATTGGTCGGACA+CGG + chr7_3:75014375-75014394 Msa1123980:intron 30.0%
ATGAAATTAGAACCAAGAAG+GGG - chr7_3:75014554-75014573 None:intergenic 30.0%
CATGAAATTAGAACCAAGAA+GGG - chr7_3:75014555-75014574 None:intergenic 30.0%
ATGTTACTACTATAAACGTG+TGG - chr7_3:75014805-75014824 None:intergenic 30.0%
! TGAAGAGGTTTAAAGTACAA+GGG - chr7_3:75015103-75015122 None:intergenic 30.0%
! ATGAAGAGGTTTAAAGTACA+AGG - chr7_3:75015104-75015123 None:intergenic 30.0%
GATAGAGAATAAAAAATGCG+AGG - chr7_3:75015243-75015262 None:intergenic 30.0%
TGGATATCATATATCAACTG+TGG + chr7_3:75015396-75015415 Msa1123980:intron 30.0%
! CAATGATAGGACTATTTTCA+TGG - chr7_3:75015525-75015544 None:intergenic 30.0%
CATGAAAATAGTCCTATCAT+TGG + chr7_3:75015523-75015542 Msa1123980:intron 30.0%
ACAATTGAATTCCAGATTAG+TGG + chr7_3:75015665-75015684 Msa1123980:intron 30.0%
TGGACCATAGAAAGATTATT+GGG - chr7_3:75015724-75015743 None:intergenic 30.0%
ATTTGTGATCCTTGAAAATC+AGG + chr7_3:75015792-75015811 Msa1123980:intron 30.0%
TTTGTGATCCTTGAAAATCA+GGG + chr7_3:75015793-75015812 Msa1123980:intron 30.0%
TTCAACGTCAAATCATATAG+AGG - chr7_3:75016108-75016127 None:intergenic 30.0%
ACATATAATACAGAACAGCA+GGG - chr7_3:75016243-75016262 None:intergenic 30.0%
TACATATAATACAGAACAGC+AGG - chr7_3:75016244-75016263 None:intergenic 30.0%
!! TGTTGTTGTTGTTTGAGAAG+AGG - chr7_3:75011981-75012000 None:intergenic 35.0%
AAGGGACATATTCTTGTACA+TGG - chr7_3:75012321-75012340 None:intergenic 35.0%
CAAGAATATGTCCCTTTGTT+AGG + chr7_3:75012325-75012344 Msa1123980:intron 35.0%
! AATCGTTTGGTTTAGGGTTA+TGG - chr7_3:75012482-75012501 None:intergenic 35.0%
! ATTTTACGTATTGTCCATGG+TGG - chr7_3:75012562-75012581 None:intergenic 35.0%
TCTCATATTTACGGCTAAGA+CGG + chr7_3:75012634-75012653 Msa1123980:intron 35.0%
!! TTTTAAGTACTAGTCCACGT+TGG + chr7_3:75012815-75012834 Msa1123980:intron 35.0%
! GCTTTTACTTATGGTTGAAC+TGG + chr7_3:75013016-75013035 Msa1123980:intron 35.0%
AGAGACTTCATTCTAATCCT+GGG + chr7_3:75013098-75013117 Msa1123980:CDS 35.0%
TATTCTGGACTGTATGTGAT+TGG + chr7_3:75013145-75013164 Msa1123980:CDS 35.0%
ATTCTGGACTGTATGTGATT+GGG + chr7_3:75013146-75013165 Msa1123980:CDS 35.0%
! ACCTATTGTGATTTGTGATG+TGG + chr7_3:75013308-75013327 Msa1123980:intron 35.0%
! CAAACTTTTGAACACGGTTT+GGG - chr7_3:75013713-75013732 None:intergenic 35.0%
! TCAAACTTTTGAACACGGTT+TGG - chr7_3:75013714-75013733 None:intergenic 35.0%
AATACCACGGTGATAAATTG+GGG + chr7_3:75013836-75013855 Msa1123980:intron 35.0%
GGAGAAATGTATAGTAGCAT+AGG - chr7_3:75014020-75014039 None:intergenic 35.0%
CAATTAGAACACTGAACTGA+AGG - chr7_3:75014042-75014061 None:intergenic 35.0%
! GCACATGTACTTTTGTCTTT+TGG + chr7_3:75014123-75014142 Msa1123980:intron 35.0%
TGAAATTAGAACCAAGAAGG+GGG - chr7_3:75014553-75014572 None:intergenic 35.0%
CCATGAAATTAGAACCAAGA+AGG - chr7_3:75014556-75014575 None:intergenic 35.0%
!! CCTTCTTGGTTCTAATTTCA+TGG + chr7_3:75014553-75014572 Msa1123980:intron 35.0%
ACAAAACGTGTGGTGATAAA+AGG - chr7_3:75014718-75014737 None:intergenic 35.0%
!! ACTGGTTGATTTTCTCAATG+TGG + chr7_3:75014859-75014878 Msa1123980:intron 35.0%
ATCTAAAAAAACCCAGGACA+CGG - chr7_3:75015026-75015045 None:intergenic 35.0%
! AAGACCTAATTTGCATGTTG+GGG - chr7_3:75015191-75015210 None:intergenic 35.0%
! GAAGACCTAATTTGCATGTT+GGG - chr7_3:75015192-75015211 None:intergenic 35.0%
! AGAAGACCTAATTTGCATGT+TGG - chr7_3:75015193-75015212 None:intergenic 35.0%
AAACTAAAACGACTCAGTAC+AGG - chr7_3:75015426-75015445 None:intergenic 35.0%
ACCATAGAAAGATTATTGGG+GGG - chr7_3:75015721-75015740 None:intergenic 35.0%
GACCATAGAAAGATTATTGG+GGG - chr7_3:75015722-75015741 None:intergenic 35.0%
GGACCATAGAAAGATTATTG+GGG - chr7_3:75015723-75015742 None:intergenic 35.0%
GTGGACCATAGAAAGATTAT+TGG - chr7_3:75015725-75015744 None:intergenic 35.0%
AAGAAAATTCTTCCTCGTCT+TGG + chr7_3:75016053-75016072 Msa1123980:exon 35.0%
CAAAATCAGGAGAGAGAAAA+GGG - chr7_3:75016143-75016162 None:intergenic 35.0%
! ATGCACTTTTCAGCAAAATC+AGG - chr7_3:75016156-75016175 None:intergenic 35.0%
!! TTTTGCTGAAAAGTGCATCT+TGG + chr7_3:75016158-75016177 Msa1123980:three_prime_UTR 35.0%
! AAAAGTGCATCTTGGTTCTT+TGG + chr7_3:75016166-75016185 Msa1123980:three_prime_UTR 35.0%
ACTCAATCACCAAGAAGAAG+AGG + chr7_3:75011950-75011969 Msa1123980:CDS 40.0%
TCGGTTGTTTGTTCAGCTTT+GGG - chr7_3:75012020-75012039 None:intergenic 40.0%
AAGATAATGATCCTGCTGCT+CGG - chr7_3:75012039-75012058 None:intergenic 40.0%
AGCAGGATCATTATCTTGGA+TGG + chr7_3:75012042-75012061 Msa1123980:CDS 40.0%
! TGCTGCAAAAGTGATCGTTT+TGG - chr7_3:75012160-75012179 None:intergenic 40.0%
AGACTGATGTCGTTCATCAT+TGG + chr7_3:75012779-75012798 Msa1123980:intron 40.0%
!! AGTATGAAGCGAAAGTGCTT+TGG + chr7_3:75012933-75012952 Msa1123980:intron 40.0%
GATACATGCTAGGTCTTCTT+GGG + chr7_3:75013038-75013057 Msa1123980:intron 40.0%
TGTGCTGTATGGAAGCAATA+TGG + chr7_3:75013075-75013094 Msa1123980:CDS 40.0%
GAGAGACTTCATTCTAATCC+TGG + chr7_3:75013097-75013116 Msa1123980:CDS 40.0%
CATTCTAATCCTGGGACATT+TGG + chr7_3:75013106-75013125 Msa1123980:CDS 40.0%
GTGATTGGGAATTCATGCTT+TGG + chr7_3:75013160-75013179 Msa1123980:CDS 40.0%
TTGGGAATTCATGCTTTGGT+TGG + chr7_3:75013164-75013183 Msa1123980:CDS 40.0%
GCCACATCACAAATCACAAT+AGG - chr7_3:75013312-75013331 None:intergenic 40.0%
!! ACTGAACAACTGGTTTGGTT+CGG - chr7_3:75013479-75013498 None:intergenic 40.0%
ACCAAACCAGTTGTTCAGTT+TGG + chr7_3:75013480-75013499 Msa1123980:intron 40.0%
ACCAAACTGAACAACTGGTT+TGG - chr7_3:75013484-75013503 None:intergenic 40.0%
AATACCTTGCCCACTCAATA+CGG - chr7_3:75013785-75013804 None:intergenic 40.0%
! CAGTTAGCTATTGATGGTCA+TGG - chr7_3:75013809-75013828 None:intergenic 40.0%
! TTTTCCCCAATTTATCACCG+TGG - chr7_3:75013843-75013862 None:intergenic 40.0%
AAAATAGCTGTATAGAGGGC+AGG + chr7_3:75013901-75013920 Msa1123980:intron 40.0%
AGAACTAGCATATAGAGCGT+AGG + chr7_3:75013941-75013960 Msa1123980:intron 40.0%
ATAGAGCGTAGGTAAGTAAG+TGG + chr7_3:75013952-75013971 Msa1123980:intron 40.0%
AGGTAAGTAAGTGGTGTCTA+AGG + chr7_3:75013961-75013980 Msa1123980:intron 40.0%
! AGTAGCATAGGGCATTCTAA+AGG - chr7_3:75014008-75014027 None:intergenic 40.0%
GTCAAGAAAACAACAAGGCA+AGG - chr7_3:75014203-75014222 None:intergenic 40.0%
!! TTTTCTGTGATTTGTCGCGT+CGG - chr7_3:75014424-75014443 None:intergenic 40.0%
GAAATTAGAACCAAGAAGGG+GGG - chr7_3:75014552-75014571 None:intergenic 40.0%
AAACGTGTGGTGATAAAAGG+TGG - chr7_3:75014715-75014734 None:intergenic 40.0%
ACTACTATAAACGTGTGGTG+TGG - chr7_3:75014800-75014819 None:intergenic 40.0%
CGGCTAATCTAAAAAAACCC+AGG - chr7_3:75015032-75015051 None:intergenic 40.0%
GGTCTTCTACTATGTTAAGC+TGG + chr7_3:75015205-75015224 Msa1123980:intron 40.0%
TCCAAGTAGTTCCGTTACAA+TGG + chr7_3:75015376-75015395 Msa1123980:intron 40.0%
! TCCATTGTAACGGAACTACT+TGG - chr7_3:75015380-75015399 None:intergenic 40.0%
ATCTCATTGCTCCACTAATC+TGG - chr7_3:75015679-75015698 None:intergenic 40.0%
ATAGAAAGATTATTGGGGGG+GGG - chr7_3:75015718-75015737 None:intergenic 40.0%
CATAGAAAGATTATTGGGGG+GGG - chr7_3:75015719-75015738 None:intergenic 40.0%
CCATAGAAAGATTATTGGGG+GGG - chr7_3:75015720-75015739 None:intergenic 40.0%
! CACAACTTCCCTGATTTTCA+AGG - chr7_3:75015804-75015823 None:intergenic 40.0%
TGAAAATCAGGGAAGTTGTG+AGG + chr7_3:75015804-75015823 Msa1123980:intron 40.0%
! GAAGTTGTGAGGCACTTAAT+AGG + chr7_3:75015815-75015834 Msa1123980:CDS 40.0%
AGGCACTTAATAGGTCATGT+GGG + chr7_3:75015824-75015843 Msa1123980:CDS 40.0%
CGGAAGCTATTTGGAAAATG+AGG + chr7_3:75015852-75015871 Msa1123980:CDS 40.0%
CTTCAATGCACAACCAGTAT+TGG + chr7_3:75015987-75016006 Msa1123980:CDS 40.0%
AAAATTCTTCCTCGTCTTGG+AGG + chr7_3:75016056-75016075 Msa1123980:three_prime_UTR 40.0%
AGAGAAAAGGGAGCAAATGA+CGG - chr7_3:75016131-75016150 None:intergenic 40.0%
GCAAAATCAGGAGAGAGAAA+AGG - chr7_3:75016144-75016163 None:intergenic 40.0%
! GCATCTTGGTTCTTTGGATT+TGG + chr7_3:75016172-75016191 Msa1123980:three_prime_UTR 40.0%
! ATTAAGGGCATGGTTCTGTA+TGG + chr7_3:75016323-75016342 Msa1123980:three_prime_UTR 40.0%
!! GTTGTTTGTTCAGCTTTGGG+AGG - chr7_3:75012017-75012036 None:intergenic 45.0%
CTCGGTTGTTTGTTCAGCTT+TGG - chr7_3:75012021-75012040 None:intergenic 45.0%
GAGCAGCAGGATCATTATCT+TGG + chr7_3:75012038-75012057 Msa1123980:CDS 45.0%
TTCCAAGGAGAACGAGGAAT+GGG - chr7_3:75012113-75012132 None:intergenic 45.0%
GATGAACGACATCAGTCTCT+TGG - chr7_3:75012777-75012796 None:intergenic 45.0%
CCTTAATAAGCAGTCCAACG+TGG - chr7_3:75012832-75012851 None:intergenic 45.0%
CCACGTTGGACTGCTTATTA+AGG + chr7_3:75012829-75012848 Msa1123980:intron 45.0%
GGTTGAACTGGATACATGCT+AGG + chr7_3:75013028-75013047 Msa1123980:intron 45.0%
GGATACATGCTAGGTCTTCT+TGG + chr7_3:75013037-75013056 Msa1123980:intron 45.0%
TTGCTTCCATACAGCACACA+AGG - chr7_3:75013073-75013092 None:intergenic 45.0%
CGGCTATGATATGAAAGCCA+GGG - chr7_3:75013202-75013221 None:intergenic 45.0%
ACGGCTATGATATGAAAGCC+AGG - chr7_3:75013203-75013222 None:intergenic 45.0%
CCTCTAAATTGAACCTGCGA+CGG - chr7_3:75013234-75013253 None:intergenic 45.0%
! ACACTTTGGTTCATTCGGCT+TGG - chr7_3:75013408-75013427 None:intergenic 45.0%
GAGCGAACGAGTTTACACTT+TGG - chr7_3:75013422-75013441 None:intergenic 45.0%
AGTGCACCAAACTGAACAAC+TGG - chr7_3:75013489-75013508 None:intergenic 45.0%
! TTTTGAACGCCCGTATTGAG+TGG + chr7_3:75013772-75013791 Msa1123980:intron 45.0%
TTTGAACGCCCGTATTGAGT+GGG + chr7_3:75013773-75013792 Msa1123980:intron 45.0%
ATACCTTGCCCACTCAATAC+GGG - chr7_3:75013784-75013803 None:intergenic 45.0%
GTGGTAACATGTACGCTACA+AGG + chr7_3:75013867-75013886 Msa1123980:intron 45.0%
GTCTAAGGAGTAGAGTACAG+AGG + chr7_3:75013976-75013995 Msa1123980:intron 45.0%
GACAACAGCAGCCATATAGA+TGG - chr7_3:75014073-75014092 None:intergenic 45.0%
CGTCTGTGCATCATAGACAA+GGG - chr7_3:75014244-75014263 None:intergenic 45.0%
TTGTCTATGATGCACAGACG+CGG + chr7_3:75014244-75014263 Msa1123980:intron 45.0%
!! AAAGGTGTGGTGGTGGAAAA+CGG - chr7_3:75014506-75014525 None:intergenic 45.0%
GCAAAGCAGAGGAACAGAAA+CGG - chr7_3:75014600-75014619 None:intergenic 45.0%
CAAAGTCACAAAACGTGTGG+TGG - chr7_3:75014649-75014668 None:intergenic 45.0%
GGACAAAGTCACAAAACGTG+TGG - chr7_3:75014652-75014671 None:intergenic 45.0%
CAAGGACAAGACAAAACGTG+TGG - chr7_3:75014728-75014747 None:intergenic 45.0%
ACTATAAACGTGTGGTGTGG+TGG - chr7_3:75014797-75014816 None:intergenic 45.0%
CACTCCCCAACATGCAAATT+AGG + chr7_3:75015184-75015203 Msa1123980:intron 45.0%
! GTAACGGAACTACTTGGACA+AGG - chr7_3:75015374-75015393 None:intergenic 45.0%
TAGAAAGATTATTGGGGGGG+GGG - chr7_3:75015717-75015736 None:intergenic 45.0%
CCCCCCCAATAATCTTTCTA+TGG + chr7_3:75015717-75015736 Msa1123980:intron 45.0%
! GAGGCACTTAATAGGTCATG+TGG + chr7_3:75015823-75015842 Msa1123980:CDS 45.0%
GCAGCGTGAACATTATGAGT+TGG + chr7_3:75015876-75015895 Msa1123980:CDS 45.0%
GTCTGTGCTCTTTGTCAAGA+AGG + chr7_3:75015931-75015950 Msa1123980:CDS 45.0%
GGGGGAATCATAACCAATAC+TGG - chr7_3:75016003-75016022 None:intergenic 45.0%
!! GTATTGGTTATGATTCCCCC+AGG + chr7_3:75016003-75016022 Msa1123980:CDS 45.0%
CTAGTCATAAAACAAGGGGC+CGG - chr7_3:75016468-75016487 None:intergenic 45.0%
GAGGACTTGCCTCTTCTTCT+TGG - chr7_3:75011962-75011981 None:intergenic 50.0%
!! GTTTGTTCAGCTTTGGGAGG+TGG - chr7_3:75012014-75012033 None:intergenic 50.0%
TGAACAAACAACCGAGCAGC+AGG + chr7_3:75012025-75012044 Msa1123980:CDS 50.0%
GTTCCAAGGAGAACGAGGAA+TGG - chr7_3:75012114-75012133 None:intergenic 50.0%
CAGTGATTGCCAAATGTCCC+AGG - chr7_3:75013118-75013137 None:intergenic 50.0%
GTTGGAATTGTCTTGCACCC+TGG + chr7_3:75013182-75013201 Msa1123980:CDS 50.0%
! ACCTGCGACGGATTTCAGTA+CGG - chr7_3:75013222-75013241 None:intergenic 50.0%
CCGTCGCAGGTTCAATTTAG+AGG + chr7_3:75013231-75013250 Msa1123980:CDS 50.0%
! TGATTTGTGATGTGGCTGCG+AGG + chr7_3:75013316-75013335 Msa1123980:intron 50.0%
TGGCTGCGAGGAAGAATTGT+AGG + chr7_3:75013328-75013347 Msa1123980:intron 50.0%
AGGCAGGGGTGGTCAAAATT+TGG + chr7_3:75013368-75013387 Msa1123980:intron 50.0%
ATAGAGGGCAGGCAAGTAAG+TGG + chr7_3:75013912-75013931 Msa1123980:intron 50.0%
GGAGTAGAGTACAGAGGTCA+AGG + chr7_3:75013982-75014001 Msa1123980:intron 50.0%
GCGTCTGTGCATCATAGACA+AGG - chr7_3:75014245-75014264 None:intergenic 50.0%
TTTCCACCACCACACCTTTC+CGG + chr7_3:75014507-75014526 Msa1123980:intron 50.0%
TTAGAACCAAGAAGGGGGGA+AGG - chr7_3:75014548-75014567 None:intergenic 50.0%
AACACGAAGCAGCAAAGCAG+AGG - chr7_3:75014611-75014630 None:intergenic 50.0%
AGTCACAAAACGTGTGGTGG+TGG - chr7_3:75014646-75014665 None:intergenic 50.0%
AAAAACCCAGGACACGGACA+CGG - chr7_3:75015020-75015039 None:intergenic 50.0%
GTACAAGGGTCTACGAAGCA+CGG - chr7_3:75015089-75015108 None:intergenic 50.0%
AGAAAGATTATTGGGGGGGG+GGG - chr7_3:75015716-75015735 None:intergenic 50.0%
! AATAGGTCATGTGGGTGCTG+CGG + chr7_3:75015832-75015851 Msa1123980:CDS 50.0%
TGTGCATTGAAGCCAGGATG+AGG - chr7_3:75015979-75015998 None:intergenic 50.0%
ACTGGTTGTGCATTGAAGCC+AGG - chr7_3:75015985-75016004 None:intergenic 50.0%
AGAATAGCACCTCCAAGACG+AGG - chr7_3:75016068-75016087 None:intergenic 50.0%
TATCTTGGATGGACCGCCGA+TGG + chr7_3:75012053-75012072 Msa1123980:CDS 55.0%
ATCTTGGATGGACCGCCGAT+GGG + chr7_3:75012054-75012073 Msa1123980:CDS 55.0%
ATGACGCTTCCATGGCCCAT+CGG - chr7_3:75012083-75012102 None:intergenic 55.0%
!! ATGGGCCATGGAAGCGTCAT+GGG + chr7_3:75012083-75012102 Msa1123980:CDS 55.0%
AGCCCATTCCTCGTTCTCCT+TGG + chr7_3:75012108-75012127 Msa1123980:CDS 55.0%
GAGGAGTTCCAAGGAGAACG+AGG - chr7_3:75012119-75012138 None:intergenic 55.0%
TTGGCCAAGACAAGCGCAGA+CGG - chr7_3:75012141-75012160 None:intergenic 55.0%
TTGTGGACCTCCTTCGTACG+TGG + chr7_3:75012535-75012554 Msa1123980:intron 55.0%
GCTAGGTCTTCTTGGGAGTG+TGG + chr7_3:75013045-75013064 Msa1123980:intron 55.0%
GTGGCTCCTTGTGTGCTGTA+TGG + chr7_3:75013064-75013083 Msa1123980:CDS 55.0%
GGTTTACACCAGAGCGGTGT+CGG - chr7_3:75014403-75014422 None:intergenic 55.0%
CAGAGGAACAGAAACGGCGA+CGG - chr7_3:75014594-75014613 None:intergenic 55.0%
!! CACAAAACGTGTGGTGGTGG+TGG - chr7_3:75014643-75014662 None:intergenic 55.0%
ATATAGCCGTGTCCGTGTCC+TGG + chr7_3:75015011-75015030 Msa1123980:intron 55.0%
TATAGCCGTGTCCGTGTCCT+GGG + chr7_3:75015012-75015031 Msa1123980:intron 55.0%
AAAGATTATTGGGGGGGGGG+GGG - chr7_3:75015714-75015733 None:intergenic 55.0%
GAAAGATTATTGGGGGGGGG+GGG - chr7_3:75015715-75015734 None:intergenic 55.0%
! TGGGTGCTGCGGAAGCTATT+TGG + chr7_3:75015843-75015862 Msa1123980:CDS 55.0%
! AGCCAGGATGAGGCACTCTA+CGG - chr7_3:75015969-75015988 None:intergenic 55.0%
!! ACCCATGGTTTGCTCTCCTG+GGG - chr7_3:75016022-75016041 None:intergenic 55.0%
!! GACCCATGGTTTGCTCTCCT+GGG - chr7_3:75016023-75016042 None:intergenic 55.0%
GAGAGCAAACCATGGGTCGT+GGG + chr7_3:75016025-75016044 Msa1123980:CDS 55.0%
AGAGCAAACCATGGGTCGTG+GGG + chr7_3:75016026-75016045 Msa1123980:CDS 55.0%
ATGGCCCATCGGAAGCCCAT+CGG - chr7_3:75012072-75012091 None:intergenic 60.0%
!! GATGGGCCATGGAAGCGTCA+TGG + chr7_3:75012082-75012101 Msa1123980:CDS 60.0%
GCTGACCCATGACGCTTCCA+TGG - chr7_3:75012091-75012110 None:intergenic 60.0%
TCCTCCGTCTGCGCTTGTCT+TGG + chr7_3:75012134-75012153 Msa1123980:CDS 60.0%
! TGGTGGACCACGTACGAAGG+AGG - chr7_3:75012545-75012564 None:intergenic 60.0%
!! CCATGGTGGACCACGTACGA+AGG - chr7_3:75012548-75012567 None:intergenic 60.0%
CCTTCGTACGTGGTCCACCA+TGG + chr7_3:75012545-75012564 Msa1123980:intron 60.0%
GCCGTACTGAAATCCGTCGC+AGG + chr7_3:75013218-75013237 Msa1123980:CDS 60.0%
AGGTGACCAGAAGCCCTGAG+AGG + chr7_3:75013348-75013367 Msa1123980:intron 60.0%
ACCAGAAGCCCTGAGAGGCA+GGG + chr7_3:75013353-75013372 Msa1123980:intron 60.0%
TTGACCACCCCTGCCTCTCA+GGG - chr7_3:75013364-75013383 None:intergenic 60.0%
TTTGACCACCCCTGCCTCTC+AGG - chr7_3:75013365-75013384 None:intergenic 60.0%
ACGCCCGTATTGAGTGGGCA+AGG + chr7_3:75013778-75013797 Msa1123980:intron 60.0%
CGTACGATTCGCGTCAGACG+CGG + chr7_3:75014327-75014346 Msa1123980:intron 60.0%
!! CGCGTCGGTTTACACCAGAG+CGG - chr7_3:75014409-75014428 None:intergenic 60.0%
GAAGGGGGGAAGGAAGCAGA+CGG - chr7_3:75014538-75014557 None:intergenic 60.0%
CTGCTTCCTTCCCCCCTTCT+TGG + chr7_3:75014539-75014558 Msa1123980:intron 60.0%
ACGAAGCACGGACACGGACA+CGG - chr7_3:75015077-75015096 None:intergenic 60.0%
GGGTCTACGAAGCACGGACA+CGG - chr7_3:75015083-75015102 None:intergenic 60.0%
AAGATTATTGGGGGGGGGGG+GGG - chr7_3:75015713-75015732 None:intergenic 60.0%
! CAGGATGAGGCACTCTACGG+CGG - chr7_3:75015966-75015985 None:intergenic 60.0%
TCCCCCAGGAGAGCAAACCA+TGG + chr7_3:75016017-75016036 Msa1123980:CDS 60.0%
!! CCCATGGTTTGCTCTCCTGG+GGG - chr7_3:75016021-75016040 None:intergenic 60.0%
CCCCCAGGAGAGCAAACCAT+GGG + chr7_3:75016018-75016037 Msa1123980:CDS 60.0%
!! CGACCCATGGTTTGCTCTCC+TGG - chr7_3:75016024-75016043 None:intergenic 60.0%
GGAGAGCAAACCATGGGTCG+TGG + chr7_3:75016024-75016043 Msa1123980:CDS 60.0%
TCTTCAAGCCCCACGACCCA+TGG - chr7_3:75016037-75016056 None:intergenic 60.0%
! ACCGCCGATGGGCTTCCGAT+GGG + chr7_3:75012065-75012084 Msa1123980:CDS 65.0%
! GATGGGCTTCCGATGGGCCA+TGG + chr7_3:75012071-75012090 Msa1123980:CDS 65.0%
GCGCAGACGGAGGAGTTCCA+AGG - chr7_3:75012128-75012147 None:intergenic 65.0%
GCCAAGACAAGCGCAGACGG+AGG - chr7_3:75012138-75012157 None:intergenic 65.0%
GACCAGAAGCCCTGAGAGGC+AGG + chr7_3:75013352-75013371 Msa1123980:intron 65.0%
CCAGAAGCCCTGAGAGGCAG+GGG + chr7_3:75013354-75013373 Msa1123980:intron 65.0%
TGTCCGACGCGGTTCCGACA+CGG + chr7_3:75014288-75014307 Msa1123980:intron 65.0%
TGTCGTACGCGCGTCCGTGT+CGG - chr7_3:75014305-75014324 None:intergenic 65.0%
ACACGGATCCGACACCGCTC+TGG + chr7_3:75014392-75014411 Msa1123980:intron 65.0%
CACGACACGGACACGGGACA+CGG - chr7_3:75015052-75015071 None:intergenic 65.0%
ACGGGACACGACACGGACAC+GGG - chr7_3:75015058-75015077 None:intergenic 65.0%
CACGGGACACGACACGGACA+CGG - chr7_3:75015059-75015078 None:intergenic 65.0%
CACGGACACGGGACACGACA+CGG - chr7_3:75015065-75015084 None:intergenic 65.0%
CGAAGCACGGACACGGACAC+GGG - chr7_3:75015076-75015095 None:intergenic 65.0%
! CGCCGTAGAGTGCCTCATCC+TGG + chr7_3:75015964-75015983 Msa1123980:CDS 65.0%
! GACCGCCGATGGGCTTCCGA+TGG + chr7_3:75012064-75012083 Msa1123980:CDS 70.0%
GCCCATCGGAAGCCCATCGG+CGG - chr7_3:75012069-75012088 None:intergenic 70.0%
CCCCTGCCTCTCAGGGCTTC+TGG - chr7_3:75013357-75013376 None:intergenic 70.0%
GAAGCCCTGAGAGGCAGGGG+TGG + chr7_3:75013357-75013376 Msa1123980:intron 70.0%
GGCTGAGATCCGCCGTGTCG+CGG + chr7_3:75014265-75014284 Msa1123980:intron 70.0%
CGTCCGTGTCGGAACCGCGT+CGG - chr7_3:75014294-75014313 None:intergenic 70.0%
! GCGCCGGAAAGGTGTGGTGG+TGG - chr7_3:75014513-75014532 None:intergenic 70.0%
AAGGAAGCAGACGGCGGCGC+CGG - chr7_3:75014529-75014548 None:intergenic 70.0%
GGGGGGAAGGAAGCAGACGG+CGG - chr7_3:75014535-75014554 None:intergenic 70.0%
CGTCGGACACCGCGACACGG+CGG - chr7_3:75014277-75014296 None:intergenic 75.0%
CCGCGTCGGACACCGCGACA+CGG - chr7_3:75014280-75014299 None:intergenic 75.0%
CCGTGTCGCGGTGTCCGACG+CGG + chr7_3:75014277-75014296 Msa1123980:intron 75.0%
! GCGGCGCCGGAAAGGTGTGG+TGG - chr7_3:75014516-75014535 None:intergenic 75.0%
! ACGGCGGCGCCGGAAAGGTG+TGG - chr7_3:75014519-75014538 None:intergenic 75.0%
! AGCAGACGGCGGCGCCGGAA+AGG - chr7_3:75014524-75014543 None:intergenic 75.0%
! TGGGGGGGGGGGGGGCAGAA+AGG - chr7_3:75015705-75015724 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 75011766 75016510 75011766 ID=Msa1123980;Name=Msa1123980
chr7_3 mRNA 75011766 75016510 75011766 ID=Msa1123980-mRNA-1;Parent=Msa1123980;Name=Msa1123980-mRNA-1;_AED=0.16;_eAED=0.16;_QI=167|1|1|1|1|1|3|457|234
chr7_3 exon 75011766 75012194 75011766 ID=Msa1123980-mRNA-1:exon:20121;Parent=Msa1123980-mRNA-1
chr7_3 exon 75013050 75013252 75013050 ID=Msa1123980-mRNA-1:exon:20122;Parent=Msa1123980-mRNA-1
chr7_3 exon 75015814 75016510 75015814 ID=Msa1123980-mRNA-1:exon:20123;Parent=Msa1123980-mRNA-1
chr7_3 five_prime_UTR 75011766 75011932 75011766 ID=Msa1123980-mRNA-1:five_prime_utr;Parent=Msa1123980-mRNA-1
chr7_3 CDS 75011933 75012194 75011933 ID=Msa1123980-mRNA-1:cds;Parent=Msa1123980-mRNA-1
chr7_3 CDS 75013050 75013252 75013050 ID=Msa1123980-mRNA-1:cds;Parent=Msa1123980-mRNA-1
chr7_3 CDS 75015814 75016053 75015814 ID=Msa1123980-mRNA-1:cds;Parent=Msa1123980-mRNA-1
chr7_3 three_prime_UTR 75016054 75016510 75016054 ID=Msa1123980-mRNA-1:three_prime_utr;Parent=Msa1123980-mRNA-1
Gene Sequence

>Msa1123980

ATGGCTGAAGAGAAAAAACTCAATCACCAAGAAGAAGAGGCAAGTCCTCTTCTCAAACAACAACAACAACAACAACAACCACCTCCCAAAGCTGAACAAACAACCGAGCAGCAGGATCATTATCTTGGATGGACCGCCGATGGGCTTCCGATGGGCCATGGAAGCGTCATGGGTCAGCCCATTCCTCGTTCTCCTTGGAACTCCTCCGTCTGCGCTTGTCTTGGCCAAAACGATCACTTTTGCAGCAGCGATCTTGAAGTTTGTCTTCTTGGGAGTGTGGCTCCTTGTGTGCTGTATGGAAGCAATATGGAGAGACTTCATTCTAATCCTGGGACATTTGGCAATCACTGTTTGCATTATTCTGGACTGTATGTGATTGGGAATTCATGCTTTGGTTGGAATTGTCTTGCACCCTGGCTTTCATATCATAGCCGTACTGAAATCCGTCGCAGGTTCAATTTAGAGGGAAGTTGTGAGGCACTTAATAGGTCATGTGGGTGCTGCGGAAGCTATTTGGAAAATGAGGAGCAGCGTGAACATTATGAGTTGGCATGTGACTTTGCAACTCATGTCTTCTGTCATGTCTGTGCTCTTTGTCAAGAAGGTCGTGAGCTCCGCCGTAGAGTGCCTCATCCTGGCTTCAATGCACAACCAGTATTGGTTATGATTCCCCCAGGAGAGCAAACCATGGGTCGTGGGGCTTGA
Protein sequence

>Msa1123980

MAEEKKLNHQEEEASPLLKQQQQQQQPPPKAEQTTEQQDHYLGWTADGLPMGHGSVMGQPIPRSPWNSSVCACLGQNDHFCSSDLEVCLLGSVAPCVLYGSNMERLHSNPGTFGNHCLHYSGLYVIGNSCFGWNCLAPWLSYHSRTEIRRRFNLEGSCEALNRSCGCCGSYLENEEQREHYELACDFATHVFCHVCALCQEGRELRRRVPHPGFNAQPVLVMIPPGEQTMGRGA*