Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364730 | XP_003603508.2 | 95.699 | 465 | 13 | 1 | 1 | 465 | 1 | 458 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364730 | sp|F4IDY7|DDR4_ARATH | 45.724 | 304 | 160 | 4 | 33 | 334 | 133 | 433 | 5.79e-83 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364730 | G7JCA6 | 95.699 | 465 | 13 | 1 | 1 | 465 | 1 | 458 | 0.0 | 910 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1364730 | 0.801918 | 7.178520e-49 | -8.615850e-47 |
| Msa0006380 | Msa1364730 | 0.813634 | 2.317799e-51 | -8.615850e-47 |
| Msa0017510 | Msa1364730 | 0.805448 | 1.328140e-49 | -8.615850e-47 |
| Msa0020410 | Msa1364730 | 0.814664 | 1.372900e-51 | -8.615850e-47 |
| Msa0026710 | Msa1364730 | 0.817169 | 3.791314e-52 | -8.615850e-47 |
| Msa0043980 | Msa1364730 | 0.810126 | 1.346031e-50 | -8.615850e-47 |
| Msa0059110 | Msa1364730 | 0.815901 | 7.289430e-52 | -8.615850e-47 |
| Msa0074700 | Msa1364730 | 0.800503 | 1.397685e-48 | -8.615850e-47 |
| Msa0084380 | Msa1364730 | 0.817526 | 3.151114e-52 | -8.615850e-47 |
| Msa0090360 | Msa1364730 | 0.801740 | 7.808542e-49 | -8.615850e-47 |
| Msa0104800 | Msa1364730 | 0.805737 | 1.155306e-49 | -8.615850e-47 |
| Msa0113750 | Msa1364730 | 0.802016 | 6.851033e-49 | -8.615850e-47 |
| Msa0114060 | Msa1364730 | 0.822430 | 2.378326e-53 | -8.615850e-47 |
| Msa0115400 | Msa1364730 | 0.808275 | 3.354623e-50 | -8.615850e-47 |
| Msa1348890 | Msa1364730 | 0.800650 | 1.304510e-48 | -8.615850e-47 |
| Msa1352760 | Msa1364730 | 0.813528 | 2.445110e-51 | -8.615850e-47 |
| Msa1353980 | Msa1364730 | 0.812711 | 3.694785e-51 | -8.615850e-47 |
| Msa1358250 | Msa1364730 | 0.807788 | 4.260561e-50 | -8.615850e-47 |
| Msa1359040 | Msa1364730 | 0.803552 | 3.301386e-49 | -8.615850e-47 |
| Msa1364730 | Msa1374470 | 0.813258 | 2.803827e-51 | -8.615850e-47 |
| Msa1364730 | Msa1377500 | 0.809703 | 1.659686e-50 | -8.615850e-47 |
| Msa1364730 | Msa1386780 | 0.802664 | 5.038680e-49 | -8.615850e-47 |
| Msa1364730 | Msa1392780 | 0.826768 | 2.262513e-54 | -8.615850e-47 |
| Msa1364730 | Msa1397120 | 0.802084 | 6.636027e-49 | -8.615850e-47 |
| Msa1364730 | Msa1410100 | 0.808638 | 2.806433e-50 | -8.615850e-47 |
| Msa1364730 | Msa1411020 | 0.825110 | 5.605038e-54 | -8.615850e-47 |
| Msa1364730 | Msa1420490 | 0.814339 | 1.620588e-51 | -8.615850e-47 |
| Msa1364730 | Msa1423390 | 0.813832 | 2.096106e-51 | -8.615850e-47 |
| Msa1364730 | Msa1424290 | 0.824653 | 7.183054e-54 | -8.615850e-47 |
| Msa1364730 | Msa1424450 | 0.807752 | 4.334976e-50 | -8.615850e-47 |
| Msa1364730 | Msa1427230 | 0.807663 | 4.527967e-50 | -8.615850e-47 |
| Msa1364730 | Msa1432420 | 0.816262 | 6.053825e-52 | -8.615850e-47 |
| Msa1364730 | Msa1434350 | 0.819580 | 1.077961e-52 | -8.615850e-47 |
| Msa1364730 | Msa1439320 | 0.823457 | 1.370927e-53 | -8.615850e-47 |
| Msa1364730 | Msa1440370 | 0.814235 | 1.708021e-51 | -8.615850e-47 |
| Msa1364730 | Msa1440810 | 0.812445 | 4.225199e-51 | -8.615850e-47 |
| Msa1364730 | Msa1451160 | 0.812521 | 4.065949e-51 | -8.615850e-47 |
| Msa1364730 | Msa1451550 | 0.804302 | 2.305791e-49 | -8.615850e-47 |
| Msa1364730 | Msa1452240 | 0.817083 | 3.963409e-52 | -8.615850e-47 |
| Msa1364730 | Msa1457920 | 0.801361 | 9.334970e-49 | -8.615850e-47 |
| Msa1364730 | Msa1466540 | 0.819630 | 1.049724e-52 | -8.615850e-47 |
| Msa0607050 | Msa1364730 | 0.832244 | 1.056009e-55 | -8.615850e-47 |
| Msa0610430 | Msa1364730 | 0.806729 | 7.139861e-50 | -8.615850e-47 |
| Msa0625720 | Msa1364730 | 0.834217 | 3.405548e-56 | -8.615850e-47 |
| Msa0631360 | Msa1364730 | 0.806442 | 8.210426e-50 | -8.615850e-47 |
| Msa0649490 | Msa1364730 | 0.827738 | 1.325111e-54 | -8.615850e-47 |
| Msa0657580 | Msa1364730 | 0.816363 | 5.748434e-52 | -8.615850e-47 |
| Msa0663240 | Msa1364730 | 0.806827 | 6.807349e-50 | -8.615850e-47 |
| Msa0663390 | Msa1364730 | 0.827400 | 1.597821e-54 | -8.615850e-47 |
| Msa0665860 | Msa1364730 | 0.803789 | 2.948564e-49 | -8.615850e-47 |
| Msa0667050 | Msa1364730 | 0.807628 | 4.605294e-50 | -8.615850e-47 |
| Msa0673460 | Msa1364730 | 0.811485 | 6.837780e-51 | -8.615850e-47 |
| Msa0688480 | Msa1364730 | 0.816636 | 4.992746e-52 | -8.615850e-47 |
| Msa0689260 | Msa1364730 | 0.811310 | 7.465365e-51 | -8.615850e-47 |
| Msa0690150 | Msa1364730 | 0.827701 | 1.353158e-54 | -8.615850e-47 |
| Msa0692040 | Msa1364730 | -0.817352 | 3.448583e-52 | -8.615850e-47 |
| Msa0709400 | Msa1364730 | 0.840104 | 1.062685e-57 | -8.615850e-47 |
| Msa0715700 | Msa1364730 | 0.834102 | 3.638212e-56 | -8.615850e-47 |
| Msa0765910 | Msa1364730 | 0.807930 | 3.973300e-50 | -8.615850e-47 |
| Msa0771720 | Msa1364730 | 0.807461 | 4.997375e-50 | -8.615850e-47 |
| Msa0795080 | Msa1364730 | 0.800009 | 1.762027e-48 | -8.615850e-47 |
| Msa0820850 | Msa1364730 | 0.812010 | 5.256348e-51 | -8.615850e-47 |
| Msa0151180 | Msa1364730 | 0.802826 | 4.666893e-49 | -8.615850e-47 |
| Msa0157100 | Msa1364730 | 0.806774 | 6.986901e-50 | -8.615850e-47 |
| Msa0157290 | Msa1364730 | 0.805099 | 1.571713e-49 | -8.615850e-47 |
| Msa0160550 | Msa1364730 | 0.802813 | 4.695624e-49 | -8.615850e-47 |
| Msa0169310 | Msa1364730 | 0.801057 | 1.077351e-48 | -8.615850e-47 |
| Msa0205230 | Msa1364730 | 0.802882 | 4.542845e-49 | -8.615850e-47 |
| Msa0206010 | Msa1364730 | 0.811647 | 6.304539e-51 | -8.615850e-47 |
| Msa1247250 | Msa1364730 | 0.804697 | 1.907530e-49 | -8.615850e-47 |
| Msa1253020 | Msa1364730 | 0.845440 | 4.055039e-59 | -8.615850e-47 |
| Msa1254730 | Msa1364730 | 0.826886 | 2.120726e-54 | -8.615850e-47 |
| Msa1267430 | Msa1364730 | 0.820304 | 7.361065e-53 | -8.615850e-47 |
| Msa1284550 | Msa1364730 | 0.804476 | 2.120795e-49 | -8.615850e-47 |
| Msa1294820 | Msa1364730 | 0.808373 | 3.197025e-50 | -8.615850e-47 |
| Msa1303250 | Msa1364730 | 0.810140 | 1.336490e-50 | -8.615850e-47 |
| Msa1305340 | Msa1364730 | 0.817481 | 3.225597e-52 | -8.615850e-47 |
| Msa1305660 | Msa1364730 | 0.836375 | 9.707675e-57 | -8.615850e-47 |
| Msa1327680 | Msa1364730 | 0.808946 | 2.411575e-50 | -8.615850e-47 |
| Msa0366890 | Msa1364730 | 0.809663 | 1.693077e-50 | -8.615850e-47 |
| Msa0376310 | Msa1364730 | 0.804784 | 1.829130e-49 | -8.615850e-47 |
| Msa0385580 | Msa1364730 | 0.809600 | 1.746640e-50 | -8.615850e-47 |
| Msa0403970 | Msa1364730 | 0.809212 | 2.116033e-50 | -8.615850e-47 |
| Msa0405370 | Msa1364730 | 0.804863 | 1.761003e-49 | -8.615850e-47 |
| Msa0416300 | Msa1364730 | 0.806544 | 7.814556e-50 | -8.615850e-47 |
| Msa0433640 | Msa1364730 | 0.805830 | 1.104335e-49 | -8.615850e-47 |
| Msa0436760 | Msa1364730 | 0.802363 | 5.814416e-49 | -8.615850e-47 |
| Msa0439200 | Msa1364730 | 0.842359 | 2.712825e-58 | -8.615850e-47 |
| Msa0453200 | Msa1364730 | 0.811751 | 5.984775e-51 | -8.615850e-47 |
| Msa0479660 | Msa1364730 | 0.800170 | 1.633912e-48 | -8.615850e-47 |
| Msa0481530 | Msa1364730 | 0.837235 | 5.858604e-57 | -8.615850e-47 |
| Msa1012320 | Msa1364730 | 0.835345 | 1.770800e-56 | -8.615850e-47 |
| Msa1013400 | Msa1364730 | 0.819621 | 1.055157e-52 | -8.615850e-47 |
| Msa1014540 | Msa1364730 | 0.802423 | 5.650884e-49 | -8.615850e-47 |
| Msa1023920 | Msa1364730 | 0.821677 | 3.556238e-53 | -8.615850e-47 |
| Msa1046060 | Msa1364730 | 0.806969 | 6.353522e-50 | -8.615850e-47 |
| Msa1055680 | Msa1364730 | 0.821986 | 3.014924e-53 | -8.615850e-47 |
| Msa1063510 | Msa1364730 | 0.818397 | 2.002424e-52 | -8.615850e-47 |
| Msa1085800 | Msa1364730 | 0.987024 | 8.655275e-169 | -8.615850e-47 |
| Msa1093530 | Msa1364730 | 0.816162 | 6.373685e-52 | -8.615850e-47 |
| Msa1093840 | Msa1364730 | 0.812098 | 5.030308e-51 | -8.615850e-47 |
| Msa0243100 | Msa1364730 | 0.806182 | 9.313552e-50 | -8.615850e-47 |
| Msa0249690 | Msa1364730 | 0.810156 | 1.326252e-50 | -8.615850e-47 |
| Msa0264150 | Msa1364730 | 0.814402 | 1.568948e-51 | -8.615850e-47 |
| Msa0280090 | Msa1364730 | 0.813292 | 2.755305e-51 | -8.615850e-47 |
| Msa0287410 | Msa1364730 | 0.821401 | 4.118417e-53 | -8.615850e-47 |
| Msa0287650 | Msa1364730 | 0.806772 | 6.992372e-50 | -8.615850e-47 |
| Msa0291500 | Msa1364730 | 0.837394 | 5.335989e-57 | -8.615850e-47 |
| Msa0298700 | Msa1364730 | 0.801102 | 1.055038e-48 | -8.615850e-47 |
| Msa0326110 | Msa1364730 | 0.811411 | 7.097643e-51 | -8.615850e-47 |
| Msa0329350 | Msa1364730 | 0.817810 | 2.718402e-52 | -8.615850e-47 |
| Msa0334360 | Msa1364730 | 0.808437 | 3.098388e-50 | -8.615850e-47 |
| Msa0336420 | Msa1364730 | 0.809650 | 1.703448e-50 | -8.615850e-47 |
| Msa0347770 | Msa1364730 | 0.814004 | 1.921306e-51 | -8.615850e-47 |
| Msa0359030 | Msa1364730 | 0.800158 | 1.643522e-48 | -8.615850e-47 |
| Msa1107900 | Msa1364730 | 0.815345 | 9.695328e-52 | -8.615850e-47 |
| Msa1109680 | Msa1364730 | 0.806755 | 7.050506e-50 | -8.615850e-47 |
| Msa1124960 | Msa1364730 | 0.846388 | 2.240999e-59 | -8.615850e-47 |
| Msa1131220 | Msa1364730 | 0.803805 | 2.925824e-49 | -8.615850e-47 |
| Msa1144890 | Msa1364730 | 0.800712 | 1.267135e-48 | -8.615850e-47 |
| Msa1147970 | Msa1364730 | 0.831326 | 1.778876e-55 | -8.615850e-47 |
| Msa1167340 | Msa1364730 | 0.827514 | 1.500326e-54 | -8.615850e-47 |
| Msa1174040 | Msa1364730 | 0.808586 | 2.879142e-50 | -8.615850e-47 |
| Msa1181250 | Msa1364730 | 0.810979 | 8.805213e-51 | -8.615850e-47 |
| Msa1181330 | Msa1364730 | 0.806043 | 9.962898e-50 | -8.615850e-47 |
| Msa1189070 | Msa1364730 | 0.816970 | 4.202904e-52 | -8.615850e-47 |
| Msa1193290 | Msa1364730 | 0.813250 | 2.814399e-51 | -8.615850e-47 |
| Msa1218600 | Msa1364730 | 0.801435 | 9.017292e-49 | -8.615850e-47 |
| Msa0493480 | Msa1364730 | 0.862207 | 5.966003e-64 | -8.615850e-47 |
| Msa0493630 | Msa1364730 | 0.816134 | 6.466428e-52 | -8.615850e-47 |
| Msa0497210 | Msa1364730 | 0.802749 | 4.839567e-49 | -8.615850e-47 |
| Msa0498650 | Msa1364730 | 0.808585 | 2.881620e-50 | -8.615850e-47 |
| Msa0517110 | Msa1364730 | 0.826871 | 2.137904e-54 | -8.615850e-47 |
| Msa0520940 | Msa1364730 | 0.801005 | 1.104326e-48 | -8.615850e-47 |
| Msa0521430 | Msa1364730 | 0.809638 | 1.714315e-50 | -8.615850e-47 |
| Msa0523270 | Msa1364730 | 0.800598 | 1.336707e-48 | -8.615850e-47 |
| Msa0529890 | Msa1364730 | 0.836589 | 8.565750e-57 | -8.615850e-47 |
| Msa0548240 | Msa1364730 | 0.835290 | 1.828725e-56 | -8.615850e-47 |
| Msa0551890 | Msa1364730 | 0.800571 | 1.354005e-48 | -8.615850e-47 |
| Msa0556060 | Msa1364730 | 0.810778 | 9.731283e-51 | -8.615850e-47 |
| Msa0585560 | Msa1364730 | 0.830386 | 3.024405e-55 | -8.615850e-47 |
| Msa0590990 | Msa1364730 | 0.808757 | 2.646820e-50 | -8.615850e-47 |
| Msa0597330 | Msa1364730 | 0.813496 | 2.485078e-51 | -8.615850e-47 |
| Msa0861130 | Msa1364730 | 0.809753 | 1.619209e-50 | -8.615850e-47 |
| Msa0866550 | Msa1364730 | 0.811253 | 7.678273e-51 | -8.615850e-47 |
| Msa0871270 | Msa1364730 | 0.820842 | 5.539298e-53 | -8.615850e-47 |
| Msa0902760 | Msa1364730 | 0.815859 | 7.447763e-52 | -8.615850e-47 |
| Msa0938220 | Msa1364730 | 0.815386 | 9.495467e-52 | -8.615850e-47 |
| Msa0941190 | Msa1364730 | 0.803180 | 3.941676e-49 | -8.615850e-47 |
| Msa0959360 | Msa1364730 | 0.810181 | 1.309491e-50 | -8.615850e-47 |
| Msa0963270 | Msa1364730 | 0.837812 | 4.168684e-57 | -8.615850e-47 |
| Msa0968680 | Msa1364730 | 0.808124 | 3.613512e-50 | -8.615850e-47 |
| Msa0975340 | Msa1364730 | 0.803883 | 2.818591e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364730 | MtrunA17_Chr3g0138691 | 95.699 | 465 | 13 | 1 | 1 | 465 | 1 | 458 | 0.0 | 910 |
| Msa1364730 | MtrunA17_Chr4g0059821 | 45.307 | 309 | 160 | 4 | 32 | 334 | 123 | 428 | 2.05e-88 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364730 | AT5G25580.1 | 42.788 | 416 | 176 | 13 | 33 | 445 | 48 | 404 | 5.31e-91 | 282 |
| Msa1364730 | AT1G18950.1 | 45.724 | 304 | 160 | 4 | 33 | 334 | 133 | 433 | 5.88e-84 | 274 |
| Msa1364730 | AT1G18950.3 | 45.724 | 304 | 160 | 4 | 33 | 334 | 133 | 433 | 6.12e-84 | 274 |
| Msa1364730 | AT1G18950.2 | 45.724 | 304 | 160 | 4 | 33 | 334 | 133 | 433 | 6.34e-84 | 274 |
Find 128 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGTCAAACCCATGCTTTC+TGG | 0.107105 | tig0018186:-66120 | None:intergenic |
| CTTTGCGAAAAGAAGAAATT+TGG | 0.158020 | tig0018186:-64027 | None:intergenic |
| CCAGTATTTAACTTACATTT+TGG | 0.163335 | tig0018186:+66260 | Msa1364730:three_prime_UTR |
| CACTGCACGATTCTGATAAA+TGG | 0.200696 | tig0018186:+63401 | Msa1364730:CDS |
| AGATTCTATGGCAGTATTTC+GGG | 0.220624 | tig0018186:-66169 | None:intergenic |
| CCGATCCTCTGTTTCTATCT+TGG | 0.238076 | tig0018186:-65861 | None:intergenic |
| AGAATGTAGTCAGCAAAATT+TGG | 0.250852 | tig0018186:+66301 | Msa1364730:three_prime_UTR |
| CATCCTGAACGCGTGCGTTT+TGG | 0.257102 | tig0018186:-62082 | None:intergenic |
| CCAAAATGTAAGTTAAATAC+TGG | 0.264251 | tig0018186:-66260 | None:intergenic |
| CAGACAGTGATGATTCTAAA+AGG | 0.266844 | tig0018186:+65911 | Msa1364730:CDS |
| AGGCCTATTAATTACAGTTT+TGG | 0.281092 | tig0018186:+64716 | Msa1364730:CDS |
| TAGATTCTATGGCAGTATTT+CGG | 0.284305 | tig0018186:-66170 | None:intergenic |
| TTACCAAAACTGTAATTAAT+AGG | 0.297695 | tig0018186:-64719 | None:intergenic |
| GAATGTAGTCAGCAAAATTT+GGG | 0.319769 | tig0018186:+66302 | Msa1364730:three_prime_UTR |
| TTACTAGAGCGAACCCCTTT+TGG | 0.327324 | tig0018186:-66066 | None:intergenic |
| AGACCAAAACGCACGCGTTC+AGG | 0.342414 | tig0018186:+62079 | Msa1364730:CDS |
| TATCACTTCCCAACTTTCAA+TGG | 0.352203 | tig0018186:+64264 | Msa1364730:CDS |
| AGCTTATGATCGAACAATTA+AGG | 0.353605 | tig0018186:+65396 | Msa1364730:CDS |
| CAGCCTTTGCCCTTACGGTT+TGG | 0.355901 | tig0018186:-64239 | None:intergenic |
| AGGAACAATAGTAGATTCTA+TGG | 0.361419 | tig0018186:-66181 | None:intergenic |
| AACACCTTCTTCTTCTTCAA+TGG | 0.364346 | tig0018186:-62048 | None:intergenic |
| TTCAGAAAATTCGTCAAGAT+TGG | 0.371680 | tig0018186:-64300 | None:intergenic |
| AATATCTTACGTCAAGGAAA+TGG | 0.379845 | tig0018186:-62169 | None:intergenic |
| TCCGATTCATCCTCTGAATC+AGG | 0.392591 | tig0018186:-66201 | None:intergenic |
| GCATCATCACTCTCGGATAT+AGG | 0.394140 | tig0018186:-65943 | None:intergenic |
| TTTGCGAAAAGAAGAAATTT+GGG | 0.398176 | tig0018186:-64026 | None:intergenic |
| AGGTTAGCAAGAGAAGCATT+AGG | 0.402729 | tig0018186:-62367 | None:intergenic |
| TCAACTCGGTACCCTTTAGA+TGG | 0.404205 | tig0018186:-63597 | None:intergenic |
| GAGAAGTATACATACCTTCA+TGG | 0.408886 | tig0018186:-66395 | None:intergenic |
| CAGGTGTTTAGTCCATTACT+TGG | 0.411796 | tig0018186:+62295 | Msa1364730:intron |
| ATTAATGATGCTTTAAAAGA+AGG | 0.414751 | tig0018186:+64001 | Msa1364730:CDS |
| GCTTGACAAAATTAGAAATC+AGG | 0.416090 | tig0018186:+66556 | Msa1364730:three_prime_UTR |
| ATCACTTCCCAACTTTCAAT+GGG | 0.421965 | tig0018186:+64265 | Msa1364730:CDS |
| ATAAGCAGCCTTTGCCCTTA+CGG | 0.423236 | tig0018186:-64244 | None:intergenic |
| ATGGAACTCGCACATCCTAT+TGG | 0.427726 | tig0018186:+64065 | Msa1364730:CDS |
| CCATGCTTTCTGGAACAGTA+TGG | 0.428988 | tig0018186:-66110 | None:intergenic |
| CATGCAGTTTCTTATCCAAA+AGG | 0.435630 | tig0018186:+66051 | Msa1364730:CDS |
| CGCTCTAGTAAGCGGATAGC+TGG | 0.435706 | tig0018186:+66078 | Msa1364730:CDS |
| ATTACTTGGTAATGATTTGA+AGG | 0.436043 | tig0018186:+62309 | Msa1364730:CDS |
| CTCTTTGCTTTAGGTTGCTG+AGG | 0.438103 | tig0018186:+63557 | Msa1364730:intron |
| AAAGAGGCCTTTGGAATAGA+TGG | 0.441916 | tig0018186:+64046 | Msa1364730:CDS |
| AACTGACTACTTGGTGGCCA+TGG | 0.442271 | tig0018186:+63443 | Msa1364730:CDS |
| TCTCTCTCAACAACAACAAC+TGG | 0.443046 | tig0018186:+61898 | Msa1364730:five_prime_UTR |
| TTCAAAATTTCGAAATGTAA+AGG | 0.447168 | tig0018186:-62113 | None:intergenic |
| AGTGTTTCCCATTGAAAGTT+GGG | 0.447901 | tig0018186:-64272 | None:intergenic |
| TTCAGTTACGGTTGCGAAAG+AGG | 0.455323 | tig0018186:+62008 | Msa1364730:five_prime_UTR |
| TCGTGCAGTGCTTTACCAAC+AGG | 0.455675 | tig0018186:-63388 | None:intergenic |
| GTACAAGGAGCTTGATCCAT+TGG | 0.462789 | tig0018186:+63707 | Msa1364730:CDS |
| ATGCAGTTTCTTATCCAAAA+GGG | 0.465191 | tig0018186:+66052 | Msa1364730:CDS |
| AATCCACTTGTACCATCTAA+AGG | 0.467332 | tig0018186:+63585 | Msa1364730:CDS |
| GAATGATGAACATGTGAGTC+AGG | 0.470069 | tig0018186:+66002 | Msa1364730:CDS |
| AAGTCCGATCTCGATTTCTT+CGG | 0.471156 | tig0018186:-62338 | None:intergenic |
| AAACGCACGCGTTCAGGATG+AGG | 0.473464 | tig0018186:+62085 | Msa1364730:CDS |
| TTTCTATCTTGGTCAACAGC+AGG | 0.474906 | tig0018186:-65850 | None:intergenic |
| TCCTGATTCAGAGGATGAAT+CGG | 0.475091 | tig0018186:+66200 | Msa1364730:CDS |
| ATCCACTTGTACCATCTAAA+GGG | 0.476344 | tig0018186:+63586 | Msa1364730:CDS |
| AGAAAATTCGTCAAGATTGG+TGG | 0.491147 | tig0018186:-64297 | None:intergenic |
| CCTTCAAAATTTGAATGTGA+AGG | 0.493913 | tig0018186:-62387 | None:intergenic |
| TCTCTAAGAAACTGACTACT+TGG | 0.495153 | tig0018186:+63434 | Msa1364730:CDS |
| TTTGAAGCTACGTCAACGTT+GGG | 0.495384 | tig0018186:+62130 | Msa1364730:CDS |
| CTTTCTGGAACAGTATGGCC+AGG | 0.495454 | tig0018186:-66105 | None:intergenic |
| GAGTGTTTCCCATTGAAAGT+TGG | 0.495814 | tig0018186:-64273 | None:intergenic |
| TTCTATCTTGGTCAACAGCA+GGG | 0.496078 | tig0018186:-65849 | None:intergenic |
| TCTTTGCTTTAGGTTGCTGA+GGG | 0.496709 | tig0018186:+63558 | Msa1364730:intron |
| AAGGTATGTATACTTCTCTC+AGG | 0.497337 | tig0018186:+66400 | Msa1364730:three_prime_UTR |
| TGTTCTTGAGAAACTTCAAA+AGG | 0.498832 | tig0018186:+64485 | Msa1364730:CDS |
| TGGTTTGATCTAAGTTGTCT+CGG | 0.501559 | tig0018186:+66369 | Msa1364730:three_prime_UTR |
| TCAGAGGATGAATCGGATGA+AGG | 0.501955 | tig0018186:+66207 | Msa1364730:CDS |
| ACTGCACGATTCTGATAAAT+GGG | 0.502285 | tig0018186:+63402 | Msa1364730:CDS |
| CGCAGAGTCACAGATTGTAC+AGG | 0.502678 | tig0018186:+64192 | Msa1364730:CDS |
| GTAAGTTAAATACTGGGCCT+AGG | 0.507721 | tig0018186:-66253 | None:intergenic |
| TTCAAATCATTACCAAGTAA+TGG | 0.508223 | tig0018186:-62307 | None:intergenic |
| TGCATGGCTAGAGTGTTCTT+CGG | 0.509300 | tig0018186:-66034 | None:intergenic |
| ATAATAATCACTTGTTGCGC+GGG | 0.513845 | tig0018186:+61930 | Msa1364730:five_prime_UTR |
| TATGTAGAAGCTTAAGAAGA+GGG | 0.514421 | tig0018186:-66341 | None:intergenic |
| CAAAATGTAAGTTAAATACT+GGG | 0.529016 | tig0018186:-66259 | None:intergenic |
| CCATACTGTTCCAGAAAGCA+TGG | 0.529208 | tig0018186:+66110 | Msa1364730:CDS |
| AAGCGGATAGCTGGAGTCCC+TGG | 0.547182 | tig0018186:+66087 | Msa1364730:CDS |
| TACTATTGTTCCTGATTCAG+AGG | 0.548704 | tig0018186:+66191 | Msa1364730:CDS |
| AATAATAATCACTTGTTGCG+CGG | 0.549241 | tig0018186:+61929 | Msa1364730:five_prime_UTR |
| CAGAGGATGAATCGGATGAA+GGG | 0.550551 | tig0018186:+66208 | Msa1364730:CDS |
| AGACAGTGATGATTCTAAAA+GGG | 0.551033 | tig0018186:+65912 | Msa1364730:CDS |
| CAAACCATTGAAGAAGAAGA+AGG | 0.553723 | tig0018186:+62044 | Msa1364730:CDS |
| AGTCTCCACTCCAAACCGTA+AGG | 0.554203 | tig0018186:+64229 | Msa1364730:CDS |
| AGCAGCAGTAAACGATCCAA+TGG | 0.555310 | tig0018186:-63723 | None:intergenic |
| ACCGTGATACTATTCAGTTA+CGG | 0.555632 | tig0018186:+61996 | Msa1364730:five_prime_UTR |
| TTTGCCCTTACGGTTTGGAG+TGG | 0.558656 | tig0018186:-64234 | None:intergenic |
| ATTGAAGAAGAAGAAGGTGT+TGG | 0.559666 | tig0018186:+62050 | Msa1364730:CDS |
| CACGCTCTTGTCGCACTCGA+AGG | 0.565157 | tig0018186:+64696 | Msa1364730:CDS |
| ACTCCAAACCGTAAGGGCAA+AGG | 0.579452 | tig0018186:+64236 | Msa1364730:CDS |
| ATAACCAGCATCATCACTCT+CGG | 0.585101 | tig0018186:-65950 | None:intergenic |
| CTAAGAAACTGACTACTTGG+TGG | 0.585357 | tig0018186:+63437 | Msa1364730:CDS |
| CACCGTTCAAACATCTCTCA+TGG | 0.585929 | tig0018186:+66505 | Msa1364730:three_prime_UTR |
| TGCAGTTTCTTATCCAAAAG+GGG | 0.586748 | tig0018186:+66053 | Msa1364730:CDS |
| ATATGTAGAAGCTTAAGAAG+AGG | 0.587964 | tig0018186:-66342 | None:intergenic |
| TCTATCTTGGTCAACAGCAG+GGG | 0.588354 | tig0018186:-65848 | None:intergenic |
| TACCCTTTAGATGGTACAAG+TGG | 0.589127 | tig0018186:-63588 | None:intergenic |
| AGTTGTCTCGGAATCCATGA+AGG | 0.590238 | tig0018186:+66381 | Msa1364730:three_prime_UTR |
| AGAGGAGATATCAAAGTACA+AGG | 0.590906 | tig0018186:+63692 | Msa1364730:CDS |
| GTCTGCAGAAACATCTATGT+CGG | 0.600987 | tig0018186:-65893 | None:intergenic |
| ACTGACTACTTGGTGGCCAT+GGG | 0.604280 | tig0018186:+63444 | Msa1364730:CDS |
| TACCAGGGAATACCACCTGT+TGG | 0.604784 | tig0018186:+63373 | Msa1364730:intron |
| ATCAGCTCTAACTTCACAGA+GGG | 0.608902 | tig0018186:-63751 | None:intergenic |
| CATACTGTTCCAGAAAGCAT+GGG | 0.613802 | tig0018186:+66111 | Msa1364730:CDS |
| GTCTCCACTCCAAACCGTAA+GGG | 0.614231 | tig0018186:+64230 | Msa1364730:CDS |
| AGTCAGTTTCTTAGAGAGAG+CGG | 0.620141 | tig0018186:-63428 | None:intergenic |
| CCAAGATAGAAACAGAGGAT+CGG | 0.620891 | tig0018186:+65861 | Msa1364730:CDS |
| AGATCTTTCTTAGTCTACCT+AGG | 0.623850 | tig0018186:+66236 | Msa1364730:exon |
| TACGTCAAGGAAATGGAGAA+CGG | 0.627957 | tig0018186:-62162 | None:intergenic |
| TGAGAATCACAGCAGTAGTG+AGG | 0.635227 | tig0018186:+65978 | Msa1364730:CDS |
| GCGAGTTCCATCTATTCCAA+AGG | 0.636106 | tig0018186:-64053 | None:intergenic |
| ATATCCGAGAGTGATGATGC+TGG | 0.636194 | tig0018186:+65946 | Msa1364730:CDS |
| TTTCTGGAACAGTATGGCCA+GGG | 0.642106 | tig0018186:-66104 | None:intergenic |
| AAGGGGTTCGCTCTAGTAAG+CGG | 0.646238 | tig0018186:+66070 | Msa1364730:CDS |
| TCTATGGCAGTATTTCGGGT+AGG | 0.657275 | tig0018186:-66165 | None:intergenic |
| ACAGCCGAAGAAATCGAGAT+CGG | 0.657831 | tig0018186:+62334 | Msa1364730:CDS |
| TTATGTTCAGCAACATGATG+TGG | 0.660748 | tig0018186:+63970 | Msa1364730:intron |
| AATAGTATCACGGTAAACGA+AGG | 0.661354 | tig0018186:-61987 | None:intergenic |
| TGCAGTGCTTTACCAACAGG+TGG | 0.663046 | tig0018186:-63385 | None:intergenic |
| CACCATGAGAGATGTTTGAA+CGG | 0.672053 | tig0018186:-66507 | None:intergenic |
| GCAGAGTCACAGATTGTACA+GGG | 0.673231 | tig0018186:+64193 | Msa1364730:CDS |
| TTATGATCGAACAATTAAGG+AGG | 0.677041 | tig0018186:+65399 | Msa1364730:CDS |
| GTTGACCAAGATAGAAACAG+AGG | 0.683073 | tig0018186:+65856 | Msa1364730:CDS |
| TGATGAACATGTGAGTCAGG+CGG | 0.683825 | tig0018186:+66005 | Msa1364730:CDS |
| CTTTGCTTTAGGTTGCTGAG+GGG | 0.693013 | tig0018186:+63559 | Msa1364730:intron |
| ACCGTAACTGAATAGTATCA+CGG | 0.695651 | tig0018186:-61997 | None:intergenic |
| AATGTAGTCAGCAAAATTTG+GGG | 0.720479 | tig0018186:+66303 | Msa1364730:three_prime_UTR |
| CATCAGCTCTAACTTCACAG+AGG | 0.765715 | tig0018186:-63752 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGAAATAATTACCAAT+AGG | - | tig0018186:64083-64102 | None:intergenic | 15.0% |
| !!! | AGACAGATTAATAATTTTTA+GGG | - | tig0018186:64135-64154 | None:intergenic | 15.0% |
| !!! | AAGACAGATTAATAATTTTT+AGG | - | tig0018186:64136-64155 | None:intergenic | 15.0% |
| !! | TTAATTAAGGTTTCAAATAT+GGG | - | tig0018186:64371-64390 | None:intergenic | 15.0% |
| !! | TTCAATAGTAGTAAATATTA+GGG | + | tig0018186:64531-64550 | Msa1364730:intron | 15.0% |
| !! | TTCAAAATTTCGAAATGTAA+AGG | - | tig0018186:62116-62135 | None:intergenic | 20.0% |
| !! | TTAAATCTACAAAGAAACTA+AGG | - | tig0018186:63337-63356 | None:intergenic | 20.0% |
| !! | AAAATTTGAACAAACTAAAC+AGG | - | tig0018186:63789-63808 | None:intergenic | 20.0% |
| !! | GAAAGGAATTAGATAAAAAA+GGG | - | tig0018186:63895-63914 | None:intergenic | 20.0% |
| !! | TGAAAGGAATTAGATAAAAA+AGG | - | tig0018186:63896-63915 | None:intergenic | 20.0% |
| !! | TTGAAACATCAAAATTTGAA+AGG | - | tig0018186:63912-63931 | None:intergenic | 20.0% |
| !!! | ATTAATGATGCTTTAAAAGA+AGG | + | tig0018186:64001-64020 | Msa1364730:CDS | 20.0% |
| !! | GTTAATTAAGGTTTCAAATA+TGG | - | tig0018186:64372-64391 | None:intergenic | 20.0% |
| !! | GTTCAATAGTAGTAAATATT+AGG | + | tig0018186:64530-64549 | Msa1364730:intron | 20.0% |
| !! | TTACCAAAACTGTAATTAAT+AGG | - | tig0018186:64722-64741 | None:intergenic | 20.0% |
| !!! | TTAATTTTCTAAGTACTAAG+TGG | + | tig0018186:65063-65082 | Msa1364730:intron | 20.0% |
| !!! | ACATTAATCAAGTTCTTTTT+GGG | + | tig0018186:65361-65380 | Msa1364730:intron | 20.0% |
| !! | AGAATGGAAATTATAAATGA+TGG | - | tig0018186:65744-65763 | None:intergenic | 20.0% |
| !! | CAAAATGTAAGTTAAATACT+GGG | - | tig0018186:66262-66281 | None:intergenic | 20.0% |
| !!! | CAGTATTTAACTTACATTTT+GGG | + | tig0018186:66261-66280 | Msa1364730:three_prime_UTR | 20.0% |
| !!! | AGTATTTAACTTACATTTTG+GGG | + | tig0018186:66262-66281 | Msa1364730:three_prime_UTR | 20.0% |
| !!! | TTAAGCTTCTACATATTTTT+TGG | + | tig0018186:66349-66368 | Msa1364730:three_prime_UTR | 20.0% |
| !!! | CTCAGAATTTTTAAATTTCT+CGG | - | tig0018186:66435-66454 | None:intergenic | 20.0% |
| !! | AAAAATTCTGAGTACATATA+TGG | + | tig0018186:66443-66462 | Msa1364730:three_prime_UTR | 20.0% |
| ! | AAAACGTTACTAACATGATT+TGG | - | tig0018186:62258-62277 | None:intergenic | 25.0% |
| !! | AATCATGTTAGTAACGTTTT+CGG | + | tig0018186:62258-62277 | Msa1364730:intron | 25.0% |
| ! | TTCAAATCATTACCAAGTAA+TGG | - | tig0018186:62310-62329 | None:intergenic | 25.0% |
| !!! | ATTACTTGGTAATGATTTGA+AGG | + | tig0018186:62309-62328 | Msa1364730:CDS | 25.0% |
| ! | CATATCTTTCTTAATGGTTT+CGG | - | tig0018186:62691-62710 | None:intergenic | 25.0% |
| ! | GAAATGAATCAACATAGTAA+TGG | - | tig0018186:62943-62962 | None:intergenic | 25.0% |
| ! | AATGAGATAATATGCACTAT+GGG | - | tig0018186:63117-63136 | None:intergenic | 25.0% |
| ! | TAATGAGATAATATGCACTA+TGG | - | tig0018186:63118-63137 | None:intergenic | 25.0% |
| !!! | ACTTTCTATTTTTCTGTTGA+TGG | + | tig0018186:63281-63300 | Msa1364730:intron | 25.0% |
| !!! | TTTAATTTTTACTCCTACCA+GGG | + | tig0018186:63358-63377 | Msa1364730:intron | 25.0% |
| !!! | GATTTATTGCTTTGTTTTGT+TGG | + | tig0018186:63526-63545 | Msa1364730:intron | 25.0% |
| ! | ACTACCAATATCAATTGTTA+TGG | + | tig0018186:63634-63653 | Msa1364730:intron | 25.0% |
| ! | AATGCCATAACAATTGATAT+TGG | - | tig0018186:63641-63660 | None:intergenic | 25.0% |
| ! | TCAGAGATAATTATATAGTC+AGG | - | tig0018186:63854-63873 | None:intergenic | 25.0% |
| ! | TAATTATCTCTGAGCATTAT+TGG | + | tig0018186:63861-63880 | Msa1364730:intron | 25.0% |
| !!! | ATGATACCAGATTATTTTGA+TGG | + | tig0018186:63938-63957 | Msa1364730:intron | 25.0% |
| ! | AACAAACCATCAAAATAATC+TGG | - | tig0018186:63947-63966 | None:intergenic | 25.0% |
| ! | TTTGCGAAAAGAAGAAATTT+GGG | - | tig0018186:64029-64048 | None:intergenic | 25.0% |
| ! | TTTCAAATATGGGTAAATGA+TGG | - | tig0018186:64361-64380 | None:intergenic | 25.0% |
| ! | CATTCAAAGACAGTTAATTA+AGG | - | tig0018186:64384-64403 | None:intergenic | 25.0% |
| ! | TGTATTACTTGCACTATTAA+AGG | + | tig0018186:64802-64821 | Msa1364730:intron | 25.0% |
| ! | GTATTACTTGCACTATTAAA+GGG | + | tig0018186:64803-64822 | Msa1364730:intron | 25.0% |
| ! | TATTACTTGCACTATTAAAG+GGG | + | tig0018186:64804-64823 | Msa1364730:intron | 25.0% |
| ! | TGCAATTCTTAACATTGAAA+TGG | - | tig0018186:65139-65158 | None:intergenic | 25.0% |
| !! | GACATTAATCAAGTTCTTTT+TGG | + | tig0018186:65360-65379 | Msa1364730:intron | 25.0% |
| ! | TATCTGATATTATATCCCAT+TGG | + | tig0018186:65446-65465 | Msa1364730:intron | 25.0% |
| ! | AAAACTATCAACATTCTACA+AGG | - | tig0018186:65506-65525 | None:intergenic | 25.0% |
| !!! | AGTTTTTTGTTATCATCAAG+TGG | + | tig0018186:65520-65539 | Msa1364730:intron | 25.0% |
| !! | GAAAAGAAGCAAAGTATTAA+AGG | - | tig0018186:65592-65611 | None:intergenic | 25.0% |
| ! | TTATCAACGTTATTATTCTC+AGG | - | tig0018186:65670-65689 | None:intergenic | 25.0% |
| ! | ATGCAGCAAATATATTGTTA+GGG | - | tig0018186:65709-65728 | None:intergenic | 25.0% |
| ! | TATGCAGCAAATATATTGTT+AGG | - | tig0018186:65710-65729 | None:intergenic | 25.0% |
| ! | CCAAAATGTAAGTTAAATAC+TGG | - | tig0018186:66263-66282 | None:intergenic | 25.0% |
| !!! | CCAGTATTTAACTTACATTT+TGG | + | tig0018186:66260-66279 | Msa1364730:three_prime_UTR | 25.0% |
| ! | AATAATAATCACTTGTTGCG+CGG | + | tig0018186:61929-61948 | Msa1364730:five_prime_UTR | 30.0% |
| AATATCTTACGTCAAGGAAA+TGG | - | tig0018186:62172-62191 | None:intergenic | 30.0% | |
| !! | ATTCATCCGTTTTATTCATC+TGG | + | tig0018186:62198-62217 | Msa1364730:intron | 30.0% |
| TTCGAACCAGATGAATAAAA+CGG | - | tig0018186:62207-62226 | None:intergenic | 30.0% | |
| ATCGTAATTCGTAACCTAAT+AGG | - | tig0018186:62234-62253 | None:intergenic | 30.0% | |
| CCTTCAAAATTTGAATGTGA+AGG | - | tig0018186:62390-62409 | None:intergenic | 30.0% | |
| ! | CCTTCACATTCAAATTTTGA+AGG | + | tig0018186:62387-62406 | Msa1364730:CDS | 30.0% |
| !! | AAAGCACAAGTATTGAAAAC+AGG | - | tig0018186:62425-62444 | None:intergenic | 30.0% |
| ! | TTTAAAACGCAATCCACAAA+AGG | - | tig0018186:62494-62513 | None:intergenic | 30.0% |
| TAGAAAAGATGCTAGAAACT+AGG | + | tig0018186:62581-62600 | Msa1364730:intron | 30.0% | |
| AAATCAACCAAAGCAAAGAA+AGG | + | tig0018186:62650-62669 | Msa1364730:intron | 30.0% | |
| ! | TTTTAAGCCTTTCTTTGCTT+TGG | - | tig0018186:62660-62679 | None:intergenic | 30.0% |
| CGAAACCATTAAGAAAGATA+TGG | + | tig0018186:62689-62708 | Msa1364730:intron | 30.0% | |
| ACTCTCCATATCTTTCTTAA+TGG | - | tig0018186:62697-62716 | None:intergenic | 30.0% | |
| ATTGCTTTGTCTGTAGTAAA+TGG | + | tig0018186:62892-62911 | Msa1364730:intron | 30.0% | |
| !!! | CTTTGTTTTCTCGTCTTATT+TGG | + | tig0018186:63014-63033 | Msa1364730:intron | 30.0% |
| ATGAGATAATATGCACTATG+GGG | - | tig0018186:63116-63135 | None:intergenic | 30.0% | |
| TGCATATTATCTCATTATCG+TGG | + | tig0018186:63121-63140 | Msa1364730:intron | 30.0% | |
| TATTATCTCATTATCGTGGA+AGG | + | tig0018186:63125-63144 | Msa1364730:intron | 30.0% | |
| TCCTATCCATTATTAGATAC+CGG | + | tig0018186:63306-63325 | Msa1364730:intron | 30.0% | |
| ATCTACAAAGAAACTAAGGA+TGG | - | tig0018186:63333-63352 | None:intergenic | 30.0% | |
| !! | GTTTAATTTTTACTCCTACC+AGG | + | tig0018186:63357-63376 | Msa1364730:intron | 30.0% |
| AAGTTAGAGCTGATGTAATA+TGG | + | tig0018186:63760-63779 | Msa1364730:intron | 30.0% | |
| GGAATTAGATAAAAAAGGGA+AGG | - | tig0018186:63891-63910 | None:intergenic | 30.0% | |
| CTTTGCGAAAAGAAGAAATT+TGG | - | tig0018186:64030-64049 | None:intergenic | 30.0% | |
| ! | AATTTCTTCTTTTCGCAAAG+AGG | + | tig0018186:64030-64049 | Msa1364730:CDS | 30.0% |
| TGACAAAATCATGAAGAGAT+TGG | - | tig0018186:64109-64128 | None:intergenic | 30.0% | |
| TGTCTTACTTTGTCTATTGT+AGG | + | tig0018186:64150-64169 | Msa1364730:intron | 30.0% | |
| TTCAGAAAATTCGTCAAGAT+TGG | - | tig0018186:64303-64322 | None:intergenic | 30.0% | |
| ! | TGTCTTTGAATGTTATTTGC+AGG | + | tig0018186:64392-64411 | Msa1364730:intron | 30.0% |
| ! | TCTCGTGTTGAGATTTTTAT+GGG | + | tig0018186:64435-64454 | Msa1364730:CDS | 30.0% |
| !!! | TTTTGAAGTTTCTCAAGAAC+AGG | - | tig0018186:64486-64505 | None:intergenic | 30.0% |
| TGTTCTTGAGAAACTTCAAA+AGG | + | tig0018186:64485-64504 | Msa1364730:CDS | 30.0% | |
| ACTATTGAACACAAGACAAA+AGG | - | tig0018186:64520-64539 | None:intergenic | 30.0% | |
| AATGAAACAAAAAGAGAGAC+AGG | + | tig0018186:64628-64647 | Msa1364730:CDS | 30.0% | |
| ! | TTTCAGAACTCTTTTTCTTC+TGG | + | tig0018186:64668-64687 | Msa1364730:CDS | 30.0% |
| ! | AGGCCTATTAATTACAGTTT+TGG | + | tig0018186:64716-64735 | Msa1364730:CDS | 30.0% |
| ATAGTGCAAGTAATACACAA+AGG | - | tig0018186:64799-64818 | None:intergenic | 30.0% | |
| ATTACTTGCACTATTAAAGG+GGG | + | tig0018186:64805-64824 | Msa1364730:intron | 30.0% | |
| TACTGAGAAAATCAAAAGAG+AGG | - | tig0018186:64932-64951 | None:intergenic | 30.0% | |
| CTAAGACTAAAAACTGATAC+AGG | - | tig0018186:65021-65040 | None:intergenic | 30.0% | |
| ATGATGACTAATGGAACAAT+AGG | - | tig0018186:65177-65196 | None:intergenic | 30.0% | |
| !! | TTAGTTAAAACTGACTTGAC+AGG | + | tig0018186:65223-65242 | Msa1364730:intron | 30.0% |
| AGCTTATGATCGAACAATTA+AGG | + | tig0018186:65396-65415 | Msa1364730:CDS | 30.0% | |
| TTATGATCGAACAATTAAGG+AGG | + | tig0018186:65399-65418 | Msa1364730:CDS | 30.0% | |
| !!! | ACGTTGATAACTTTTAGCAA+TGG | + | tig0018186:65680-65699 | Msa1364730:intron | 30.0% |
| ! | AGACAGTGATGATTCTAAAA+GGG | + | tig0018186:65912-65931 | Msa1364730:CDS | 30.0% |
| ATGCAGTTTCTTATCCAAAA+GGG | + | tig0018186:66052-66071 | Msa1364730:CDS | 30.0% | |
| TAGATTCTATGGCAGTATTT+CGG | - | tig0018186:66173-66192 | None:intergenic | 30.0% | |
| AGGAACAATAGTAGATTCTA+TGG | - | tig0018186:66184-66203 | None:intergenic | 30.0% | |
| AGAATGTAGTCAGCAAAATT+TGG | + | tig0018186:66301-66320 | Msa1364730:three_prime_UTR | 30.0% | |
| GAATGTAGTCAGCAAAATTT+GGG | + | tig0018186:66302-66321 | Msa1364730:three_prime_UTR | 30.0% | |
| AATGTAGTCAGCAAAATTTG+GGG | + | tig0018186:66303-66322 | Msa1364730:three_prime_UTR | 30.0% | |
| TATGTAGAAGCTTAAGAAGA+GGG | - | tig0018186:66344-66363 | None:intergenic | 30.0% | |
| ATATGTAGAAGCTTAAGAAG+AGG | - | tig0018186:66345-66364 | None:intergenic | 30.0% | |
| GCTTGACAAAATTAGAAATC+AGG | + | tig0018186:66556-66575 | Msa1364730:three_prime_UTR | 30.0% | |
| ! | ATAATAATCACTTGTTGCGC+GGG | + | tig0018186:61930-61949 | Msa1364730:five_prime_UTR | 35.0% |
| AATAGTATCACGGTAAACGA+AGG | - | tig0018186:61990-62009 | None:intergenic | 35.0% | |
| ACCGTGATACTATTCAGTTA+CGG | + | tig0018186:61996-62015 | Msa1364730:five_prime_UTR | 35.0% | |
| ACCGTAACTGAATAGTATCA+CGG | - | tig0018186:62000-62019 | None:intergenic | 35.0% | |
| CAAACCATTGAAGAAGAAGA+AGG | + | tig0018186:62044-62063 | Msa1364730:CDS | 35.0% | |
| AACACCTTCTTCTTCTTCAA+TGG | - | tig0018186:62051-62070 | None:intergenic | 35.0% | |
| ! | ATTGAAGAAGAAGAAGGTGT+TGG | + | tig0018186:62050-62069 | Msa1364730:CDS | 35.0% |
| ! | ATTCAAATGCTTGCCTTTTG+TGG | + | tig0018186:62478-62497 | Msa1364730:intron | 35.0% |
| GGCTTGTAGATTCTATAGTA+AGG | + | tig0018186:62602-62621 | Msa1364730:intron | 35.0% | |
| AGATTCTATAGTAAGGAGAG+TGG | + | tig0018186:62609-62628 | Msa1364730:intron | 35.0% | |
| ! | AAAGTGAACAGTGTTACTAG+CGG | - | tig0018186:62998-63017 | None:intergenic | 35.0% |
| AAGAAAGCCCAAAACATGTA+AGG | + | tig0018186:63176-63195 | Msa1364730:intron | 35.0% | |
| ! | GCATTTGCCTTACATGTTTT+GGG | - | tig0018186:63186-63205 | None:intergenic | 35.0% |
| ! | TGCATTTGCCTTACATGTTT+TGG | - | tig0018186:63187-63206 | None:intergenic | 35.0% |
| AAGGCAAATGCAATTTAGCT+TGG | + | tig0018186:63195-63214 | Msa1364730:intron | 35.0% | |
| !! | ACCGGTATCTAATAATGGAT+AGG | - | tig0018186:63310-63329 | None:intergenic | 35.0% |
| ACTGCACGATTCTGATAAAT+GGG | + | tig0018186:63402-63421 | Msa1364730:CDS | 35.0% | |
| ! | TCTCTAAGAAACTGACTACT+TGG | + | tig0018186:63434-63453 | Msa1364730:CDS | 35.0% |
| CAATAAATCGTATCAGCAAC+GGG | - | tig0018186:63515-63534 | None:intergenic | 35.0% | |
| GCAATAAATCGTATCAGCAA+CGG | - | tig0018186:63516-63535 | None:intergenic | 35.0% | |
| !!! | TATTGCTTTGTTTTGTTGGC+TGG | + | tig0018186:63530-63549 | Msa1364730:intron | 35.0% |
| AATCCACTTGTACCATCTAA+AGG | + | tig0018186:63585-63604 | Msa1364730:CDS | 35.0% | |
| ATCCACTTGTACCATCTAAA+GGG | + | tig0018186:63586-63605 | Msa1364730:CDS | 35.0% | |
| AGAACATGATCAGTTCAACT+CGG | - | tig0018186:63614-63633 | None:intergenic | 35.0% | |
| AGAGGAGATATCAAAGTACA+AGG | + | tig0018186:63692-63711 | Msa1364730:CDS | 35.0% | |
| TTATGTTCAGCAACATGATG+TGG | + | tig0018186:63970-63989 | Msa1364730:intron | 35.0% | |
| TATCACTTCCCAACTTTCAA+TGG | + | tig0018186:64264-64283 | Msa1364730:CDS | 35.0% | |
| ATCACTTCCCAACTTTCAAT+GGG | + | tig0018186:64265-64284 | Msa1364730:CDS | 35.0% | |
| AGTGTTTCCCATTGAAAGTT+GGG | - | tig0018186:64275-64294 | None:intergenic | 35.0% | |
| AGAAAATTCGTCAAGATTGG+TGG | - | tig0018186:64300-64319 | None:intergenic | 35.0% | |
| ! | GTCTCGTGTTGAGATTTTTA+TGG | + | tig0018186:64434-64453 | Msa1364730:CDS | 35.0% |
| TCTCCATGCTTGCATATTTA+TGG | + | tig0018186:64744-64763 | Msa1364730:intron | 35.0% | |
| ACTCCATAAATATGCAAGCA+TGG | - | tig0018186:64750-64769 | None:intergenic | 35.0% | |
| TGCTTGCATATTTATGGAGT+TGG | + | tig0018186:64750-64769 | Msa1364730:intron | 35.0% | |
| TTTGGCATTATGATGCATAG+AGG | + | tig0018186:64884-64903 | Msa1364730:intron | 35.0% | |
| TTGGCATTATGATGCATAGA+GGG | + | tig0018186:64885-64904 | Msa1364730:intron | 35.0% | |
| ACAAGAAATCAGTGAAAGTG+AGG | - | tig0018186:64991-65010 | None:intergenic | 35.0% | |
| ! | TAGTCTTAGAGAGTAATGTG+TGG | + | tig0018186:65032-65051 | Msa1364730:intron | 35.0% |
| ACGTGTGATATGATGACTAA+TGG | - | tig0018186:65186-65205 | None:intergenic | 35.0% | |
| !! | TTAAAACTGACTTGACAGGT+CGG | + | tig0018186:65227-65246 | Msa1364730:intron | 35.0% |
| !! | GAGAAGCATCAAACAAAATG+TGG | - | tig0018186:65263-65282 | None:intergenic | 35.0% |
| ATCCAACTGATGTCATAAAG+AGG | - | tig0018186:65337-65356 | None:intergenic | 35.0% | |
| CAGATAGAACATGAACCAAT+GGG | - | tig0018186:65464-65483 | None:intergenic | 35.0% | |
| GTTTAATCCTCTCAAAGAGA+AGG | + | tig0018186:65547-65566 | Msa1364730:intron | 35.0% | |
| CTCAGATTGTGTGTTTCAAT+GGG | - | tig0018186:65632-65651 | None:intergenic | 35.0% | |
| TCTCAGATTGTGTGTTTCAA+TGG | - | tig0018186:65633-65652 | None:intergenic | 35.0% | |
| CCAAAACACATATCAGAGAA+TGG | - | tig0018186:65760-65779 | None:intergenic | 35.0% | |
| ! | CCATTCTCTGATATGTGTTT+TGG | + | tig0018186:65757-65776 | Msa1364730:intron | 35.0% |
| TTGAACTGATGCTTAGCAAA+AGG | + | tig0018186:65818-65837 | Msa1364730:intron | 35.0% | |
| CAGACAGTGATGATTCTAAA+AGG | + | tig0018186:65911-65930 | Msa1364730:CDS | 35.0% | |
| ! | CTTTTGGATAAGAAACTGCA+TGG | - | tig0018186:66053-66072 | None:intergenic | 35.0% |
| CATGCAGTTTCTTATCCAAA+AGG | + | tig0018186:66051-66070 | Msa1364730:CDS | 35.0% | |
| TGCAGTTTCTTATCCAAAAG+GGG | + | tig0018186:66053-66072 | Msa1364730:CDS | 35.0% | |
| AGATTCTATGGCAGTATTTC+GGG | - | tig0018186:66172-66191 | None:intergenic | 35.0% | |
| TACTATTGTTCCTGATTCAG+AGG | + | tig0018186:66191-66210 | Msa1364730:CDS | 35.0% | |
| AGATCTTTCTTAGTCTACCT+AGG | + | tig0018186:66236-66255 | Msa1364730:exon | 35.0% | |
| TGGTTTGATCTAAGTTGTCT+CGG | + | tig0018186:66369-66388 | Msa1364730:three_prime_UTR | 35.0% | |
| ! | GAGAAGTATACATACCTTCA+TGG | - | tig0018186:66398-66417 | None:intergenic | 35.0% |
| AAGGTATGTATACTTCTCTC+AGG | + | tig0018186:66400-66419 | Msa1364730:three_prime_UTR | 35.0% | |
| ! | ATTTTGTCAAGCATCTCACA+TGG | - | tig0018186:66548-66567 | None:intergenic | 35.0% |
| TCTCTCTCAACAACAACAAC+TGG | + | tig0018186:61898-61917 | Msa1364730:five_prime_UTR | 40.0% | |
| !!! | TTTTGAAGCTACGTCAACGT+TGG | + | tig0018186:62129-62148 | Msa1364730:CDS | 40.0% |
| ! | TTTGAAGCTACGTCAACGTT+GGG | + | tig0018186:62130-62149 | Msa1364730:CDS | 40.0% |
| TACGTCAAGGAAATGGAGAA+CGG | - | tig0018186:62165-62184 | None:intergenic | 40.0% | |
| ! | CTGGTTCGAATGTTCCTATT+AGG | + | tig0018186:62217-62236 | Msa1364730:intron | 40.0% |
| CAGGTGTTTAGTCCATTACT+TGG | + | tig0018186:62295-62314 | Msa1364730:intron | 40.0% | |
| AAGTCCGATCTCGATTTCTT+CGG | - | tig0018186:62341-62360 | None:intergenic | 40.0% | |
| !! | AGGTTAGCAAGAGAAGCATT+AGG | - | tig0018186:62370-62389 | None:intergenic | 40.0% |
| CTATAGTAAGGAGAGTGGAT+TGG | + | tig0018186:62614-62633 | Msa1364730:intron | 40.0% | |
| TAAGTCTAATCCCACTGAGT+GGG | - | tig0018186:62786-62805 | None:intergenic | 40.0% | |
| TTTGTCTGTAGTAAATGGCC+TGG | + | tig0018186:62897-62916 | Msa1364730:intron | 40.0% | |
| TTGTCTGTAGTAAATGGCCT+GGG | + | tig0018186:62898-62917 | Msa1364730:intron | 40.0% | |
| TGGAAGAAACACAGATCAGT+TGG | + | tig0018186:63034-63053 | Msa1364730:intron | 40.0% | |
| GATGGACCGGTATCTAATAA+TGG | - | tig0018186:63315-63334 | None:intergenic | 40.0% | |
| CAAAGAAACTAAGGATGGAC+CGG | - | tig0018186:63328-63347 | None:intergenic | 40.0% | |
| CACTGCACGATTCTGATAAA+TGG | + | tig0018186:63401-63420 | Msa1364730:CDS | 40.0% | |
| AGTCAGTTTCTTAGAGAGAG+CGG | - | tig0018186:63431-63450 | None:intergenic | 40.0% | |
| CTAAGAAACTGACTACTTGG+TGG | + | tig0018186:63437-63456 | Msa1364730:CDS | 40.0% | |
| ! | ATCTATTGATGACTCACCCA+TGG | - | tig0018186:63463-63482 | None:intergenic | 40.0% |
| !! | TCTTTGCTTTAGGTTGCTGA+GGG | + | tig0018186:63558-63577 | Msa1364730:intron | 40.0% |
| TACCCTTTAGATGGTACAAG+TGG | - | tig0018186:63591-63610 | None:intergenic | 40.0% | |
| GCATTATTGCTTATGCAGAG+AGG | + | tig0018186:63674-63693 | Msa1364730:intron | 40.0% | |
| ! | ATCAGCTCTAACTTCACAGA+GGG | - | tig0018186:63754-63773 | None:intergenic | 40.0% |
| !! | AAAGAGGCCTTTGGAATAGA+TGG | + | tig0018186:64046-64065 | Msa1364730:CDS | 40.0% |
| GAGTGTTTCCCATTGAAAGT+TGG | - | tig0018186:64276-64295 | None:intergenic | 40.0% | |
| ! | GGGTAAATGATGGAAGAGAA+AGG | - | tig0018186:64351-64370 | None:intergenic | 40.0% |
| ! | TTGAGATTTTTATGGGCGAC+AGG | + | tig0018186:64442-64461 | Msa1364730:CDS | 40.0% |
| TCATACCAATTGAGCAGATG+AGG | + | tig0018186:64832-64851 | Msa1364730:intron | 40.0% | |
| GCATCATAATGCCAAACGAA+GGG | - | tig0018186:64880-64899 | None:intergenic | 40.0% | |
| TGCATCATAATGCCAAACGA+AGG | - | tig0018186:64881-64900 | None:intergenic | 40.0% | |
| !! | TAAAACTGACTTGACAGGTC+GGG | + | tig0018186:65228-65247 | Msa1364730:intron | 40.0% |
| TGCCTCTTTATGACATCAGT+TGG | + | tig0018186:65332-65351 | Msa1364730:intron | 40.0% | |
| GCAGATAGAACATGAACCAA+TGG | - | tig0018186:65465-65484 | None:intergenic | 40.0% | |
| AAGGATGATGCAATGTAGCA+AGG | - | tig0018186:65487-65506 | None:intergenic | 40.0% | |
| TTCTATCTTGGTCAACAGCA+GGG | - | tig0018186:65852-65871 | None:intergenic | 40.0% | |
| TTTCTATCTTGGTCAACAGC+AGG | - | tig0018186:65853-65872 | None:intergenic | 40.0% | |
| GTTGACCAAGATAGAAACAG+AGG | + | tig0018186:65856-65875 | Msa1364730:CDS | 40.0% | |
| CCAAGATAGAAACAGAGGAT+CGG | + | tig0018186:65861-65880 | Msa1364730:CDS | 40.0% | |
| GTCTGCAGAAACATCTATGT+CGG | - | tig0018186:65896-65915 | None:intergenic | 40.0% | |
| ATAACCAGCATCATCACTCT+CGG | - | tig0018186:65953-65972 | None:intergenic | 40.0% | |
| GAATGATGAACATGTGAGTC+AGG | + | tig0018186:66002-66021 | Msa1364730:CDS | 40.0% | |
| ! | CATACTGTTCCAGAAAGCAT+GGG | + | tig0018186:66111-66130 | Msa1364730:CDS | 40.0% |
| TCCTGATTCAGAGGATGAAT+CGG | + | tig0018186:66200-66219 | Msa1364730:CDS | 40.0% | |
| GTAAGTTAAATACTGGGCCT+AGG | - | tig0018186:66256-66275 | None:intergenic | 40.0% | |
| CACCATGAGAGATGTTTGAA+CGG | - | tig0018186:66510-66529 | None:intergenic | 40.0% | |
| TTCAGTTACGGTTGCGAAAG+AGG | + | tig0018186:62008-62027 | Msa1364730:five_prime_UTR | 45.0% | |
| GACGCGAATATCTTACGTCA+AGG | - | tig0018186:62178-62197 | None:intergenic | 45.0% | |
| TTCGGTGATTCGTGTGATTC+AGG | + | tig0018186:62276-62295 | Msa1364730:intron | 45.0% | |
| ACAGCCGAAGAAATCGAGAT+CGG | + | tig0018186:62334-62353 | Msa1364730:CDS | 45.0% | |
| !! | AGTAAGGAGAGTGGATTGGA+TGG | + | tig0018186:62618-62637 | Msa1364730:intron | 45.0% |
| ATGTAGCTAAACCCACTCAG+TGG | + | tig0018186:62772-62791 | Msa1364730:intron | 45.0% | |
| TGTAGCTAAACCCACTCAGT+GGG | + | tig0018186:62773-62792 | Msa1364730:intron | 45.0% | |
| CTAAGTCTAATCCCACTGAG+TGG | - | tig0018186:62787-62806 | None:intergenic | 45.0% | |
| !! | CTCTTTGCTTTAGGTTGCTG+AGG | + | tig0018186:63557-63576 | Msa1364730:intron | 45.0% |
| !! | CTTTGCTTTAGGTTGCTGAG+GGG | + | tig0018186:63559-63578 | Msa1364730:intron | 45.0% |
| TCAACTCGGTACCCTTTAGA+TGG | - | tig0018186:63600-63619 | None:intergenic | 45.0% | |
| GTACAAGGAGCTTGATCCAT+TGG | + | tig0018186:63707-63726 | Msa1364730:CDS | 45.0% | |
| AGCAGCAGTAAACGATCCAA+TGG | - | tig0018186:63726-63745 | None:intergenic | 45.0% | |
| ! | CATCAGCTCTAACTTCACAG+AGG | - | tig0018186:63755-63774 | None:intergenic | 45.0% |
| ! | TCTTTTCGCAAAGAGGCCTT+TGG | + | tig0018186:64037-64056 | Msa1364730:CDS | 45.0% |
| GCGAGTTCCATCTATTCCAA+AGG | - | tig0018186:64056-64075 | None:intergenic | 45.0% | |
| ATGGAACTCGCACATCCTAT+TGG | + | tig0018186:64065-64084 | Msa1364730:CDS | 45.0% | |
| GCAGAGTCACAGATTGTACA+GGG | + | tig0018186:64193-64212 | Msa1364730:CDS | 45.0% | |
| ATAAGCAGCCTTTGCCCTTA+CGG | - | tig0018186:64247-64266 | None:intergenic | 45.0% | |
| CTTGCACTATTAAAGGGGGT+TGG | + | tig0018186:64809-64828 | Msa1364730:intron | 45.0% | |
| GACATCCTCATCTGCTCAAT+TGG | - | tig0018186:64840-64859 | None:intergenic | 45.0% | |
| AGGATGTCTGTGTATGTGTG+AGG | + | tig0018186:64852-64871 | Msa1364730:intron | 45.0% | |
| CAATGGGTGTATCTCAGCAA+TGG | - | tig0018186:65616-65635 | None:intergenic | 45.0% | |
| TCTATCTTGGTCAACAGCAG+GGG | - | tig0018186:65851-65870 | None:intergenic | 45.0% | |
| !! | CCGATCCTCTGTTTCTATCT+TGG | - | tig0018186:65864-65883 | None:intergenic | 45.0% |
| GCATCATCACTCTCGGATAT+AGG | - | tig0018186:65946-65965 | None:intergenic | 45.0% | |
| ! | ATATCCGAGAGTGATGATGC+TGG | + | tig0018186:65946-65965 | Msa1364730:CDS | 45.0% |
| TGAGAATCACAGCAGTAGTG+AGG | + | tig0018186:65978-65997 | Msa1364730:CDS | 45.0% | |
| TGATGAACATGTGAGTCAGG+CGG | + | tig0018186:66005-66024 | Msa1364730:CDS | 45.0% | |
| ! | TGCATGGCTAGAGTGTTCTT+CGG | - | tig0018186:66037-66056 | None:intergenic | 45.0% |
| ! | TTACTAGAGCGAACCCCTTT+TGG | - | tig0018186:66069-66088 | None:intergenic | 45.0% |
| !! | TTTCTGGAACAGTATGGCCA+GGG | - | tig0018186:66107-66126 | None:intergenic | 45.0% |
| !! | CCATGCTTTCTGGAACAGTA+TGG | - | tig0018186:66113-66132 | None:intergenic | 45.0% |
| CCATACTGTTCCAGAAAGCA+TGG | + | tig0018186:66110-66129 | Msa1364730:CDS | 45.0% | |
| ! | TCTATGGCAGTATTTCGGGT+AGG | - | tig0018186:66168-66187 | None:intergenic | 45.0% |
| TCCGATTCATCCTCTGAATC+AGG | - | tig0018186:66204-66223 | None:intergenic | 45.0% | |
| TCAGAGGATGAATCGGATGA+AGG | + | tig0018186:66207-66226 | Msa1364730:CDS | 45.0% | |
| CAGAGGATGAATCGGATGAA+GGG | + | tig0018186:66208-66227 | Msa1364730:CDS | 45.0% | |
| AGTTGTCTCGGAATCCATGA+AGG | + | tig0018186:66381-66400 | Msa1364730:three_prime_UTR | 45.0% | |
| CACCGTTCAAACATCTCTCA+TGG | + | tig0018186:66505-66524 | Msa1364730:three_prime_UTR | 45.0% | |
| !! | TATATATTAATTCTTTAAAT+TGG | + | tig0018186:63226-63245 | Msa1364730:intron | 5.0% |
| !! | TAATATTAAAAACAAATAAA+GGG | - | tig0018186:64561-64580 | None:intergenic | 5.0% |
| !! | TTAATATTAAAAACAAATAA+AGG | - | tig0018186:64562-64581 | None:intergenic | 5.0% |
| !! | AAGGAGAGTGGATTGGATGG+AGG | + | tig0018186:62621-62640 | Msa1364730:intron | 50.0% |
| !! | AGGAGAGTGGATTGGATGGA+GGG | + | tig0018186:62622-62641 | Msa1364730:intron | 50.0% |
| AATGGCCTGGGAAAAAGCAG+TGG | + | tig0018186:62910-62929 | Msa1364730:intron | 50.0% | |
| AACAGGTGGTATTCCCTGGT+AGG | - | tig0018186:63374-63393 | None:intergenic | 50.0% | |
| TACCAGGGAATACCACCTGT+TGG | + | tig0018186:63373-63392 | Msa1364730:intron | 50.0% | |
| TACCAACAGGTGGTATTCCC+TGG | - | tig0018186:63378-63397 | None:intergenic | 50.0% | |
| TGCAGTGCTTTACCAACAGG+TGG | - | tig0018186:63388-63407 | None:intergenic | 50.0% | |
| TCGTGCAGTGCTTTACCAAC+AGG | - | tig0018186:63391-63410 | None:intergenic | 50.0% | |
| ! | AACTGACTACTTGGTGGCCA+TGG | + | tig0018186:63443-63462 | Msa1364730:CDS | 50.0% |
| ! | ACTGACTACTTGGTGGCCAT+GGG | + | tig0018186:63444-63463 | Msa1364730:CDS | 50.0% |
| !!! | GCTTTGTTTTGTTGGCTGGC+TGG | + | tig0018186:63534-63553 | Msa1364730:intron | 50.0% |
| CGCAGAGTCACAGATTGTAC+AGG | + | tig0018186:64192-64211 | Msa1364730:CDS | 50.0% | |
| AGTCTCCACTCCAAACCGTA+AGG | + | tig0018186:64229-64248 | Msa1364730:CDS | 50.0% | |
| GTCTCCACTCCAAACCGTAA+GGG | + | tig0018186:64230-64249 | Msa1364730:CDS | 50.0% | |
| ! | TTTGCCCTTACGGTTTGGAG+TGG | - | tig0018186:64237-64256 | None:intergenic | 50.0% |
| ACTCCAAACCGTAAGGGCAA+AGG | + | tig0018186:64236-64255 | Msa1364730:CDS | 50.0% | |
| GCTTGCTCCTTCTCTTTGAG+AGG | - | tig0018186:65557-65576 | None:intergenic | 50.0% | |
| AAGGGGTTCGCTCTAGTAAG+CGG | + | tig0018186:66070-66089 | Msa1364730:CDS | 50.0% | |
| !! | CTTTCTGGAACAGTATGGCC+AGG | - | tig0018186:66108-66127 | None:intergenic | 50.0% |
| GCAGTCAAACCCATGCTTTC+TGG | - | tig0018186:66123-66142 | None:intergenic | 50.0% | |
| AGACCAAAACGCACGCGTTC+AGG | + | tig0018186:62079-62098 | Msa1364730:CDS | 55.0% | |
| ! | CATCCTGAACGCGTGCGTTT+TGG | - | tig0018186:62085-62104 | None:intergenic | 55.0% |
| AAACGCACGCGTTCAGGATG+AGG | + | tig0018186:62085-62104 | Msa1364730:CDS | 55.0% | |
| GCCTGGGAAAAAGCAGTGGA+GGG | + | tig0018186:62914-62933 | Msa1364730:intron | 55.0% | |
| !!! | ACCCTCCACTGCTTTTTCCC+AGG | - | tig0018186:62918-62937 | None:intergenic | 55.0% |
| ! | GCTGGCTGGCTCTTTGCTTT+AGG | + | tig0018186:63548-63567 | Msa1364730:intron | 55.0% |
| CAGCCTTTGCCCTTACGGTT+TGG | - | tig0018186:64242-64261 | None:intergenic | 55.0% | |
| ! | TGTGTGAGGTGCCCTTCGTT+TGG | + | tig0018186:64866-64885 | Msa1364730:intron | 55.0% |
| CGCTCTAGTAAGCGGATAGC+TGG | + | tig0018186:66078-66097 | Msa1364730:CDS | 55.0% | |
| GGCCTGGGAAAAAGCAGTGG+AGG | + | tig0018186:62913-62932 | Msa1364730:intron | 60.0% | |
| CACGCTCTTGTCGCACTCGA+AGG | + | tig0018186:64696-64715 | Msa1364730:CDS | 60.0% | |
| AAGCGGATAGCTGGAGTCCC+TGG | + | tig0018186:66087-66106 | Msa1364730:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018186 | gene | 61832 | 66594 | 61832 | ID=Msa1364730;Name=Msa1364730 |
| tig0018186 | mRNA | 61832 | 66594 | 61832 | ID=Msa1364730-mRNA-1;Parent=Msa1364730;Name=Msa1364730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=209|1|1|1|1|1|11|346|465 |
| tig0018186 | exon | 61832 | 62181 | 61832 | ID=Msa1364730-mRNA-1:exon:14115;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 62298 | 62408 | 62298 | ID=Msa1364730-mRNA-1:exon:14116;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 63379 | 63465 | 63379 | ID=Msa1364730-mRNA-1:exon:14117;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 63570 | 63607 | 63570 | ID=Msa1364730-mRNA-1:exon:14118;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 63692 | 63773 | 63692 | ID=Msa1364730-mRNA-1:exon:14119;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 63980 | 64086 | 63980 | ID=Msa1364730-mRNA-1:exon:14120;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 64172 | 64328 | 64172 | ID=Msa1364730-mRNA-1:exon:14121;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 64414 | 64506 | 64414 | ID=Msa1364730-mRNA-1:exon:14122;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 64614 | 64737 | 64614 | ID=Msa1364730-mRNA-1:exon:14123;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 65395 | 65437 | 65395 | ID=Msa1364730-mRNA-1:exon:14124;Parent=Msa1364730-mRNA-1 |
| tig0018186 | exon | 65834 | 66594 | 65834 | ID=Msa1364730-mRNA-1:exon:14125;Parent=Msa1364730-mRNA-1 |
| tig0018186 | five_prime_UTR | 61832 | 62040 | 61832 | ID=Msa1364730-mRNA-1:five_prime_utr;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 62041 | 62181 | 62041 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 62298 | 62408 | 62298 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 63379 | 63465 | 63379 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 63570 | 63607 | 63570 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 63692 | 63773 | 63692 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 63980 | 64086 | 63980 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 64172 | 64328 | 64172 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 64414 | 64506 | 64414 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 64614 | 64737 | 64614 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 65395 | 65437 | 65395 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | CDS | 65834 | 66248 | 65834 | ID=Msa1364730-mRNA-1:cds;Parent=Msa1364730-mRNA-1 |
| tig0018186 | three_prime_UTR | 66249 | 66594 | 66249 | ID=Msa1364730-mRNA-1:three_prime_utr;Parent=Msa1364730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
