Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347770 | XP_004499716.1 | 97.727 | 132 | 3 | 0 | 1 | 132 | 1 | 132 | 6.46e-91 | 269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347770 | sp|A4FVI0|ZSWM7_DANRE | 36.923 | 130 | 74 | 4 | 7 | 131 | 8 | 134 | 1.06e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347770 | A0A1S2Y5H0 | 97.727 | 132 | 3 | 0 | 1 | 132 | 1 | 132 | 3.08e-91 | 269 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0347770 | 0.804185 | 2.439054e-49 | -8.615850e-47 |
| Msa0011170 | Msa0347770 | 0.828470 | 8.832513e-55 | -8.615850e-47 |
| Msa0014710 | Msa0347770 | 0.802054 | 6.729324e-49 | -8.615850e-47 |
| Msa0015390 | Msa0347770 | 0.809849 | 1.544012e-50 | -8.615850e-47 |
| Msa0017510 | Msa0347770 | 0.864745 | 9.746222e-65 | -8.615850e-47 |
| Msa0028640 | Msa0347770 | 0.807994 | 3.851237e-50 | -8.615850e-47 |
| Msa0031340 | Msa0347770 | 0.810030 | 1.411513e-50 | -8.615850e-47 |
| Msa0037700 | Msa0347770 | 0.808950 | 2.407688e-50 | -8.615850e-47 |
| Msa0040450 | Msa0347770 | 0.829889 | 3.997588e-55 | -8.615850e-47 |
| Msa0053780 | Msa0347770 | 0.807728 | 4.386108e-50 | -8.615850e-47 |
| Msa0068680 | Msa0347770 | 0.807762 | 4.315217e-50 | -8.615850e-47 |
| Msa0078650 | Msa0347770 | 0.801752 | 7.763047e-49 | -8.615850e-47 |
| Msa0078900 | Msa0347770 | 0.800567 | 1.356304e-48 | -8.615850e-47 |
| Msa0084380 | Msa0347770 | 0.808069 | 3.712778e-50 | -8.615850e-47 |
| Msa0084940 | Msa0347770 | 0.806952 | 6.407249e-50 | -8.615850e-47 |
| Msa0086650 | Msa0347770 | 0.809346 | 1.980387e-50 | -8.615850e-47 |
| Msa0090100 | Msa0347770 | 0.814308 | 1.646362e-51 | -8.615850e-47 |
| Msa0098370 | Msa0347770 | 0.805080 | 1.586794e-49 | -8.615850e-47 |
| Msa0110970 | Msa0347770 | 0.828006 | 1.142898e-54 | -8.615850e-47 |
| Msa0114060 | Msa0347770 | 0.821601 | 3.702619e-53 | -8.615850e-47 |
| Msa0115270 | Msa0347770 | 0.815407 | 9.393658e-52 | -8.615850e-47 |
| Msa0115360 | Msa0347770 | 0.807165 | 5.773990e-50 | -8.615850e-47 |
| Msa0116770 | Msa0347770 | 0.803377 | 3.588337e-49 | -8.615850e-47 |
| Msa0124340 | Msa0347770 | 0.806556 | 7.769321e-50 | -8.615850e-47 |
| Msa0128020 | Msa0347770 | 0.800593 | 1.339789e-48 | -8.615850e-47 |
| Msa0133130 | Msa0347770 | 0.814510 | 1.485495e-51 | -8.615850e-47 |
| Msa0136070 | Msa0347770 | 0.806588 | 7.647440e-50 | -8.615850e-47 |
| Msa0140780 | Msa0347770 | 0.815437 | 9.249742e-52 | -8.615850e-47 |
| Msa0140860 | Msa0347770 | 0.815309 | 9.875122e-52 | -8.615850e-47 |
| Msa0145440 | Msa0347770 | 0.815954 | 7.092416e-52 | -8.615850e-47 |
| Msa0148100 | Msa0347770 | 0.808275 | 3.355230e-50 | -8.615850e-47 |
| Msa0151180 | Msa0347770 | 0.807625 | 4.613093e-50 | -8.615850e-47 |
| Msa0157290 | Msa0347770 | 0.864339 | 1.305259e-64 | -8.615850e-47 |
| Msa0159930 | Msa0347770 | 0.816370 | 5.728350e-52 | -8.615850e-47 |
| Msa0165220 | Msa0347770 | 0.805084 | 1.583746e-49 | -8.615850e-47 |
| Msa0171290 | Msa0347770 | 0.800790 | 1.221368e-48 | -8.615850e-47 |
| Msa0173990 | Msa0347770 | 0.820875 | 5.442764e-53 | -8.615850e-47 |
| Msa0182680 | Msa0347770 | 0.804620 | 1.979092e-49 | -8.615850e-47 |
| Msa0191050 | Msa0347770 | 0.801269 | 9.749191e-49 | -8.615850e-47 |
| Msa0192510 | Msa0347770 | 0.809341 | 1.984937e-50 | -8.615850e-47 |
| Msa0195980 | Msa0347770 | 0.808349 | 3.235935e-50 | -8.615850e-47 |
| Msa0200260 | Msa0347770 | 0.827707 | 1.347953e-54 | -8.615850e-47 |
| Msa0202950 | Msa0347770 | 0.815564 | 8.664464e-52 | -8.615850e-47 |
| Msa0205510 | Msa0347770 | 0.820911 | 5.341751e-53 | -8.615850e-47 |
| Msa0211150 | Msa0347770 | 0.804905 | 1.725897e-49 | -8.615850e-47 |
| Msa0212990 | Msa0347770 | 0.802082 | 6.641267e-49 | -8.615850e-47 |
| Msa0216240 | Msa0347770 | 0.800818 | 1.205434e-48 | -8.615850e-47 |
| Msa0220580 | Msa0347770 | 0.838485 | 2.796022e-57 | -8.615850e-47 |
| Msa0220740 | Msa0347770 | 0.823754 | 1.168107e-53 | -8.615850e-47 |
| Msa0222620 | Msa0347770 | 0.808981 | 2.370754e-50 | -8.615850e-47 |
| Msa0223690 | Msa0347770 | 0.808496 | 3.009756e-50 | -8.615850e-47 |
| Msa0233350 | Msa0347770 | 0.811467 | 6.901703e-51 | -8.615850e-47 |
| Msa0237230 | Msa0347770 | 0.816542 | 5.240454e-52 | -8.615850e-47 |
| Msa0243100 | Msa0347770 | 0.855077 | 8.034067e-62 | -8.615850e-47 |
| Msa0243710 | Msa0347770 | 0.823412 | 1.404426e-53 | -8.615850e-47 |
| Msa0244860 | Msa0347770 | 0.810842 | 9.425532e-51 | -8.615850e-47 |
| Msa0244960 | Msa0347770 | 0.803558 | 3.292411e-49 | -8.615850e-47 |
| Msa0246430 | Msa0347770 | 0.800466 | 1.422714e-48 | -8.615850e-47 |
| Msa0257460 | Msa0347770 | 0.824267 | 8.853632e-54 | -8.615850e-47 |
| Msa0259370 | Msa0347770 | 0.801311 | 9.559823e-49 | -8.615850e-47 |
| Msa0264150 | Msa0347770 | 0.811589 | 6.491128e-51 | -8.615850e-47 |
| Msa0264930 | Msa0347770 | 0.804199 | 2.422561e-49 | -8.615850e-47 |
| Msa0271530 | Msa0347770 | 0.808552 | 2.927812e-50 | -8.615850e-47 |
| Msa0280090 | Msa0347770 | 0.805586 | 1.242926e-49 | -8.615850e-47 |
| Msa0282250 | Msa0347770 | 0.816969 | 4.204328e-52 | -8.615850e-47 |
| Msa0283450 | Msa0347770 | 0.807366 | 5.235562e-50 | -8.615850e-47 |
| Msa0283520 | Msa0347770 | 0.803203 | 3.898626e-49 | -8.615850e-47 |
| Msa0284420 | Msa0347770 | 0.825382 | 4.833288e-54 | -8.615850e-47 |
| Msa0287650 | Msa0347770 | 0.844841 | 5.887004e-59 | -8.615850e-47 |
| Msa0288100 | Msa0347770 | 0.824167 | 9.346950e-54 | -8.615850e-47 |
| Msa0291500 | Msa0347770 | 0.818841 | 1.587743e-52 | -8.615850e-47 |
| Msa0306210 | Msa0347770 | -0.801625 | 8.243439e-49 | -8.615850e-47 |
| Msa0309770 | Msa0347770 | 0.800246 | 1.576826e-48 | -8.615850e-47 |
| Msa0311700 | Msa0347770 | 0.820045 | 8.440155e-53 | -8.615850e-47 |
| Msa0323610 | Msa0347770 | 0.803008 | 4.278475e-49 | -8.615850e-47 |
| Msa0332000 | Msa0347770 | 0.808832 | 2.551646e-50 | -8.615850e-47 |
| Msa0333920 | Msa0347770 | 0.801231 | 9.926569e-49 | -8.615850e-47 |
| Msa0334360 | Msa0347770 | 0.820601 | 6.292506e-53 | -8.615850e-47 |
| Msa0339250 | Msa0347770 | 0.805357 | 1.388127e-49 | -8.615850e-47 |
| Msa0344910 | Msa0347770 | 0.810439 | 1.152225e-50 | -8.615850e-47 |
| Msa0345970 | Msa0347770 | 0.810261 | 1.258580e-50 | -8.615850e-47 |
| Msa0347770 | Msa0357340 | 0.807554 | 4.775193e-50 | -8.615850e-47 |
| Msa0347770 | Msa0359030 | 0.821664 | 3.580988e-53 | -8.615850e-47 |
| Msa0347770 | Msa0367870 | 0.803762 | 2.986360e-49 | -8.615850e-47 |
| Msa0347770 | Msa0369050 | 0.806077 | 9.799209e-50 | -8.615850e-47 |
| Msa0347770 | Msa0373930 | 0.826845 | 2.169075e-54 | -8.615850e-47 |
| Msa0347770 | Msa0376350 | 0.831473 | 1.636273e-55 | -8.615850e-47 |
| Msa0347770 | Msa0379640 | 0.825097 | 5.645287e-54 | -8.615850e-47 |
| Msa0347770 | Msa0381400 | 0.803096 | 4.103057e-49 | -8.615850e-47 |
| Msa0347770 | Msa0394490 | 0.963071 | 1.224196e-121 | -8.615850e-47 |
| Msa0347770 | Msa0402790 | 0.802841 | 4.633331e-49 | -8.615850e-47 |
| Msa0347770 | Msa0410650 | 0.826744 | 2.293490e-54 | -8.615850e-47 |
| Msa0347770 | Msa0416300 | 0.818608 | 1.793365e-52 | -8.615850e-47 |
| Msa0347770 | Msa0417270 | 0.830386 | 3.024247e-55 | -8.615850e-47 |
| Msa0347770 | Msa0420960 | 0.816834 | 4.507114e-52 | -8.615850e-47 |
| Msa0347770 | Msa0424790 | 0.819452 | 1.153045e-52 | -8.615850e-47 |
| Msa0347770 | Msa0433640 | 0.810875 | 9.273319e-51 | -8.615850e-47 |
| Msa0347770 | Msa0436050 | 0.804755 | 1.855157e-49 | -8.615850e-47 |
| Msa0347770 | Msa0440750 | 0.824584 | 7.455781e-54 | -8.615850e-47 |
| Msa0347770 | Msa0442100 | 0.913047 | 9.669324e-84 | -8.615850e-47 |
| Msa0347770 | Msa0461720 | 0.822735 | 2.020848e-53 | -8.615850e-47 |
| Msa0347770 | Msa0466390 | 0.803615 | 3.203737e-49 | -8.615850e-47 |
| Msa0347770 | Msa0467060 | 0.826755 | 2.279130e-54 | -8.615850e-47 |
| Msa0347770 | Msa0471800 | 0.801682 | 8.025261e-49 | -8.615850e-47 |
| Msa0347770 | Msa0479170 | 0.808822 | 2.564157e-50 | -8.615850e-47 |
| Msa0347770 | Msa0479660 | 0.839619 | 1.422194e-57 | -8.615850e-47 |
| Msa0347770 | Msa0481530 | 0.822250 | 2.618670e-53 | -8.615850e-47 |
| Msa0347770 | Msa0484780 | 0.813195 | 2.894601e-51 | -8.615850e-47 |
| Msa0347770 | Msa0488560 | 0.801203 | 1.006095e-48 | -8.615850e-47 |
| Msa0347770 | Msa0493630 | 0.800606 | 1.332177e-48 | -8.615850e-47 |
| Msa0347770 | Msa0495320 | 0.808329 | 3.267902e-50 | -8.615850e-47 |
| Msa0347770 | Msa0498650 | 0.818949 | 1.501090e-52 | -8.615850e-47 |
| Msa0347770 | Msa0500360 | 0.819277 | 1.263718e-52 | -8.615850e-47 |
| Msa0347770 | Msa0507680 | 0.827574 | 1.450953e-54 | -8.615850e-47 |
| Msa0347770 | Msa0509390 | 0.808354 | 3.226847e-50 | -8.615850e-47 |
| Msa0347770 | Msa0512900 | 0.830672 | 2.573936e-55 | -8.615850e-47 |
| Msa0347770 | Msa0516170 | 0.825646 | 4.184516e-54 | -8.615850e-47 |
| Msa0347770 | Msa0517110 | 0.821768 | 3.387781e-53 | -8.615850e-47 |
| Msa0347770 | Msa0519740 | 0.805816 | 1.112261e-49 | -8.615850e-47 |
| Msa0347770 | Msa0521430 | 0.806867 | 6.678277e-50 | -8.615850e-47 |
| Msa0347770 | Msa0521540 | 0.805930 | 1.052426e-49 | -8.615850e-47 |
| Msa0347770 | Msa0523270 | 0.805052 | 1.607727e-49 | -8.615850e-47 |
| Msa0347770 | Msa0523460 | 0.826622 | 2.451779e-54 | -8.615850e-47 |
| Msa0347770 | Msa0529040 | 0.800326 | 1.519133e-48 | -8.615850e-47 |
| Msa0347770 | Msa0529680 | 0.802744 | 4.851589e-49 | -8.615850e-47 |
| Msa0347770 | Msa0529890 | 0.825551 | 4.407187e-54 | -8.615850e-47 |
| Msa0347770 | Msa0545070 | 0.806168 | 9.375254e-50 | -8.615850e-47 |
| Msa0347770 | Msa0547890 | 0.816017 | 6.869700e-52 | -8.615850e-47 |
| Msa0347770 | Msa0550430 | 0.804457 | 2.141042e-49 | -8.615850e-47 |
| Msa0347770 | Msa0562440 | 0.804790 | 1.823929e-49 | -8.615850e-47 |
| Msa0347770 | Msa0563840 | 0.806084 | 9.764508e-50 | -8.615850e-47 |
| Msa0347770 | Msa0574890 | 0.800520 | 1.386900e-48 | -8.615850e-47 |
| Msa0347770 | Msa0577500 | 0.814151 | 1.783171e-51 | -8.615850e-47 |
| Msa0347770 | Msa0585230 | 0.806657 | 7.393933e-50 | -8.615850e-47 |
| Msa0347770 | Msa0585560 | 0.820800 | 5.664709e-53 | -8.615850e-47 |
| Msa0347770 | Msa0593650 | 0.816535 | 5.259786e-52 | -8.615850e-47 |
| Msa0347770 | Msa0597330 | 0.816247 | 6.102069e-52 | -8.615850e-47 |
| Msa0347770 | Msa0599890 | 0.822788 | 1.964410e-53 | -8.615850e-47 |
| Msa0347770 | Msa0607050 | 0.819038 | 1.432292e-52 | -8.615850e-47 |
| Msa0347770 | Msa0610430 | 0.830725 | 2.498275e-55 | -8.615850e-47 |
| Msa0347770 | Msa0616160 | 0.800055 | 1.724596e-48 | -8.615850e-47 |
| Msa0347770 | Msa0625720 | 0.823733 | 1.181415e-53 | -8.615850e-47 |
| Msa0347770 | Msa0638070 | 0.811003 | 8.701832e-51 | -8.615850e-47 |
| Msa0347770 | Msa0657970 | 0.829474 | 5.046001e-55 | -8.615850e-47 |
| Msa0347770 | Msa0661190 | -0.811035 | 8.561254e-51 | -8.615850e-47 |
| Msa0347770 | Msa0661650 | 0.803055 | 4.184264e-49 | -8.615850e-47 |
| Msa0347770 | Msa0663240 | 0.812067 | 5.107507e-51 | -8.615850e-47 |
| Msa0347770 | Msa0663390 | 0.827958 | 1.173279e-54 | -8.615850e-47 |
| Msa0347770 | Msa0663920 | 0.808575 | 2.894788e-50 | -8.615850e-47 |
| Msa0347770 | Msa0667050 | 0.817360 | 3.432883e-52 | -8.615850e-47 |
| Msa0347770 | Msa0669320 | 0.800058 | 1.722176e-48 | -8.615850e-47 |
| Msa0347770 | Msa0672690 | 0.806217 | 9.156562e-50 | -8.615850e-47 |
| Msa0347770 | Msa0673460 | 0.811759 | 5.960584e-51 | -8.615850e-47 |
| Msa0347770 | Msa0688480 | 0.820692 | 5.997447e-53 | -8.615850e-47 |
| Msa0347770 | Msa0690150 | 0.808958 | 2.397476e-50 | -8.615850e-47 |
| Msa0347770 | Msa0691380 | 0.807910 | 4.011816e-50 | -8.615850e-47 |
| Msa0347770 | Msa0692230 | 0.803437 | 3.487417e-49 | -8.615850e-47 |
| Msa0347770 | Msa0693380 | 0.828527 | 8.558027e-55 | -8.615850e-47 |
| Msa0347770 | Msa0696640 | 0.806802 | 6.892339e-50 | -8.615850e-47 |
| Msa0347770 | Msa0705870 | 0.802512 | 5.417334e-49 | -8.615850e-47 |
| Msa0347770 | Msa0708520 | 0.806436 | 8.235691e-50 | -8.615850e-47 |
| Msa0347770 | Msa0709400 | 0.806053 | 9.915703e-50 | -8.615850e-47 |
| Msa0347770 | Msa0709500 | 0.802649 | 5.074414e-49 | -8.615850e-47 |
| Msa0347770 | Msa0723990 | 0.803415 | 3.525166e-49 | -8.615850e-47 |
| Msa0347770 | Msa0740510 | 0.818045 | 2.406021e-52 | -8.615850e-47 |
| Msa0347770 | Msa0743720 | 0.834716 | 2.552518e-56 | -8.615850e-47 |
| Msa0347770 | Msa0745790 | 0.802686 | 4.987851e-49 | -8.615850e-47 |
| Msa0347770 | Msa0764570 | 0.807165 | 5.776235e-50 | -8.615850e-47 |
| Msa0347770 | Msa0765380 | 0.809845 | 1.547149e-50 | -8.615850e-47 |
| Msa0347770 | Msa0771720 | 0.819988 | 8.695581e-53 | -8.615850e-47 |
| Msa0347770 | Msa0777230 | 0.819375 | 1.200676e-52 | -8.615850e-47 |
| Msa0347770 | Msa0787470 | 0.807766 | 4.305343e-50 | -8.615850e-47 |
| Msa0347770 | Msa0808080 | 0.807917 | 3.999834e-50 | -8.615850e-47 |
| Msa0347770 | Msa0820770 | 0.820638 | 6.170933e-53 | -8.615850e-47 |
| Msa0347770 | Msa0820850 | 0.803882 | 2.819676e-49 | -8.615850e-47 |
| Msa0347770 | Msa0824680 | 0.818686 | 1.722484e-52 | -8.615850e-47 |
| Msa0347770 | Msa0828560 | 0.800033 | 1.742642e-48 | -8.615850e-47 |
| Msa0347770 | Msa0832340 | 0.804017 | 2.643525e-49 | -8.615850e-47 |
| Msa0347770 | Msa0844240 | 0.820092 | 8.234731e-53 | -8.615850e-47 |
| Msa0347770 | Msa0849030 | 0.808768 | 2.633595e-50 | -8.615850e-47 |
| Msa0347770 | Msa0857640 | 0.819281 | 1.261364e-52 | -8.615850e-47 |
| Msa0347770 | Msa0861090 | 0.815817 | 7.610191e-52 | -8.615850e-47 |
| Msa0347770 | Msa0861130 | 0.800208 | 1.605096e-48 | -8.615850e-47 |
| Msa0347770 | Msa0871270 | 0.822368 | 2.459495e-53 | -8.615850e-47 |
| Msa0347770 | Msa0880140 | 0.863012 | 3.371370e-64 | -8.615850e-47 |
| Msa0347770 | Msa0893950 | 0.800077 | 1.707101e-48 | -8.615850e-47 |
| Msa0347770 | Msa0896750 | 0.815766 | 7.812443e-52 | -8.615850e-47 |
| Msa0347770 | Msa0902760 | 0.809871 | 1.527421e-50 | -8.615850e-47 |
| Msa0347770 | Msa0909120 | 0.800032 | 1.743361e-48 | -8.615850e-47 |
| Msa0347770 | Msa0922410 | 0.802837 | 4.641650e-49 | -8.615850e-47 |
| Msa0347770 | Msa0923330 | 0.803039 | 4.215935e-49 | -8.615850e-47 |
| Msa0347770 | Msa0931520 | 0.804542 | 2.055205e-49 | -8.615850e-47 |
| Msa0347770 | Msa0933230 | 0.819463 | 1.146071e-52 | -8.615850e-47 |
| Msa0347770 | Msa0933310 | 0.801758 | 7.739533e-49 | -8.615850e-47 |
| Msa0347770 | Msa0936300 | 0.802375 | 5.780245e-49 | -8.615850e-47 |
| Msa0347770 | Msa0938220 | 0.824775 | 6.722811e-54 | -8.615850e-47 |
| Msa0347770 | Msa0942200 | 0.801316 | 9.536487e-49 | -8.615850e-47 |
| Msa0347770 | Msa0944190 | 0.809057 | 2.283702e-50 | -8.615850e-47 |
| Msa0347770 | Msa0953550 | 0.827119 | 1.865466e-54 | -8.615850e-47 |
| Msa0347770 | Msa0954130 | 0.833046 | 6.676107e-56 | -8.615850e-47 |
| Msa0347770 | Msa0954530 | 0.800532 | 1.378788e-48 | -8.615850e-47 |
| Msa0347770 | Msa0954550 | 0.830722 | 2.501723e-55 | -8.615850e-47 |
| Msa0347770 | Msa0959360 | 0.808187 | 3.503463e-50 | -8.615850e-47 |
| Msa0347770 | Msa0963270 | 0.818371 | 2.030063e-52 | -8.615850e-47 |
| Msa0347770 | Msa0969520 | 0.814542 | 1.461243e-51 | -8.615850e-47 |
| Msa0347770 | Msa0971090 | 0.805564 | 1.256292e-49 | -8.615850e-47 |
| Msa0347770 | Msa0975340 | 0.822600 | 2.171576e-53 | -8.615850e-47 |
| Msa0347770 | Msa0990350 | 0.807172 | 5.754106e-50 | -8.615850e-47 |
| Msa0347770 | Msa0993290 | 0.833314 | 5.727066e-56 | -8.615850e-47 |
| Msa0347770 | Msa0993600 | 0.832926 | 7.152123e-56 | -8.615850e-47 |
| Msa0347770 | Msa1004550 | 0.830109 | 3.533107e-55 | -8.615850e-47 |
| Msa0347770 | Msa1004600 | 0.821204 | 4.571101e-53 | -8.615850e-47 |
| Msa0347770 | Msa1013400 | 0.816536 | 5.256845e-52 | -8.615850e-47 |
| Msa0347770 | Msa1014540 | 0.843719 | 1.178348e-58 | -8.615850e-47 |
| Msa0347770 | Msa1023920 | 0.802567 | 5.276233e-49 | -8.615850e-47 |
| Msa0347770 | Msa1030970 | 0.811183 | 7.954246e-51 | -8.615850e-47 |
| Msa0347770 | Msa1040400 | 0.809575 | 1.767863e-50 | -8.615850e-47 |
| Msa0347770 | Msa1043390 | 0.808549 | 2.932742e-50 | -8.615850e-47 |
| Msa0347770 | Msa1043450 | 0.813378 | 2.638804e-51 | -8.615850e-47 |
| Msa0347770 | Msa1045200 | 0.803801 | 2.931073e-49 | -8.615850e-47 |
| Msa0347770 | Msa1046020 | 0.802242 | 6.155127e-49 | -8.615850e-47 |
| Msa0347770 | Msa1046060 | 0.800423 | 1.451158e-48 | -8.615850e-47 |
| Msa0347770 | Msa1075220 | -0.815240 | 1.023286e-51 | -8.615850e-47 |
| Msa0347770 | Msa1075540 | 0.805897 | 1.069082e-49 | -8.615850e-47 |
| Msa0347770 | Msa1079590 | 0.825066 | 5.740806e-54 | -8.615850e-47 |
| Msa0347770 | Msa1082500 | 0.857126 | 2.018009e-62 | -8.615850e-47 |
| Msa0347770 | Msa1085200 | 0.831595 | 1.526922e-55 | -8.615850e-47 |
| Msa0347770 | Msa1085800 | 0.811304 | 7.485750e-51 | -8.615850e-47 |
| Msa0347770 | Msa1093530 | 0.811673 | 6.223468e-51 | -8.615850e-47 |
| Msa0347770 | Msa1108160 | 0.804272 | 2.339051e-49 | -8.615850e-47 |
| Msa0347770 | Msa1116130 | -0.809754 | 1.618394e-50 | -8.615850e-47 |
| Msa0347770 | Msa1124410 | 0.802628 | 5.126249e-49 | -8.615850e-47 |
| Msa0347770 | Msa1124960 | 0.806049 | 9.934222e-50 | -8.615850e-47 |
| Msa0347770 | Msa1125760 | 0.806503 | 7.969766e-50 | -8.615850e-47 |
| Msa0347770 | Msa1127890 | 0.805558 | 1.259685e-49 | -8.615850e-47 |
| Msa0347770 | Msa1128710 | 0.819957 | 8.839729e-53 | -8.615850e-47 |
| Msa0347770 | Msa1129730 | 0.810502 | 1.116323e-50 | -8.615850e-47 |
| Msa0347770 | Msa1131220 | 0.825805 | 3.837130e-54 | -8.615850e-47 |
| Msa0347770 | Msa1134110 | 0.808502 | 3.000814e-50 | -8.615850e-47 |
| Msa0347770 | Msa1137570 | 0.808646 | 2.796329e-50 | -8.615850e-47 |
| Msa0347770 | Msa1151910 | 0.807624 | 4.615122e-50 | -8.615850e-47 |
| Msa0347770 | Msa1154280 | 0.811112 | 8.239938e-51 | -8.615850e-47 |
| Msa0347770 | Msa1162550 | -0.816010 | 6.893317e-52 | -8.615850e-47 |
| Msa0347770 | Msa1167340 | 0.819434 | 1.163977e-52 | -8.615850e-47 |
| Msa0347770 | Msa1168160 | 0.817865 | 2.642067e-52 | -8.615850e-47 |
| Msa0347770 | Msa1171360 | 0.801023 | 1.094948e-48 | -8.615850e-47 |
| Msa0347770 | Msa1172670 | 0.815179 | 1.055721e-51 | -8.615850e-47 |
| Msa0347770 | Msa1174040 | 0.820796 | 5.676272e-53 | -8.615850e-47 |
| Msa0347770 | Msa1179460 | 0.802116 | 6.533666e-49 | -8.615850e-47 |
| Msa0347770 | Msa1189070 | 0.800704 | 1.272306e-48 | -8.615850e-47 |
| Msa0347770 | Msa1190930 | 0.803525 | 3.343816e-49 | -8.615850e-47 |
| Msa0347770 | Msa1193290 | 0.810877 | 9.263461e-51 | -8.615850e-47 |
| Msa0347770 | Msa1199220 | 0.815400 | 9.428569e-52 | -8.615850e-47 |
| Msa0347770 | Msa1211150 | -0.812093 | 5.042095e-51 | -8.615850e-47 |
| Msa0347770 | Msa1218600 | 0.809020 | 2.326172e-50 | -8.615850e-47 |
| Msa0347770 | Msa1226660 | 0.816646 | 4.966368e-52 | -8.615850e-47 |
| Msa0347770 | Msa1228590 | 0.800014 | 1.757896e-48 | -8.615850e-47 |
| Msa0347770 | Msa1233500 | 0.802606 | 5.180896e-49 | -8.615850e-47 |
| Msa0347770 | Msa1233890 | 0.835745 | 1.403223e-56 | -8.615850e-47 |
| Msa0347770 | Msa1238930 | 0.812559 | 3.989515e-51 | -8.615850e-47 |
| Msa0347770 | Msa1242220 | 0.803449 | 3.468112e-49 | -8.615850e-47 |
| Msa0347770 | Msa1244250 | 0.823666 | 1.224816e-53 | -8.615850e-47 |
| Msa0347770 | Msa1244610 | 0.802955 | 4.388216e-49 | -8.615850e-47 |
| Msa0347770 | Msa1247250 | 0.834660 | 2.636177e-56 | -8.615850e-47 |
| Msa0347770 | Msa1251730 | 0.835955 | 1.241356e-56 | -8.615850e-47 |
| Msa0347770 | Msa1253020 | 0.812864 | 3.421115e-51 | -8.615850e-47 |
| Msa0347770 | Msa1254510 | 0.800216 | 1.599327e-48 | -8.615850e-47 |
| Msa0347770 | Msa1259590 | -0.801045 | 1.083735e-48 | -8.615850e-47 |
| Msa0347770 | Msa1275360 | 0.825050 | 5.790922e-54 | -8.615850e-47 |
| Msa0347770 | Msa1279210 | 0.812435 | 4.246941e-51 | -8.615850e-47 |
| Msa0347770 | Msa1279400 | 0.802505 | 5.434992e-49 | -8.615850e-47 |
| Msa0347770 | Msa1283860 | 0.819094 | 1.390978e-52 | -8.615850e-47 |
| Msa0347770 | Msa1284680 | 0.832124 | 1.130832e-55 | -8.615850e-47 |
| Msa0347770 | Msa1288420 | 0.805564 | 1.256292e-49 | -8.615850e-47 |
| Msa0347770 | Msa1293280 | 0.816435 | 5.539032e-52 | -8.615850e-47 |
| Msa0347770 | Msa1293510 | 0.826868 | 2.141367e-54 | -8.615850e-47 |
| Msa0347770 | Msa1296940 | 0.800349 | 1.502963e-48 | -8.615850e-47 |
| Msa0347770 | Msa1299300 | -0.807281 | 5.456271e-50 | -8.615850e-47 |
| Msa0347770 | Msa1303250 | 0.800031 | 1.743591e-48 | -8.615850e-47 |
| Msa0347770 | Msa1305190 | 0.806722 | 7.166895e-50 | -8.615850e-47 |
| Msa0347770 | Msa1305340 | 0.836747 | 7.804383e-57 | -8.615850e-47 |
| Msa0347770 | Msa1306840 | 0.811897 | 5.562396e-51 | -8.615850e-47 |
| Msa0347770 | Msa1308380 | 0.809809 | 1.574518e-50 | -8.615850e-47 |
| Msa0347770 | Msa1320410 | 0.807411 | 5.122269e-50 | -8.615850e-47 |
| Msa0347770 | Msa1322890 | 0.801792 | 7.618843e-49 | -8.615850e-47 |
| Msa0347770 | Msa1327550 | 0.804722 | 1.884645e-49 | -8.615850e-47 |
| Msa0347770 | Msa1327680 | 0.805544 | 1.268197e-49 | -8.615850e-47 |
| Msa0347770 | Msa1336710 | 0.804451 | 2.146603e-49 | -8.615850e-47 |
| Msa0347770 | Msa1340650 | 0.813451 | 2.542417e-51 | -8.615850e-47 |
| Msa0347770 | Msa1346370 | 0.804356 | 2.246675e-49 | -8.615850e-47 |
| Msa0347770 | Msa1348950 | 0.804489 | 2.107711e-49 | -8.615850e-47 |
| Msa0347770 | Msa1353470 | 0.812685 | 3.743928e-51 | -8.615850e-47 |
| Msa0347770 | Msa1353980 | 0.816707 | 4.813523e-52 | -8.615850e-47 |
| Msa0347770 | Msa1357530 | 0.813133 | 2.986539e-51 | -8.615850e-47 |
| Msa0347770 | Msa1359040 | 0.805154 | 1.530789e-49 | -8.615850e-47 |
| Msa0347770 | Msa1364730 | 0.814004 | 1.921306e-51 | -8.615850e-47 |
| Msa0347770 | Msa1372760 | 0.809210 | 2.118072e-50 | -8.615850e-47 |
| Msa0347770 | Msa1375170 | 0.811822 | 5.775987e-51 | -8.615850e-47 |
| Msa0347770 | Msa1385670 | 0.816912 | 4.330348e-52 | -8.615850e-47 |
| Msa0347770 | Msa1386780 | 0.802289 | 6.021760e-49 | -8.615850e-47 |
| Msa0347770 | Msa1390050 | 0.808796 | 2.596937e-50 | -8.615850e-47 |
| Msa0347770 | Msa1392260 | 0.800169 | 1.634763e-48 | -8.615850e-47 |
| Msa0347770 | Msa1409870 | 0.807809 | 4.216944e-50 | -8.615850e-47 |
| Msa0347770 | Msa1411020 | 0.825700 | 4.063120e-54 | -8.615850e-47 |
| Msa0347770 | Msa1420490 | 0.824928 | 6.185821e-54 | -8.615850e-47 |
| Msa0347770 | Msa1423390 | 0.827072 | 1.914022e-54 | -8.615850e-47 |
| Msa0347770 | Msa1424290 | 0.819630 | 1.049863e-52 | -8.615850e-47 |
| Msa0347770 | Msa1424450 | 0.816602 | 5.082475e-52 | -8.615850e-47 |
| Msa0347770 | Msa1434350 | 0.820031 | 8.503199e-53 | -8.615850e-47 |
| Msa0347770 | Msa1439320 | 0.826680 | 2.375851e-54 | -8.615850e-47 |
| Msa0347770 | Msa1440370 | 0.821781 | 3.364727e-53 | -8.615850e-47 |
| Msa0347770 | Msa1440810 | 0.821435 | 4.043538e-53 | -8.615850e-47 |
| Msa0347770 | Msa1451550 | 0.827413 | 1.586592e-54 | -8.615850e-47 |
| Msa0347770 | Msa1452120 | 0.801750 | 7.770659e-49 | -8.615850e-47 |
| Msa0347770 | Msa1452240 | 0.820450 | 6.817437e-53 | -8.615850e-47 |
| Msa0347770 | Msa1462290 | 0.805551 | 1.264107e-49 | -8.615850e-47 |
| Msa0347770 | Msa1464940 | 0.806765 | 7.017931e-50 | -8.615850e-47 |
| Msa0347770 | Msa1466540 | 0.803041 | 4.212808e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347770 | MtrunA17_Chr3g0080161 | 97.727 | 132 | 3 | 0 | 1 | 132 | 1 | 132 | 1.54e-94 | 268 |
| Msa0347770 | MtrunA17_Chr4g0022281 | 94.286 | 35 | 2 | 0 | 29 | 63 | 8 | 42 | 1.18e-18 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347770 | AT4G33925.1 | 68.182 | 132 | 42 | 0 | 1 | 132 | 1 | 132 | 4.66e-65 | 194 |
| Msa0347770 | AT4G33925.2 | 67.227 | 119 | 39 | 0 | 1 | 119 | 1 | 119 | 9.73e-58 | 175 |
Find 25 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTGGAAGGTTTATCTTTC+AGG | 0.114852 | 3_1:+9006000 | Msa0347770:CDS |
| AACAGATTACATTTCTTATT+TGG | 0.148809 | 3_1:+9005911 | Msa0347770:intron |
| AGAGGTGTTAAGAAGATTTC+TGG | 0.215942 | 3_1:+9005971 | Msa0347770:CDS |
| GCAAGACTCGCTGCATCATT+AGG | 0.352521 | 3_1:+9006979 | Msa0347770:CDS |
| ATCATAGAAGAAAGAATAAC+AGG | 0.376490 | 3_1:-9006775 | None:intergenic |
| GAAGATGAGTGCAAGTAGTT+TGG | 0.377089 | 3_1:+9005571 | Msa0347770:exon |
| AAAACAAAGACTTTGCTTTG+TGG | 0.399607 | 3_1:+9007083 | Msa0347770:three_prime_UTR |
| TTTCAGCAAAACACAGATAC+TGG | 0.406479 | 3_1:-9006743 | None:intergenic |
| CTTATTTGGTAAGAACTTTG+AGG | 0.428015 | 3_1:+9005925 | Msa0347770:CDS |
| CTTAGGTTACAGGGGAATCC+AGG | 0.438788 | 3_1:+9006712 | Msa0347770:intron |
| TTATTTGGTAAGAACTTTGA+GGG | 0.454021 | 3_1:+9005926 | Msa0347770:CDS |
| GTTTGGTAGCAGATGAAGTG+TGG | 0.490865 | 3_1:+9005588 | Msa0347770:CDS |
| CTGAAAGATAAACCTTCCAC+TGG | 0.506282 | 3_1:-9005999 | None:intergenic |
| TGAGGGAGCTACTAGAATAG+TGG | 0.534495 | 3_1:+9005943 | Msa0347770:CDS |
| TCTATGATGTTGTCAACAGA+GGG | 0.540121 | 3_1:+9006790 | Msa0347770:CDS |
| TTCTATGATGTTGTCAACAG+AGG | 0.568989 | 3_1:+9006789 | Msa0347770:CDS |
| TTTCTGGTGACCCCAGTGGA+AGG | 0.592488 | 3_1:+9005987 | Msa0347770:CDS |
| CGAAGTCAAGGTATCTGATG+AGG | 0.606772 | 3_1:+9007011 | Msa0347770:CDS |
| TGAAAGATAAACCTTCCACT+GGG | 0.609527 | 3_1:-9005998 | None:intergenic |
| AGGATCATATGTCGAAGTCA+AGG | 0.611050 | 3_1:+9006999 | Msa0347770:CDS |
| CAAATTGAATCAACACACAC+AGG | 0.654795 | 3_1:+9005614 | Msa0347770:CDS |
| AAGATTTCTGGTGACCCCAG+TGG | 0.679035 | 3_1:+9005983 | Msa0347770:CDS |
| ACTAGAATAGTGGATCAAAG+AGG | 0.694774 | 3_1:+9005953 | Msa0347770:CDS |
| CTATGATGTTGTCAACAGAG+GGG | 0.760944 | 3_1:+9006791 | Msa0347770:CDS |
| GAAAGATAAACCTTCCACTG+GGG | 0.779053 | 3_1:-9005997 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCAAAAATAATAAAGTAAAA+AGG | - | chr3_1:9005806-9005825 | None:intergenic | 15.0% |
| !!! | CCTTTTTACTTTATTATTTT+TGG | + | chr3_1:9005803-9005822 | Msa0347770:intron | 15.0% |
| !!! | AAAATTGATTTTGACATATT+TGG | - | chr3_1:9006444-9006463 | None:intergenic | 15.0% |
| !! | CCAAAAATAATAAAGTAAAA+AGG | - | chr3_1:9005806-9005825 | None:intergenic | 15.0% |
| !!! | CCTTTTTACTTTATTATTTT+TGG | + | chr3_1:9005803-9005822 | Msa0347770:intron | 15.0% |
| !!! | AAAATTGATTTTGACATATT+TGG | - | chr3_1:9006444-9006463 | None:intergenic | 15.0% |
| !! | AATTAAAGCAAAAATGTGTT+TGG | - | chr3_1:9005698-9005717 | None:intergenic | 20.0% |
| !! | TTTCTTAACTAATATAGCAT+AGG | + | chr3_1:9005836-9005855 | Msa0347770:intron | 20.0% |
| !!! | TTTGAACTTTGTATTTTTGT+TGG | + | chr3_1:9005870-9005889 | Msa0347770:intron | 20.0% |
| !! | AACAGATTACATTTCTTATT+TGG | + | chr3_1:9005911-9005930 | Msa0347770:intron | 20.0% |
| !! | AAACAAACAAACAAAAACAA+AGG | - | chr3_1:9006059-9006078 | None:intergenic | 20.0% |
| !! | TCAATTGAATAGTTTAAACT+AGG | + | chr3_1:9006114-9006133 | Msa0347770:intron | 20.0% |
| !! | AGTTGAACAATAAATTATAG+AGG | + | chr3_1:9006341-9006360 | Msa0347770:intron | 20.0% |
| !!! | ATCTTTTAGCTAATTATTAG+CGG | - | chr3_1:9006601-9006620 | None:intergenic | 20.0% |
| !! | AAAAATCGATCTAATTCTAA+TGG | - | chr3_1:9007198-9007217 | None:intergenic | 20.0% |
| !! | AATTAAAGCAAAAATGTGTT+TGG | - | chr3_1:9005698-9005717 | None:intergenic | 20.0% |
| !! | TTTCTTAACTAATATAGCAT+AGG | + | chr3_1:9005836-9005855 | Msa0347770:intron | 20.0% |
| !!! | TTTGAACTTTGTATTTTTGT+TGG | + | chr3_1:9005870-9005889 | Msa0347770:intron | 20.0% |
| !! | AACAGATTACATTTCTTATT+TGG | + | chr3_1:9005911-9005930 | Msa0347770:intron | 20.0% |
| !! | AAACAAACAAACAAAAACAA+AGG | - | chr3_1:9006059-9006078 | None:intergenic | 20.0% |
| !! | TCAATTGAATAGTTTAAACT+AGG | + | chr3_1:9006114-9006133 | Msa0347770:intron | 20.0% |
| !! | AGTTGAACAATAAATTATAG+AGG | + | chr3_1:9006341-9006360 | Msa0347770:intron | 20.0% |
| !!! | ATCTTTTAGCTAATTATTAG+CGG | - | chr3_1:9006601-9006620 | None:intergenic | 20.0% |
| !! | AAAAATCGATCTAATTCTAA+TGG | - | chr3_1:9007198-9007217 | None:intergenic | 20.0% |
| !!! | CAAAAATGTGTTTGGAATTT+TGG | - | chr3_1:9005690-9005709 | None:intergenic | 25.0% |
| ! | TTATTTGGTAAGAACTTTGA+GGG | + | chr3_1:9005926-9005945 | Msa0347770:CDS | 25.0% |
| ! | AGGCAAAATCAATTATACTT+GGG | + | chr3_1:9006406-9006425 | Msa0347770:intron | 25.0% |
| !!! | ATTTTGACATATTTGGACTT+CGG | - | chr3_1:9006437-9006456 | None:intergenic | 25.0% |
| ! | GAAAGTAATTAGTGTATGTT+TGG | - | chr3_1:9006505-9006524 | None:intergenic | 25.0% |
| !! | CAAATTTTCATTGCAATGTA+AGG | + | chr3_1:9006640-9006659 | Msa0347770:intron | 25.0% |
| ! | ATCATAGAAGAAAGAATAAC+AGG | - | chr3_1:9006778-9006797 | None:intergenic | 25.0% |
| ! | GAAGAAAATAAAAGACAATC+AGG | - | chr3_1:9006846-9006865 | None:intergenic | 25.0% |
| !! | TAAAAAGAGTGCAAATAGAT+TGG | + | chr3_1:9007140-9007159 | Msa0347770:three_prime_UTR | 25.0% |
| !!! | CAAAAATGTGTTTGGAATTT+TGG | - | chr3_1:9005690-9005709 | None:intergenic | 25.0% |
| ! | TTATTTGGTAAGAACTTTGA+GGG | + | chr3_1:9005926-9005945 | Msa0347770:CDS | 25.0% |
| ! | AGGCAAAATCAATTATACTT+GGG | + | chr3_1:9006406-9006425 | Msa0347770:intron | 25.0% |
| !!! | ATTTTGACATATTTGGACTT+CGG | - | chr3_1:9006437-9006456 | None:intergenic | 25.0% |
| ! | GAAAGTAATTAGTGTATGTT+TGG | - | chr3_1:9006505-9006524 | None:intergenic | 25.0% |
| !! | CAAATTTTCATTGCAATGTA+AGG | + | chr3_1:9006640-9006659 | Msa0347770:intron | 25.0% |
| ! | ATCATAGAAGAAAGAATAAC+AGG | - | chr3_1:9006778-9006797 | None:intergenic | 25.0% |
| ! | GAAGAAAATAAAAGACAATC+AGG | - | chr3_1:9006846-9006865 | None:intergenic | 25.0% |
| !! | TAAAAAGAGTGCAAATAGAT+TGG | + | chr3_1:9007140-9007159 | Msa0347770:three_prime_UTR | 25.0% |
| !! | AACATGTTCTGTTTTGTTGA+AGG | + | chr3_1:9005527-9005546 | Msa0347770:five_prime_UTR | 30.0% |
| !! | ACATGTTCTGTTTTGTTGAA+GGG | + | chr3_1:9005528-9005547 | Msa0347770:five_prime_UTR | 30.0% |
| CAACAAAAGTTAGTGTGAAA+TGG | - | chr3_1:9005722-9005741 | None:intergenic | 30.0% | |
| TGTGACATGAAAATGAAAAG+GGG | - | chr3_1:9005745-9005764 | None:intergenic | 30.0% | |
| CTGTGACATGAAAATGAAAA+GGG | - | chr3_1:9005746-9005765 | None:intergenic | 30.0% | |
| ACTGTGACATGAAAATGAAA+AGG | - | chr3_1:9005747-9005766 | None:intergenic | 30.0% | |
| CTTATTTGGTAAGAACTTTG+AGG | + | chr3_1:9005925-9005944 | Msa0347770:CDS | 30.0% | |
| TCTTCTTCATTCAACAGATT+TGG | + | chr3_1:9006083-9006102 | Msa0347770:intron | 30.0% | |
| CTTCTTCATTCAACAGATTT+GGG | + | chr3_1:9006084-9006103 | Msa0347770:intron | 30.0% | |
| TTCTTCATTCAACAGATTTG+GGG | + | chr3_1:9006085-9006104 | Msa0347770:intron | 30.0% | |
| AACTTGAAGTCACAATTTAG+AGG | - | chr3_1:9006372-9006391 | None:intergenic | 30.0% | |
| ! | CTTCAAGTTAGAATCAAATC+TGG | + | chr3_1:9006383-9006402 | Msa0347770:intron | 30.0% |
| GAGGCAAAATCAATTATACT+TGG | + | chr3_1:9006405-9006424 | Msa0347770:intron | 30.0% | |
| !! | GGAGTCAAAATTGTTTCTAA+CGG | - | chr3_1:9006470-9006489 | None:intergenic | 30.0% |
| CTAAAAGATAGTAATACTGC+AGG | + | chr3_1:9006612-9006631 | Msa0347770:intron | 30.0% | |
| CACATCACAATTTCAATCAA+GGG | - | chr3_1:9006677-9006696 | None:intergenic | 30.0% | |
| ! | TGCATATTCTCCATTTTCTT+AGG | + | chr3_1:9006695-9006714 | Msa0347770:intron | 30.0% |
| AAAACAAAGACTTTGCTTTG+TGG | + | chr3_1:9007083-9007102 | Msa0347770:three_prime_UTR | 30.0% | |
| ! | TCTATTTGCACTCTTTTTAC+AGG | - | chr3_1:9007139-9007158 | None:intergenic | 30.0% |
| CAACAAAACAGAACATGTTT+CGG | - | chr3_1:9005526-9005545 | None:intergenic | 30.0% | |
| !! | AACATGTTCTGTTTTGTTGA+AGG | + | chr3_1:9005527-9005546 | Msa0347770:five_prime_UTR | 30.0% |
| !! | ACATGTTCTGTTTTGTTGAA+GGG | + | chr3_1:9005528-9005547 | Msa0347770:five_prime_UTR | 30.0% |
| CAACAAAAGTTAGTGTGAAA+TGG | - | chr3_1:9005722-9005741 | None:intergenic | 30.0% | |
| TGTGACATGAAAATGAAAAG+GGG | - | chr3_1:9005745-9005764 | None:intergenic | 30.0% | |
| CTGTGACATGAAAATGAAAA+GGG | - | chr3_1:9005746-9005765 | None:intergenic | 30.0% | |
| ACTGTGACATGAAAATGAAA+AGG | - | chr3_1:9005747-9005766 | None:intergenic | 30.0% | |
| CTTATTTGGTAAGAACTTTG+AGG | + | chr3_1:9005925-9005944 | Msa0347770:CDS | 30.0% | |
| TCTTCTTCATTCAACAGATT+TGG | + | chr3_1:9006083-9006102 | Msa0347770:intron | 30.0% | |
| CTTCTTCATTCAACAGATTT+GGG | + | chr3_1:9006084-9006103 | Msa0347770:intron | 30.0% | |
| TTCTTCATTCAACAGATTTG+GGG | + | chr3_1:9006085-9006104 | Msa0347770:intron | 30.0% | |
| AACTTGAAGTCACAATTTAG+AGG | - | chr3_1:9006372-9006391 | None:intergenic | 30.0% | |
| ! | CTTCAAGTTAGAATCAAATC+TGG | + | chr3_1:9006383-9006402 | Msa0347770:intron | 30.0% |
| GAGGCAAAATCAATTATACT+TGG | + | chr3_1:9006405-9006424 | Msa0347770:intron | 30.0% | |
| !! | GGAGTCAAAATTGTTTCTAA+CGG | - | chr3_1:9006470-9006489 | None:intergenic | 30.0% |
| CTAAAAGATAGTAATACTGC+AGG | + | chr3_1:9006612-9006631 | Msa0347770:intron | 30.0% | |
| CACATCACAATTTCAATCAA+GGG | - | chr3_1:9006677-9006696 | None:intergenic | 30.0% | |
| ! | TGCATATTCTCCATTTTCTT+AGG | + | chr3_1:9006695-9006714 | Msa0347770:intron | 30.0% |
| AAAACAAAGACTTTGCTTTG+TGG | + | chr3_1:9007083-9007102 | Msa0347770:three_prime_UTR | 30.0% | |
| ! | TCTATTTGCACTCTTTTTAC+AGG | - | chr3_1:9007139-9007158 | None:intergenic | 30.0% |
| CAAATTGAATCAACACACAC+AGG | + | chr3_1:9005614-9005633 | Msa0347770:CDS | 35.0% | |
| !! | ACTAGAATAGTGGATCAAAG+AGG | + | chr3_1:9005953-9005972 | Msa0347770:CDS | 35.0% |
| !! | AGAGGTGTTAAGAAGATTTC+TGG | + | chr3_1:9005971-9005990 | Msa0347770:CDS | 35.0% |
| TGAAAGATAAACCTTCCACT+GGG | - | chr3_1:9006001-9006020 | None:intergenic | 35.0% | |
| AGGTAAATGCAAAGAAAGAG+TGG | - | chr3_1:9006039-9006058 | None:intergenic | 35.0% | |
| ! | ATGCCTTCAATCAAAAGTGT+CGG | - | chr3_1:9006206-9006225 | None:intergenic | 35.0% |
| CAAGTTAGAATCAAATCTGG+AGG | + | chr3_1:9006386-9006405 | Msa0347770:intron | 35.0% | |
| GCACATCACAATTTCAATCA+AGG | - | chr3_1:9006678-9006697 | None:intergenic | 35.0% | |
| ! | TCTCCATTTTCTTAGGTTAC+AGG | + | chr3_1:9006702-9006721 | Msa0347770:intron | 35.0% |
| ! | CTCCATTTTCTTAGGTTACA+GGG | + | chr3_1:9006703-9006722 | Msa0347770:intron | 35.0% |
| ! | TCCATTTTCTTAGGTTACAG+GGG | + | chr3_1:9006704-9006723 | Msa0347770:intron | 35.0% |
| TTTCAGCAAAACACAGATAC+TGG | - | chr3_1:9006746-9006765 | None:intergenic | 35.0% | |
| TTCTATGATGTTGTCAACAG+AGG | + | chr3_1:9006789-9006808 | Msa0347770:CDS | 35.0% | |
| TCTATGATGTTGTCAACAGA+GGG | + | chr3_1:9006790-9006809 | Msa0347770:CDS | 35.0% | |
| ! | AGACAATCAGGAAGTGTATA+TGG | - | chr3_1:9006834-9006853 | None:intergenic | 35.0% |
| CAAATTGAATCAACACACAC+AGG | + | chr3_1:9005614-9005633 | Msa0347770:CDS | 35.0% | |
| !! | ACTAGAATAGTGGATCAAAG+AGG | + | chr3_1:9005953-9005972 | Msa0347770:CDS | 35.0% |
| !! | AGAGGTGTTAAGAAGATTTC+TGG | + | chr3_1:9005971-9005990 | Msa0347770:CDS | 35.0% |
| TGAAAGATAAACCTTCCACT+GGG | - | chr3_1:9006001-9006020 | None:intergenic | 35.0% | |
| AGGTAAATGCAAAGAAAGAG+TGG | - | chr3_1:9006039-9006058 | None:intergenic | 35.0% | |
| ! | ATGCCTTCAATCAAAAGTGT+CGG | - | chr3_1:9006206-9006225 | None:intergenic | 35.0% |
| CAAGTTAGAATCAAATCTGG+AGG | + | chr3_1:9006386-9006405 | Msa0347770:intron | 35.0% | |
| GCACATCACAATTTCAATCA+AGG | - | chr3_1:9006678-9006697 | None:intergenic | 35.0% | |
| ! | TCTCCATTTTCTTAGGTTAC+AGG | + | chr3_1:9006702-9006721 | Msa0347770:intron | 35.0% |
| ! | CTCCATTTTCTTAGGTTACA+GGG | + | chr3_1:9006703-9006722 | Msa0347770:intron | 35.0% |
| ! | TCCATTTTCTTAGGTTACAG+GGG | + | chr3_1:9006704-9006723 | Msa0347770:intron | 35.0% |
| TTTCAGCAAAACACAGATAC+TGG | - | chr3_1:9006746-9006765 | None:intergenic | 35.0% | |
| TTCTATGATGTTGTCAACAG+AGG | + | chr3_1:9006789-9006808 | Msa0347770:CDS | 35.0% | |
| TCTATGATGTTGTCAACAGA+GGG | + | chr3_1:9006790-9006809 | Msa0347770:CDS | 35.0% | |
| ! | AGACAATCAGGAAGTGTATA+TGG | - | chr3_1:9006834-9006853 | None:intergenic | 35.0% |
| GAAGATGAGTGCAAGTAGTT+TGG | + | chr3_1:9005571-9005590 | Msa0347770:exon | 40.0% | |
| GAAAGATAAACCTTCCACTG+GGG | - | chr3_1:9006000-9006019 | None:intergenic | 40.0% | |
| CTGAAAGATAAACCTTCCAC+TGG | - | chr3_1:9006002-9006021 | None:intergenic | 40.0% | |
| CAGTGGAAGGTTTATCTTTC+AGG | + | chr3_1:9006000-9006019 | Msa0347770:CDS | 40.0% | |
| ATGTTTGTGTTTGACACCGA+CGG | - | chr3_1:9006245-9006264 | None:intergenic | 40.0% | |
| !!! | CAATTTTGACTCCTCCAAAG+TGG | + | chr3_1:9006477-9006496 | Msa0347770:intron | 40.0% |
| ! | TATGTTTGGTTCCACTTTGG+AGG | - | chr3_1:9006491-9006510 | None:intergenic | 40.0% |
| ! | GTGTATGTTTGGTTCCACTT+TGG | - | chr3_1:9006494-9006513 | None:intergenic | 40.0% |
| GTCTGTTGTATCTGCTTCAT+TGG | + | chr3_1:9006572-9006591 | Msa0347770:intron | 40.0% | |
| TCCCCTGTAACCTAAGAAAA+TGG | - | chr3_1:9006708-9006727 | None:intergenic | 40.0% | |
| !!! | CAGATACTGGTCTTTTTTCC+TGG | - | chr3_1:9006733-9006752 | None:intergenic | 40.0% |
| CTATGATGTTGTCAACAGAG+GGG | + | chr3_1:9006791-9006810 | Msa0347770:CDS | 40.0% | |
| TCAGCACTAGAACGATACTA+AGG | - | chr3_1:9006891-9006910 | None:intergenic | 40.0% | |
| AGGATCATATGTCGAAGTCA+AGG | + | chr3_1:9006999-9007018 | Msa0347770:CDS | 40.0% | |
| GAAGATGAGTGCAAGTAGTT+TGG | + | chr3_1:9005571-9005590 | Msa0347770:exon | 40.0% | |
| GAAAGATAAACCTTCCACTG+GGG | - | chr3_1:9006000-9006019 | None:intergenic | 40.0% | |
| CTGAAAGATAAACCTTCCAC+TGG | - | chr3_1:9006002-9006021 | None:intergenic | 40.0% | |
| CAGTGGAAGGTTTATCTTTC+AGG | + | chr3_1:9006000-9006019 | Msa0347770:CDS | 40.0% | |
| ATGTTTGTGTTTGACACCGA+CGG | - | chr3_1:9006245-9006264 | None:intergenic | 40.0% | |
| !!! | CAATTTTGACTCCTCCAAAG+TGG | + | chr3_1:9006477-9006496 | Msa0347770:intron | 40.0% |
| ! | TATGTTTGGTTCCACTTTGG+AGG | - | chr3_1:9006491-9006510 | None:intergenic | 40.0% |
| ! | GTGTATGTTTGGTTCCACTT+TGG | - | chr3_1:9006494-9006513 | None:intergenic | 40.0% |
| GTCTGTTGTATCTGCTTCAT+TGG | + | chr3_1:9006572-9006591 | Msa0347770:intron | 40.0% | |
| TCCCCTGTAACCTAAGAAAA+TGG | - | chr3_1:9006708-9006727 | None:intergenic | 40.0% | |
| !!! | CAGATACTGGTCTTTTTTCC+TGG | - | chr3_1:9006733-9006752 | None:intergenic | 40.0% |
| CTATGATGTTGTCAACAGAG+GGG | + | chr3_1:9006791-9006810 | Msa0347770:CDS | 40.0% | |
| TCAGCACTAGAACGATACTA+AGG | - | chr3_1:9006891-9006910 | None:intergenic | 40.0% | |
| AGGATCATATGTCGAAGTCA+AGG | + | chr3_1:9006999-9007018 | Msa0347770:CDS | 40.0% | |
| ! | GTTTGGTAGCAGATGAAGTG+TGG | + | chr3_1:9005588-9005607 | Msa0347770:CDS | 45.0% |
| TGAGGGAGCTACTAGAATAG+TGG | + | chr3_1:9005943-9005962 | Msa0347770:CDS | 45.0% | |
| !! | GCACCGACACTTTTGATTGA+AGG | + | chr3_1:9006200-9006219 | Msa0347770:intron | 45.0% |
| TGTTTGTGTTTGACACCGAC+GGG | - | chr3_1:9006244-9006263 | None:intergenic | 45.0% | |
| ! | CGAAGTCAAGGTATCTGATG+AGG | + | chr3_1:9007011-9007030 | Msa0347770:CDS | 45.0% |
| ! | GTTTGGTAGCAGATGAAGTG+TGG | + | chr3_1:9005588-9005607 | Msa0347770:CDS | 45.0% |
| TGAGGGAGCTACTAGAATAG+TGG | + | chr3_1:9005943-9005962 | Msa0347770:CDS | 45.0% | |
| !! | GCACCGACACTTTTGATTGA+AGG | + | chr3_1:9006200-9006219 | Msa0347770:intron | 45.0% |
| TGTTTGTGTTTGACACCGAC+GGG | - | chr3_1:9006244-9006263 | None:intergenic | 45.0% | |
| ! | CGAAGTCAAGGTATCTGATG+AGG | + | chr3_1:9007011-9007030 | Msa0347770:CDS | 45.0% |
| !! | TTTCTTAATAAAAAATAAAA+GGG | - | chr3_1:9007066-9007085 | None:intergenic | 5.0% |
| !!! | TTTTCTTAATAAAAAATAAA+AGG | - | chr3_1:9007067-9007086 | None:intergenic | 5.0% |
| !! | TTTCTTAATAAAAAATAAAA+GGG | - | chr3_1:9007066-9007085 | None:intergenic | 5.0% |
| !!! | TTTTCTTAATAAAAAATAAA+AGG | - | chr3_1:9007067-9007086 | None:intergenic | 5.0% |
| !! | AAGATTTCTGGTGACCCCAG+TGG | + | chr3_1:9005983-9006002 | Msa0347770:CDS | 50.0% |
| CTTAGGTTACAGGGGAATCC+AGG | + | chr3_1:9006712-9006731 | Msa0347770:intron | 50.0% | |
| GCAAGACTCGCTGCATCATT+AGG | + | chr3_1:9006979-9006998 | Msa0347770:CDS | 50.0% | |
| !! | AAGATTTCTGGTGACCCCAG+TGG | + | chr3_1:9005983-9006002 | Msa0347770:CDS | 50.0% |
| CTTAGGTTACAGGGGAATCC+AGG | + | chr3_1:9006712-9006731 | Msa0347770:intron | 50.0% | |
| GCAAGACTCGCTGCATCATT+AGG | + | chr3_1:9006979-9006998 | Msa0347770:CDS | 50.0% | |
| ! | TTTCTGGTGACCCCAGTGGA+AGG | + | chr3_1:9005987-9006006 | Msa0347770:CDS | 55.0% |
| TGTTTGACACCGACGGGTGT+CGG | - | chr3_1:9006238-9006257 | None:intergenic | 55.0% | |
| ! | TTTCTGGTGACCCCAGTGGA+AGG | + | chr3_1:9005987-9006006 | Msa0347770:CDS | 55.0% |
| TGTTTGACACCGACGGGTGT+CGG | - | chr3_1:9006238-9006257 | None:intergenic | 55.0% | |
| GTCGAGTGTCCGACACCCGT+CGG | + | chr3_1:9006226-9006245 | Msa0347770:intron | 65.0% | |
| GTCGAGTGTCCGACACCCGT+CGG | + | chr3_1:9006226-9006245 | Msa0347770:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 9005525 | 9007219 | 9005525 | ID=Msa0347770;Name=Msa0347770 |
| chr3_1 | mRNA | 9005525 | 9007219 | 9005525 | ID=Msa0347770-mRNA-1;Parent=Msa0347770;Name=Msa0347770-mRNA-1;_AED=0.09;_eAED=0.09;_QI=50|1|1|1|0.5|0.6|5|157|132 |
| chr3_1 | exon | 9005525 | 9005635 | 9005525 | ID=Msa0347770-mRNA-1:exon:2637;Parent=Msa0347770-mRNA-1 |
| chr3_1 | exon | 9005766 | 9005787 | 9005766 | ID=Msa0347770-mRNA-1:exon:2638;Parent=Msa0347770-mRNA-1 |
| chr3_1 | exon | 9005916 | 9006021 | 9005916 | ID=Msa0347770-mRNA-1:exon:2639;Parent=Msa0347770-mRNA-1 |
| chr3_1 | exon | 9006717 | 9006824 | 9006717 | ID=Msa0347770-mRNA-1:exon:2640;Parent=Msa0347770-mRNA-1 |
| chr3_1 | exon | 9006961 | 9007219 | 9006961 | ID=Msa0347770-mRNA-1:exon:2641;Parent=Msa0347770-mRNA-1 |
| chr3_1 | five_prime_UTR | 9005525 | 9005574 | 9005525 | ID=Msa0347770-mRNA-1:five_prime_utr;Parent=Msa0347770-mRNA-1 |
| chr3_1 | CDS | 9005575 | 9005635 | 9005575 | ID=Msa0347770-mRNA-1:cds;Parent=Msa0347770-mRNA-1 |
| chr3_1 | CDS | 9005766 | 9005787 | 9005766 | ID=Msa0347770-mRNA-1:cds;Parent=Msa0347770-mRNA-1 |
| chr3_1 | CDS | 9005916 | 9006021 | 9005916 | ID=Msa0347770-mRNA-1:cds;Parent=Msa0347770-mRNA-1 |
| chr3_1 | CDS | 9006717 | 9006824 | 9006717 | ID=Msa0347770-mRNA-1:cds;Parent=Msa0347770-mRNA-1 |
| chr3_1 | CDS | 9006961 | 9007062 | 9006961 | ID=Msa0347770-mRNA-1:cds;Parent=Msa0347770-mRNA-1 |
| chr3_1 | three_prime_UTR | 9007063 | 9007219 | 9007063 | ID=Msa0347770-mRNA-1:three_prime_utr;Parent=Msa0347770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
