Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439200 | KEH21546.1 | 91.398 | 93 | 8 | 0 | 1 | 93 | 18 | 110 | 8.18e-54 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439200 | A0A072TWH2 | 91.398 | 93 | 8 | 0 | 1 | 93 | 18 | 110 | 3.90e-54 | 173 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006380 | Msa0439200 | 0.817461 | 3.257907e-52 | -8.615850e-47 |
| Msa0015300 | Msa0439200 | 0.801526 | 8.636172e-49 | -8.615850e-47 |
| Msa0017510 | Msa0439200 | 0.819631 | 1.049558e-52 | -8.615850e-47 |
| Msa0025730 | Msa0439200 | 0.813229 | 2.844412e-51 | -8.615850e-47 |
| Msa0037700 | Msa0439200 | 0.819403 | 1.182978e-52 | -8.615850e-47 |
| Msa0043980 | Msa0439200 | 0.814048 | 1.878997e-51 | -8.615850e-47 |
| Msa0074700 | Msa0439200 | 0.820461 | 6.776462e-53 | -8.615850e-47 |
| Msa0086650 | Msa0439200 | 0.833657 | 4.700934e-56 | -8.615850e-47 |
| Msa0090360 | Msa0439200 | 0.811477 | 6.865752e-51 | -8.615850e-47 |
| Msa0101700 | Msa0439200 | 0.801872 | 7.335758e-49 | -8.615850e-47 |
| Msa0113750 | Msa0439200 | 0.804079 | 2.566433e-49 | -8.615850e-47 |
| Msa0131600 | Msa0439200 | 0.809750 | 1.621827e-50 | -8.615850e-47 |
| Msa0133130 | Msa0439200 | 0.827497 | 1.513893e-54 | -8.615850e-47 |
| Msa0137840 | Msa0439200 | 0.800997 | 1.108457e-48 | -8.615850e-47 |
| Msa0140650 | Msa0439200 | 0.800467 | 1.421981e-48 | -8.615850e-47 |
| Msa0140820 | Msa0439200 | 0.805384 | 1.369898e-49 | -8.615850e-47 |
| Msa0145440 | Msa0439200 | 0.827933 | 1.189986e-54 | -8.615850e-47 |
| Msa0149340 | Msa0439200 | 0.808334 | 3.260160e-50 | -8.615850e-47 |
| Msa0150820 | Msa0439200 | 0.811054 | 8.479521e-51 | -8.615850e-47 |
| Msa0157100 | Msa0439200 | 0.845978 | 2.897682e-59 | -8.615850e-47 |
| Msa0157290 | Msa0439200 | 0.819472 | 1.140811e-52 | -8.615850e-47 |
| Msa0173990 | Msa0439200 | 0.801803 | 7.577331e-49 | -8.615850e-47 |
| Msa0184040 | Msa0439200 | 0.805872 | 1.082148e-49 | -8.615850e-47 |
| Msa0184780 | Msa0439200 | 0.804996 | 1.651929e-49 | -8.615850e-47 |
| Msa0184960 | Msa0439200 | 0.805203 | 1.494791e-49 | -8.615850e-47 |
| Msa0189290 | Msa0439200 | 0.819177 | 1.331620e-52 | -8.615850e-47 |
| Msa0191050 | Msa0439200 | 0.826013 | 3.423385e-54 | -8.615850e-47 |
| Msa0194950 | Msa0439200 | -0.834735 | 2.524301e-56 | -8.615850e-47 |
| Msa0200260 | Msa0439200 | 0.801866 | 7.356595e-49 | -8.615850e-47 |
| Msa0220580 | Msa0439200 | 0.806829 | 6.802509e-50 | -8.615850e-47 |
| Msa0220720 | Msa0439200 | 0.807278 | 5.464335e-50 | -8.615850e-47 |
| Msa0222620 | Msa0439200 | 0.804598 | 2.000760e-49 | -8.615850e-47 |
| Msa0231650 | Msa0439200 | 0.833025 | 6.759270e-56 | -8.615850e-47 |
| Msa0233350 | Msa0439200 | 0.827226 | 1.758947e-54 | -8.615850e-47 |
| Msa0236960 | Msa0439200 | -0.806707 | 7.219075e-50 | -8.615850e-47 |
| Msa0366890 | Msa0439200 | 0.820868 | 5.462498e-53 | -8.615850e-47 |
| Msa0376300 | Msa0439200 | 0.811167 | 8.015567e-51 | -8.615850e-47 |
| Msa0376310 | Msa0439200 | 0.823811 | 1.132758e-53 | -8.615850e-47 |
| Msa0379640 | Msa0439200 | 0.816735 | 4.745097e-52 | -8.615850e-47 |
| Msa0385580 | Msa0439200 | 0.837195 | 5.997431e-57 | -8.615850e-47 |
| Msa0395820 | Msa0439200 | 0.817738 | 2.822176e-52 | -8.615850e-47 |
| Msa0416300 | Msa0439200 | 0.810171 | 1.316040e-50 | -8.615850e-47 |
| Msa0428930 | Msa0439200 | 0.800277 | 1.553868e-48 | -8.615850e-47 |
| Msa0433640 | Msa0439200 | 0.821420 | 4.077110e-53 | -8.615850e-47 |
| Msa0436490 | Msa0439200 | -0.819566 | 1.085853e-52 | -8.615850e-47 |
| Msa0439200 | Msa0468330 | 0.801793 | 7.615137e-49 | -8.615850e-47 |
| Msa0439200 | Msa0469990 | 0.839368 | 1.652497e-57 | -8.615850e-47 |
| Msa0439200 | Msa0471440 | 0.812893 | 3.371262e-51 | -8.615850e-47 |
| Msa0439200 | Msa0477080 | 0.817164 | 3.800203e-52 | -8.615850e-47 |
| Msa0439200 | Msa0479660 | 0.805282 | 1.439194e-49 | -8.615850e-47 |
| Msa0439200 | Msa0479970 | 0.832880 | 7.342732e-56 | -8.615850e-47 |
| Msa0439200 | Msa0481530 | 0.811619 | 6.393769e-51 | -8.615850e-47 |
| Msa0439200 | Msa0493480 | 0.849195 | 3.778967e-60 | -8.615850e-47 |
| Msa0439200 | Msa0493630 | 0.810915 | 9.088965e-51 | -8.615850e-47 |
| Msa0439200 | Msa0498650 | 0.813080 | 3.066974e-51 | -8.615850e-47 |
| Msa0439200 | Msa0518390 | 0.806498 | 7.991212e-50 | -8.615850e-47 |
| Msa0439200 | Msa0521500 | 0.800909 | 1.154919e-48 | -8.615850e-47 |
| Msa0439200 | Msa0521540 | 0.817096 | 3.935842e-52 | -8.615850e-47 |
| Msa0439200 | Msa0523270 | 0.800703 | 1.272864e-48 | -8.615850e-47 |
| Msa0439200 | Msa0529680 | 0.804536 | 2.061273e-49 | -8.615850e-47 |
| Msa0439200 | Msa0545070 | 0.808308 | 3.301799e-50 | -8.615850e-47 |
| Msa0439200 | Msa0548240 | 0.836183 | 1.086344e-56 | -8.615850e-47 |
| Msa0439200 | Msa0551890 | 0.801188 | 1.012787e-48 | -8.615850e-47 |
| Msa0439200 | Msa0589190 | 0.802348 | 5.855905e-49 | -8.615850e-47 |
| Msa0439200 | Msa0590990 | 0.824066 | 9.868696e-54 | -8.615850e-47 |
| Msa0439200 | Msa0597330 | 0.822373 | 2.451955e-53 | -8.615850e-47 |
| Msa0439200 | Msa0602390 | 0.807045 | 6.121435e-50 | -8.615850e-47 |
| Msa0439200 | Msa0607050 | 0.858671 | 7.017784e-63 | -8.615850e-47 |
| Msa0439200 | Msa0610430 | 0.818704 | 1.706211e-52 | -8.615850e-47 |
| Msa0439200 | Msa0615710 | 0.806477 | 8.069812e-50 | -8.615850e-47 |
| Msa0439200 | Msa0647500 | 0.821963 | 3.052595e-53 | -8.615850e-47 |
| Msa0439200 | Msa0649490 | 0.842075 | 3.227444e-58 | -8.615850e-47 |
| Msa0439200 | Msa0656530 | 0.801823 | 7.508374e-49 | -8.615850e-47 |
| Msa0439200 | Msa0657580 | 0.817716 | 2.853998e-52 | -8.615850e-47 |
| Msa0439200 | Msa0657970 | 0.819713 | 1.005084e-52 | -8.615850e-47 |
| Msa0439200 | Msa0662500 | 0.809693 | 1.668083e-50 | -8.615850e-47 |
| Msa0439200 | Msa0663390 | 0.813213 | 2.868718e-51 | -8.615850e-47 |
| Msa0439200 | Msa0673460 | 0.812019 | 5.233265e-51 | -8.615850e-47 |
| Msa0439200 | Msa0689260 | 0.808319 | 3.283224e-50 | -8.615850e-47 |
| Msa0439200 | Msa0690150 | 0.858639 | 7.175966e-63 | -8.615850e-47 |
| Msa0439200 | Msa0690750 | 0.814882 | 1.228500e-51 | -8.615850e-47 |
| Msa0439200 | Msa0692830 | 0.801764 | 7.720830e-49 | -8.615850e-47 |
| Msa0439200 | Msa0692840 | 0.809026 | 2.318859e-50 | -8.615850e-47 |
| Msa0439200 | Msa0692950 | 0.807168 | 5.765591e-50 | -8.615850e-47 |
| Msa0439200 | Msa0709400 | 0.833766 | 4.415977e-56 | -8.615850e-47 |
| Msa0439200 | Msa0709500 | 0.833893 | 4.105316e-56 | -8.615850e-47 |
| Msa0439200 | Msa0711780 | 0.818716 | 1.695349e-52 | -8.615850e-47 |
| Msa0439200 | Msa0715700 | 0.807667 | 4.518603e-50 | -8.615850e-47 |
| Msa0439200 | Msa0720820 | 0.814839 | 1.255755e-51 | -8.615850e-47 |
| Msa0439200 | Msa0742380 | 0.808743 | 2.665401e-50 | -8.615850e-47 |
| Msa0439200 | Msa0743720 | 0.803658 | 3.139026e-49 | -8.615850e-47 |
| Msa0439200 | Msa0750880 | 0.829253 | 5.709138e-55 | -8.615850e-47 |
| Msa0439200 | Msa0761940 | 0.814312 | 1.642893e-51 | -8.615850e-47 |
| Msa0439200 | Msa0765380 | 0.804044 | 2.609551e-49 | -8.615850e-47 |
| Msa0439200 | Msa0771720 | 0.835766 | 1.386467e-56 | -8.615850e-47 |
| Msa0439200 | Msa0784200 | 0.808456 | 3.069279e-50 | -8.615850e-47 |
| Msa0439200 | Msa0790660 | -0.805938 | 1.048379e-49 | -8.615850e-47 |
| Msa0439200 | Msa0790850 | 0.824371 | 8.369419e-54 | -8.615850e-47 |
| Msa0439200 | Msa0794670 | 0.828140 | 1.060601e-54 | -8.615850e-47 |
| Msa0439200 | Msa0801110 | 0.819799 | 9.604933e-53 | -8.615850e-47 |
| Msa0439200 | Msa0803890 | 0.834924 | 2.262437e-56 | -8.615850e-47 |
| Msa0439200 | Msa0806790 | 0.802868 | 4.572808e-49 | -8.615850e-47 |
| Msa0439200 | Msa0808080 | 0.820815 | 5.619031e-53 | -8.615850e-47 |
| Msa0439200 | Msa0808270 | 0.809509 | 1.827011e-50 | -8.615850e-47 |
| Msa0439200 | Msa0818310 | 0.814159 | 1.775525e-51 | -8.615850e-47 |
| Msa0439200 | Msa0820770 | 0.804227 | 2.389813e-49 | -8.615850e-47 |
| Msa0439200 | Msa0820850 | 0.800349 | 1.502722e-48 | -8.615850e-47 |
| Msa0439200 | Msa0841940 | 0.818203 | 2.215817e-52 | -8.615850e-47 |
| Msa0439200 | Msa0842830 | 0.801982 | 6.963970e-49 | -8.615850e-47 |
| Msa0439200 | Msa0849030 | 0.802589 | 5.222203e-49 | -8.615850e-47 |
| Msa0439200 | Msa0858770 | 0.816463 | 5.458335e-52 | -8.615850e-47 |
| Msa0439200 | Msa0861130 | 0.800231 | 1.588166e-48 | -8.615850e-47 |
| Msa0439200 | Msa0866550 | 0.824020 | 1.012143e-53 | -8.615850e-47 |
| Msa0439200 | Msa0867220 | 0.802436 | 5.615587e-49 | -8.615850e-47 |
| Msa0439200 | Msa0871270 | 0.821308 | 4.325169e-53 | -8.615850e-47 |
| Msa0439200 | Msa0876200 | 0.820590 | 6.327990e-53 | -8.615850e-47 |
| Msa0439200 | Msa0877410 | 0.800530 | 1.380558e-48 | -8.615850e-47 |
| Msa0439200 | Msa0880140 | 0.814096 | 1.833234e-51 | -8.615850e-47 |
| Msa0439200 | Msa0884410 | -0.809791 | 1.589353e-50 | -8.615850e-47 |
| Msa0439200 | Msa0902760 | 0.830221 | 3.317279e-55 | -8.615850e-47 |
| Msa0439200 | Msa0938220 | 0.805301 | 1.425771e-49 | -8.615850e-47 |
| Msa0439200 | Msa0947660 | 0.813360 | 2.662261e-51 | -8.615850e-47 |
| Msa0439200 | Msa0963270 | 0.815709 | 8.045458e-52 | -8.615850e-47 |
| Msa0439200 | Msa0966400 | 0.805588 | 1.241872e-49 | -8.615850e-47 |
| Msa0439200 | Msa0968590 | 0.831173 | 1.939643e-55 | -8.615850e-47 |
| Msa0439200 | Msa0968680 | 0.817380 | 3.397434e-52 | -8.615850e-47 |
| Msa0439200 | Msa0974070 | 0.803207 | 3.891410e-49 | -8.615850e-47 |
| Msa0439200 | Msa0975340 | 0.826857 | 2.154995e-54 | -8.615850e-47 |
| Msa0439200 | Msa0993330 | 0.807858 | 4.116192e-50 | -8.615850e-47 |
| Msa0439200 | Msa1012320 | 0.971689 | 1.464960e-133 | -8.615850e-47 |
| Msa0439200 | Msa1012370 | 0.856001 | 4.320037e-62 | -8.615850e-47 |
| Msa0439200 | Msa1013400 | 0.834604 | 2.723038e-56 | -8.615850e-47 |
| Msa0439200 | Msa1014540 | 0.802864 | 4.581404e-49 | -8.615850e-47 |
| Msa0439200 | Msa1023920 | 0.818164 | 2.260836e-52 | -8.615850e-47 |
| Msa0439200 | Msa1040400 | 0.835036 | 2.119900e-56 | -8.615850e-47 |
| Msa0439200 | Msa1046020 | 0.826102 | 3.262109e-54 | -8.615850e-47 |
| Msa0439200 | Msa1046060 | 0.823044 | 1.711767e-53 | -8.615850e-47 |
| Msa0439200 | Msa1047440 | 0.832025 | 1.196202e-55 | -8.615850e-47 |
| Msa0439200 | Msa1063510 | 0.812097 | 5.032113e-51 | -8.615850e-47 |
| Msa0439200 | Msa1081360 | -0.830417 | 2.971322e-55 | -8.615850e-47 |
| Msa0439200 | Msa1083150 | 0.804444 | 2.154275e-49 | -8.615850e-47 |
| Msa0439200 | Msa1085260 | 0.805217 | 1.485158e-49 | -8.615850e-47 |
| Msa0439200 | Msa1085800 | 0.839569 | 1.465498e-57 | -8.615850e-47 |
| Msa0439200 | Msa1091530 | 0.823727 | 1.185418e-53 | -8.615850e-47 |
| Msa0439200 | Msa1093530 | 0.830885 | 2.282977e-55 | -8.615850e-47 |
| Msa0439200 | Msa1107900 | 0.821962 | 3.055182e-53 | -8.615850e-47 |
| Msa0439200 | Msa1109680 | 0.817378 | 3.402549e-52 | -8.615850e-47 |
| Msa0439200 | Msa1124960 | 0.822128 | 2.794880e-53 | -8.615850e-47 |
| Msa0439200 | Msa1125760 | 0.838722 | 2.428814e-57 | -8.615850e-47 |
| Msa0439200 | Msa1127890 | 0.808982 | 2.369409e-50 | -8.615850e-47 |
| Msa0439200 | Msa1131220 | 0.803717 | 3.051779e-49 | -8.615850e-47 |
| Msa0439200 | Msa1147900 | 0.803328 | 3.673069e-49 | -8.615850e-47 |
| Msa0439200 | Msa1147970 | 0.802564 | 5.285373e-49 | -8.615850e-47 |
| Msa0439200 | Msa1151720 | 0.804115 | 2.522474e-49 | -8.615850e-47 |
| Msa0439200 | Msa1165940 | 0.818271 | 2.138873e-52 | -8.615850e-47 |
| Msa0439200 | Msa1170410 | 0.819984 | 8.714237e-53 | -8.615850e-47 |
| Msa0439200 | Msa1171360 | 0.830900 | 2.263574e-55 | -8.615850e-47 |
| Msa0439200 | Msa1172670 | 0.824999 | 5.953153e-54 | -8.615850e-47 |
| Msa0439200 | Msa1174040 | 0.812014 | 5.247384e-51 | -8.615850e-47 |
| Msa0439200 | Msa1179460 | 0.803232 | 3.845724e-49 | -8.615850e-47 |
| Msa0439200 | Msa1187840 | 0.801391 | 9.207715e-49 | -8.615850e-47 |
| Msa0439200 | Msa1194030 | 0.805677 | 1.189185e-49 | -8.615850e-47 |
| Msa0439200 | Msa1199220 | 0.801672 | 8.061014e-49 | -8.615850e-47 |
| Msa0439200 | Msa1207270 | 0.823296 | 1.494987e-53 | -8.615850e-47 |
| Msa0439200 | Msa1209010 | 0.804437 | 2.160796e-49 | -8.615850e-47 |
| Msa0439200 | Msa1211890 | 0.804106 | 2.532386e-49 | -8.615850e-47 |
| Msa0439200 | Msa1214020 | 0.801107 | 1.052422e-48 | -8.615850e-47 |
| Msa0439200 | Msa1214890 | 0.810007 | 1.428021e-50 | -8.615850e-47 |
| Msa0439200 | Msa1218600 | 0.834951 | 2.227198e-56 | -8.615850e-47 |
| Msa0439200 | Msa1227400 | 0.802772 | 4.787503e-49 | -8.615850e-47 |
| Msa0439200 | Msa1233890 | 0.804183 | 2.440740e-49 | -8.615850e-47 |
| Msa0439200 | Msa1239910 | 0.832265 | 1.042996e-55 | -8.615850e-47 |
| Msa0439200 | Msa1244600 | 0.828412 | 9.123040e-55 | -8.615850e-47 |
| Msa0439200 | Msa1244610 | 0.811241 | 7.725988e-51 | -8.615850e-47 |
| Msa0439200 | Msa1247250 | 0.819308 | 1.243115e-52 | -8.615850e-47 |
| Msa0439200 | Msa1253020 | 0.830597 | 2.685088e-55 | -8.615850e-47 |
| Msa0439200 | Msa1267430 | 0.855113 | 7.842181e-62 | -8.615850e-47 |
| Msa0439200 | Msa1279400 | 0.807046 | 6.119717e-50 | -8.615850e-47 |
| Msa0439200 | Msa1283170 | 0.804879 | 1.748007e-49 | -8.615850e-47 |
| Msa0439200 | Msa1293280 | 0.812111 | 4.997960e-51 | -8.615850e-47 |
| Msa0439200 | Msa1293510 | 0.817568 | 3.081808e-52 | -8.615850e-47 |
| Msa0439200 | Msa1294480 | 0.802222 | 6.214969e-49 | -8.615850e-47 |
| Msa0439200 | Msa1303250 | 0.814393 | 1.576502e-51 | -8.615850e-47 |
| Msa0439200 | Msa1305340 | 0.819661 | 1.032855e-52 | -8.615850e-47 |
| Msa0439200 | Msa1305660 | 0.831309 | 1.795905e-55 | -8.615850e-47 |
| Msa0439200 | Msa1305710 | 0.810019 | 1.419052e-50 | -8.615850e-47 |
| Msa0439200 | Msa1336710 | 0.802208 | 6.256742e-49 | -8.615850e-47 |
| Msa0439200 | Msa1342900 | 0.814471 | 1.514623e-51 | -8.615850e-47 |
| Msa0439200 | Msa1353060 | 0.825534 | 4.449554e-54 | -8.615850e-47 |
| Msa0439200 | Msa1358250 | 0.806866 | 6.679503e-50 | -8.615850e-47 |
| Msa0439200 | Msa1359040 | 0.816169 | 6.351352e-52 | -8.615850e-47 |
| Msa0439200 | Msa1361100 | 0.809799 | 1.582549e-50 | -8.615850e-47 |
| Msa0439200 | Msa1364730 | 0.842359 | 2.712825e-58 | -8.615850e-47 |
| Msa0439200 | Msa1374550 | 0.806453 | 8.164510e-50 | -8.615850e-47 |
| Msa0439200 | Msa1386780 | 0.832201 | 1.081874e-55 | -8.615850e-47 |
| Msa0439200 | Msa1392780 | 0.800973 | 1.120989e-48 | -8.615850e-47 |
| Msa0439200 | Msa1402420 | -0.814059 | 1.868563e-51 | -8.615850e-47 |
| Msa0439200 | Msa1411020 | 0.800681 | 1.286073e-48 | -8.615850e-47 |
| Msa0439200 | Msa1417200 | 0.810445 | 1.148689e-50 | -8.615850e-47 |
| Msa0439200 | Msa1424450 | 0.818536 | 1.862291e-52 | -8.615850e-47 |
| Msa0439200 | Msa1426030 | 0.800594 | 1.339248e-48 | -8.615850e-47 |
| Msa0439200 | Msa1432420 | 0.838751 | 2.387080e-57 | -8.615850e-47 |
| Msa0439200 | Msa1433390 | 0.809068 | 2.271118e-50 | -8.615850e-47 |
| Msa0439200 | Msa1434350 | 0.801060 | 1.075767e-48 | -8.615850e-47 |
| Msa0439200 | Msa1434420 | -0.811876 | 5.623246e-51 | -8.615850e-47 |
| Msa0439200 | Msa1439320 | 0.802052 | 6.737575e-49 | -8.615850e-47 |
| Msa0439200 | Msa1440000 | 0.817174 | 3.781306e-52 | -8.615850e-47 |
| Msa0439200 | Msa1451160 | 0.809951 | 1.468178e-50 | -8.615850e-47 |
| Msa0439200 | Msa1451550 | 0.811297 | 7.511634e-51 | -8.615850e-47 |
| Msa0439200 | Msa1451560 | 0.805065 | 1.597601e-49 | -8.615850e-47 |
| Msa0439200 | Msa1452240 | 0.830714 | 2.514028e-55 | -8.615850e-47 |
| Msa0439200 | Msa1453080 | 0.802960 | 4.377096e-49 | -8.615850e-47 |
| Msa0439200 | Msa1457910 | 0.830232 | 3.297943e-55 | -8.615850e-47 |
| Msa0439200 | Msa1461280 | 0.810899 | 9.161668e-51 | -8.615850e-47 |
| Msa0439200 | Msa1466540 | 0.806822 | 6.824469e-50 | -8.615850e-47 |
| Msa0243100 | Msa0439200 | 0.818705 | 1.704683e-52 | -8.615850e-47 |
| Msa0257460 | Msa0439200 | 0.806131 | 9.544974e-50 | -8.615850e-47 |
| Msa0260680 | Msa0439200 | 0.804741 | 1.867893e-49 | -8.615850e-47 |
| Msa0262310 | Msa0439200 | 0.800490 | 1.406723e-48 | -8.615850e-47 |
| Msa0264150 | Msa0439200 | 0.830103 | 3.545163e-55 | -8.615850e-47 |
| Msa0270320 | Msa0439200 | 0.804673 | 1.929215e-49 | -8.615850e-47 |
| Msa0273900 | Msa0439200 | 0.808260 | 3.380589e-50 | -8.615850e-47 |
| Msa0280090 | Msa0439200 | 0.826263 | 2.986233e-54 | -8.615850e-47 |
| Msa0287410 | Msa0439200 | 0.805449 | 1.328013e-49 | -8.615850e-47 |
| Msa0287650 | Msa0439200 | 0.817504 | 3.186089e-52 | -8.615850e-47 |
| Msa0291500 | Msa0439200 | 0.827543 | 1.476184e-54 | -8.615850e-47 |
| Msa0296740 | Msa0439200 | 0.811049 | 8.501032e-51 | -8.615850e-47 |
| Msa0298700 | Msa0439200 | 0.803741 | 3.016913e-49 | -8.615850e-47 |
| Msa0299870 | Msa0439200 | 0.802262 | 6.098978e-49 | -8.615850e-47 |
| Msa0309770 | Msa0439200 | 0.804746 | 1.862837e-49 | -8.615850e-47 |
| Msa0312650 | Msa0439200 | 0.821133 | 4.747951e-53 | -8.615850e-47 |
| Msa0315440 | Msa0439200 | -0.826130 | 3.211883e-54 | -8.615850e-47 |
| Msa0329350 | Msa0439200 | 0.816569 | 5.169722e-52 | -8.615850e-47 |
| Msa0334550 | Msa0439200 | 0.808757 | 2.647288e-50 | -8.615850e-47 |
| Msa0336420 | Msa0439200 | 0.817520 | 3.159822e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439200 | MtrunA17_Chr7g0215471 | 91.398 | 93 | 8 | 0 | 1 | 93 | 5 | 97 | 8.96e-58 | 172 |
| Msa0439200 | MtrunA17_Chr7g0215501 | 81.429 | 70 | 13 | 0 | 1 | 70 | 1 | 70 | 7.76e-33 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439200 | AT1G47820.1 | 55.714 | 70 | 30 | 1 | 1 | 69 | 1 | 70 | 4.91e-21 | 80.1 |
| Msa0439200 | AT1G47820.2 | 55.714 | 70 | 30 | 1 | 1 | 69 | 1 | 70 | 4.91e-21 | 80.1 |
Find 27 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGTTTATTGAAGAATTTA+AGG | 0.202532 | 3_3:-4693686 | Msa0439200:three_prime_UTR |
| AGAATTTAAGGAATATTATT+TGG | 0.230448 | 3_3:-4693674 | Msa0439200:three_prime_UTR |
| CATACCAATATTTAACTTCA+TGG | 0.252212 | 3_3:-4693639 | Msa0439200:three_prime_UTR |
| GCTCAAACACGACAGGATTT+AGG | 0.308005 | 3_3:+4696704 | None:intergenic |
| ATTTCCATGAAGTTAAATAT+TGG | 0.313903 | 3_3:+4693635 | None:intergenic |
| TCTCTCTCTCTGTGTCAATA+AGG | 0.365835 | 3_3:-4696660 | Msa0439200:intron |
| CACAGAGTCATATTCTGTTC+AGG | 0.414511 | 3_3:-4693974 | Msa0439200:CDS |
| ATGAGTATATTGCCGCAAAA+CGG | 0.418613 | 3_3:-4696729 | None:intergenic |
| TGAGTATATTGCCGCAAAAC+GGG | 0.420612 | 3_3:-4696728 | None:intergenic |
| GTGGCATTCACCTGAGGTCT+AGG | 0.432602 | 3_3:+4694009 | None:intergenic |
| ACAAAGCATGGCCGTATTGA+AGG | 0.443308 | 3_3:-4693905 | Msa0439200:CDS |
| TGTTATGAAATCCTTCAATA+CGG | 0.467267 | 3_3:+4693894 | None:intergenic |
| TATTCTGTTCAGGCAATCAA+TGG | 0.473465 | 3_3:-4693964 | Msa0439200:CDS |
| TGACGATGATGTTGCTAAGA+AGG | 0.498240 | 3_3:-4693815 | Msa0439200:CDS |
| TGCAGTGCTTCCTAGACCTC+AGG | 0.506425 | 3_3:-4694019 | Msa0439200:CDS |
| ATTTAAGGAATATTATTTGG+TGG | 0.519709 | 3_3:-4693671 | Msa0439200:three_prime_UTR |
| TGCTAAGAAGGCTCAAGTAA+AGG | 0.526582 | 3_3:-4693803 | Msa0439200:CDS |
| GAAGCTTCTAACGACTCGTC+TGG | 0.528210 | 3_3:+4693847 | None:intergenic |
| CGAGTCGTTAGAAGCTTCCT+CGG | 0.555746 | 3_3:-4693842 | Msa0439200:CDS |
| GACTCGTCTGGAACATCTTG+AGG | 0.569302 | 3_3:+4693859 | None:intergenic |
| TGAAGCAGCTCAAACACGAC+AGG | 0.596549 | 3_3:+4696697 | None:intergenic |
| TAACATGAAAGAACAAAGCA+TGG | 0.616394 | 3_3:-4693917 | Msa0439200:CDS |
| GTGAATGCCACATTTCGTCT+CGG | 0.619096 | 3_3:-4693997 | Msa0439200:CDS |
| AACATCATCGTCATCTTCCG+AGG | 0.626307 | 3_3:+4693825 | None:intergenic |
| CGAAATGTGGCATTCACCTG+AGG | 0.643629 | 3_3:+4694003 | None:intergenic |
| CTCTGTGCCGAGACGAAATG+TGG | 0.646370 | 3_3:+4693990 | None:intergenic |
| ATATGTCTAAAATGTATGAG+TGG | 0.669924 | 3_3:-4693749 | Msa0439200:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATACTATTCTAAATA+AGG | + | chr3_3:4694603-4694622 | None:intergenic | 10.0% |
| !! | ATATTTCAAAATATATCTAA+AGG | + | chr3_3:4696149-4696168 | None:intergenic | 10.0% |
| !! | ATAAACTGAAAATAGTTTAT+GGG | + | chr3_3:4694012-4694031 | None:intergenic | 15.0% |
| !! | AATAAACTGAAAATAGTTTA+TGG | + | chr3_3:4694013-4694032 | None:intergenic | 15.0% |
| !!! | TATTTTCAGTTTATTTTCAT+AGG | - | chr3_3:4694018-4694037 | Msa0439200:CDS | 15.0% |
| !! | TAGATAAATAGTTAATTCTT+TGG | - | chr3_3:4694263-4694282 | Msa0439200:intron | 15.0% |
| !!! | ACTTATAACTAATATTTTCT+TGG | - | chr3_3:4694642-4694661 | Msa0439200:intron | 15.0% |
| !!! | CTTATAACTAATATTTTCTT+GGG | - | chr3_3:4694643-4694662 | Msa0439200:intron | 15.0% |
| !!! | TGTTGATGAAAAATTTTATA+GGG | + | chr3_3:4694744-4694763 | None:intergenic | 15.0% |
| !!! | ATGTTGATGAAAAATTTTAT+AGG | + | chr3_3:4694745-4694764 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGTGACATATAAT+GGG | + | chr3_3:4695180-4695199 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGTGACATATAA+TGG | + | chr3_3:4695181-4695200 | None:intergenic | 15.0% |
| !! | ATAAAAAGCAATATATAAGA+GGG | + | chr3_3:4695242-4695261 | None:intergenic | 15.0% |
| !! | AATAAAAAGCAATATATAAG+AGG | + | chr3_3:4695243-4695262 | None:intergenic | 15.0% |
| !! | TAAAAAAAATTACTTAACAC+AGG | + | chr3_3:4695636-4695655 | None:intergenic | 15.0% |
| !!! | TGTGTTAAGTAATTTTTTTT+AGG | - | chr3_3:4695635-4695654 | Msa0439200:intron | 15.0% |
| !! | TTAGTTTATTGAAGAATTTA+AGG | - | chr3_3:4696654-4696673 | Msa0439200:intron | 15.0% |
| !! | AGAATTTAAGGAATATTATT+TGG | - | chr3_3:4696666-4696685 | Msa0439200:five_prime_UTR | 15.0% |
| !!! | TTAGAATAGTATTTTTTGAG+AGG | - | chr3_3:4694606-4694625 | Msa0439200:intron | 20.0% |
| !! | CAAAATTCTGAATATTCATA+GGG | + | chr3_3:4694686-4694705 | None:intergenic | 20.0% |
| !! | ACAAAATTCTGAATATTCAT+AGG | + | chr3_3:4694687-4694706 | None:intergenic | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr3_3:4694873-4694892 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr3_3:4694872-4694891 | None:intergenic | 20.0% |
| !!! | AAAATTTCCATCAACATTTT+TGG | - | chr3_3:4694812-4694831 | Msa0439200:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+TGG | - | chr3_3:4694873-4694892 | Msa0439200:intron | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr3_3:4694903-4694922 | Msa0439200:intron | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr3_3:4694904-4694923 | Msa0439200:intron | 20.0% |
| !!! | TTAATTAACCCTATTTTCTT+TGG | - | chr3_3:4694936-4694955 | Msa0439200:intron | 20.0% |
| !! | TGGTTTGAGAATATTATAAT+AGG | - | chr3_3:4694956-4694975 | Msa0439200:intron | 20.0% |
| !! | GGTTTGAGAATATTATAATA+GGG | - | chr3_3:4694957-4694976 | Msa0439200:intron | 20.0% |
| !! | CAAAAAAAAAAACAGAAAGA+TGG | - | chr3_3:4695191-4695210 | Msa0439200:intron | 20.0% |
| !! | TGTGTATTGAATATTATTGT+TGG | - | chr3_3:4695520-4695539 | Msa0439200:intron | 20.0% |
| !! | TCTCATCTCTTTATAATATA+GGG | + | chr3_3:4695867-4695886 | None:intergenic | 20.0% |
| !! | TTCTCATCTCTTTATAATAT+AGG | + | chr3_3:4695868-4695887 | None:intergenic | 20.0% |
| !! | TATATTATAAAGAGATGAGA+AGG | - | chr3_3:4695867-4695886 | Msa0439200:intron | 20.0% |
| !! | ATTTAAGGAATATTATTTGG+TGG | - | chr3_3:4696669-4696688 | Msa0439200:five_prime_UTR | 20.0% |
| !! | ATTTCCATGAAGTTAAATAT+TGG | + | chr3_3:4696708-4696727 | None:intergenic | 20.0% |
| !! | AAGAAAATCGAAATGTTTTG+CGG | + | chr3_3:4693710-4693729 | None:intergenic | 25.0% |
| ! | AATAGTTAATTCTTTGGACT+CGG | - | chr3_3:4694269-4694288 | Msa0439200:intron | 25.0% |
| !!! | AATAGTATTTTTTGAGAGGA+TGG | - | chr3_3:4694610-4694629 | Msa0439200:intron | 25.0% |
| !! | GCTGATGGAAAATTTTTATA+GGG | + | chr3_3:4694775-4694794 | None:intergenic | 25.0% |
| !! | TGCTGATGGAAAATTTTTAT+AGG | + | chr3_3:4694776-4694795 | None:intergenic | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr3_3:4694839-4694858 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr3_3:4694840-4694859 | None:intergenic | 25.0% |
| ! | TTCTCAAACCAAAGAAAATA+GGG | + | chr3_3:4694947-4694966 | None:intergenic | 25.0% |
| ! | ATTCTCAAACCAAAGAAAAT+AGG | + | chr3_3:4694948-4694967 | None:intergenic | 25.0% |
| !!! | TCTTTCTGTTATTTCATAGT+TGG | - | chr3_3:4695495-4695514 | Msa0439200:intron | 25.0% |
| ! | TAATACAAAATATGCAACTC+TGG | + | chr3_3:4695575-4695594 | None:intergenic | 25.0% |
| ! | TATGAGACTAAGAACAAATA+CGG | - | chr3_3:4696099-4696118 | Msa0439200:intron | 25.0% |
| !!! | TTTAAAAGTAGCACTGATTA+CGG | + | chr3_3:4696228-4696247 | None:intergenic | 25.0% |
| ! | AATTATTCAAAATGCAGAGA+TGG | - | chr3_3:4696282-4696301 | Msa0439200:intron | 25.0% |
| ! | TGTTATGAAATCCTTCAATA+CGG | + | chr3_3:4696449-4696468 | None:intergenic | 25.0% |
| !! | ATATGTCTAAAATGTATGAG+TGG | - | chr3_3:4696591-4696610 | Msa0439200:intron | 25.0% |
| !! | CATACCAATATTTAACTTCA+TGG | - | chr3_3:4696701-4696720 | Msa0439200:five_prime_UTR | 25.0% |
| !! | CAGTTTATTTTCATAGGTCT+TGG | - | chr3_3:4694024-4694043 | Msa0439200:CDS | 30.0% |
| GTATTTGTGTGTTTGATATG+AGG | - | chr3_3:4694166-4694185 | Msa0439200:intron | 30.0% | |
| ! | CTTTCAATTTTGTATGCTTG+AGG | - | chr3_3:4694201-4694220 | Msa0439200:intron | 30.0% |
| ATAGTTAATTCTTTGGACTC+GGG | - | chr3_3:4694270-4694289 | Msa0439200:intron | 30.0% | |
| CAAAATAAGCCTAATCCAAA+CGG | - | chr3_3:4694506-4694525 | Msa0439200:intron | 30.0% | |
| AAAATAAGCCTAATCCAAAC+GGG | - | chr3_3:4694507-4694526 | Msa0439200:intron | 30.0% | |
| !! | GTTGATGGAAATTTTTGACA+GGG | + | chr3_3:4694807-4694826 | None:intergenic | 30.0% |
| !! | TGTTGATGGAAATTTTTGAC+AGG | + | chr3_3:4694808-4694827 | None:intergenic | 30.0% |
| TGAGAATATTATAATAGGGC+TGG | - | chr3_3:4694961-4694980 | Msa0439200:intron | 30.0% | |
| ATGAAATAACAGAAAGAGCA+AGG | + | chr3_3:4695492-4695511 | None:intergenic | 30.0% | |
| TTATTGTTGGATTTATTCCC+TGG | - | chr3_3:4695533-4695552 | Msa0439200:intron | 30.0% | |
| ATCTCTTTATAATATAGGGC+AGG | + | chr3_3:4695863-4695882 | None:intergenic | 30.0% | |
| TTCATTGAACCAAAACTCTT+CGG | + | chr3_3:4695957-4695976 | None:intergenic | 30.0% | |
| AGAATATACTGACGATAAAC+GGG | + | chr3_3:4696028-4696047 | None:intergenic | 30.0% | |
| GAGAATATACTGACGATAAA+CGG | + | chr3_3:4696029-4696048 | None:intergenic | 30.0% | |
| TAACATGAAAGAACAAAGCA+TGG | - | chr3_3:4696423-4696442 | Msa0439200:intron | 30.0% | |
| CTGAAAATAGTTTATGGGCA+TGG | + | chr3_3:4694007-4694026 | None:intergenic | 35.0% | |
| TAGTTAATTCTTTGGACTCG+GGG | - | chr3_3:4694271-4694290 | Msa0439200:intron | 35.0% | |
| TTAGGGACCAAAAATGTTGA+TGG | + | chr3_3:4694822-4694841 | None:intergenic | 35.0% | |
| TTTGGTCCCTAAAATGCTTA+AGG | - | chr3_3:4694830-4694849 | Msa0439200:intron | 35.0% | |
| TGCTTAAGGAAAATGTCACA+AGG | - | chr3_3:4694844-4694863 | Msa0439200:intron | 35.0% | |
| ! | GGGTTGAAGGAAATTGATTT+GGG | - | chr3_3:4695070-4695089 | Msa0439200:intron | 35.0% |
| !! | GGTTGAAGGAAATTGATTTG+GGG | - | chr3_3:4695071-4695090 | Msa0439200:intron | 35.0% |
| CCAATAAATCTTAACCGAAC+CGG | + | chr3_3:4695111-4695130 | None:intergenic | 35.0% | |
| !! | ATAATGGGCTGGACAATATA+TGG | + | chr3_3:4695165-4695184 | None:intergenic | 35.0% |
| !!! | TTTTGTGACATATAATGGGC+TGG | + | chr3_3:4695176-4695195 | None:intergenic | 35.0% |
| GTGAAGATGGAACTTAACAA+CGG | + | chr3_3:4695317-4695336 | None:intergenic | 35.0% | |
| AATCTTCGTCGGAATGAAAA+GGG | + | chr3_3:4695363-4695382 | None:intergenic | 35.0% | |
| AAAGAAGTGAGATTCAGTCT+AGG | + | chr3_3:4695397-4695416 | None:intergenic | 35.0% | |
| ATAACAGAAAGAGCAAGGAT+GGG | + | chr3_3:4695487-4695506 | None:intergenic | 35.0% | |
| AATAACAGAAAGAGCAAGGA+TGG | + | chr3_3:4695488-4695507 | None:intergenic | 35.0% | |
| !! | GTGTTGGTATACATTTTCCA+GGG | + | chr3_3:4695553-4695572 | None:intergenic | 35.0% |
| AAAATATGCAACTCTGGTGT+TGG | + | chr3_3:4695569-4695588 | None:intergenic | 35.0% | |
| TAATCGGTTACGGATTTGAT+CGG | + | chr3_3:4695738-4695757 | None:intergenic | 35.0% | |
| CTAACTCAAAAAATGTGTCG+AGG | + | chr3_3:4695928-4695947 | None:intergenic | 35.0% | |
| !! | AAAGCTTTTGTTTGCGAGTT+TGG | + | chr3_3:4696075-4696094 | None:intergenic | 35.0% |
| AACAGAACAAACTGGGTATT+GGG | + | chr3_3:4696178-4696197 | None:intergenic | 35.0% | |
| CAAAGACAACAGAACAAACT+GGG | + | chr3_3:4696185-4696204 | None:intergenic | 35.0% | |
| TCAAAGACAACAGAACAAAC+TGG | + | chr3_3:4696186-4696205 | None:intergenic | 35.0% | |
| TATTCTGTTCAGGCAATCAA+TGG | - | chr3_3:4696376-4696395 | Msa0439200:intron | 35.0% | |
| TCTCTCTCTCTGTGTCAATA+AGG | - | chr3_3:4693680-4693699 | Msa0439200:three_prime_UTR | 40.0% | |
| GTTCTGCTTGAGGAATTGTT+AGG | - | chr3_3:4693895-4693914 | Msa0439200:CDS | 40.0% | |
| ! | GTTGAGCTTAGCTTGACATT+TGG | - | chr3_3:4694227-4694246 | Msa0439200:intron | 40.0% |
| ! | GGGTCTGTTTGATTGACTTA+GGG | - | chr3_3:4694291-4694310 | Msa0439200:intron | 40.0% |
| AGGAAATAGGAGGAAGGAAA+AGG | - | chr3_3:4694563-4694582 | Msa0439200:intron | 40.0% | |
| ACAGGGACTAAAAATGCTGA+TGG | + | chr3_3:4694790-4694809 | None:intergenic | 40.0% | |
| ! | CGGGTTGAAGGAAATTGATT+TGG | - | chr3_3:4695069-4695088 | Msa0439200:intron | 40.0% |
| !! | TGAAGGAAATTGATTTGGGG+TGG | - | chr3_3:4695074-4695093 | Msa0439200:intron | 40.0% |
| !! | CCGGTTCGGTTAAGATTTAT+TGG | - | chr3_3:4695108-4695127 | Msa0439200:intron | 40.0% |
| GTTAAGATTTATTGGCCCAG+CGG | - | chr3_3:4695116-4695135 | Msa0439200:intron | 40.0% | |
| AATATATGGACTTGGACGGT+CGG | + | chr3_3:4695151-4695170 | None:intergenic | 40.0% | |
| GGACAATATATGGACTTGGA+CGG | + | chr3_3:4695155-4695174 | None:intergenic | 40.0% | |
| AAACAGAAAGATGGAGACAC+AGG | - | chr3_3:4695200-4695219 | Msa0439200:intron | 40.0% | |
| AAAGATGGAGACACAGGATA+CGG | - | chr3_3:4695206-4695225 | Msa0439200:intron | 40.0% | |
| AAGATGGAACTTAACAACGG+CGG | + | chr3_3:4695314-4695333 | None:intergenic | 40.0% | |
| GAATCTTCGTCGGAATGAAA+AGG | + | chr3_3:4695364-4695383 | None:intergenic | 40.0% | |
| !!! | GGTGTTGGTATACATTTTCC+AGG | + | chr3_3:4695554-4695573 | None:intergenic | 40.0% |
| AATCGGTTACGGATTTGATC+GGG | + | chr3_3:4695737-4695756 | None:intergenic | 40.0% | |
| ACACACGATCTAATCGGTTA+CGG | + | chr3_3:4695748-4695767 | None:intergenic | 40.0% | |
| ATAATATAGGGCAGGACAAG+CGG | + | chr3_3:4695855-4695874 | None:intergenic | 40.0% | |
| TGTCGAGGAAAGACTTTGAA+GGG | + | chr3_3:4695913-4695932 | None:intergenic | 40.0% | |
| ! | TAGTCCTTACCGAAGAGTTT+TGG | - | chr3_3:4695945-4695964 | Msa0439200:intron | 40.0% |
| TGAACCAAAACTCTTCGGTA+AGG | + | chr3_3:4695952-4695971 | None:intergenic | 40.0% | |
| GAAAAGTAAACCTCCATGCA+AGG | - | chr3_3:4695977-4695996 | Msa0439200:intron | 40.0% | |
| ACGATAAACGGGAAAGAGAA+GGG | + | chr3_3:4696017-4696036 | None:intergenic | 40.0% | |
| GAGACTAAGAACAAATACGG+TGG | - | chr3_3:4696102-4696121 | Msa0439200:intron | 40.0% | |
| CAACAGAACAAACTGGGTAT+TGG | + | chr3_3:4696179-4696198 | None:intergenic | 40.0% | |
| CACAGAGTCATATTCTGTTC+AGG | - | chr3_3:4696366-4696385 | Msa0439200:intron | 40.0% | |
| TGACGATGATGTTGCTAAGA+AGG | - | chr3_3:4696525-4696544 | Msa0439200:intron | 40.0% | |
| TGCTAAGAAGGCTCAAGTAA+AGG | - | chr3_3:4696537-4696556 | Msa0439200:intron | 40.0% | |
| GCTCAAACACGACAGGATTT+AGG | + | chr3_3:4693639-4693658 | None:intergenic | 45.0% | |
| ! | GGGGTCTGTTTGATTGACTT+AGG | - | chr3_3:4694290-4694309 | Msa0439200:intron | 45.0% |
| ! | TGATTGACTTAGGGCACGTT+TGG | - | chr3_3:4694300-4694319 | Msa0439200:intron | 45.0% |
| ACTTAGGGCACGTTTGGATT+AGG | - | chr3_3:4694306-4694325 | Msa0439200:intron | 45.0% | |
| CTCAAATGCCCGTTTGGATT+AGG | + | chr3_3:4694518-4694537 | None:intergenic | 45.0% | |
| ! | TCCAAACGGGCATTTGAGTT+AGG | - | chr3_3:4694520-4694539 | Msa0439200:intron | 45.0% |
| ! | CCAAACGGGCATTTGAGTTA+GGG | - | chr3_3:4694521-4694540 | Msa0439200:intron | 45.0% |
| ! | GGCATTTGAGTTAGGGAGTT+AGG | - | chr3_3:4694528-4694547 | Msa0439200:intron | 45.0% |
| TGAGTTAGGGAGTTAGGATG+AGG | - | chr3_3:4694534-4694553 | Msa0439200:intron | 45.0% | |
| !!! | CGTTTCGGTTTTAACTGGAC+CGG | + | chr3_3:4695021-4695040 | None:intergenic | 45.0% |
| CGGTCCAGTTAAAACCGAAA+CGG | - | chr3_3:4695019-4695038 | Msa0439200:intron | 45.0% | |
| GGTCCAGTTAAAACCGAAAC+GGG | - | chr3_3:4695020-4695039 | Msa0439200:intron | 45.0% | |
| ! | TGATTTGGGGTGGATAGCAA+TGG | - | chr3_3:4695084-4695103 | Msa0439200:intron | 45.0% |
| ! | GATTTGGGGTGGATAGCAAT+GGG | - | chr3_3:4695085-4695104 | Msa0439200:intron | 45.0% |
| GGCTGGACAATATATGGACT+TGG | + | chr3_3:4695159-4695178 | None:intergenic | 45.0% | |
| GAGAGTAGGGAATGAGTCTA+GGG | + | chr3_3:4695286-4695305 | None:intergenic | 45.0% | |
| TGAGAGTAGGGAATGAGTCT+AGG | + | chr3_3:4695287-4695306 | None:intergenic | 45.0% | |
| AGATTCAGTCTAGGCTAGGA+CGG | + | chr3_3:4695388-4695407 | None:intergenic | 45.0% | |
| AGTGAGATTCAGTCTAGGCT+AGG | + | chr3_3:4695392-4695411 | None:intergenic | 45.0% | |
| TACGGATTTGATCGGGTAGT+CGG | + | chr3_3:4695730-4695749 | None:intergenic | 45.0% | |
| GTCTGCACACACGATCTAAT+CGG | + | chr3_3:4695754-4695773 | None:intergenic | 45.0% | |
| GATTAGATCGTGTGTGCAGA+CGG | - | chr3_3:4695753-4695772 | Msa0439200:intron | 45.0% | |
| GTGTCGAGGAAAGACTTTGA+AGG | + | chr3_3:4695914-4695933 | None:intergenic | 45.0% | |
| AAGTAAACCTCCATGCAAGG+TGG | - | chr3_3:4695980-4695999 | Msa0439200:intron | 45.0% | |
| AGTAAACCTCCATGCAAGGT+GGG | - | chr3_3:4695981-4696000 | Msa0439200:intron | 45.0% | |
| CGATAAACGGGAAAGAGAAG+GGG | + | chr3_3:4696016-4696035 | None:intergenic | 45.0% | |
| GACGATAAACGGGAAAGAGA+AGG | + | chr3_3:4696018-4696037 | None:intergenic | 45.0% | |
| !! | GCTTTTGTTTGCGAGTTTGG+AGG | + | chr3_3:4696072-4696091 | None:intergenic | 45.0% |
| GTGAATGCCACATTTCGTCT+CGG | - | chr3_3:4696343-4696362 | Msa0439200:intron | 45.0% | |
| ACAAAGCATGGCCGTATTGA+AGG | - | chr3_3:4696435-4696454 | Msa0439200:intron | 45.0% | |
| AACATCATCGTCATCTTCCG+AGG | + | chr3_3:4696518-4696537 | None:intergenic | 45.0% | |
| TGAAGCAGCTCAAACACGAC+AGG | + | chr3_3:4693646-4693665 | None:intergenic | 50.0% | |
| CTCTGTGTGTGTTCTGCTTG+AGG | - | chr3_3:4693885-4693904 | Msa0439200:CDS | 50.0% | |
| CCCTAACTCAAATGCCCGTT+TGG | + | chr3_3:4694524-4694543 | None:intergenic | 50.0% | |
| GATGAGGCCTTGGAGGAAAT+AGG | - | chr3_3:4694550-4694569 | Msa0439200:intron | 50.0% | |
| CCTTCCTCCTATTTCCTCCA+AGG | + | chr3_3:4694560-4694579 | None:intergenic | 50.0% | |
| CCTTGGAGGAAATAGGAGGA+AGG | - | chr3_3:4694557-4694576 | Msa0439200:intron | 50.0% | |
| TGGACCGGATTGCACAGTTT+GGG | + | chr3_3:4695006-4695025 | None:intergenic | 50.0% | |
| CCAGTTAAAACCGAAACGGG+CGG | - | chr3_3:4695023-4695042 | Msa0439200:intron | 50.0% | |
| TGAAAAGGGAACTCGACCGA+CGG | + | chr3_3:4695349-4695368 | None:intergenic | 50.0% | |
| CTAGGACGGTGAATCTTCGT+CGG | + | chr3_3:4695374-4695393 | None:intergenic | 50.0% | |
| TGTGTGCAGACGGACGAAAT+TGG | - | chr3_3:4695763-4695782 | Msa0439200:intron | 50.0% | |
| TGCAGACGGACGAAATTGGA+TGG | - | chr3_3:4695767-4695786 | Msa0439200:intron | 50.0% | |
| GCAGACGGACGAAATTGGAT+GGG | - | chr3_3:4695768-4695787 | Msa0439200:intron | 50.0% | |
| GATGGGATATCCTCACCCAT+CGG | - | chr3_3:4695785-4695804 | Msa0439200:intron | 50.0% | |
| GTAAACCTCCATGCAAGGTG+GGG | - | chr3_3:4695982-4696001 | Msa0439200:intron | 50.0% | |
| TAAACCTCCATGCAAGGTGG+GGG | - | chr3_3:4695983-4696002 | Msa0439200:intron | 50.0% | |
| AAATAGTCCCCCACCTTGCA+TGG | + | chr3_3:4695993-4696012 | None:intergenic | 50.0% | |
| GAGTTTGGAGGAGAAGTGAG+GGG | + | chr3_3:4696060-4696079 | None:intergenic | 50.0% | |
| CGAGTTTGGAGGAGAAGTGA+GGG | + | chr3_3:4696061-4696080 | None:intergenic | 50.0% | |
| CGAAATGTGGCATTCACCTG+AGG | + | chr3_3:4696340-4696359 | None:intergenic | 50.0% | |
| ! | GACTCGTCTGGAACATCTTG+AGG | + | chr3_3:4696484-4696503 | None:intergenic | 50.0% |
| GAAGCTTCTAACGACTCGTC+TGG | + | chr3_3:4696496-4696515 | None:intergenic | 50.0% | |
| CGAGTCGTTAGAAGCTTCCT+CGG | - | chr3_3:4696498-4696517 | Msa0439200:intron | 50.0% | |
| AGGGAGTTAGGATGAGGCCT+TGG | - | chr3_3:4694540-4694559 | Msa0439200:intron | 55.0% | |
| GAGTTAGGATGAGGCCTTGG+AGG | - | chr3_3:4694543-4694562 | Msa0439200:intron | 55.0% | |
| GAGGCCTTGGAGGAAATAGG+AGG | - | chr3_3:4694553-4694572 | Msa0439200:intron | 55.0% | |
| CCGGATTGCACAGTTTGGGT+CGG | + | chr3_3:4695002-4695021 | None:intergenic | 55.0% | |
| CCGACCCAAACTGTGCAATC+CGG | - | chr3_3:4694999-4695018 | Msa0439200:intron | 55.0% | |
| CTGGACCGGATTGCACAGTT+TGG | + | chr3_3:4695007-4695026 | None:intergenic | 55.0% | |
| !! | CCGCCCGTTTCGGTTTTAAC+TGG | + | chr3_3:4695026-4695045 | None:intergenic | 55.0% |
| !! | ACCGAAACGGGCGGATTAAC+CGG | - | chr3_3:4695032-4695051 | Msa0439200:intron | 55.0% |
| ! | AACCGGGTTGAGCGGGTAAA+CGG | - | chr3_3:4695049-4695068 | Msa0439200:intron | 55.0% |
| !! | TGAGCGGGTAAACGGGTTGA+AGG | - | chr3_3:4695057-4695076 | Msa0439200:intron | 55.0% |
| TGGATAGCAATGGGCCGGTT+CGG | - | chr3_3:4695094-4695113 | Msa0439200:intron | 55.0% | |
| TGGACTTGGACGGTCGGTAT+AGG | + | chr3_3:4695145-4695164 | None:intergenic | 55.0% | |
| GGTGACTGGTGAGTAGAGAG+AGG | + | chr3_3:4695431-4695450 | None:intergenic | 55.0% | |
| GCAAGGATGGGAGAAGTGAG+TGG | + | chr3_3:4695475-4695494 | None:intergenic | 55.0% | |
| ! | GTTCTGCGGGTGGGTTTGAA+CGG | + | chr3_3:4695708-4695727 | None:intergenic | 55.0% |
| ! | TGATCGGGTAGTCGGTTCTG+CGG | + | chr3_3:4695722-4695741 | None:intergenic | 55.0% |
| CCAAATCCGAAGCTGCCGAT+GGG | + | chr3_3:4695803-4695822 | None:intergenic | 55.0% | |
| ACCAAATCCGAAGCTGCCGA+TGG | + | chr3_3:4695804-4695823 | None:intergenic | 55.0% | |
| TATAGGGCAGGACAAGCGGT+CGG | + | chr3_3:4695851-4695870 | None:intergenic | 55.0% | |
| GGAGAAGTGAGGGGAAGAGT+TGG | + | chr3_3:4696051-4696070 | None:intergenic | 55.0% | |
| GCGAGTTTGGAGGAGAAGTG+AGG | + | chr3_3:4696062-4696081 | None:intergenic | 55.0% | |
| TGCAGTGCTTCCTAGACCTC+AGG | - | chr3_3:4696321-4696340 | Msa0439200:intron | 55.0% | |
| GTGGCATTCACCTGAGGTCT+AGG | + | chr3_3:4696334-4696353 | None:intergenic | 55.0% | |
| CTCTGTGCCGAGACGAAATG+TGG | + | chr3_3:4696353-4696372 | None:intergenic | 55.0% | |
| CCCGGTTAATCCGCCCGTTT+CGG | + | chr3_3:4695036-4695055 | None:intergenic | 60.0% | |
| !! | CCGAAACGGGCGGATTAACC+GGG | - | chr3_3:4695033-4695052 | Msa0439200:intron | 60.0% |
| !! | GGCGGATTAACCGGGTTGAG+CGG | - | chr3_3:4695041-4695060 | Msa0439200:intron | 60.0% |
| ! | GCGGATTAACCGGGTTGAGC+GGG | - | chr3_3:4695042-4695061 | Msa0439200:intron | 60.0% |
| ! | ACCGGGTTGAGCGGGTAAAC+GGG | - | chr3_3:4695050-4695069 | Msa0439200:intron | 60.0% |
| ACCCGTTTACCCGCTCAACC+CGG | + | chr3_3:4695054-4695073 | None:intergenic | 60.0% | |
| TGGGGTGGATAGCAATGGGC+CGG | - | chr3_3:4695089-4695108 | Msa0439200:intron | 60.0% | |
| GGTCGGTATAGGCTACCGCT+GGG | + | chr3_3:4695134-4695153 | None:intergenic | 60.0% | |
| AACGGCGGCTGCTGAGAGTA+GGG | + | chr3_3:4695299-4695318 | None:intergenic | 60.0% | |
| GAAGTGAGTGGAGCGTGTGG+TGG | + | chr3_3:4695463-4695482 | None:intergenic | 60.0% | |
| GGAGAAGTGAGTGGAGCGTG+TGG | + | chr3_3:4695466-4695485 | None:intergenic | 60.0% | |
| ! | GATCGGGTAGTCGGTTCTGC+GGG | + | chr3_3:4695721-4695740 | None:intergenic | 60.0% |
| TCCTCACCCATCGGCAGCTT+CGG | - | chr3_3:4695794-4695813 | Msa0439200:intron | 60.0% | |
| CCCATCGGCAGCTTCGGATT+TGG | - | chr3_3:4695800-4695819 | Msa0439200:intron | 60.0% | |
| !! | GGTCGGTTCGGTCGGATTTC+GGG | + | chr3_3:4695834-4695853 | None:intergenic | 60.0% |
| !! | CGGTCGGTTCGGTCGGATTT+CGG | + | chr3_3:4695835-4695854 | None:intergenic | 60.0% |
| TAGTCCCCCACCTTGCATGG+AGG | + | chr3_3:4695990-4696009 | None:intergenic | 60.0% | |
| CGGTCGGTATAGGCTACCGC+TGG | + | chr3_3:4695135-4695154 | None:intergenic | 65.0% | |
| CAACGGCGGCTGCTGAGAGT+AGG | + | chr3_3:4695300-4695319 | None:intergenic | 65.0% | |
| ACGGCGACGCGGTGTGAAGA+TGG | + | chr3_3:4695330-4695349 | None:intergenic | 65.0% | |
| TCTTCACACCGCGTCGCCGT+CGG | - | chr3_3:4695330-4695349 | Msa0439200:intron | 65.0% | |
| !! | GGTGGTGGACTGGTGGTGAC+TGG | + | chr3_3:4695445-4695464 | None:intergenic | 65.0% |
| !! | AGCGTGTGGTGGTGGACTGG+TGG | + | chr3_3:4695452-4695471 | None:intergenic | 65.0% |
| !! | TGGAGCGTGTGGTGGTGGAC+TGG | + | chr3_3:4695455-4695474 | None:intergenic | 65.0% |
| GTGAGTGGAGCGTGTGGTGG+TGG | + | chr3_3:4695460-4695479 | None:intergenic | 65.0% | |
| ! | GGGTAGTCGGTTCTGCGGGT+GGG | + | chr3_3:4695717-4695736 | None:intergenic | 65.0% |
| TCCGAAGCTGCCGATGGGTG+AGG | + | chr3_3:4695798-4695817 | None:intergenic | 65.0% | |
| !! | GGACAAGCGGTCGGTTCGGT+CGG | + | chr3_3:4695842-4695861 | None:intergenic | 65.0% |
| GGCAGGACAAGCGGTCGGTT+CGG | + | chr3_3:4695846-4695865 | None:intergenic | 65.0% | |
| GAACTCGACCGACGGCGACG+CGG | + | chr3_3:4695341-4695360 | None:intergenic | 70.0% | |
| ! | CGGGTAGTCGGTTCTGCGGG+TGG | + | chr3_3:4695718-4695737 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 4693625 | 4696737 | 4693625 | ID=Msa0439200;Name=Msa0439200 |
| chr3_3 | mRNA | 4693625 | 4696737 | 4693625 | ID=Msa0439200-mRNA-1;Parent=Msa0439200;Name=Msa0439200-mRNA-1;_AED=0.37;_eAED=0.37;_QI=77|0|0.5|1|0|0.5|2|155|93 |
| chr3_3 | exon | 4693625 | 4694061 | 4693625 | ID=Msa0439200-mRNA-1:exon:1073;Parent=Msa0439200-mRNA-1 |
| chr3_3 | exon | 4696661 | 4696737 | 4696661 | ID=Msa0439200-mRNA-1:exon:1072;Parent=Msa0439200-mRNA-1 |
| chr3_3 | five_prime_UTR | 4696661 | 4696737 | 4696661 | ID=Msa0439200-mRNA-1:five_prime_utr;Parent=Msa0439200-mRNA-1 |
| chr3_3 | CDS | 4693780 | 4694061 | 4693780 | ID=Msa0439200-mRNA-1:cds;Parent=Msa0439200-mRNA-1 |
| chr3_3 | three_prime_UTR | 4693625 | 4693779 | 4693625 | ID=Msa0439200-mRNA-1:three_prime_utr;Parent=Msa0439200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
