Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290380 | XP_003628664.2 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1078 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290380 | sp|Q27GI3|NAT6_ARATH | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290380 | G7LFG1 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1078 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa1290380 | 0.817265 | 3.606405e-52 | -8.615850e-47 |
| Msa0013270 | Msa1290380 | 0.800428 | 1.448198e-48 | -8.615850e-47 |
| Msa0015150 | Msa1290380 | 0.821590 | 3.724609e-53 | -8.615850e-47 |
| Msa0025160 | Msa1290380 | 0.820001 | 8.639525e-53 | -8.615850e-47 |
| Msa0029990 | Msa1290380 | 0.813255 | 2.807219e-51 | -8.615850e-47 |
| Msa0033220 | Msa1290380 | 0.817249 | 3.636385e-52 | -8.615850e-47 |
| Msa0038150 | Msa1290380 | -0.804691 | 1.913067e-49 | -8.615850e-47 |
| Msa0038530 | Msa1290380 | 0.805882 | 1.077006e-49 | -8.615850e-47 |
| Msa0044780 | Msa1290380 | -0.808605 | 2.852816e-50 | -8.615850e-47 |
| Msa0050660 | Msa1290380 | 0.802061 | 6.706136e-49 | -8.615850e-47 |
| Msa0050700 | Msa1290380 | 0.803384 | 3.577404e-49 | -8.615850e-47 |
| Msa0050790 | Msa1290380 | 0.802313 | 5.953380e-49 | -8.615850e-47 |
| Msa0057840 | Msa1290380 | 0.803204 | 3.898212e-49 | -8.615850e-47 |
| Msa0062340 | Msa1290380 | 0.818395 | 2.004517e-52 | -8.615850e-47 |
| Msa0064120 | Msa1290380 | 0.818914 | 1.528409e-52 | -8.615850e-47 |
| Msa0071840 | Msa1290380 | 0.809577 | 1.766871e-50 | -8.615850e-47 |
| Msa0072520 | Msa1290380 | 0.839242 | 1.781955e-57 | -8.615850e-47 |
| Msa0077560 | Msa1290380 | 0.808373 | 3.197657e-50 | -8.615850e-47 |
| Msa0079880 | Msa1290380 | 0.810552 | 1.089126e-50 | -8.615850e-47 |
| Msa0080030 | Msa1290380 | 0.813869 | 2.057410e-51 | -8.615850e-47 |
| Msa0085690 | Msa1290380 | -0.801404 | 9.150248e-49 | -8.615850e-47 |
| Msa0094570 | Msa1290380 | 0.817577 | 3.068490e-52 | -8.615850e-47 |
| Msa0094790 | Msa1290380 | 0.806916 | 6.521128e-50 | -8.615850e-47 |
| Msa0102240 | Msa1290380 | 0.847155 | 1.383118e-59 | -8.615850e-47 |
| Msa0106540 | Msa1290380 | 0.801835 | 7.462877e-49 | -8.615850e-47 |
| Msa0108880 | Msa1290380 | 0.816950 | 4.246120e-52 | -8.615850e-47 |
| Msa0110200 | Msa1290380 | 0.805343 | 1.397592e-49 | -8.615850e-47 |
| Msa0607800 | Msa1290380 | 0.824332 | 8.548892e-54 | -8.615850e-47 |
| Msa0610700 | Msa1290380 | -0.801342 | 9.420971e-49 | -8.615850e-47 |
| Msa0619710 | Msa1290380 | 0.823390 | 1.421055e-53 | -8.615850e-47 |
| Msa0648040 | Msa1290380 | 0.823147 | 1.619938e-53 | -8.615850e-47 |
| Msa0657210 | Msa1290380 | 0.816164 | 6.367152e-52 | -8.615850e-47 |
| Msa0657710 | Msa1290380 | 0.822843 | 1.906489e-53 | -8.615850e-47 |
| Msa0660090 | Msa1290380 | 0.808372 | 3.199058e-50 | -8.615850e-47 |
| Msa0690740 | Msa1290380 | 0.818577 | 1.823253e-52 | -8.615850e-47 |
| Msa0701250 | Msa1290380 | 0.803502 | 3.381624e-49 | -8.615850e-47 |
| Msa0702800 | Msa1290380 | 0.818647 | 1.757744e-52 | -8.615850e-47 |
| Msa0706150 | Msa1290380 | 0.836461 | 9.232679e-57 | -8.615850e-47 |
| Msa0709440 | Msa1290380 | 0.815940 | 7.144067e-52 | -8.615850e-47 |
| Msa0716890 | Msa1290380 | 0.800531 | 1.379906e-48 | -8.615850e-47 |
| Msa0717900 | Msa1290380 | 0.801414 | 9.106665e-49 | -8.615850e-47 |
| Msa0719270 | Msa1290380 | 0.833534 | 5.047771e-56 | -8.615850e-47 |
| Msa0722890 | Msa1290380 | 0.826222 | 3.053876e-54 | -8.615850e-47 |
| Msa0723090 | Msa1290380 | 0.812159 | 4.877294e-51 | -8.615850e-47 |
| Msa0734250 | Msa1290380 | 0.828373 | 9.318790e-55 | -8.615850e-47 |
| Msa0736440 | Msa1290380 | 0.800323 | 1.520991e-48 | -8.615850e-47 |
| Msa0740090 | Msa1290380 | 0.830809 | 2.382930e-55 | -8.615850e-47 |
| Msa0743440 | Msa1290380 | 0.806935 | 6.458650e-50 | -8.615850e-47 |
| Msa0745140 | Msa1290380 | 0.837649 | 4.589665e-57 | -8.615850e-47 |
| Msa0772220 | Msa1290380 | 0.807221 | 5.618699e-50 | -8.615850e-47 |
| Msa0775660 | Msa1290380 | 0.814962 | 1.179366e-51 | -8.615850e-47 |
| Msa0776640 | Msa1290380 | 0.840629 | 7.747919e-58 | -8.615850e-47 |
| Msa0778600 | Msa1290380 | 0.813229 | 2.845690e-51 | -8.615850e-47 |
| Msa0780910 | Msa1290380 | 0.826838 | 2.177916e-54 | -8.615850e-47 |
| Msa0782750 | Msa1290380 | 0.814158 | 1.776844e-51 | -8.615850e-47 |
| Msa0811690 | Msa1290380 | 0.804874 | 1.751420e-49 | -8.615850e-47 |
| Msa0813160 | Msa1290380 | 0.811881 | 5.608086e-51 | -8.615850e-47 |
| Msa0820380 | Msa1290380 | 0.818123 | 2.309573e-52 | -8.615850e-47 |
| Msa0821160 | Msa1290380 | 0.819786 | 9.671047e-53 | -8.615850e-47 |
| Msa0825920 | Msa1290380 | 0.839794 | 1.280585e-57 | -8.615850e-47 |
| Msa0828960 | Msa1290380 | 0.826456 | 2.685485e-54 | -8.615850e-47 |
| Msa0837460 | Msa1290380 | 0.803898 | 2.797744e-49 | -8.615850e-47 |
| Msa0838620 | Msa1290380 | -0.800402 | 1.465794e-48 | -8.615850e-47 |
| Msa0840520 | Msa1290380 | 0.832714 | 8.073026e-56 | -8.615850e-47 |
| Msa0125590 | Msa1290380 | 0.802754 | 4.828355e-49 | -8.615850e-47 |
| Msa0132700 | Msa1290380 | 0.826183 | 3.120626e-54 | -8.615850e-47 |
| Msa0139500 | Msa1290380 | 0.804174 | 2.451305e-49 | -8.615850e-47 |
| Msa0146650 | Msa1290380 | 0.813739 | 2.197398e-51 | -8.615850e-47 |
| Msa0155180 | Msa1290380 | 0.819636 | 1.046461e-52 | -8.615850e-47 |
| Msa0165640 | Msa1290380 | 0.810581 | 1.073285e-50 | -8.615850e-47 |
| Msa0181880 | Msa1290380 | 0.809125 | 2.208373e-50 | -8.615850e-47 |
| Msa0190730 | Msa1290380 | 0.803865 | 2.842072e-49 | -8.615850e-47 |
| Msa0203080 | Msa1290380 | 0.832932 | 7.127623e-56 | -8.615850e-47 |
| Msa0204950 | Msa1290380 | 0.801880 | 7.308986e-49 | -8.615850e-47 |
| Msa0211460 | Msa1290380 | 0.803733 | 3.027608e-49 | -8.615850e-47 |
| Msa0221180 | Msa1290380 | 0.806831 | 6.795363e-50 | -8.615850e-47 |
| Msa1228580 | Msa1290380 | 0.832762 | 7.855841e-56 | -8.615850e-47 |
| Msa1254540 | Msa1290380 | 0.816507 | 5.337879e-52 | -8.615850e-47 |
| Msa1261160 | Msa1290380 | 0.813475 | 2.512313e-51 | -8.615850e-47 |
| Msa1263780 | Msa1290380 | 0.819064 | 1.413202e-52 | -8.615850e-47 |
| Msa1267930 | Msa1290380 | 0.804223 | 2.394691e-49 | -8.615850e-47 |
| Msa1290380 | Msa1290440 | 0.997403 | 6.412859e-242 | -8.615850e-47 |
| Msa1290380 | Msa1294280 | 0.828647 | 8.001297e-55 | -8.615850e-47 |
| Msa1290380 | Msa1294460 | 0.824431 | 8.103618e-54 | -8.615850e-47 |
| Msa1290380 | Msa1294790 | 0.808200 | 3.481325e-50 | -8.615850e-47 |
| Msa1290380 | Msa1295480 | -0.810744 | 9.898844e-51 | -8.615850e-47 |
| Msa1290380 | Msa1306820 | 0.806964 | 6.369698e-50 | -8.615850e-47 |
| Msa1290380 | Msa1308850 | 0.838696 | 2.466230e-57 | -8.615850e-47 |
| Msa1290380 | Msa1308860 | 0.809690 | 1.670392e-50 | -8.615850e-47 |
| Msa1290380 | Msa1327800 | 0.851124 | 1.088518e-60 | -8.615850e-47 |
| Msa1290380 | Msa1332950 | 0.814624 | 1.401195e-51 | -8.615850e-47 |
| Msa1290380 | Msa1348170 | -0.801531 | 8.616242e-49 | -8.615850e-47 |
| Msa1290380 | Msa1364680 | 0.836700 | 8.026913e-57 | -8.615850e-47 |
| Msa1290380 | Msa1365820 | 0.824783 | 6.693710e-54 | -8.615850e-47 |
| Msa1290380 | Msa1368390 | 0.843976 | 1.006114e-58 | -8.615850e-47 |
| Msa1290380 | Msa1368750 | 0.830271 | 3.226614e-55 | -8.615850e-47 |
| Msa1290380 | Msa1374790 | 0.830468 | 2.887972e-55 | -8.615850e-47 |
| Msa1290380 | Msa1381030 | 0.810947 | 8.947297e-51 | -8.615850e-47 |
| Msa1290380 | Msa1384150 | 0.826007 | 3.435904e-54 | -8.615850e-47 |
| Msa1290380 | Msa1387440 | 0.800329 | 1.516820e-48 | -8.615850e-47 |
| Msa1290380 | Msa1387500 | 0.802479 | 5.500751e-49 | -8.615850e-47 |
| Msa1290380 | Msa1391500 | 0.805524 | 1.280306e-49 | -8.615850e-47 |
| Msa1290380 | Msa1405830 | 0.801618 | 8.271589e-49 | -8.615850e-47 |
| Msa1290380 | Msa1406720 | 0.823060 | 1.697283e-53 | -8.615850e-47 |
| Msa1290380 | Msa1407810 | 0.822926 | 1.824107e-53 | -8.615850e-47 |
| Msa1290380 | Msa1407840 | 0.825515 | 4.494719e-54 | -8.615850e-47 |
| Msa1290380 | Msa1409410 | 0.829501 | 4.967898e-55 | -8.615850e-47 |
| Msa1290380 | Msa1410160 | 0.816891 | 4.376117e-52 | -8.615850e-47 |
| Msa1290380 | Msa1417370 | 0.827140 | 1.843566e-54 | -8.615850e-47 |
| Msa1290380 | Msa1429860 | 0.807251 | 5.539060e-50 | -8.615850e-47 |
| Msa1290380 | Msa1433360 | 0.822485 | 2.310355e-53 | -8.615850e-47 |
| Msa1290380 | Msa1435630 | 0.822151 | 2.760928e-53 | -8.615850e-47 |
| Msa1290380 | Msa1436620 | 0.832433 | 9.480383e-56 | -8.615850e-47 |
| Msa1290380 | Msa1437780 | 0.822492 | 2.301780e-53 | -8.615850e-47 |
| Msa1290380 | Msa1437810 | 0.827419 | 1.580842e-54 | -8.615850e-47 |
| Msa1290380 | Msa1440430 | 0.810275 | 1.249759e-50 | -8.615850e-47 |
| Msa1290380 | Msa1440630 | 0.802703 | 4.946382e-49 | -8.615850e-47 |
| Msa1290380 | Msa1451820 | 0.831747 | 1.401136e-55 | -8.615850e-47 |
| Msa1290380 | Msa1454500 | 0.807839 | 4.154453e-50 | -8.615850e-47 |
| Msa1290380 | Msa1457770 | 0.804942 | 1.695412e-49 | -8.615850e-47 |
| Msa1290380 | Msa1457840 | 0.802576 | 5.253712e-49 | -8.615850e-47 |
| Msa0365210 | Msa1290380 | 0.817669 | 2.924929e-52 | -8.615850e-47 |
| Msa0380490 | Msa1290380 | 0.800383 | 1.478755e-48 | -8.615850e-47 |
| Msa0382530 | Msa1290380 | 0.821690 | 3.530244e-53 | -8.615850e-47 |
| Msa0383000 | Msa1290380 | 0.810774 | 9.749953e-51 | -8.615850e-47 |
| Msa0386540 | Msa1290380 | 0.813856 | 2.070536e-51 | -8.615850e-47 |
| Msa0386880 | Msa1290380 | 0.821080 | 4.883768e-53 | -8.615850e-47 |
| Msa0412790 | Msa1290380 | 0.808905 | 2.461322e-50 | -8.615850e-47 |
| Msa0421130 | Msa1290380 | 0.804773 | 1.838830e-49 | -8.615850e-47 |
| Msa0432010 | Msa1290380 | 0.830855 | 2.321254e-55 | -8.615850e-47 |
| Msa0437480 | Msa1290380 | 0.810734 | 9.949646e-51 | -8.615850e-47 |
| Msa0457570 | Msa1290380 | 0.826632 | 2.438445e-54 | -8.615850e-47 |
| Msa0466520 | Msa1290380 | 0.818362 | 2.039100e-52 | -8.615850e-47 |
| Msa0466880 | Msa1290380 | 0.811130 | 8.165057e-51 | -8.615850e-47 |
| Msa0467170 | Msa1290380 | 0.839952 | 1.164797e-57 | -8.615850e-47 |
| Msa0467330 | Msa1290380 | 0.843321 | 1.505373e-58 | -8.615850e-47 |
| Msa0481670 | Msa1290380 | 0.823467 | 1.363536e-53 | -8.615850e-47 |
| Msa0481890 | Msa1290380 | 0.815280 | 1.002191e-51 | -8.615850e-47 |
| Msa1002640 | Msa1290380 | 0.806703 | 7.232009e-50 | -8.615850e-47 |
| Msa1014320 | Msa1290380 | 0.817047 | 4.037749e-52 | -8.615850e-47 |
| Msa1022420 | Msa1290380 | 0.805025 | 1.629344e-49 | -8.615850e-47 |
| Msa1031410 | Msa1290380 | 0.819209 | 1.309741e-52 | -8.615850e-47 |
| Msa1042300 | Msa1290380 | 0.817387 | 3.385855e-52 | -8.615850e-47 |
| Msa1044250 | Msa1290380 | 0.851235 | 1.012926e-60 | -8.615850e-47 |
| Msa1052730 | Msa1290380 | 0.804146 | 2.484962e-49 | -8.615850e-47 |
| Msa1055310 | Msa1290380 | 0.813284 | 2.766987e-51 | -8.615850e-47 |
| Msa1068940 | Msa1290380 | 0.811412 | 7.093675e-51 | -8.615850e-47 |
| Msa1068960 | Msa1290380 | 0.825346 | 4.928385e-54 | -8.615850e-47 |
| Msa1082410 | Msa1290380 | 0.819490 | 1.129913e-52 | -8.615850e-47 |
| Msa1084530 | Msa1290380 | 0.817071 | 3.987879e-52 | -8.615850e-47 |
| Msa1104110 | Msa1290380 | 0.801982 | 6.963987e-49 | -8.615850e-47 |
| Msa1106590 | Msa1290380 | 0.832799 | 7.690198e-56 | -8.615850e-47 |
| Msa0262750 | Msa1290380 | 0.820314 | 7.324301e-53 | -8.615850e-47 |
| Msa0272260 | Msa1290380 | 0.811563 | 6.577925e-51 | -8.615850e-47 |
| Msa0284800 | Msa1290380 | 0.844954 | 5.490511e-59 | -8.615850e-47 |
| Msa0300470 | Msa1290380 | 0.809393 | 1.935171e-50 | -8.615850e-47 |
| Msa0313900 | Msa1290380 | 0.804257 | 2.355653e-49 | -8.615850e-47 |
| Msa0320600 | Msa1290380 | 0.804044 | 2.609773e-49 | -8.615850e-47 |
| Msa0326710 | Msa1290380 | 0.806835 | 6.780579e-50 | -8.615850e-47 |
| Msa0330520 | Msa1290380 | 0.829891 | 3.993665e-55 | -8.615850e-47 |
| Msa0337970 | Msa1290380 | 0.819468 | 1.143075e-52 | -8.615850e-47 |
| Msa0354840 | Msa1290380 | 0.827715 | 1.342479e-54 | -8.615850e-47 |
| Msa0359010 | Msa1290380 | 0.804301 | 2.307180e-49 | -8.615850e-47 |
| Msa1125250 | Msa1290380 | 0.805872 | 1.082293e-49 | -8.615850e-47 |
| Msa1125820 | Msa1290380 | 0.815202 | 1.043326e-51 | -8.615850e-47 |
| Msa1125990 | Msa1290380 | 0.816241 | 6.122164e-52 | -8.615850e-47 |
| Msa1147700 | Msa1290380 | 0.813467 | 2.522288e-51 | -8.615850e-47 |
| Msa1149910 | Msa1290380 | 0.827809 | 1.274231e-54 | -8.615850e-47 |
| Msa1154320 | Msa1290380 | 0.819697 | 1.013800e-52 | -8.615850e-47 |
| Msa1156710 | Msa1290380 | 0.803092 | 4.111551e-49 | -8.615850e-47 |
| Msa1156720 | Msa1290380 | 0.811696 | 6.151502e-51 | -8.615850e-47 |
| Msa1156730 | Msa1290380 | 0.808310 | 3.298041e-50 | -8.615850e-47 |
| Msa1166290 | Msa1290380 | 0.804301 | 2.307042e-49 | -8.615850e-47 |
| Msa1171290 | Msa1290380 | 0.809952 | 1.467224e-50 | -8.615850e-47 |
| Msa1183910 | Msa1290380 | 0.806085 | 9.760898e-50 | -8.615850e-47 |
| Msa1192560 | Msa1290380 | 0.817045 | 4.041762e-52 | -8.615850e-47 |
| Msa1192590 | Msa1290380 | 0.809625 | 1.724686e-50 | -8.615850e-47 |
| Msa1194240 | Msa1290380 | 0.859052 | 5.399664e-63 | -8.615850e-47 |
| Msa1201170 | Msa1290380 | 0.807466 | 4.984979e-50 | -8.615850e-47 |
| Msa1201780 | Msa1290380 | 0.809973 | 1.452073e-50 | -8.615850e-47 |
| Msa1211640 | Msa1290380 | 0.819934 | 8.946807e-53 | -8.615850e-47 |
| Msa0520870 | Msa1290380 | 0.806961 | 6.377701e-50 | -8.615850e-47 |
| Msa0525210 | Msa1290380 | 0.818314 | 2.090681e-52 | -8.615850e-47 |
| Msa0531960 | Msa1290380 | 0.801546 | 8.555803e-49 | -8.615850e-47 |
| Msa0541740 | Msa1290380 | 0.806390 | 8.420042e-50 | -8.615850e-47 |
| Msa0566280 | Msa1290380 | 0.806976 | 6.332424e-50 | -8.615850e-47 |
| Msa0567330 | Msa1290380 | 0.818892 | 1.546496e-52 | -8.615850e-47 |
| Msa0567570 | Msa1290380 | 0.816340 | 5.815825e-52 | -8.615850e-47 |
| Msa0570010 | Msa1290380 | 0.801280 | 9.699547e-49 | -8.615850e-47 |
| Msa0574900 | Msa1290380 | 0.805700 | 1.175955e-49 | -8.615850e-47 |
| Msa0576320 | Msa1290380 | 0.809548 | 1.792264e-50 | -8.615850e-47 |
| Msa0580810 | Msa1290380 | 0.800805 | 1.213072e-48 | -8.615850e-47 |
| Msa0586200 | Msa1290380 | 0.809626 | 1.724080e-50 | -8.615850e-47 |
| Msa0853590 | Msa1290380 | 0.840588 | 7.944486e-58 | -8.615850e-47 |
| Msa0865420 | Msa1290380 | 0.846752 | 1.782326e-59 | -8.615850e-47 |
| Msa0865450 | Msa1290380 | 0.807293 | 5.426670e-50 | -8.615850e-47 |
| Msa0866530 | Msa1290380 | 0.802404 | 5.700730e-49 | -8.615850e-47 |
| Msa0900090 | Msa1290380 | 0.800037 | 1.738897e-48 | -8.615850e-47 |
| Msa0930770 | Msa1290380 | 0.803208 | 3.889603e-49 | -8.615850e-47 |
| Msa0945030 | Msa1290380 | 0.848098 | 7.607815e-60 | -8.615850e-47 |
| Msa0956350 | Msa1290380 | 0.801890 | 7.273113e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290380 | MtrunA17_Chr8g0364611 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1078 |
| Msa1290380 | MtrunA17_Chr5g0414131 | 82.609 | 529 | 91 | 1 | 6 | 533 | 10 | 538 | 0.0 | 901 |
| Msa1290380 | MtrunA17_Chr4g0059331 | 81.801 | 533 | 96 | 1 | 1 | 533 | 1 | 532 | 0.0 | 899 |
| Msa1290380 | MtrunA17_Chr3g0117941 | 80.863 | 533 | 101 | 1 | 1 | 533 | 1 | 532 | 0.0 | 889 |
| Msa1290380 | MtrunA17_Chr3g0134911 | 57.066 | 559 | 194 | 4 | 13 | 533 | 35 | 585 | 0.0 | 655 |
| Msa1290380 | MtrunA17_Chr2g0284061 | 59.962 | 522 | 206 | 2 | 10 | 531 | 4 | 522 | 0.0 | 649 |
| Msa1290380 | MtrunA17_Chr8g0379171 | 59.846 | 518 | 206 | 1 | 14 | 531 | 7 | 522 | 0.0 | 645 |
| Msa1290380 | MtrunA17_Chr1g0207021 | 59.962 | 527 | 208 | 2 | 6 | 532 | 3 | 526 | 0.0 | 644 |
| Msa1290380 | MtrunA17_Chr5g0405471 | 57.407 | 540 | 210 | 3 | 11 | 533 | 26 | 562 | 0.0 | 639 |
| Msa1290380 | MtrunA17_Chr3g0119521 | 58.252 | 515 | 212 | 2 | 18 | 531 | 6 | 518 | 0.0 | 612 |
| Msa1290380 | MtrunA17_Chr1g0154001 | 51.852 | 513 | 241 | 3 | 22 | 532 | 38 | 546 | 0.0 | 520 |
| Msa1290380 | MtrunA17_Chr8g0367361 | 34.823 | 537 | 312 | 5 | 26 | 530 | 238 | 768 | 2.34e-106 | 335 |
| Msa1290380 | MtrunA17_Chr5g0412181 | 36.873 | 518 | 289 | 5 | 41 | 526 | 182 | 693 | 6.03e-103 | 325 |
| Msa1290380 | MtrunA17_Chr4g0027121 | 34.549 | 521 | 302 | 5 | 44 | 530 | 171 | 686 | 6.39e-97 | 308 |
| Msa1290380 | MtrunA17_Chr2g0320981 | 34.933 | 521 | 299 | 5 | 44 | 530 | 164 | 678 | 8.39e-96 | 305 |
| Msa1290380 | MtrunA17_Chr2g0332871 | 31.881 | 505 | 296 | 6 | 47 | 530 | 166 | 643 | 3.16e-86 | 279 |
| Msa1290380 | MtrunA17_Chr8g0379181 | 50.000 | 56 | 28 | 0 | 406 | 461 | 7 | 62 | 5.18e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290380 | AT5G62890.1 | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Msa1290380 | AT5G62890.2 | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Msa1290380 | AT5G62890.3 | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Msa1290380 | AT1G60030.1 | 80.645 | 527 | 102 | 0 | 7 | 533 | 12 | 538 | 0.0 | 897 |
| Msa1290380 | AT5G49990.2 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290380 | AT5G49990.3 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290380 | AT5G49990.1 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290380 | AT5G49990.4 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290380 | AT1G10540.1 | 73.792 | 538 | 135 | 3 | 1 | 532 | 1 | 538 | 0.0 | 831 |
| Msa1290380 | AT5G62890.4 | 82.646 | 461 | 79 | 1 | 1 | 461 | 1 | 460 | 0.0 | 785 |
| Msa1290380 | AT1G49960.1 | 61.111 | 522 | 203 | 0 | 11 | 532 | 4 | 525 | 0.0 | 656 |
| Msa1290380 | AT2G34190.1 | 59.459 | 518 | 208 | 1 | 14 | 531 | 7 | 522 | 0.0 | 643 |
| Msa1290380 | AT1G65550.1 | 56.144 | 529 | 223 | 2 | 11 | 532 | 14 | 540 | 0.0 | 628 |
| Msa1290380 | AT2G05760.1 | 56.286 | 517 | 223 | 2 | 16 | 531 | 4 | 518 | 0.0 | 605 |
| Msa1290380 | AT1G10540.2 | 74.227 | 388 | 94 | 3 | 1 | 382 | 1 | 388 | 0.0 | 593 |
| Msa1290380 | AT2G26510.1 | 48.833 | 514 | 262 | 1 | 19 | 532 | 36 | 548 | 2.10e-175 | 506 |
| Msa1290380 | AT5G25420.1 | 50.229 | 436 | 149 | 4 | 11 | 446 | 26 | 393 | 1.64e-144 | 422 |
| Msa1290380 | AT2G26510.3 | 50.549 | 364 | 180 | 0 | 19 | 382 | 36 | 399 | 6.42e-123 | 367 |
| Msa1290380 | AT2G26510.2 | 49.858 | 351 | 176 | 0 | 19 | 369 | 36 | 386 | 1.54e-116 | 351 |
| Msa1290380 | AT2G27810.1 | 34.595 | 555 | 320 | 6 | 14 | 530 | 152 | 701 | 8.84e-99 | 314 |
| Msa1290380 | AT2G27810.4 | 33.161 | 579 | 320 | 7 | 14 | 530 | 152 | 725 | 8.41e-94 | 301 |
| Msa1290380 | AT4G38050.1 | 35.057 | 522 | 301 | 4 | 41 | 530 | 189 | 704 | 2.61e-91 | 295 |
| Msa1290380 | AT2G27810.2 | 37.813 | 439 | 250 | 4 | 14 | 430 | 152 | 589 | 1.21e-84 | 274 |
| Msa1290380 | AT2G27810.3 | 37.755 | 392 | 221 | 4 | 14 | 383 | 152 | 542 | 7.15e-74 | 244 |
Find 136 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTTGGACTGTATGAATT+TGG | 0.149654 | 8_3:-45111430 | Msa1290380:CDS |
| AACAACTATTTCGATTATTT+TGG | 0.157131 | 8_3:-45111944 | Msa1290380:CDS |
| AATATATATGTAGGAAAATT+TGG | 0.187280 | 8_3:-45109564 | Msa1290380:intron |
| AGCATTTGTTGCCAGTTTAT+TGG | 0.207869 | 8_3:-45108908 | Msa1290380:CDS |
| CAAACAAGAAGTCAAGTTTA+AGG | 0.212599 | 8_3:+45113089 | None:intergenic |
| TCAACACTTCAAATTGTTCT+TGG | 0.257245 | 8_3:-45111739 | Msa1290380:CDS |
| CTTGCAAAATGCGTGGAAAT+TGG | 0.267827 | 8_3:-45111294 | Msa1290380:CDS |
| ATAATGTTATCTGGAATCTT+TGG | 0.270420 | 8_3:-45110129 | Msa1290380:CDS |
| TTGGTTGCTCTCTCAGGCTT+TGG | 0.275859 | 8_3:-45111445 | Msa1290380:CDS |
| ACAGATCGTGCCGGAATTAT+AGG | 0.284987 | 8_3:-45110979 | Msa1290380:CDS |
| ACTACTAGGATGATGATTTC+TGG | 0.292845 | 8_3:+45111267 | None:intergenic |
| ATGAATAATTTCTTCACTCT+TGG | 0.313211 | 8_3:+45113060 | None:intergenic |
| GTTCCATTGGTTGCTCTCTC+AGG | 0.316235 | 8_3:-45111451 | Msa1290380:CDS |
| GAAGTGTTGAAGCAACTATA+AGG | 0.319361 | 8_3:+45111752 | None:intergenic |
| ACTCGTCTACCTGCGGTTAT+TGG | 0.330066 | 8_3:-45111988 | Msa1290380:CDS |
| TTTAGAACAAAATTCATCTT+AGG | 0.336915 | 8_3:-45109333 | Msa1290380:CDS |
| TATAGAGAATCCCATGAAAA+TGG | 0.352086 | 8_3:+45109305 | None:intergenic |
| GACGAGTTCCAAATGTTGTT+TGG | 0.353107 | 8_3:+45112004 | None:intergenic |
| TATGCTTATCTTCTTACTGT+TGG | 0.361248 | 8_3:-45111048 | Msa1290380:CDS |
| CAAATTGTTCTTGGCTTTAG+TGG | 0.362555 | 8_3:-45111730 | Msa1290380:CDS |
| TAATGTTATCTGGAATCTTT+GGG | 0.364132 | 8_3:-45110128 | Msa1290380:CDS |
| TGAATAATTTCTTCACTCTT+GGG | 0.372004 | 8_3:+45113061 | None:intergenic |
| AAACAAGAAGTCAAGTTTAA+GGG | 0.378748 | 8_3:+45113090 | None:intergenic |
| TCCTCTCTCTGCTGTTCCAT+TGG | 0.380614 | 8_3:-45111464 | Msa1290380:CDS |
| GCTTATCTTCTTACTGTTGG+TGG | 0.382600 | 8_3:-45111045 | Msa1290380:CDS |
| TCGATTTGCAGTTATATTCT+CGG | 0.386839 | 8_3:-45111088 | Msa1290380:CDS |
| CAATATAAAGCTGCAACTAT+TGG | 0.396056 | 8_3:+45109516 | None:intergenic |
| CTAAGAACTGAAGGTGGAAT+TGG | 0.398423 | 8_3:+45110314 | None:intergenic |
| TTTGGTAATTGATCTTTAAC+CGG | 0.400618 | 8_3:+45112739 | None:intergenic |
| GGAATCTTTGGGACGGGGAA+TGG | 0.403946 | 8_3:-45110117 | Msa1290380:CDS |
| GGAGTGGGAATAATGTTATC+TGG | 0.409107 | 8_3:-45110138 | Msa1290380:CDS |
| GTTCTCAGAAGTTTGAGTTT+TGG | 0.413475 | 8_3:-45112844 | Msa1290380:five_prime_UTR |
| ACAAATGCTTCTGATGCAAA+TGG | 0.417511 | 8_3:+45108922 | None:intergenic |
| AAAATAATCGAAATAGTTGT+TGG | 0.427661 | 8_3:+45111946 | None:intergenic |
| AGGAGCACCACCTATAATTC+CGG | 0.429912 | 8_3:+45110969 | None:intergenic |
| TTTCTTGTTCCACAGTCAAC+AGG | 0.435265 | 8_3:-45110374 | Msa1290380:intron |
| AAGTGTTGAAGCAACTATAA+GGG | 0.436382 | 8_3:+45111753 | None:intergenic |
| GTAATACAATAAGAAACATT+TGG | 0.436718 | 8_3:+45112721 | None:intergenic |
| GGAAGAAGTTCATCTAGCTT+TGG | 0.438949 | 8_3:+45112766 | None:intergenic |
| CAACATTACCTTGTGATGCT+TGG | 0.442847 | 8_3:-45112235 | Msa1290380:CDS |
| GATTCAGACTCTACTATTTG+TGG | 0.446047 | 8_3:-45112046 | Msa1290380:CDS |
| TTCTTGGCTTTAGTGGACTT+TGG | 0.452149 | 8_3:-45111723 | Msa1290380:CDS |
| GAAGCTGAGGCAATCCTACT+TGG | 0.453748 | 8_3:-45112262 | Msa1290380:intron |
| TGAGGTTGAGAAATTGATGT+AGG | 0.457463 | 8_3:-45112909 | Msa1290380:five_prime_UTR |
| AATTGATCTTTAACCGGATG+TGG | 0.458173 | 8_3:+45112745 | None:intergenic |
| ATCTAGTTTCGTGTCTCTGT+CGG | 0.462097 | 8_3:-45112952 | Msa1290380:five_prime_UTR |
| CCGCAGGGTTGTTCAAATAT+CGG | 0.465428 | 8_3:-45109869 | Msa1290380:CDS |
| TGTTTAAATTGCAAAATTGA+AGG | 0.465704 | 8_3:+45109358 | None:intergenic |
| TTATCTGGAATCTTTGGGAC+GGG | 0.466849 | 8_3:-45110123 | Msa1290380:CDS |
| ACTGCAAATCGATCAAAGAT+AGG | 0.467601 | 8_3:+45111099 | None:intergenic |
| GAGTCCCGTATCCCTTTCAA+TGG | 0.474945 | 8_3:-45110773 | Msa1290380:CDS |
| AAAGCTGCAACTATTGGTGC+TGG | 0.480315 | 8_3:+45109522 | None:intergenic |
| ATCTGAGGGACTAGAGAGCT+TGG | 0.483173 | 8_3:+45112196 | None:intergenic |
| GAATTATAGGTGGTGCTCCT+TGG | 0.486079 | 8_3:-45110966 | Msa1290380:intron |
| CATCTTGCGCGTGTGTGTAC+AGG | 0.486445 | 8_3:+45109240 | None:intergenic |
| AATCAAACACGTAAAGATAG+AGG | 0.492332 | 8_3:-45108850 | Msa1290380:CDS |
| GTGTAATTAGACCATGCTCT+TGG | 0.493072 | 8_3:-45108730 | Msa1290380:exon |
| AGATGAACTTCTTCCACATC+CGG | 0.493420 | 8_3:-45112758 | Msa1290380:CDS |
| CGTCTACCTGCGGTTATTGG+AGG | 0.495761 | 8_3:-45111985 | Msa1290380:CDS |
| AGAAATTTGAGAAGATAATG+AGG | 0.496651 | 8_3:-45111789 | Msa1290380:CDS |
| TAGCAGAGGTGTAGGTTGGC+AGG | 0.497651 | 8_3:-45110294 | Msa1290380:intron |
| TGACGCGTGTAGGTAGCCGC+AGG | 0.498429 | 8_3:-45109885 | Msa1290380:CDS |
| AGTCCCGTATCCCTTTCAAT+GGG | 0.498864 | 8_3:-45110772 | Msa1290380:CDS |
| TTCTTAGCAGAGGTGTAGGT+TGG | 0.500569 | 8_3:-45110298 | Msa1290380:CDS |
| TACACAGCATTTAAAAGCTA+TGG | 0.503124 | 8_3:-45109264 | Msa1290380:CDS |
| GTTTCACCAGCATCAAATGT+TGG | 0.514762 | 8_3:+45110744 | None:intergenic |
| CAAATGCTTCTGATGCAAAT+GGG | 0.516521 | 8_3:+45108923 | None:intergenic |
| CTGTACACACACGCGCAAGA+TGG | 0.516786 | 8_3:-45109239 | Msa1290380:CDS |
| GAGGTTGAGAAATTGATGTA+GGG | 0.518548 | 8_3:-45112908 | Msa1290380:five_prime_UTR |
| GCTCCCCATTGAAAGGGATA+CGG | 0.521423 | 8_3:+45110768 | None:intergenic |
| GAAATTTGAGAAGATAATGA+GGG | 0.527302 | 8_3:-45111788 | Msa1290380:CDS |
| TCAGTTCTTAGCAGAGGTGT+AGG | 0.527841 | 8_3:-45110302 | Msa1290380:CDS |
| AGTTCATCTAGCTTTGGTTG+TGG | 0.528453 | 8_3:+45112772 | None:intergenic |
| CTCCCCATTGAAAGGGATAC+GGG | 0.528947 | 8_3:+45110769 | None:intergenic |
| TACCCACATAGGCAAAGAAA+AGG | 0.529465 | 8_3:+45109493 | None:intergenic |
| CATTTCCTCCTCCCATCTGA+GGG | 0.532316 | 8_3:+45112182 | None:intergenic |
| TGTTGGAGCTCCCCATTGAA+AGG | 0.534302 | 8_3:+45110761 | None:intergenic |
| AGGGTTGTTCAAATATCGGC+TGG | 0.534987 | 8_3:-45109865 | Msa1290380:CDS |
| TGACATAACATAGGTTCTGC+AGG | 0.544476 | 8_3:-45109390 | Msa1290380:intron |
| AAGATAGAGGAATGCATTGG+TGG | 0.544867 | 8_3:-45108837 | Msa1290380:CDS |
| TTACCTGTGAAAATACTACT+AGG | 0.545707 | 8_3:+45111253 | None:intergenic |
| CAGACTCTACTATTTGTGGC+TGG | 0.549069 | 8_3:-45112042 | Msa1290380:CDS |
| TGTACACACACGCGCAAGAT+GGG | 0.549270 | 8_3:-45109238 | Msa1290380:intron |
| ACATTTCCTCCTCCCATCTG+AGG | 0.556933 | 8_3:+45112181 | None:intergenic |
| TTTCGTATGTATCAGGGAGT+GGG | 0.558832 | 8_3:-45110153 | Msa1290380:intron |
| GCATGGTCTAATTACACAGA+AGG | 0.559108 | 8_3:+45108736 | None:intergenic |
| GTTGGAGCTCCCCATTGAAA+GGG | 0.562774 | 8_3:+45110762 | None:intergenic |
| TATTCTCGGTGGCAATTGTG+TGG | 0.565953 | 8_3:-45111074 | Msa1290380:CDS |
| GTGCTTTCATTGCTGTGTCA+AGG | 0.567975 | 8_3:-45110352 | Msa1290380:CDS |
| TTGTATCTGTCTTGAATGAA+CGG | 0.569196 | 8_3:+45108806 | None:intergenic |
| AGCTCTCTAGTCCCTCAGAT+GGG | 0.572831 | 8_3:-45112193 | Msa1290380:CDS |
| CCACCTTCAGTTCTTAGCAG+AGG | 0.574616 | 8_3:-45110308 | Msa1290380:CDS |
| TACATTCCTCACATGATGAA+AGG | 0.578852 | 8_3:-45111129 | Msa1290380:CDS |
| CTAGTCCCTCAGATGGGAGG+AGG | 0.579586 | 8_3:-45112187 | Msa1290380:CDS |
| GAAGATAATGAGGGGAACAC+AGG | 0.579779 | 8_3:-45111779 | Msa1290380:CDS |
| GGTAATGTTGAAAACCAAGT+AGG | 0.581981 | 8_3:+45112248 | None:intergenic |
| TTCATTAGTTGCTCTAGTAG+AGG | 0.583871 | 8_3:-45110703 | Msa1290380:intron |
| AGTTGTTGGCACAAAAGTGT+AGG | 0.584640 | 8_3:+45111960 | None:intergenic |
| TTGATAATACATACCCACAT+AGG | 0.586210 | 8_3:+45109482 | None:intergenic |
| TGCGACAAACCAACCTCATG+AGG | 0.586478 | 8_3:+45111895 | None:intergenic |
| AGTAACTTACGCCATGGAGG+AGG | 0.587102 | 8_3:+45112694 | None:intergenic |
| AAGCTCTCTAGTCCCTCAGA+TGG | 0.588907 | 8_3:-45112194 | Msa1290380:CDS |
| GTATTACAAGTCCTCCTCCA+TGG | 0.592330 | 8_3:-45112705 | Msa1290380:CDS |
| GTGTATTCATTGAAATATTG+TGG | 0.597545 | 8_3:+45109282 | None:intergenic |
| ACACCTCTGCTAAGAACTGA+AGG | 0.598541 | 8_3:+45110305 | None:intergenic |
| AAGATAATGAGGGGAACACA+GGG | 0.601084 | 8_3:-45111778 | Msa1290380:CDS |
| GTTATCTGGAATCTTTGGGA+CGG | 0.603451 | 8_3:-45110124 | Msa1290380:CDS |
| CTCTTAGCTTTGACGCGTGT+AGG | 0.604171 | 8_3:-45109895 | Msa1290380:CDS |
| CCATGCAAGTTCCAAGAGCA+TGG | 0.606578 | 8_3:+45108719 | None:intergenic |
| GACTTTGGCGCAATGTAGTG+AGG | 0.608806 | 8_3:-45111708 | Msa1290380:intron |
| ATTATAGCTTGCAAAATGCG+TGG | 0.611240 | 8_3:-45111301 | Msa1290380:intron |
| CTAAAACACAAATTACATGT+AGG | 0.613818 | 8_3:-45111002 | Msa1290380:CDS |
| GTATGAATTTGGATTTCCTG+TGG | 0.614553 | 8_3:-45111419 | Msa1290380:intron |
| AAGCCTGAGAGAGCAACCAA+TGG | 0.615790 | 8_3:+45111448 | None:intergenic |
| TAGGATCCTCCAATAACCGC+AGG | 0.620528 | 8_3:+45111979 | None:intergenic |
| CCATGCTCTTGGAACTTGCA+TGG | 0.620546 | 8_3:-45108719 | Msa1290380:three_prime_UTR |
| CATGGTCTAATTACACAGAA+GGG | 0.621529 | 8_3:+45108737 | None:intergenic |
| AGATAGAGGAATGCATTGGT+GGG | 0.621819 | 8_3:-45108836 | Msa1290380:CDS |
| GACGCGTGTAGGTAGCCGCA+GGG | 0.622153 | 8_3:-45109884 | Msa1290380:CDS |
| GGAGCTCCAACATTTGATGC+TGG | 0.622188 | 8_3:-45110750 | Msa1290380:CDS |
| GTTCATTCAAGACAGATACA+AGG | 0.624734 | 8_3:-45108804 | Msa1290380:CDS |
| TATCTGGAATCTTTGGGACG+GGG | 0.626815 | 8_3:-45110122 | Msa1290380:CDS |
| ACCAATGGAACAGCAGAGAG+AGG | 0.631694 | 8_3:+45111463 | None:intergenic |
| GTAAAGATAGAGGAATGCAT+TGG | 0.632524 | 8_3:-45108840 | Msa1290380:CDS |
| ACATGTAGGACAGATCGTGC+CGG | 0.640862 | 8_3:-45110988 | Msa1290380:CDS |
| TCTCTAGTCCCTCAGATGGG+AGG | 0.650215 | 8_3:-45112190 | Msa1290380:CDS |
| CAGTTGTACCAAGCATCACA+AGG | 0.652446 | 8_3:+45112227 | None:intergenic |
| ATTTGCAGTTATATTCTCGG+TGG | 0.660016 | 8_3:-45111085 | Msa1290380:CDS |
| ATTTGGAACTCGTCTACCTG+CGG | 0.665975 | 8_3:-45111995 | Msa1290380:CDS |
| CCTCTGCTAAGAACTGAAGG+TGG | 0.671195 | 8_3:+45110308 | None:intergenic |
| GATCGTGCCGGAATTATAGG+TGG | 0.686788 | 8_3:-45110976 | Msa1290380:CDS |
| AAATTTGAGAAGATAATGAG+GGG | 0.699765 | 8_3:-45111787 | Msa1290380:CDS |
| TGACATTGTGAATCCTCATG+AGG | 0.715159 | 8_3:-45111908 | Msa1290380:intron |
| TTAAGTAACTTACGCCATGG+AGG | 0.719479 | 8_3:+45112691 | None:intergenic |
| GTCCCGTATCCCTTTCAATG+GGG | 0.733559 | 8_3:-45110771 | Msa1290380:CDS |
| CCGATATTTGAACAACCCTG+CGG | 0.758567 | 8_3:+45109869 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATTATTTAAATTTCA+AGG | + | chr8_3:45110146-45110165 | None:intergenic | 10.0% |
| !! | GTTATAATTATAAAACATAT+GGG | + | chr8_3:45110377-45110396 | None:intergenic | 10.0% |
| !! | TATTATCAATTTAAATAAGT+TGG | - | chr8_3:45112264-45112283 | Msa1290380:intron | 10.0% |
| !! | TTATATTGCATAAAAATTAA+AGG | + | chr8_3:45112533-45112552 | None:intergenic | 10.0% |
| !! | TAAGTTCATAATAAGAAAAA+TGG | - | chr8_3:45108920-45108939 | Msa1290380:CDS | 15.0% |
| !! | TGGTTATTAATATTATTGTT+TGG | - | chr8_3:45109608-45109627 | Msa1290380:intron | 15.0% |
| !! | AATTTCAAAAAAATGTATGT+TGG | - | chr8_3:45110158-45110177 | Msa1290380:intron | 15.0% |
| !! | CGTTATAATTATAAAACATA+TGG | + | chr8_3:45110378-45110397 | None:intergenic | 15.0% |
| !! | TACTATATATAGATGAAATA+TGG | + | chr8_3:45110534-45110553 | None:intergenic | 15.0% |
| !!! | AGGTATATTTATTGTTATTT+TGG | - | chr8_3:45111049-45111068 | Msa1290380:CDS | 15.0% |
| !! | AATTCTATGTAACATAATAT+TGG | - | chr8_3:45111790-45111809 | Msa1290380:CDS | 15.0% |
| !! | ACCACTAAAAAAAATAAAAA+TGG | - | chr8_3:45111991-45112010 | Msa1290380:CDS | 15.0% |
| !!! | TCCATTTTTATTTTTTTTAG+TGG | + | chr8_3:45111995-45112014 | None:intergenic | 15.0% |
| !! | AATATATATGTAGGAAAATT+TGG | - | chr8_3:45112168-45112187 | Msa1290380:intron | 15.0% |
| !! | TAATATTGATATTTCATTCA+AGG | - | chr8_3:45112292-45112311 | Msa1290380:intron | 15.0% |
| !!! | TTTTTGTTTTTCTTCTCTAA+GGG | - | chr8_3:45108697-45108716 | Msa1290380:three_prime_UTR | 20.0% |
| !! | GTAATACAATAAGAAACATT+TGG | + | chr8_3:45109014-45109033 | None:intergenic | 20.0% |
| !!! | AAGTTACTTAACTTTTTCAT+TGG | - | chr8_3:45109053-45109072 | Msa1290380:intron | 20.0% |
| !!! | AACCATTTTGAGTATATTTT+TGG | - | chr8_3:45109076-45109095 | Msa1290380:intron | 20.0% |
| !!! | TTACTTCCATTTTTTCAAAT+CGG | + | chr8_3:45109238-45109257 | None:intergenic | 20.0% |
| !! | AAAATAATCGAAATAGTTGT+TGG | + | chr8_3:45109789-45109808 | None:intergenic | 20.0% |
| !!! | AACAACTATTTCGATTATTT+TGG | - | chr8_3:45109788-45109807 | Msa1290380:intron | 20.0% |
| !! | TTCATGAATATGATAATATG+AGG | + | chr8_3:45110216-45110235 | None:intergenic | 20.0% |
| !!! | AATTCTATGTATTTTTGTTC+AGG | - | chr8_3:45110237-45110256 | Msa1290380:intron | 20.0% |
| !!! | ATCTGTTTTATATTTAGAGT+CGG | + | chr8_3:45111183-45111202 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTCTAATAGAGT+AGG | - | chr8_3:45111767-45111786 | Msa1290380:CDS | 20.0% |
| !! | ATGGATCATAATATATATGT+AGG | - | chr8_3:45112159-45112178 | Msa1290380:intron | 20.0% |
| !!! | TTTTTATGTTGACATAACAT+AGG | - | chr8_3:45112333-45112352 | Msa1290380:intron | 20.0% |
| !! | TGTTTAAATTGCAAAATTGA+AGG | + | chr8_3:45112377-45112396 | None:intergenic | 20.0% |
| !!! | TTTAGAACAAAATTCATCTT+AGG | - | chr8_3:45112399-45112418 | Msa1290380:intron | 20.0% |
| !!! | AAAAACTTGTTTAGATTGAA+AGG | + | chr8_3:45112975-45112994 | None:intergenic | 20.0% |
| ! | AAACAAGAAGTCAAGTTTAA+GGG | + | chr8_3:45108645-45108664 | None:intergenic | 25.0% |
| ! | TGAATAATTTCTTCACTCTT+GGG | + | chr8_3:45108674-45108693 | None:intergenic | 25.0% |
| ! | ATGAATAATTTCTTCACTCT+TGG | + | chr8_3:45108675-45108694 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTTTTCTTCTCTA+AGG | - | chr8_3:45108696-45108715 | Msa1290380:three_prime_UTR | 25.0% |
| !!! | TTGCATAGTAACTATTTTTG+AGG | - | chr8_3:45108805-45108824 | Msa1290380:CDS | 25.0% |
| ! | TTCATAATAAGAAAAATGGC+AGG | - | chr8_3:45108924-45108943 | Msa1290380:CDS | 25.0% |
| !! | TTTGGTAATTGATCTTTAAC+CGG | + | chr8_3:45108996-45109015 | None:intergenic | 25.0% |
| ! | AGCCAAAAATATACTCAAAA+TGG | + | chr8_3:45109081-45109100 | None:intergenic | 25.0% |
| !!! | ATTTTTTCAAATCGGTGTTT+AGG | + | chr8_3:45109230-45109249 | None:intergenic | 25.0% |
| !!! | TAAACACCGATTTGAAAAAA+TGG | - | chr8_3:45109229-45109248 | Msa1290380:intron | 25.0% |
| ! | AGAATAGTTTAGCAAATTGA+AGG | - | chr8_3:45109368-45109387 | Msa1290380:CDS | 25.0% |
| ! | AGTCTTAGAATCAATCTAAA+AGG | - | chr8_3:45109575-45109594 | Msa1290380:intron | 25.0% |
| ! | TTGGTTCATAAATCTAATGA+AGG | - | chr8_3:45109627-45109646 | Msa1290380:intron | 25.0% |
| !! | ACATTTTTCCAAACAACATT+TGG | - | chr8_3:45109720-45109739 | Msa1290380:intron | 25.0% |
| ! | AGAAATTTGAGAAGATAATG+AGG | - | chr8_3:45109943-45109962 | Msa1290380:intron | 25.0% |
| ! | GAAATTTGAGAAGATAATGA+GGG | - | chr8_3:45109944-45109963 | Msa1290380:intron | 25.0% |
| ! | AAATTTGAGAAGATAATGAG+GGG | - | chr8_3:45109945-45109964 | Msa1290380:intron | 25.0% |
| ! | AAACATATGGGAAGAAAATA+AGG | + | chr8_3:45110365-45110384 | None:intergenic | 25.0% |
| !!! | CTACATGTAATTTGTGTTTT+AGG | + | chr8_3:45110732-45110751 | None:intergenic | 25.0% |
| ! | CTAAAACACAAATTACATGT+AGG | - | chr8_3:45110730-45110749 | Msa1290380:CDS | 25.0% |
| !!! | TTATTTTGTAAGCATCTGTT+TGG | + | chr8_3:45110925-45110944 | None:intergenic | 25.0% |
| !! | GCTTACAAAATAAATTTTGC+AGG | - | chr8_3:45110932-45110951 | Msa1290380:intron | 25.0% |
| !!! | TCTGTTTTATATTTAGAGTC+GGG | + | chr8_3:45111182-45111201 | None:intergenic | 25.0% |
| ! | AAGTGAAAACAAAAAATGCA+TGG | + | chr8_3:45111494-45111513 | None:intergenic | 25.0% |
| !!! | ATTGTTATTTCGTATGTATC+AGG | - | chr8_3:45111572-45111591 | Msa1290380:intron | 25.0% |
| !!! | TTGTTATTTCGTATGTATCA+GGG | - | chr8_3:45111573-45111592 | Msa1290380:intron | 25.0% |
| !! | ATAATGTTATCTGGAATCTT+TGG | - | chr8_3:45111603-45111622 | Msa1290380:intron | 25.0% |
| !! | TAATGTTATCTGGAATCTTT+GGG | - | chr8_3:45111604-45111623 | Msa1290380:intron | 25.0% |
| !! | ATAATTTCATGTTATTTGCG+AGG | - | chr8_3:45111671-45111690 | Msa1290380:intron | 25.0% |
| ! | ACATAAAAAATCCTAATGTG+CGG | + | chr8_3:45111728-45111747 | None:intergenic | 25.0% |
| !! | ATGATCTTTTTCTCAATTCT+TGG | - | chr8_3:45111894-45111913 | Msa1290380:intron | 25.0% |
| ! | GTGTATTCATTGAAATATTG+TGG | + | chr8_3:45112453-45112472 | None:intergenic | 25.0% |
| ! | TGTAAAATTGTCAAATGCAA+TGG | + | chr8_3:45112578-45112597 | None:intergenic | 25.0% |
| !! | GAGTTATTCTTTGTTTACAT+CGG | + | chr8_3:45112667-45112686 | None:intergenic | 25.0% |
| ! | AATTTGAATCTCTAGTTGAA+AGG | + | chr8_3:45112718-45112737 | None:intergenic | 25.0% |
| ! | AAAGGAACAAATATTTGTCA+AGG | + | chr8_3:45112763-45112782 | None:intergenic | 25.0% |
| CAAACAAGAAGTCAAGTTTA+AGG | + | chr8_3:45108646-45108665 | None:intergenic | 30.0% | |
| ATAATAAGAAAAATGGCAGG+AGG | - | chr8_3:45108927-45108946 | Msa1290380:CDS | 30.0% | |
| !!! | ACATCTTTTGGAACATTACA+TGG | - | chr8_3:45109131-45109150 | Msa1290380:intron | 30.0% |
| TCAAGAGTAAACTTTCTGTT+TGG | - | chr8_3:45109159-45109178 | Msa1290380:intron | 30.0% | |
| ! | CTTTTATGTTAATGAAGCTG+AGG | - | chr8_3:45109457-45109476 | Msa1290380:intron | 30.0% |
| !!! | ACTATTTCGATTATTTTGGC+TGG | - | chr8_3:45109792-45109811 | Msa1290380:intron | 30.0% |
| !! | AAGTGTTGAAGCAACTATAA+GGG | + | chr8_3:45109982-45110001 | None:intergenic | 30.0% |
| TCAACACTTCAAATTGTTCT+TGG | - | chr8_3:45109993-45110012 | Msa1290380:intron | 30.0% | |
| ATGATCAAGTGGTTTAGATA+GGG | + | chr8_3:45110062-45110081 | None:intergenic | 30.0% | |
| AATGATCAAGTGGTTTAGAT+AGG | + | chr8_3:45110063-45110082 | None:intergenic | 30.0% | |
| TCATCACGAATTTAGTACAT+AGG | - | chr8_3:45110111-45110130 | Msa1290380:CDS | 30.0% | |
| TTACCTGTGAAAATACTACT+AGG | + | chr8_3:45110482-45110501 | None:intergenic | 30.0% | |
| ACATGATGTTAGTAGATGAA+AGG | + | chr8_3:45110575-45110594 | None:intergenic | 30.0% | |
| ! | TCGATTTGCAGTTATATTCT+CGG | - | chr8_3:45110644-45110663 | Msa1290380:intron | 30.0% |
| TATGCTTATCTTCTTACTGT+TGG | - | chr8_3:45110684-45110703 | Msa1290380:intron | 30.0% | |
| AGTTTATAGATGAGAGCTTA+TGG | + | chr8_3:45110834-45110853 | None:intergenic | 30.0% | |
| AACAAACTACAATAGACACT+CGG | + | chr8_3:45111242-45111261 | None:intergenic | 30.0% | |
| AAAAAATGCATGGTTAGTGA+AGG | + | chr8_3:45111484-45111503 | None:intergenic | 30.0% | |
| !! | TCTTGGTAAGATTTTAATGC+TGG | - | chr8_3:45111911-45111930 | Msa1290380:CDS | 30.0% |
| ATGTGTAAGTTTCACTATCA+TGG | + | chr8_3:45112033-45112052 | None:intergenic | 30.0% | |
| ! | TGATAGTGAAACTTACACAT+CGG | - | chr8_3:45112033-45112052 | Msa1290380:CDS | 30.0% |
| ! | CTTTGTTTGATGTTTCTTGT+TGG | - | chr8_3:45112115-45112134 | Msa1290380:intron | 30.0% |
| TTGAACCTAAAAAGTTGTGA+TGG | - | chr8_3:45112140-45112159 | Msa1290380:intron | 30.0% | |
| ! | ATGATCCATCACAACTTTTT+AGG | + | chr8_3:45112148-45112167 | None:intergenic | 30.0% |
| CAATATAAAGCTGCAACTAT+TGG | + | chr8_3:45112219-45112238 | None:intergenic | 30.0% | |
| ! | TTGATAATACATACCCACAT+AGG | + | chr8_3:45112253-45112272 | None:intergenic | 30.0% |
| TATAGAGAATCCCATGAAAA+TGG | + | chr8_3:45112430-45112449 | None:intergenic | 30.0% | |
| TACACAGCATTTAAAAGCTA+TGG | - | chr8_3:45112468-45112487 | Msa1290380:intron | 30.0% | |
| TCAAATGCAATGGTTAATGT+AGG | + | chr8_3:45112568-45112587 | None:intergenic | 30.0% | |
| CAAAAACATTGCCAATAAAC+TGG | + | chr8_3:45112838-45112857 | None:intergenic | 30.0% | |
| ! | CAGTTTATTGGCAATGTTTT+TGG | - | chr8_3:45112836-45112855 | Msa1290380:five_prime_UTR | 30.0% |
| AATCAAACACGTAAAGATAG+AGG | - | chr8_3:45112882-45112901 | Msa1290380:five_prime_UTR | 30.0% | |
| TTGTATCTGTCTTGAATGAA+CGG | + | chr8_3:45112929-45112948 | None:intergenic | 30.0% | |
| TGAGGTTGAGAAATTGATGT+AGG | - | chr8_3:45108823-45108842 | Msa1290380:CDS | 35.0% | |
| GAGGTTGAGAAATTGATGTA+GGG | - | chr8_3:45108824-45108843 | Msa1290380:CDS | 35.0% | |
| !! | GTTCTCAGAAGTTTGAGTTT+TGG | - | chr8_3:45108888-45108907 | Msa1290380:CDS | 35.0% |
| AATTGATCTTTAACCGGATG+TGG | + | chr8_3:45108990-45109009 | None:intergenic | 35.0% | |
| AAGTTAAGTAACTTACGCCA+TGG | + | chr8_3:45109047-45109066 | None:intergenic | 35.0% | |
| AAGATGTGATATGAGGAAGA+AGG | + | chr8_3:45109118-45109137 | None:intergenic | 35.0% | |
| ! | CTTCCTCATATCACATCTTT+TGG | - | chr8_3:45109119-45109138 | Msa1290380:intron | 35.0% |
| GTTCCAAAAGATGTGATATG+AGG | + | chr8_3:45109125-45109144 | None:intergenic | 35.0% | |
| !! | ATTTGGTGTCTATGCTTCAT+AGG | + | chr8_3:45109193-45109212 | None:intergenic | 35.0% |
| GGTAATGTTGAAAACCAAGT+AGG | + | chr8_3:45109487-45109506 | None:intergenic | 35.0% | |
| ATCTAAAAGGAAGAAGCAAG+TGG | - | chr8_3:45109588-45109607 | Msa1290380:intron | 35.0% | |
| AGGCTCAATCATGATTCAAT+AGG | - | chr8_3:45109647-45109666 | Msa1290380:intron | 35.0% | |
| GATTCAGACTCTACTATTTG+TGG | - | chr8_3:45109686-45109705 | Msa1290380:intron | 35.0% | |
| !! | GAAGTGTTGAAGCAACTATA+AGG | + | chr8_3:45109983-45110002 | None:intergenic | 35.0% |
| !! | CAAATTGTTCTTGGCTTTAG+TGG | - | chr8_3:45110002-45110021 | Msa1290380:intron | 35.0% |
| GAAAGAGCAAAATGATCAAG+TGG | + | chr8_3:45110073-45110092 | None:intergenic | 35.0% | |
| GTATGAATTTGGATTTCCTG+TGG | - | chr8_3:45110313-45110332 | Msa1290380:CDS | 35.0% | |
| ! | ATTATAGCTTGCAAAATGCG+TGG | - | chr8_3:45110431-45110450 | Msa1290380:intron | 35.0% |
| ACTACTAGGATGATGATTTC+TGG | + | chr8_3:45110468-45110487 | None:intergenic | 35.0% | |
| ! | CATCCTAGTAGTATTTTCAC+AGG | - | chr8_3:45110476-45110495 | Msa1290380:intron | 35.0% |
| TACATTCCTCACATGATGAA+AGG | - | chr8_3:45110603-45110622 | Msa1290380:intron | 35.0% | |
| ! | TTTTCTCCTTTCATCATGTG+AGG | + | chr8_3:45110612-45110631 | None:intergenic | 35.0% |
| ACTGCAAATCGATCAAAGAT+AGG | + | chr8_3:45110636-45110655 | None:intergenic | 35.0% | |
| ATTTGCAGTTATATTCTCGG+TGG | - | chr8_3:45110647-45110666 | Msa1290380:intron | 35.0% | |
| TTTCAACTTAGTCCTTACCA+AGG | + | chr8_3:45110786-45110805 | None:intergenic | 35.0% | |
| GCGTATCTGAGTTTATCTAT+TGG | + | chr8_3:45110898-45110917 | None:intergenic | 35.0% | |
| !! | TGGTGAAACTTTTGCTATGA+TGG | - | chr8_3:45111002-45111021 | Msa1290380:CDS | 35.0% |
| TTCATTAGTTGCTCTAGTAG+AGG | - | chr8_3:45111029-45111048 | Msa1290380:CDS | 35.0% | |
| ! | TCACAACTACATGAGCTTTT+AGG | + | chr8_3:45111122-45111141 | None:intergenic | 35.0% |
| AGCTCATATACACTGATAAG+TGG | + | chr8_3:45111308-45111327 | None:intergenic | 35.0% | |
| ! | CAGAGTATTAGATGCAACAA+AGG | + | chr8_3:45111335-45111354 | None:intergenic | 35.0% |
| ! | TTTTATGTCTGCGACTGTAA+TGG | - | chr8_3:45111740-45111759 | Msa1290380:CDS | 35.0% |
| ! | TTTTTCTTCAGAGAGAATGC+AGG | - | chr8_3:45111813-45111832 | Msa1290380:intron | 35.0% |
| !!! | TTTTAGTGGTGTTGATGTGT+CGG | + | chr8_3:45111981-45112000 | None:intergenic | 35.0% |
| ! | TTAGGCTTCTCCATTTTCAT+GGG | - | chr8_3:45112417-45112436 | Msa1290380:intron | 35.0% |
| CATGTCATTGAACTGTCAAA+AGG | + | chr8_3:45112781-45112800 | None:intergenic | 35.0% | |
| CAAATGCTTCTGATGCAAAT+GGG | + | chr8_3:45112812-45112831 | None:intergenic | 35.0% | |
| ACAAATGCTTCTGATGCAAA+TGG | + | chr8_3:45112813-45112832 | None:intergenic | 35.0% | |
| ! | AGCATTTGTTGCCAGTTTAT+TGG | - | chr8_3:45112824-45112843 | Msa1290380:five_prime_UTR | 35.0% |
| GTAAAGATAGAGGAATGCAT+TGG | - | chr8_3:45112892-45112911 | Msa1290380:five_prime_UTR | 35.0% | |
| GTTCATTCAAGACAGATACA+AGG | - | chr8_3:45112928-45112947 | Msa1290380:five_prime_UTR | 35.0% | |
| CATGGTCTAATTACACAGAA+GGG | + | chr8_3:45112998-45113017 | None:intergenic | 35.0% | |
| ! | ATCTAGTTTCGTGTCTCTGT+CGG | - | chr8_3:45108780-45108799 | Msa1290380:CDS | 40.0% |
| ATAAGAAAAATGGCAGGAGG+TGG | - | chr8_3:45108930-45108949 | Msa1290380:CDS | 40.0% | |
| !! | AGTTCATCTAGCTTTGGTTG+TGG | + | chr8_3:45108963-45108982 | None:intergenic | 40.0% |
| ! | GGAAGAAGTTCATCTAGCTT+TGG | + | chr8_3:45108969-45108988 | None:intergenic | 40.0% |
| AGATGAACTTCTTCCACATC+CGG | - | chr8_3:45108974-45108993 | Msa1290380:intron | 40.0% | |
| TTAAGTAACTTACGCCATGG+AGG | + | chr8_3:45109044-45109063 | None:intergenic | 40.0% | |
| ATGTGATATGAGGAAGAAGG+AGG | + | chr8_3:45109115-45109134 | None:intergenic | 40.0% | |
| GTCTATGCTTCATAGGTCTA+CGG | + | chr8_3:45109186-45109205 | None:intergenic | 40.0% | |
| AGGTGTCAGTGTCTTGTATT+TGG | + | chr8_3:45109210-45109229 | None:intergenic | 40.0% | |
| CAACATTACCTTGTGATGCT+TGG | - | chr8_3:45109497-45109516 | Msa1290380:CDS | 40.0% | |
| GACGAGTTCCAAATGTTGTT+TGG | + | chr8_3:45109731-45109750 | None:intergenic | 40.0% | |
| ! | AGTTGTTGGCACAAAAGTGT+AGG | + | chr8_3:45109775-45109794 | None:intergenic | 40.0% |
| TGACATTGTGAATCCTCATG+AGG | - | chr8_3:45109824-45109843 | Msa1290380:intron | 40.0% | |
| ATTGTGAATCCTCATGAGGT+TGG | - | chr8_3:45109828-45109847 | Msa1290380:intron | 40.0% | |
| AAGATAATGAGGGGAACACA+GGG | - | chr8_3:45109954-45109973 | Msa1290380:intron | 40.0% | |
| !! | TTCTTGGCTTTAGTGGACTT+TGG | - | chr8_3:45110009-45110028 | Msa1290380:intron | 40.0% |
| !! | GGCTTTGGACTGTATGAATT+TGG | - | chr8_3:45110302-45110321 | Msa1290380:CDS | 40.0% |
| GTTGCAAATATGCATACCAC+AGG | + | chr8_3:45110332-45110351 | None:intergenic | 40.0% | |
| CTTGCAAAATGCGTGGAAAT+TGG | - | chr8_3:45110438-45110457 | Msa1290380:intron | 40.0% | |
| GCTTATCTTCTTACTGTTGG+TGG | - | chr8_3:45110687-45110706 | Msa1290380:intron | 40.0% | |
| GTTTCACCAGCATCAAATGT+TGG | + | chr8_3:45110991-45111010 | None:intergenic | 40.0% | |
| TTTCTTGTTCCACAGTCAAC+AGG | - | chr8_3:45111358-45111377 | Msa1290380:intron | 40.0% | |
| CTAAGAACTGAAGGTGGAAT+TGG | + | chr8_3:45111421-45111440 | None:intergenic | 40.0% | |
| ATTTCGTATGTATCAGGGAG+TGG | - | chr8_3:45111578-45111597 | Msa1290380:intron | 40.0% | |
| TTTCGTATGTATCAGGGAGT+GGG | - | chr8_3:45111579-45111598 | Msa1290380:intron | 40.0% | |
| GGAGTGGGAATAATGTTATC+TGG | - | chr8_3:45111594-45111613 | Msa1290380:intron | 40.0% | |
| ! | GTTATCTGGAATCTTTGGGA+CGG | - | chr8_3:45111608-45111627 | Msa1290380:intron | 40.0% |
| !! | TTATCTGGAATCTTTGGGAC+GGG | - | chr8_3:45111609-45111628 | Msa1290380:intron | 40.0% |
| GGATCATCAGTTTCTGTGTA+AGG | - | chr8_3:45111636-45111655 | Msa1290380:intron | 40.0% | |
| ACAAAGCACACTAGAACTGT+CGG | + | chr8_3:45112101-45112120 | None:intergenic | 40.0% | |
| ! | TTGCCTTTTCTTTGCCTATG+TGG | - | chr8_3:45112236-45112255 | Msa1290380:CDS | 40.0% |
| ! | TGCCTTTTCTTTGCCTATGT+GGG | - | chr8_3:45112237-45112256 | Msa1290380:CDS | 40.0% |
| TACCCACATAGGCAAAGAAA+AGG | + | chr8_3:45112242-45112261 | None:intergenic | 40.0% | |
| TGACATAACATAGGTTCTGC+AGG | - | chr8_3:45112342-45112361 | Msa1290380:intron | 40.0% | |
| ! | CTTAGGCTTCTCCATTTTCA+TGG | - | chr8_3:45112416-45112435 | Msa1290380:intron | 40.0% |
| CAATGGTTAATGTAGGACGA+AGG | + | chr8_3:45112561-45112580 | None:intergenic | 40.0% | |
| AAGATAGAGGAATGCATTGG+TGG | - | chr8_3:45112895-45112914 | Msa1290380:five_prime_UTR | 40.0% | |
| ! | AGATAGAGGAATGCATTGGT+GGG | - | chr8_3:45112896-45112915 | Msa1290380:five_prime_UTR | 40.0% |
| GCATGGTCTAATTACACAGA+AGG | + | chr8_3:45112999-45113018 | None:intergenic | 40.0% | |
| GTGTAATTAGACCATGCTCT+TGG | - | chr8_3:45113002-45113021 | Msa1290380:five_prime_UTR | 40.0% | |
| GTATTACAAGTCCTCCTCCA+TGG | - | chr8_3:45109027-45109046 | Msa1290380:intron | 45.0% | |
| CAGTTGTACCAAGCATCACA+AGG | + | chr8_3:45109508-45109527 | None:intergenic | 45.0% | |
| CAGACTCTACTATTTGTGGC+TGG | - | chr8_3:45109690-45109709 | Msa1290380:intron | 45.0% | |
| ! | ATTTGGAACTCGTCTACCTG+CGG | - | chr8_3:45109737-45109756 | Msa1290380:intron | 45.0% |
| GAAGATAATGAGGGGAACAC+AGG | - | chr8_3:45109953-45109972 | Msa1290380:intron | 45.0% | |
| !! | GACTCTCGCTCTTTTGATTG+TGG | - | chr8_3:45110401-45110420 | Msa1290380:intron | 45.0% |
| TATTCTCGGTGGCAATTGTG+TGG | - | chr8_3:45110658-45110677 | Msa1290380:intron | 45.0% | |
| ACAGATCGTGCCGGAATTAT+AGG | - | chr8_3:45110753-45110772 | Msa1290380:CDS | 45.0% | |
| !! | AGGAGCACCACCTATAATTC+CGG | + | chr8_3:45110766-45110785 | None:intergenic | 45.0% |
| GAATTATAGGTGGTGCTCCT+TGG | - | chr8_3:45110766-45110785 | Msa1290380:CDS | 45.0% | |
| AGTCCCGTATCCCTTTCAAT+GGG | - | chr8_3:45110960-45110979 | Msa1290380:intron | 45.0% | |
| TACAATAGACACTCGGCTCT+CGG | + | chr8_3:45111235-45111254 | None:intergenic | 45.0% | |
| !! | ATGAAAGCACCTGTTGACTG+TGG | + | chr8_3:45111370-45111389 | None:intergenic | 45.0% |
| GTGCTTTCATTGCTGTGTCA+AGG | - | chr8_3:45111380-45111399 | Msa1290380:intron | 45.0% | |
| ACACCTCTGCTAAGAACTGA+AGG | + | chr8_3:45111430-45111449 | None:intergenic | 45.0% | |
| ! | TCAGTTCTTAGCAGAGGTGT+AGG | - | chr8_3:45111430-45111449 | Msa1290380:CDS | 45.0% |
| ! | TTCTTAGCAGAGGTGTAGGT+TGG | - | chr8_3:45111434-45111453 | Msa1290380:CDS | 45.0% |
| !! | TATCTGGAATCTTTGGGACG+GGG | - | chr8_3:45111610-45111629 | Msa1290380:intron | 45.0% |
| CCGATATTTGAACAACCCTG+CGG | + | chr8_3:45111866-45111885 | None:intergenic | 45.0% | |
| CCGCAGGGTTGTTCAAATAT+CGG | - | chr8_3:45111863-45111882 | Msa1290380:intron | 45.0% | |
| AGGGTTGTTCAAATATCGGC+TGG | - | chr8_3:45111867-45111886 | Msa1290380:intron | 45.0% | |
| AAAGCTGCAACTATTGGTGC+TGG | + | chr8_3:45112213-45112232 | None:intergenic | 45.0% | |
| CATCGGTCTCTCTAGTTGAA+AGG | + | chr8_3:45112650-45112669 | None:intergenic | 45.0% | |
| AGTAACTTACGCCATGGAGG+AGG | + | chr8_3:45109041-45109060 | None:intergenic | 50.0% | |
| GAAGCTGAGGCAATCCTACT+TGG | - | chr8_3:45109470-45109489 | Msa1290380:intron | 50.0% | |
| ATCTGAGGGACTAGAGAGCT+TGG | + | chr8_3:45109539-45109558 | None:intergenic | 50.0% | |
| AAGCTCTCTAGTCCCTCAGA+TGG | - | chr8_3:45109538-45109557 | Msa1290380:CDS | 50.0% | |
| AGCTCTCTAGTCCCTCAGAT+GGG | - | chr8_3:45109539-45109558 | Msa1290380:CDS | 50.0% | |
| CATTTCCTCCTCCCATCTGA+GGG | + | chr8_3:45109553-45109572 | None:intergenic | 50.0% | |
| ACATTTCCTCCTCCCATCTG+AGG | + | chr8_3:45109554-45109573 | None:intergenic | 50.0% | |
| ACTCGTCTACCTGCGGTTAT+TGG | - | chr8_3:45109744-45109763 | Msa1290380:intron | 50.0% | |
| TAGGATCCTCCAATAACCGC+AGG | + | chr8_3:45109756-45109775 | None:intergenic | 50.0% | |
| TGCGACAAACCAACCTCATG+AGG | + | chr8_3:45109840-45109859 | None:intergenic | 50.0% | |
| GACTTTGGCGCAATGTAGTG+AGG | - | chr8_3:45110024-45110043 | Msa1290380:intron | 50.0% | |
| TCCTCTCTCTGCTGTTCCAT+TGG | - | chr8_3:45110268-45110287 | Msa1290380:intron | 50.0% | |
| ACCAATGGAACAGCAGAGAG+AGG | + | chr8_3:45110272-45110291 | None:intergenic | 50.0% | |
| ! | GTTCCATTGGTTGCTCTCTC+AGG | - | chr8_3:45110281-45110300 | Msa1290380:intron | 50.0% |
| AAGCCTGAGAGAGCAACCAA+TGG | + | chr8_3:45110287-45110306 | None:intergenic | 50.0% | |
| TTGGTTGCTCTCTCAGGCTT+TGG | - | chr8_3:45110287-45110306 | Msa1290380:intron | 50.0% | |
| ACATGTAGGACAGATCGTGC+CGG | - | chr8_3:45110744-45110763 | Msa1290380:CDS | 50.0% | |
| GATCGTGCCGGAATTATAGG+TGG | - | chr8_3:45110756-45110775 | Msa1290380:CDS | 50.0% | |
| ATAGGTGGTGCTCCTTGGTA+AGG | - | chr8_3:45110771-45110790 | Msa1290380:CDS | 50.0% | |
| GAGTCCCGTATCCCTTTCAA+TGG | - | chr8_3:45110959-45110978 | Msa1290380:intron | 50.0% | |
| GTCCCGTATCCCTTTCAATG+GGG | - | chr8_3:45110961-45110980 | Msa1290380:intron | 50.0% | |
| CTCCCCATTGAAAGGGATAC+GGG | + | chr8_3:45110966-45110985 | None:intergenic | 50.0% | |
| GCTCCCCATTGAAAGGGATA+CGG | + | chr8_3:45110967-45110986 | None:intergenic | 50.0% | |
| GTTGGAGCTCCCCATTGAAA+GGG | + | chr8_3:45110973-45110992 | None:intergenic | 50.0% | |
| TGTTGGAGCTCCCCATTGAA+AGG | + | chr8_3:45110974-45110993 | None:intergenic | 50.0% | |
| GGAGCTCCAACATTTGATGC+TGG | - | chr8_3:45110982-45111001 | Msa1290380:CDS | 50.0% | |
| CCTCTGCTAAGAACTGAAGG+TGG | + | chr8_3:45111427-45111446 | None:intergenic | 50.0% | |
| CCACCTTCAGTTCTTAGCAG+AGG | - | chr8_3:45111424-45111443 | Msa1290380:CDS | 50.0% | |
| CTAATGTGCGGCTGAAGTGA+GGG | + | chr8_3:45111716-45111735 | None:intergenic | 50.0% | |
| !! | CTCTTAGCTTTGACGCGTGT+AGG | - | chr8_3:45111837-45111856 | Msa1290380:intron | 50.0% |
| TGTACACACACGCGCAAGAT+GGG | - | chr8_3:45112494-45112513 | Msa1290380:intron | 50.0% | |
| CCATGCAAGTTCCAAGAGCA+TGG | + | chr8_3:45113016-45113035 | None:intergenic | 50.0% | |
| CCATGCTCTTGGAACTTGCA+TGG | - | chr8_3:45113013-45113032 | Msa1290380:five_prime_UTR | 50.0% | |
| TCTCTAGTCCCTCAGATGGG+AGG | - | chr8_3:45109542-45109561 | Msa1290380:CDS | 55.0% | |
| CGTCTACCTGCGGTTATTGG+AGG | - | chr8_3:45109747-45109766 | Msa1290380:intron | 55.0% | |
| ! | TAGCAGAGGTGTAGGTTGGC+AGG | - | chr8_3:45111438-45111457 | Msa1290380:CDS | 55.0% |
| !! | GGAATCTTTGGGACGGGGAA+TGG | - | chr8_3:45111615-45111634 | Msa1290380:intron | 55.0% |
| CCTAATGTGCGGCTGAAGTG+AGG | + | chr8_3:45111717-45111736 | None:intergenic | 55.0% | |
| CCTCACTTCAGCCGCACATT+AGG | - | chr8_3:45111714-45111733 | Msa1290380:CDS | 55.0% | |
| CATCTTGCGCGTGTGTGTAC+AGG | + | chr8_3:45112495-45112514 | None:intergenic | 55.0% | |
| CTGTACACACACGCGCAAGA+TGG | - | chr8_3:45112493-45112512 | Msa1290380:intron | 55.0% | |
| CTAGTCCCTCAGATGGGAGG+AGG | - | chr8_3:45109545-45109564 | Msa1290380:CDS | 60.0% | |
| GTGGATAGACACTCGAGCGC+AGG | + | chr8_3:45111289-45111308 | None:intergenic | 60.0% | |
| TGACGCGTGTAGGTAGCCGC+AGG | - | chr8_3:45111847-45111866 | Msa1290380:intron | 65.0% | |
| GACGCGTGTAGGTAGCCGCA+GGG | - | chr8_3:45111848-45111867 | Msa1290380:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 45108598 | 45113156 | 45108598 | ID=Msa1290380;Name=Msa1290380 |
| chr8_3 | mRNA | 45108598 | 45113156 | 45108598 | ID=Msa1290380-mRNA-1;Parent=Msa1290380;Name=Msa1290380-mRNA-1;_AED=0.15;_eAED=0.15;_QI=341|1|1|1|1|1|14|149|533 |
| chr8_3 | exon | 45108598 | 45108965 | 45108598 | ID=Msa1290380-mRNA-1:exon:12477;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45109239 | 45109399 | 45109239 | ID=Msa1290380-mRNA-1:exon:12476;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45109496 | 45109573 | 45109496 | ID=Msa1290380-mRNA-1:exon:12475;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45109839 | 45109930 | 45109839 | ID=Msa1290380-mRNA-1:exon:12474;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45110102 | 45110160 | 45110102 | ID=Msa1290380-mRNA-1:exon:12473;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45110295 | 45110381 | 45110295 | ID=Msa1290380-mRNA-1:exon:12472;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45110704 | 45110800 | 45110704 | ID=Msa1290380-mRNA-1:exon:12471;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45110967 | 45111151 | 45110967 | ID=Msa1290380-mRNA-1:exon:12470;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45111257 | 45111316 | 45111257 | ID=Msa1290380-mRNA-1:exon:12469;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45111420 | 45111495 | 45111420 | ID=Msa1290380-mRNA-1:exon:12468;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45111709 | 45111809 | 45111709 | ID=Msa1290380-mRNA-1:exon:12467;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45111909 | 45112085 | 45111909 | ID=Msa1290380-mRNA-1:exon:12466;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45112183 | 45112280 | 45112183 | ID=Msa1290380-mRNA-1:exon:12465;Parent=Msa1290380-mRNA-1 |
| chr8_3 | exon | 45112704 | 45113156 | 45112704 | ID=Msa1290380-mRNA-1:exon:12464;Parent=Msa1290380-mRNA-1 |
| chr8_3 | five_prime_UTR | 45112816 | 45113156 | 45112816 | ID=Msa1290380-mRNA-1:five_prime_utr;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45112704 | 45112815 | 45112704 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45112183 | 45112280 | 45112183 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45111909 | 45112085 | 45111909 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45111709 | 45111809 | 45111709 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45111420 | 45111495 | 45111420 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45111257 | 45111316 | 45111257 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45110967 | 45111151 | 45110967 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45110704 | 45110800 | 45110704 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45110295 | 45110381 | 45110295 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45110102 | 45110160 | 45110102 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45109839 | 45109930 | 45109839 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45109496 | 45109573 | 45109496 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45109239 | 45109399 | 45109239 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | CDS | 45108747 | 45108965 | 45108747 | ID=Msa1290380-mRNA-1:cds;Parent=Msa1290380-mRNA-1 |
| chr8_3 | three_prime_UTR | 45108598 | 45108746 | 45108598 | ID=Msa1290380-mRNA-1:three_prime_utr;Parent=Msa1290380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
