Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290440 | XP_003628664.2 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1078 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290440 | sp|Q27GI3|NAT6_ARATH | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290440 | G7LFG1 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1078 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa1290440 | 0.800981 | 1.116939e-48 | -8.615850e-47 |
| Msa0003080 | Msa1290440 | 0.813018 | 3.164942e-51 | -8.615850e-47 |
| Msa0013270 | Msa1290440 | 0.800384 | 1.478053e-48 | -8.615850e-47 |
| Msa0015150 | Msa1290440 | 0.815391 | 9.469690e-52 | -8.615850e-47 |
| Msa0025160 | Msa1290440 | 0.818926 | 1.519270e-52 | -8.615850e-47 |
| Msa0029990 | Msa1290440 | 0.809320 | 2.005771e-50 | -8.615850e-47 |
| Msa0033220 | Msa1290440 | 0.817542 | 3.124576e-52 | -8.615850e-47 |
| Msa0038150 | Msa1290440 | -0.805721 | 1.164016e-49 | -8.615850e-47 |
| Msa0044780 | Msa1290440 | -0.808832 | 2.551664e-50 | -8.615850e-47 |
| Msa0057840 | Msa1290440 | 0.807818 | 4.196986e-50 | -8.615850e-47 |
| Msa0062340 | Msa1290440 | 0.821212 | 4.551456e-53 | -8.615850e-47 |
| Msa0064120 | Msa1290440 | 0.813913 | 2.011618e-51 | -8.615850e-47 |
| Msa0071840 | Msa1290440 | 0.805553 | 1.262918e-49 | -8.615850e-47 |
| Msa0072520 | Msa1290440 | 0.839522 | 1.507217e-57 | -8.615850e-47 |
| Msa0077560 | Msa1290440 | 0.810594 | 1.066690e-50 | -8.615850e-47 |
| Msa0079880 | Msa1290440 | 0.811524 | 6.707171e-51 | -8.615850e-47 |
| Msa0080030 | Msa1290440 | 0.814355 | 1.606861e-51 | -8.615850e-47 |
| Msa0094570 | Msa1290440 | 0.817441 | 3.292487e-52 | -8.615850e-47 |
| Msa0094790 | Msa1290440 | 0.804989 | 1.657229e-49 | -8.615850e-47 |
| Msa0102240 | Msa1290440 | 0.844407 | 7.705763e-59 | -8.615850e-47 |
| Msa0106540 | Msa1290440 | 0.804643 | 1.957919e-49 | -8.615850e-47 |
| Msa0108630 | Msa1290440 | 0.801384 | 9.236752e-49 | -8.615850e-47 |
| Msa0108880 | Msa1290440 | 0.812984 | 3.219620e-51 | -8.615850e-47 |
| Msa0110200 | Msa1290440 | 0.807785 | 4.265833e-50 | -8.615850e-47 |
| Msa0607800 | Msa1290440 | 0.829323 | 5.489383e-55 | -8.615850e-47 |
| Msa0610700 | Msa1290440 | -0.803124 | 4.049812e-49 | -8.615850e-47 |
| Msa0619710 | Msa1290440 | 0.816628 | 5.013424e-52 | -8.615850e-47 |
| Msa0646430 | Msa1290440 | 0.802104 | 6.572214e-49 | -8.615850e-47 |
| Msa0647440 | Msa1290440 | 0.801418 | 9.089760e-49 | -8.615850e-47 |
| Msa0648040 | Msa1290440 | 0.828050 | 1.115004e-54 | -8.615850e-47 |
| Msa0657210 | Msa1290440 | 0.816816 | 4.550439e-52 | -8.615850e-47 |
| Msa0657710 | Msa1290440 | 0.822649 | 2.116368e-53 | -8.615850e-47 |
| Msa0660090 | Msa1290440 | 0.804791 | 1.823258e-49 | -8.615850e-47 |
| Msa0690740 | Msa1290440 | 0.822528 | 2.258001e-53 | -8.615850e-47 |
| Msa0701250 | Msa1290440 | 0.803834 | 2.884614e-49 | -8.615850e-47 |
| Msa0702800 | Msa1290440 | 0.818239 | 2.174364e-52 | -8.615850e-47 |
| Msa0706150 | Msa1290440 | 0.829304 | 5.549183e-55 | -8.615850e-47 |
| Msa0709440 | Msa1290440 | 0.821054 | 4.951762e-53 | -8.615850e-47 |
| Msa0716890 | Msa1290440 | 0.803040 | 4.214948e-49 | -8.615850e-47 |
| Msa0717900 | Msa1290440 | 0.804549 | 2.047846e-49 | -8.615850e-47 |
| Msa0719270 | Msa1290440 | 0.833863 | 4.177450e-56 | -8.615850e-47 |
| Msa0722890 | Msa1290440 | 0.826825 | 2.193318e-54 | -8.615850e-47 |
| Msa0723090 | Msa1290440 | 0.810182 | 1.308837e-50 | -8.615850e-47 |
| Msa0734250 | Msa1290440 | 0.828904 | 6.936116e-55 | -8.615850e-47 |
| Msa0740090 | Msa1290440 | 0.825798 | 3.850998e-54 | -8.615850e-47 |
| Msa0743440 | Msa1290440 | 0.808369 | 3.203506e-50 | -8.615850e-47 |
| Msa0745140 | Msa1290440 | 0.841075 | 5.919165e-58 | -8.615850e-47 |
| Msa0772220 | Msa1290440 | 0.811585 | 6.504876e-51 | -8.615850e-47 |
| Msa0775660 | Msa1290440 | 0.817396 | 3.370168e-52 | -8.615850e-47 |
| Msa0776640 | Msa1290440 | 0.844282 | 8.327283e-59 | -8.615850e-47 |
| Msa0778600 | Msa1290440 | 0.811819 | 5.784720e-51 | -8.615850e-47 |
| Msa0780910 | Msa1290440 | 0.828531 | 8.538335e-55 | -8.615850e-47 |
| Msa0782750 | Msa1290440 | 0.810496 | 1.119671e-50 | -8.615850e-47 |
| Msa0795750 | Msa1290440 | 0.803083 | 4.128463e-49 | -8.615850e-47 |
| Msa0811690 | Msa1290440 | 0.808585 | 2.881089e-50 | -8.615850e-47 |
| Msa0813160 | Msa1290440 | 0.813485 | 2.499793e-51 | -8.615850e-47 |
| Msa0815970 | Msa1290440 | 0.800616 | 1.325817e-48 | -8.615850e-47 |
| Msa0820380 | Msa1290440 | 0.816087 | 6.625129e-52 | -8.615850e-47 |
| Msa0821160 | Msa1290440 | 0.823606 | 1.265369e-53 | -8.615850e-47 |
| Msa0825920 | Msa1290440 | 0.842329 | 2.763585e-58 | -8.615850e-47 |
| Msa0828960 | Msa1290440 | 0.826541 | 2.563454e-54 | -8.615850e-47 |
| Msa0837460 | Msa1290440 | 0.803014 | 4.265884e-49 | -8.615850e-47 |
| Msa0838620 | Msa1290440 | -0.802835 | 4.646989e-49 | -8.615850e-47 |
| Msa0840520 | Msa1290440 | 0.833916 | 4.051132e-56 | -8.615850e-47 |
| Msa0125590 | Msa1290440 | 0.804726 | 1.880752e-49 | -8.615850e-47 |
| Msa0132700 | Msa1290440 | 0.818147 | 2.281106e-52 | -8.615850e-47 |
| Msa0139500 | Msa1290440 | 0.809888 | 1.514245e-50 | -8.615850e-47 |
| Msa0142430 | Msa1290440 | 0.803558 | 3.291727e-49 | -8.615850e-47 |
| Msa0146650 | Msa1290440 | 0.810257 | 1.261261e-50 | -8.615850e-47 |
| Msa0155180 | Msa1290440 | 0.812868 | 3.414646e-51 | -8.615850e-47 |
| Msa0165640 | Msa1290440 | 0.814241 | 1.703436e-51 | -8.615850e-47 |
| Msa0181880 | Msa1290440 | 0.800392 | 1.472769e-48 | -8.615850e-47 |
| Msa0190730 | Msa1290440 | 0.807668 | 4.517169e-50 | -8.615850e-47 |
| Msa0203080 | Msa1290440 | 0.836298 | 1.015690e-56 | -8.615850e-47 |
| Msa0204950 | Msa1290440 | 0.806103 | 9.679022e-50 | -8.615850e-47 |
| Msa0211460 | Msa1290440 | 0.806375 | 8.480324e-50 | -8.615850e-47 |
| Msa0221180 | Msa1290440 | 0.806322 | 8.701305e-50 | -8.615850e-47 |
| Msa1228580 | Msa1290440 | 0.834155 | 3.529910e-56 | -8.615850e-47 |
| Msa1254100 | Msa1290440 | 0.803758 | 2.992161e-49 | -8.615850e-47 |
| Msa1254540 | Msa1290440 | 0.818415 | 1.983497e-52 | -8.615850e-47 |
| Msa1257200 | Msa1290440 | 0.801079 | 1.066434e-48 | -8.615850e-47 |
| Msa1261160 | Msa1290440 | 0.814713 | 1.339386e-51 | -8.615850e-47 |
| Msa1263780 | Msa1290440 | 0.818024 | 2.432117e-52 | -8.615850e-47 |
| Msa1267930 | Msa1290440 | 0.804416 | 2.182785e-49 | -8.615850e-47 |
| Msa1290380 | Msa1290440 | 0.997403 | 6.412859e-242 | -8.615850e-47 |
| Msa1290440 | Msa1294280 | 0.830681 | 2.560877e-55 | -8.615850e-47 |
| Msa1290440 | Msa1294460 | 0.827668 | 1.377835e-54 | -8.615850e-47 |
| Msa1290440 | Msa1294790 | 0.809984 | 1.444225e-50 | -8.615850e-47 |
| Msa1290440 | Msa1295480 | -0.812118 | 4.980245e-51 | -8.615850e-47 |
| Msa1290440 | Msa1306820 | 0.808767 | 2.633819e-50 | -8.615850e-47 |
| Msa1290440 | Msa1308850 | 0.838695 | 2.468645e-57 | -8.615850e-47 |
| Msa1290440 | Msa1308860 | 0.812865 | 3.418760e-51 | -8.615850e-47 |
| Msa1290440 | Msa1327800 | 0.846938 | 1.585398e-59 | -8.615850e-47 |
| Msa1290440 | Msa1332950 | 0.817487 | 3.215003e-52 | -8.615850e-47 |
| Msa1290440 | Msa1348170 | -0.801194 | 1.009927e-48 | -8.615850e-47 |
| Msa1290440 | Msa1364680 | 0.840347 | 9.184877e-58 | -8.615850e-47 |
| Msa1290440 | Msa1365820 | 0.828975 | 6.666980e-55 | -8.615850e-47 |
| Msa1290440 | Msa1368390 | 0.844621 | 6.750760e-59 | -8.615850e-47 |
| Msa1290440 | Msa1368750 | 0.832650 | 8.372966e-56 | -8.615850e-47 |
| Msa1290440 | Msa1374790 | 0.831723 | 1.419752e-55 | -8.615850e-47 |
| Msa1290440 | Msa1381030 | 0.807433 | 5.066769e-50 | -8.615850e-47 |
| Msa1290440 | Msa1384150 | 0.827412 | 1.587023e-54 | -8.615850e-47 |
| Msa1290440 | Msa1387440 | 0.804057 | 2.592462e-49 | -8.615850e-47 |
| Msa1290440 | Msa1387500 | 0.801528 | 8.628242e-49 | -8.615850e-47 |
| Msa1290440 | Msa1391500 | 0.809535 | 1.803625e-50 | -8.615850e-47 |
| Msa1290440 | Msa1405830 | 0.804357 | 2.246209e-49 | -8.615850e-47 |
| Msa1290440 | Msa1406720 | 0.820634 | 6.184877e-53 | -8.615850e-47 |
| Msa1290440 | Msa1407810 | 0.822899 | 1.850677e-53 | -8.615850e-47 |
| Msa1290440 | Msa1407840 | 0.828707 | 7.738911e-55 | -8.615850e-47 |
| Msa1290440 | Msa1409410 | 0.826253 | 3.002608e-54 | -8.615850e-47 |
| Msa1290440 | Msa1410160 | 0.811644 | 6.315913e-51 | -8.615850e-47 |
| Msa1290440 | Msa1417370 | 0.823458 | 1.370571e-53 | -8.615850e-47 |
| Msa1290440 | Msa1429070 | 0.804515 | 2.081618e-49 | -8.615850e-47 |
| Msa1290440 | Msa1433360 | 0.822006 | 2.982941e-53 | -8.615850e-47 |
| Msa1290440 | Msa1435630 | 0.813819 | 2.109800e-51 | -8.615850e-47 |
| Msa1290440 | Msa1436620 | 0.833133 | 6.351439e-56 | -8.615850e-47 |
| Msa1290440 | Msa1437780 | 0.822287 | 2.567574e-53 | -8.615850e-47 |
| Msa1290440 | Msa1437810 | 0.830702 | 2.530626e-55 | -8.615850e-47 |
| Msa1290440 | Msa1440430 | 0.806763 | 7.025015e-50 | -8.615850e-47 |
| Msa1290440 | Msa1451820 | 0.833350 | 5.609268e-56 | -8.615850e-47 |
| Msa1290440 | Msa1454500 | 0.808831 | 2.552610e-50 | -8.615850e-47 |
| Msa1290440 | Msa1457770 | 0.808431 | 3.108498e-50 | -8.615850e-47 |
| Msa1290440 | Msa1457840 | 0.804113 | 2.524674e-49 | -8.615850e-47 |
| Msa0365210 | Msa1290440 | 0.818289 | 2.118930e-52 | -8.615850e-47 |
| Msa0380490 | Msa1290440 | 0.804772 | 1.839637e-49 | -8.615850e-47 |
| Msa0382530 | Msa1290440 | 0.813316 | 2.722563e-51 | -8.615850e-47 |
| Msa0383000 | Msa1290440 | 0.810322 | 1.220753e-50 | -8.615850e-47 |
| Msa0386540 | Msa1290440 | 0.808111 | 3.636764e-50 | -8.615850e-47 |
| Msa0386880 | Msa1290440 | 0.822318 | 2.526343e-53 | -8.615850e-47 |
| Msa0412790 | Msa1290440 | 0.806925 | 6.491446e-50 | -8.615850e-47 |
| Msa0421130 | Msa1290440 | 0.808837 | 2.545767e-50 | -8.615850e-47 |
| Msa0432010 | Msa1290440 | 0.832565 | 8.791499e-56 | -8.615850e-47 |
| Msa0437480 | Msa1290440 | 0.813473 | 2.514119e-51 | -8.615850e-47 |
| Msa0457570 | Msa1290440 | 0.821744 | 3.430254e-53 | -8.615850e-47 |
| Msa0466520 | Msa1290440 | 0.816414 | 5.598165e-52 | -8.615850e-47 |
| Msa0466880 | Msa1290440 | 0.814739 | 1.321504e-51 | -8.615850e-47 |
| Msa0467170 | Msa1290440 | 0.838187 | 3.337446e-57 | -8.615850e-47 |
| Msa0467330 | Msa1290440 | 0.843072 | 1.753777e-58 | -8.615850e-47 |
| Msa0468620 | Msa1290440 | 0.801835 | 7.465653e-49 | -8.615850e-47 |
| Msa0481670 | Msa1290440 | 0.824007 | 1.019092e-53 | -8.615850e-47 |
| Msa0481890 | Msa1290440 | 0.820342 | 7.216389e-53 | -8.615850e-47 |
| Msa1002640 | Msa1290440 | 0.806941 | 6.441736e-50 | -8.615850e-47 |
| Msa1014320 | Msa1290440 | 0.810011 | 1.424532e-50 | -8.615850e-47 |
| Msa1022420 | Msa1290440 | 0.805390 | 1.366444e-49 | -8.615850e-47 |
| Msa1031410 | Msa1290440 | 0.820160 | 7.943326e-53 | -8.615850e-47 |
| Msa1035610 | Msa1290440 | 0.800525 | 1.383306e-48 | -8.615850e-47 |
| Msa1042300 | Msa1290440 | 0.815209 | 1.039702e-51 | -8.615850e-47 |
| Msa1044250 | Msa1290440 | 0.852508 | 4.408710e-61 | -8.615850e-47 |
| Msa1052730 | Msa1290440 | 0.801805 | 7.572301e-49 | -8.615850e-47 |
| Msa1055310 | Msa1290440 | 0.807795 | 4.245352e-50 | -8.615850e-47 |
| Msa1068940 | Msa1290440 | 0.809758 | 1.615376e-50 | -8.615850e-47 |
| Msa1068960 | Msa1290440 | 0.824175 | 9.306957e-54 | -8.615850e-47 |
| Msa1082410 | Msa1290440 | 0.820077 | 8.299911e-53 | -8.615850e-47 |
| Msa1084530 | Msa1290440 | 0.821238 | 4.490162e-53 | -8.615850e-47 |
| Msa1104110 | Msa1290440 | 0.808530 | 2.959870e-50 | -8.615850e-47 |
| Msa1106590 | Msa1290440 | 0.836226 | 1.059375e-56 | -8.615850e-47 |
| Msa0262750 | Msa1290440 | 0.819409 | 1.179500e-52 | -8.615850e-47 |
| Msa0267510 | Msa1290440 | -0.800510 | 1.393460e-48 | -8.615850e-47 |
| Msa0269210 | Msa1290440 | 0.800257 | 1.569065e-48 | -8.615850e-47 |
| Msa0272260 | Msa1290440 | 0.812838 | 3.466149e-51 | -8.615850e-47 |
| Msa0284800 | Msa1290440 | 0.846399 | 2.225869e-59 | -8.615850e-47 |
| Msa0300470 | Msa1290440 | 0.808304 | 3.307250e-50 | -8.615850e-47 |
| Msa0313900 | Msa1290440 | 0.803571 | 3.272236e-49 | -8.615850e-47 |
| Msa0320600 | Msa1290440 | 0.807893 | 4.045214e-50 | -8.615850e-47 |
| Msa0326710 | Msa1290440 | 0.811306 | 7.478847e-51 | -8.615850e-47 |
| Msa0330520 | Msa1290440 | 0.832731 | 7.997153e-56 | -8.615850e-47 |
| Msa0337970 | Msa1290440 | 0.818871 | 1.563358e-52 | -8.615850e-47 |
| Msa0354840 | Msa1290440 | 0.830523 | 2.799995e-55 | -8.615850e-47 |
| Msa1125820 | Msa1290440 | 0.819580 | 1.077837e-52 | -8.615850e-47 |
| Msa1125990 | Msa1290440 | 0.820788 | 5.700098e-53 | -8.615850e-47 |
| Msa1147700 | Msa1290440 | 0.820801 | 5.660246e-53 | -8.615850e-47 |
| Msa1149910 | Msa1290440 | 0.828412 | 9.121466e-55 | -8.615850e-47 |
| Msa1154320 | Msa1290440 | 0.816038 | 6.793702e-52 | -8.615850e-47 |
| Msa1156710 | Msa1290440 | 0.801790 | 7.626630e-49 | -8.615850e-47 |
| Msa1156720 | Msa1290440 | 0.812342 | 4.449718e-51 | -8.615850e-47 |
| Msa1156730 | Msa1290440 | 0.808513 | 2.984428e-50 | -8.615850e-47 |
| Msa1165460 | Msa1290440 | 0.800143 | 1.654899e-48 | -8.615850e-47 |
| Msa1171290 | Msa1290440 | 0.814414 | 1.559752e-51 | -8.615850e-47 |
| Msa1183910 | Msa1290440 | 0.807633 | 4.595904e-50 | -8.615850e-47 |
| Msa1192360 | Msa1290440 | 0.800917 | 1.150593e-48 | -8.615850e-47 |
| Msa1192560 | Msa1290440 | 0.814118 | 1.813116e-51 | -8.615850e-47 |
| Msa1192590 | Msa1290440 | 0.806533 | 7.856393e-50 | -8.615850e-47 |
| Msa1194240 | Msa1290440 | 0.859094 | 5.244291e-63 | -8.615850e-47 |
| Msa1201170 | Msa1290440 | 0.808989 | 2.361662e-50 | -8.615850e-47 |
| Msa1201780 | Msa1290440 | 0.813826 | 2.102321e-51 | -8.615850e-47 |
| Msa1206920 | Msa1290440 | 0.800676 | 1.288738e-48 | -8.615850e-47 |
| Msa1211640 | Msa1290440 | 0.817651 | 2.952328e-52 | -8.615850e-47 |
| Msa0513640 | Msa1290440 | 0.801975 | 6.985510e-49 | -8.615850e-47 |
| Msa0514020 | Msa1290440 | 0.802690 | 4.976631e-49 | -8.615850e-47 |
| Msa0514500 | Msa1290440 | 0.801143 | 1.034722e-48 | -8.615850e-47 |
| Msa0520870 | Msa1290440 | 0.807901 | 4.030495e-50 | -8.615850e-47 |
| Msa0525210 | Msa1290440 | 0.810070 | 1.383679e-50 | -8.615850e-47 |
| Msa0531960 | Msa1290440 | 0.801371 | 9.292702e-49 | -8.615850e-47 |
| Msa0541740 | Msa1290440 | 0.806709 | 7.212260e-50 | -8.615850e-47 |
| Msa0566280 | Msa1290440 | 0.804521 | 2.075648e-49 | -8.615850e-47 |
| Msa0567330 | Msa1290440 | 0.819691 | 1.016704e-52 | -8.615850e-47 |
| Msa0567570 | Msa1290440 | 0.818153 | 2.273621e-52 | -8.615850e-47 |
| Msa0574900 | Msa1290440 | 0.811642 | 6.322102e-51 | -8.615850e-47 |
| Msa0576320 | Msa1290440 | 0.811244 | 7.712717e-51 | -8.615850e-47 |
| Msa0586200 | Msa1290440 | 0.810706 | 1.008911e-50 | -8.615850e-47 |
| Msa0851850 | Msa1290440 | 0.800028 | 1.746066e-48 | -8.615850e-47 |
| Msa0853590 | Msa1290440 | 0.843541 | 1.315510e-58 | -8.615850e-47 |
| Msa0865420 | Msa1290440 | 0.851530 | 8.358780e-61 | -8.615850e-47 |
| Msa0865450 | Msa1290440 | 0.813046 | 3.121065e-51 | -8.615850e-47 |
| Msa0866530 | Msa1290440 | 0.804609 | 1.989524e-49 | -8.615850e-47 |
| Msa0930770 | Msa1290440 | 0.808292 | 3.327803e-50 | -8.615850e-47 |
| Msa0945030 | Msa1290440 | 0.848653 | 5.343707e-60 | -8.615850e-47 |
| Msa0956350 | Msa1290440 | 0.802395 | 5.725860e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290440 | MtrunA17_Chr8g0364611 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1078 |
| Msa1290440 | MtrunA17_Chr5g0414131 | 82.609 | 529 | 91 | 1 | 6 | 533 | 10 | 538 | 0.0 | 901 |
| Msa1290440 | MtrunA17_Chr4g0059331 | 81.801 | 533 | 96 | 1 | 1 | 533 | 1 | 532 | 0.0 | 899 |
| Msa1290440 | MtrunA17_Chr3g0117941 | 80.863 | 533 | 101 | 1 | 1 | 533 | 1 | 532 | 0.0 | 889 |
| Msa1290440 | MtrunA17_Chr3g0134911 | 57.066 | 559 | 194 | 4 | 13 | 533 | 35 | 585 | 0.0 | 655 |
| Msa1290440 | MtrunA17_Chr2g0284061 | 59.962 | 522 | 206 | 2 | 10 | 531 | 4 | 522 | 0.0 | 649 |
| Msa1290440 | MtrunA17_Chr8g0379171 | 59.846 | 518 | 206 | 1 | 14 | 531 | 7 | 522 | 0.0 | 645 |
| Msa1290440 | MtrunA17_Chr1g0207021 | 59.962 | 527 | 208 | 2 | 6 | 532 | 3 | 526 | 0.0 | 644 |
| Msa1290440 | MtrunA17_Chr5g0405471 | 57.407 | 540 | 210 | 3 | 11 | 533 | 26 | 562 | 0.0 | 639 |
| Msa1290440 | MtrunA17_Chr3g0119521 | 58.252 | 515 | 212 | 2 | 18 | 531 | 6 | 518 | 0.0 | 612 |
| Msa1290440 | MtrunA17_Chr1g0154001 | 51.852 | 513 | 241 | 3 | 22 | 532 | 38 | 546 | 0.0 | 520 |
| Msa1290440 | MtrunA17_Chr8g0367361 | 34.823 | 537 | 312 | 5 | 26 | 530 | 238 | 768 | 2.34e-106 | 335 |
| Msa1290440 | MtrunA17_Chr5g0412181 | 36.873 | 518 | 289 | 5 | 41 | 526 | 182 | 693 | 6.03e-103 | 325 |
| Msa1290440 | MtrunA17_Chr4g0027121 | 34.549 | 521 | 302 | 5 | 44 | 530 | 171 | 686 | 6.39e-97 | 308 |
| Msa1290440 | MtrunA17_Chr2g0320981 | 34.933 | 521 | 299 | 5 | 44 | 530 | 164 | 678 | 8.39e-96 | 305 |
| Msa1290440 | MtrunA17_Chr2g0332871 | 31.881 | 505 | 296 | 6 | 47 | 530 | 166 | 643 | 3.16e-86 | 279 |
| Msa1290440 | MtrunA17_Chr8g0379181 | 50.000 | 56 | 28 | 0 | 406 | 461 | 7 | 62 | 5.18e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290440 | AT5G62890.1 | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Msa1290440 | AT5G62890.2 | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Msa1290440 | AT5G62890.3 | 82.364 | 533 | 93 | 1 | 1 | 533 | 1 | 532 | 0.0 | 912 |
| Msa1290440 | AT1G60030.1 | 80.645 | 527 | 102 | 0 | 7 | 533 | 12 | 538 | 0.0 | 897 |
| Msa1290440 | AT5G49990.2 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290440 | AT5G49990.3 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290440 | AT5G49990.1 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290440 | AT5G49990.4 | 77.462 | 528 | 118 | 1 | 6 | 533 | 2 | 528 | 0.0 | 833 |
| Msa1290440 | AT1G10540.1 | 73.792 | 538 | 135 | 3 | 1 | 532 | 1 | 538 | 0.0 | 831 |
| Msa1290440 | AT5G62890.4 | 82.646 | 461 | 79 | 1 | 1 | 461 | 1 | 460 | 0.0 | 785 |
| Msa1290440 | AT1G49960.1 | 61.111 | 522 | 203 | 0 | 11 | 532 | 4 | 525 | 0.0 | 656 |
| Msa1290440 | AT2G34190.1 | 59.459 | 518 | 208 | 1 | 14 | 531 | 7 | 522 | 0.0 | 643 |
| Msa1290440 | AT1G65550.1 | 56.144 | 529 | 223 | 2 | 11 | 532 | 14 | 540 | 0.0 | 628 |
| Msa1290440 | AT2G05760.1 | 56.286 | 517 | 223 | 2 | 16 | 531 | 4 | 518 | 0.0 | 605 |
| Msa1290440 | AT1G10540.2 | 74.227 | 388 | 94 | 3 | 1 | 382 | 1 | 388 | 0.0 | 593 |
| Msa1290440 | AT2G26510.1 | 48.833 | 514 | 262 | 1 | 19 | 532 | 36 | 548 | 2.10e-175 | 506 |
| Msa1290440 | AT5G25420.1 | 50.229 | 436 | 149 | 4 | 11 | 446 | 26 | 393 | 1.64e-144 | 422 |
| Msa1290440 | AT2G26510.3 | 50.549 | 364 | 180 | 0 | 19 | 382 | 36 | 399 | 6.42e-123 | 367 |
| Msa1290440 | AT2G26510.2 | 49.858 | 351 | 176 | 0 | 19 | 369 | 36 | 386 | 1.54e-116 | 351 |
| Msa1290440 | AT2G27810.1 | 34.595 | 555 | 320 | 6 | 14 | 530 | 152 | 701 | 8.84e-99 | 314 |
| Msa1290440 | AT2G27810.4 | 33.161 | 579 | 320 | 7 | 14 | 530 | 152 | 725 | 8.41e-94 | 301 |
| Msa1290440 | AT4G38050.1 | 35.057 | 522 | 301 | 4 | 41 | 530 | 189 | 704 | 2.61e-91 | 295 |
| Msa1290440 | AT2G27810.2 | 37.813 | 439 | 250 | 4 | 14 | 430 | 152 | 589 | 1.21e-84 | 274 |
| Msa1290440 | AT2G27810.3 | 37.755 | 392 | 221 | 4 | 14 | 383 | 152 | 542 | 7.15e-74 | 244 |
Find 136 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTTGGACTGTATGAATT+TGG | 0.149654 | 8_3:-45159189 | Msa1290440:CDS |
| AACAACTATTTCGATTATTT+TGG | 0.157131 | 8_3:-45159703 | Msa1290440:CDS |
| AATATATATGTAGGAAAATT+TGG | 0.187280 | 8_3:-45157323 | Msa1290440:intron |
| AGCATTTGTTGCCAGTTTAT+TGG | 0.207869 | 8_3:-45156667 | Msa1290440:CDS |
| CAAACAAGAAGTCAAGTTTA+AGG | 0.212599 | 8_3:+45160848 | None:intergenic |
| TCAACACTTCAAATTGTTCT+TGG | 0.257245 | 8_3:-45159498 | Msa1290440:CDS |
| CTTGCAAAATGCGTGGAAAT+TGG | 0.267827 | 8_3:-45159053 | Msa1290440:CDS |
| ATAATGTTATCTGGAATCTT+TGG | 0.270420 | 8_3:-45157888 | Msa1290440:CDS |
| TTGGTTGCTCTCTCAGGCTT+TGG | 0.275859 | 8_3:-45159204 | Msa1290440:CDS |
| ACAGATCGTGCCGGAATTAT+AGG | 0.284987 | 8_3:-45158738 | Msa1290440:CDS |
| ACTACTAGGATGATGATTTC+TGG | 0.292845 | 8_3:+45159026 | None:intergenic |
| ATGAATAATTTCTTCACTCT+TGG | 0.313211 | 8_3:+45160819 | None:intergenic |
| GTTCCATTGGTTGCTCTCTC+AGG | 0.316235 | 8_3:-45159210 | Msa1290440:CDS |
| GAAGTGTTGAAGCAACTATA+AGG | 0.319361 | 8_3:+45159511 | None:intergenic |
| ACTCGTCTACCTGCGGTTAT+TGG | 0.330066 | 8_3:-45159747 | Msa1290440:CDS |
| TTTAGAACAAAATTCATCTT+AGG | 0.336915 | 8_3:-45157092 | Msa1290440:CDS |
| TATAGAGAATCCCATGAAAA+TGG | 0.352086 | 8_3:+45157064 | None:intergenic |
| GACGAGTTCCAAATGTTGTT+TGG | 0.353107 | 8_3:+45159763 | None:intergenic |
| TATGCTTATCTTCTTACTGT+TGG | 0.361248 | 8_3:-45158807 | Msa1290440:CDS |
| CAAATTGTTCTTGGCTTTAG+TGG | 0.362555 | 8_3:-45159489 | Msa1290440:CDS |
| TAATGTTATCTGGAATCTTT+GGG | 0.364132 | 8_3:-45157887 | Msa1290440:CDS |
| TGAATAATTTCTTCACTCTT+GGG | 0.372004 | 8_3:+45160820 | None:intergenic |
| AAACAAGAAGTCAAGTTTAA+GGG | 0.378748 | 8_3:+45160849 | None:intergenic |
| TCCTCTCTCTGCTGTTCCAT+TGG | 0.380614 | 8_3:-45159223 | Msa1290440:CDS |
| GCTTATCTTCTTACTGTTGG+TGG | 0.382600 | 8_3:-45158804 | Msa1290440:CDS |
| TCGATTTGCAGTTATATTCT+CGG | 0.386839 | 8_3:-45158847 | Msa1290440:CDS |
| CAATATAAAGCTGCAACTAT+TGG | 0.396056 | 8_3:+45157275 | None:intergenic |
| CTAAGAACTGAAGGTGGAAT+TGG | 0.398423 | 8_3:+45158073 | None:intergenic |
| TTTGGTAATTGATCTTTAAC+CGG | 0.400618 | 8_3:+45160498 | None:intergenic |
| GGAATCTTTGGGACGGGGAA+TGG | 0.403946 | 8_3:-45157876 | Msa1290440:CDS |
| GGAGTGGGAATAATGTTATC+TGG | 0.409107 | 8_3:-45157897 | Msa1290440:CDS |
| GTTCTCAGAAGTTTGAGTTT+TGG | 0.413475 | 8_3:-45160603 | Msa1290440:five_prime_UTR |
| ACAAATGCTTCTGATGCAAA+TGG | 0.417511 | 8_3:+45156681 | None:intergenic |
| AAAATAATCGAAATAGTTGT+TGG | 0.427661 | 8_3:+45159705 | None:intergenic |
| AGGAGCACCACCTATAATTC+CGG | 0.429912 | 8_3:+45158728 | None:intergenic |
| TTTCTTGTTCCACAGTCAAC+AGG | 0.435265 | 8_3:-45158133 | Msa1290440:intron |
| AAGTGTTGAAGCAACTATAA+GGG | 0.436382 | 8_3:+45159512 | None:intergenic |
| GTAATACAATAAGAAACATT+TGG | 0.436718 | 8_3:+45160480 | None:intergenic |
| GGAAGAAGTTCATCTAGCTT+TGG | 0.438949 | 8_3:+45160525 | None:intergenic |
| CAACATTACCTTGTGATGCT+TGG | 0.442847 | 8_3:-45159994 | Msa1290440:CDS |
| GATTCAGACTCTACTATTTG+TGG | 0.446047 | 8_3:-45159805 | Msa1290440:CDS |
| TTCTTGGCTTTAGTGGACTT+TGG | 0.452149 | 8_3:-45159482 | Msa1290440:CDS |
| GAAGCTGAGGCAATCCTACT+TGG | 0.453748 | 8_3:-45160021 | Msa1290440:intron |
| TGAGGTTGAGAAATTGATGT+AGG | 0.457463 | 8_3:-45160668 | Msa1290440:five_prime_UTR |
| AATTGATCTTTAACCGGATG+TGG | 0.458173 | 8_3:+45160504 | None:intergenic |
| ATCTAGTTTCGTGTCTCTGT+CGG | 0.462097 | 8_3:-45160711 | Msa1290440:five_prime_UTR |
| CCGCAGGGTTGTTCAAATAT+CGG | 0.465428 | 8_3:-45157628 | Msa1290440:CDS |
| TGTTTAAATTGCAAAATTGA+AGG | 0.465704 | 8_3:+45157117 | None:intergenic |
| TTATCTGGAATCTTTGGGAC+GGG | 0.466849 | 8_3:-45157882 | Msa1290440:CDS |
| ACTGCAAATCGATCAAAGAT+AGG | 0.467601 | 8_3:+45158858 | None:intergenic |
| GAGTCCCGTATCCCTTTCAA+TGG | 0.474945 | 8_3:-45158532 | Msa1290440:CDS |
| AAAGCTGCAACTATTGGTGC+TGG | 0.480315 | 8_3:+45157281 | None:intergenic |
| ATCTGAGGGACTAGAGAGCT+TGG | 0.483173 | 8_3:+45159955 | None:intergenic |
| GAATTATAGGTGGTGCTCCT+TGG | 0.486079 | 8_3:-45158725 | Msa1290440:intron |
| CATCTTGCGCGTGTGTGTAC+AGG | 0.486445 | 8_3:+45156999 | None:intergenic |
| AATCAAACACGTAAAGATAG+AGG | 0.492332 | 8_3:-45156609 | Msa1290440:CDS |
| GTGTAATTAGACCATGCTCT+TGG | 0.493072 | 8_3:-45156489 | Msa1290440:exon |
| AGATGAACTTCTTCCACATC+CGG | 0.493420 | 8_3:-45160517 | Msa1290440:CDS |
| CGTCTACCTGCGGTTATTGG+AGG | 0.495761 | 8_3:-45159744 | Msa1290440:CDS |
| AGAAATTTGAGAAGATAATG+AGG | 0.496651 | 8_3:-45159548 | Msa1290440:CDS |
| TAGCAGAGGTGTAGGTTGGC+AGG | 0.497651 | 8_3:-45158053 | Msa1290440:intron |
| TGACGCGTGTAGGTAGCCGC+AGG | 0.498429 | 8_3:-45157644 | Msa1290440:CDS |
| AGTCCCGTATCCCTTTCAAT+GGG | 0.498864 | 8_3:-45158531 | Msa1290440:CDS |
| TTCTTAGCAGAGGTGTAGGT+TGG | 0.500569 | 8_3:-45158057 | Msa1290440:CDS |
| TACACAGCATTTAAAAGCTA+TGG | 0.503124 | 8_3:-45157023 | Msa1290440:CDS |
| GTTTCACCAGCATCAAATGT+TGG | 0.514762 | 8_3:+45158503 | None:intergenic |
| CAAATGCTTCTGATGCAAAT+GGG | 0.516521 | 8_3:+45156682 | None:intergenic |
| CTGTACACACACGCGCAAGA+TGG | 0.516786 | 8_3:-45156998 | Msa1290440:CDS |
| GAGGTTGAGAAATTGATGTA+GGG | 0.518548 | 8_3:-45160667 | Msa1290440:five_prime_UTR |
| GCTCCCCATTGAAAGGGATA+CGG | 0.521423 | 8_3:+45158527 | None:intergenic |
| GAAATTTGAGAAGATAATGA+GGG | 0.527302 | 8_3:-45159547 | Msa1290440:CDS |
| TCAGTTCTTAGCAGAGGTGT+AGG | 0.527841 | 8_3:-45158061 | Msa1290440:CDS |
| AGTTCATCTAGCTTTGGTTG+TGG | 0.528453 | 8_3:+45160531 | None:intergenic |
| CTCCCCATTGAAAGGGATAC+GGG | 0.528947 | 8_3:+45158528 | None:intergenic |
| TACCCACATAGGCAAAGAAA+AGG | 0.529465 | 8_3:+45157252 | None:intergenic |
| CATTTCCTCCTCCCATCTGA+GGG | 0.532316 | 8_3:+45159941 | None:intergenic |
| TGTTGGAGCTCCCCATTGAA+AGG | 0.534302 | 8_3:+45158520 | None:intergenic |
| AGGGTTGTTCAAATATCGGC+TGG | 0.534987 | 8_3:-45157624 | Msa1290440:CDS |
| TGACATAACATAGGTTCTGC+AGG | 0.544476 | 8_3:-45157149 | Msa1290440:intron |
| AAGATAGAGGAATGCATTGG+TGG | 0.544867 | 8_3:-45156596 | Msa1290440:CDS |
| TTACCTGTGAAAATACTACT+AGG | 0.545707 | 8_3:+45159012 | None:intergenic |
| CAGACTCTACTATTTGTGGC+TGG | 0.549069 | 8_3:-45159801 | Msa1290440:CDS |
| TGTACACACACGCGCAAGAT+GGG | 0.549270 | 8_3:-45156997 | Msa1290440:intron |
| ACATTTCCTCCTCCCATCTG+AGG | 0.556933 | 8_3:+45159940 | None:intergenic |
| TTTCGTATGTATCAGGGAGT+GGG | 0.558832 | 8_3:-45157912 | Msa1290440:intron |
| GCATGGTCTAATTACACAGA+AGG | 0.559108 | 8_3:+45156495 | None:intergenic |
| GTTGGAGCTCCCCATTGAAA+GGG | 0.562774 | 8_3:+45158521 | None:intergenic |
| TATTCTCGGTGGCAATTGTG+TGG | 0.565953 | 8_3:-45158833 | Msa1290440:CDS |
| GTGCTTTCATTGCTGTGTCA+AGG | 0.567975 | 8_3:-45158111 | Msa1290440:CDS |
| TTGTATCTGTCTTGAATGAA+CGG | 0.569196 | 8_3:+45156565 | None:intergenic |
| AGCTCTCTAGTCCCTCAGAT+GGG | 0.572831 | 8_3:-45159952 | Msa1290440:CDS |
| CCACCTTCAGTTCTTAGCAG+AGG | 0.574616 | 8_3:-45158067 | Msa1290440:CDS |
| TACATTCCTCACATGATGAA+AGG | 0.578852 | 8_3:-45158888 | Msa1290440:CDS |
| CTAGTCCCTCAGATGGGAGG+AGG | 0.579586 | 8_3:-45159946 | Msa1290440:CDS |
| GAAGATAATGAGGGGAACAC+AGG | 0.579779 | 8_3:-45159538 | Msa1290440:CDS |
| GGTAATGTTGAAAACCAAGT+AGG | 0.581981 | 8_3:+45160007 | None:intergenic |
| TTCATTAGTTGCTCTAGTAG+AGG | 0.583871 | 8_3:-45158462 | Msa1290440:intron |
| AGTTGTTGGCACAAAAGTGT+AGG | 0.584640 | 8_3:+45159719 | None:intergenic |
| TTGATAATACATACCCACAT+AGG | 0.586210 | 8_3:+45157241 | None:intergenic |
| TGCGACAAACCAACCTCATG+AGG | 0.586478 | 8_3:+45159654 | None:intergenic |
| AGTAACTTACGCCATGGAGG+AGG | 0.587102 | 8_3:+45160453 | None:intergenic |
| AAGCTCTCTAGTCCCTCAGA+TGG | 0.588907 | 8_3:-45159953 | Msa1290440:CDS |
| GTATTACAAGTCCTCCTCCA+TGG | 0.592330 | 8_3:-45160464 | Msa1290440:CDS |
| GTGTATTCATTGAAATATTG+TGG | 0.597545 | 8_3:+45157041 | None:intergenic |
| ACACCTCTGCTAAGAACTGA+AGG | 0.598541 | 8_3:+45158064 | None:intergenic |
| AAGATAATGAGGGGAACACA+GGG | 0.601084 | 8_3:-45159537 | Msa1290440:CDS |
| GTTATCTGGAATCTTTGGGA+CGG | 0.603451 | 8_3:-45157883 | Msa1290440:CDS |
| CTCTTAGCTTTGACGCGTGT+AGG | 0.604171 | 8_3:-45157654 | Msa1290440:CDS |
| CCATGCAAGTTCCAAGAGCA+TGG | 0.606578 | 8_3:+45156478 | None:intergenic |
| GACTTTGGCGCAATGTAGTG+AGG | 0.608806 | 8_3:-45159467 | Msa1290440:intron |
| ATTATAGCTTGCAAAATGCG+TGG | 0.611240 | 8_3:-45159060 | Msa1290440:intron |
| CTAAAACACAAATTACATGT+AGG | 0.613818 | 8_3:-45158761 | Msa1290440:CDS |
| GTATGAATTTGGATTTCCTG+TGG | 0.614553 | 8_3:-45159178 | Msa1290440:intron |
| AAGCCTGAGAGAGCAACCAA+TGG | 0.615790 | 8_3:+45159207 | None:intergenic |
| TAGGATCCTCCAATAACCGC+AGG | 0.620528 | 8_3:+45159738 | None:intergenic |
| CCATGCTCTTGGAACTTGCA+TGG | 0.620546 | 8_3:-45156478 | Msa1290440:three_prime_UTR |
| CATGGTCTAATTACACAGAA+GGG | 0.621529 | 8_3:+45156496 | None:intergenic |
| AGATAGAGGAATGCATTGGT+GGG | 0.621819 | 8_3:-45156595 | Msa1290440:CDS |
| GACGCGTGTAGGTAGCCGCA+GGG | 0.622153 | 8_3:-45157643 | Msa1290440:CDS |
| GGAGCTCCAACATTTGATGC+TGG | 0.622188 | 8_3:-45158509 | Msa1290440:CDS |
| GTTCATTCAAGACAGATACA+AGG | 0.624734 | 8_3:-45156563 | Msa1290440:CDS |
| TATCTGGAATCTTTGGGACG+GGG | 0.626815 | 8_3:-45157881 | Msa1290440:CDS |
| ACCAATGGAACAGCAGAGAG+AGG | 0.631694 | 8_3:+45159222 | None:intergenic |
| GTAAAGATAGAGGAATGCAT+TGG | 0.632524 | 8_3:-45156599 | Msa1290440:CDS |
| ACATGTAGGACAGATCGTGC+CGG | 0.640862 | 8_3:-45158747 | Msa1290440:CDS |
| TCTCTAGTCCCTCAGATGGG+AGG | 0.650215 | 8_3:-45159949 | Msa1290440:CDS |
| CAGTTGTACCAAGCATCACA+AGG | 0.652446 | 8_3:+45159986 | None:intergenic |
| ATTTGCAGTTATATTCTCGG+TGG | 0.660016 | 8_3:-45158844 | Msa1290440:CDS |
| ATTTGGAACTCGTCTACCTG+CGG | 0.665975 | 8_3:-45159754 | Msa1290440:CDS |
| CCTCTGCTAAGAACTGAAGG+TGG | 0.671195 | 8_3:+45158067 | None:intergenic |
| GATCGTGCCGGAATTATAGG+TGG | 0.686788 | 8_3:-45158735 | Msa1290440:CDS |
| AAATTTGAGAAGATAATGAG+GGG | 0.699765 | 8_3:-45159546 | Msa1290440:CDS |
| TGACATTGTGAATCCTCATG+AGG | 0.715159 | 8_3:-45159667 | Msa1290440:intron |
| TTAAGTAACTTACGCCATGG+AGG | 0.719479 | 8_3:+45160450 | None:intergenic |
| GTCCCGTATCCCTTTCAATG+GGG | 0.733559 | 8_3:-45158530 | Msa1290440:CDS |
| CCGATATTTGAACAACCCTG+CGG | 0.758567 | 8_3:+45157628 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATTATTTAAATTTCA+AGG | + | chr8_3:45157905-45157924 | None:intergenic | 10.0% |
| !! | GTTATAATTATAAAACATAT+GGG | + | chr8_3:45158136-45158155 | None:intergenic | 10.0% |
| !! | TATTATCAATTTAAATAAGT+TGG | - | chr8_3:45160023-45160042 | Msa1290440:intron | 10.0% |
| !! | TTATATTGCATAAAAATTAA+AGG | + | chr8_3:45160292-45160311 | None:intergenic | 10.0% |
| !! | TAAGTTCATAATAAGAAAAA+TGG | - | chr8_3:45156679-45156698 | Msa1290440:CDS | 15.0% |
| !! | TGGTTATTAATATTATTGTT+TGG | - | chr8_3:45157367-45157386 | Msa1290440:intron | 15.0% |
| !! | AATTTCAAAAAAATGTATGT+TGG | - | chr8_3:45157917-45157936 | Msa1290440:intron | 15.0% |
| !! | CGTTATAATTATAAAACATA+TGG | + | chr8_3:45158137-45158156 | None:intergenic | 15.0% |
| !! | TACTATATATAGATGAAATA+TGG | + | chr8_3:45158293-45158312 | None:intergenic | 15.0% |
| !!! | AGGTATATTTATTGTTATTT+TGG | - | chr8_3:45158808-45158827 | Msa1290440:CDS | 15.0% |
| !! | AATTCTATGTAACATAATAT+TGG | - | chr8_3:45159549-45159568 | Msa1290440:CDS | 15.0% |
| !! | ACCACTAAAAAAAATAAAAA+TGG | - | chr8_3:45159750-45159769 | Msa1290440:CDS | 15.0% |
| !!! | TCCATTTTTATTTTTTTTAG+TGG | + | chr8_3:45159754-45159773 | None:intergenic | 15.0% |
| !! | AATATATATGTAGGAAAATT+TGG | - | chr8_3:45159927-45159946 | Msa1290440:intron | 15.0% |
| !! | TAATATTGATATTTCATTCA+AGG | - | chr8_3:45160051-45160070 | Msa1290440:intron | 15.0% |
| !!! | TTTTTGTTTTTCTTCTCTAA+GGG | - | chr8_3:45156456-45156475 | Msa1290440:three_prime_UTR | 20.0% |
| !! | GTAATACAATAAGAAACATT+TGG | + | chr8_3:45156773-45156792 | None:intergenic | 20.0% |
| !!! | AAGTTACTTAACTTTTTCAT+TGG | - | chr8_3:45156812-45156831 | Msa1290440:intron | 20.0% |
| !!! | AACCATTTTGAGTATATTTT+TGG | - | chr8_3:45156835-45156854 | Msa1290440:intron | 20.0% |
| !!! | TTACTTCCATTTTTTCAAAT+CGG | + | chr8_3:45156997-45157016 | None:intergenic | 20.0% |
| !! | AAAATAATCGAAATAGTTGT+TGG | + | chr8_3:45157548-45157567 | None:intergenic | 20.0% |
| !!! | AACAACTATTTCGATTATTT+TGG | - | chr8_3:45157547-45157566 | Msa1290440:intron | 20.0% |
| !! | TTCATGAATATGATAATATG+AGG | + | chr8_3:45157975-45157994 | None:intergenic | 20.0% |
| !!! | AATTCTATGTATTTTTGTTC+AGG | - | chr8_3:45157996-45158015 | Msa1290440:intron | 20.0% |
| !!! | ATCTGTTTTATATTTAGAGT+CGG | + | chr8_3:45158942-45158961 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTCTAATAGAGT+AGG | - | chr8_3:45159526-45159545 | Msa1290440:CDS | 20.0% |
| !! | ATGGATCATAATATATATGT+AGG | - | chr8_3:45159918-45159937 | Msa1290440:intron | 20.0% |
| !!! | TTTTTATGTTGACATAACAT+AGG | - | chr8_3:45160092-45160111 | Msa1290440:intron | 20.0% |
| !! | TGTTTAAATTGCAAAATTGA+AGG | + | chr8_3:45160136-45160155 | None:intergenic | 20.0% |
| !!! | TTTAGAACAAAATTCATCTT+AGG | - | chr8_3:45160158-45160177 | Msa1290440:intron | 20.0% |
| !!! | AAAAACTTGTTTAGATTGAA+AGG | + | chr8_3:45160734-45160753 | None:intergenic | 20.0% |
| ! | AAACAAGAAGTCAAGTTTAA+GGG | + | chr8_3:45156404-45156423 | None:intergenic | 25.0% |
| ! | TGAATAATTTCTTCACTCTT+GGG | + | chr8_3:45156433-45156452 | None:intergenic | 25.0% |
| ! | ATGAATAATTTCTTCACTCT+TGG | + | chr8_3:45156434-45156453 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTTTTCTTCTCTA+AGG | - | chr8_3:45156455-45156474 | Msa1290440:three_prime_UTR | 25.0% |
| !!! | TTGCATAGTAACTATTTTTG+AGG | - | chr8_3:45156564-45156583 | Msa1290440:CDS | 25.0% |
| ! | TTCATAATAAGAAAAATGGC+AGG | - | chr8_3:45156683-45156702 | Msa1290440:CDS | 25.0% |
| !! | TTTGGTAATTGATCTTTAAC+CGG | + | chr8_3:45156755-45156774 | None:intergenic | 25.0% |
| ! | AGCCAAAAATATACTCAAAA+TGG | + | chr8_3:45156840-45156859 | None:intergenic | 25.0% |
| !!! | ATTTTTTCAAATCGGTGTTT+AGG | + | chr8_3:45156989-45157008 | None:intergenic | 25.0% |
| !!! | TAAACACCGATTTGAAAAAA+TGG | - | chr8_3:45156988-45157007 | Msa1290440:intron | 25.0% |
| ! | AGAATAGTTTAGCAAATTGA+AGG | - | chr8_3:45157127-45157146 | Msa1290440:CDS | 25.0% |
| ! | AGTCTTAGAATCAATCTAAA+AGG | - | chr8_3:45157334-45157353 | Msa1290440:intron | 25.0% |
| ! | TTGGTTCATAAATCTAATGA+AGG | - | chr8_3:45157386-45157405 | Msa1290440:intron | 25.0% |
| !! | ACATTTTTCCAAACAACATT+TGG | - | chr8_3:45157479-45157498 | Msa1290440:intron | 25.0% |
| ! | AGAAATTTGAGAAGATAATG+AGG | - | chr8_3:45157702-45157721 | Msa1290440:intron | 25.0% |
| ! | GAAATTTGAGAAGATAATGA+GGG | - | chr8_3:45157703-45157722 | Msa1290440:intron | 25.0% |
| ! | AAATTTGAGAAGATAATGAG+GGG | - | chr8_3:45157704-45157723 | Msa1290440:intron | 25.0% |
| ! | AAACATATGGGAAGAAAATA+AGG | + | chr8_3:45158124-45158143 | None:intergenic | 25.0% |
| !!! | CTACATGTAATTTGTGTTTT+AGG | + | chr8_3:45158491-45158510 | None:intergenic | 25.0% |
| ! | CTAAAACACAAATTACATGT+AGG | - | chr8_3:45158489-45158508 | Msa1290440:CDS | 25.0% |
| !!! | TTATTTTGTAAGCATCTGTT+TGG | + | chr8_3:45158684-45158703 | None:intergenic | 25.0% |
| !! | GCTTACAAAATAAATTTTGC+AGG | - | chr8_3:45158691-45158710 | Msa1290440:intron | 25.0% |
| !!! | TCTGTTTTATATTTAGAGTC+GGG | + | chr8_3:45158941-45158960 | None:intergenic | 25.0% |
| ! | AAGTGAAAACAAAAAATGCA+TGG | + | chr8_3:45159253-45159272 | None:intergenic | 25.0% |
| !!! | ATTGTTATTTCGTATGTATC+AGG | - | chr8_3:45159331-45159350 | Msa1290440:intron | 25.0% |
| !!! | TTGTTATTTCGTATGTATCA+GGG | - | chr8_3:45159332-45159351 | Msa1290440:intron | 25.0% |
| !! | ATAATGTTATCTGGAATCTT+TGG | - | chr8_3:45159362-45159381 | Msa1290440:intron | 25.0% |
| !! | TAATGTTATCTGGAATCTTT+GGG | - | chr8_3:45159363-45159382 | Msa1290440:intron | 25.0% |
| !! | ATAATTTCATGTTATTTGCG+AGG | - | chr8_3:45159430-45159449 | Msa1290440:intron | 25.0% |
| ! | ACATAAAAAATCCTAATGTG+CGG | + | chr8_3:45159487-45159506 | None:intergenic | 25.0% |
| !! | ATGATCTTTTTCTCAATTCT+TGG | - | chr8_3:45159653-45159672 | Msa1290440:intron | 25.0% |
| ! | GTGTATTCATTGAAATATTG+TGG | + | chr8_3:45160212-45160231 | None:intergenic | 25.0% |
| ! | TGTAAAATTGTCAAATGCAA+TGG | + | chr8_3:45160337-45160356 | None:intergenic | 25.0% |
| !! | GAGTTATTCTTTGTTTACAT+CGG | + | chr8_3:45160426-45160445 | None:intergenic | 25.0% |
| ! | AATTTGAATCTCTAGTTGAA+AGG | + | chr8_3:45160477-45160496 | None:intergenic | 25.0% |
| ! | AAAGGAACAAATATTTGTCA+AGG | + | chr8_3:45160522-45160541 | None:intergenic | 25.0% |
| CAAACAAGAAGTCAAGTTTA+AGG | + | chr8_3:45156405-45156424 | None:intergenic | 30.0% | |
| ATAATAAGAAAAATGGCAGG+AGG | - | chr8_3:45156686-45156705 | Msa1290440:CDS | 30.0% | |
| !!! | ACATCTTTTGGAACATTACA+TGG | - | chr8_3:45156890-45156909 | Msa1290440:intron | 30.0% |
| TCAAGAGTAAACTTTCTGTT+TGG | - | chr8_3:45156918-45156937 | Msa1290440:intron | 30.0% | |
| ! | CTTTTATGTTAATGAAGCTG+AGG | - | chr8_3:45157216-45157235 | Msa1290440:intron | 30.0% |
| !!! | ACTATTTCGATTATTTTGGC+TGG | - | chr8_3:45157551-45157570 | Msa1290440:intron | 30.0% |
| !! | AAGTGTTGAAGCAACTATAA+GGG | + | chr8_3:45157741-45157760 | None:intergenic | 30.0% |
| TCAACACTTCAAATTGTTCT+TGG | - | chr8_3:45157752-45157771 | Msa1290440:intron | 30.0% | |
| ATGATCAAGTGGTTTAGATA+GGG | + | chr8_3:45157821-45157840 | None:intergenic | 30.0% | |
| AATGATCAAGTGGTTTAGAT+AGG | + | chr8_3:45157822-45157841 | None:intergenic | 30.0% | |
| TCATCACGAATTTAGTACAT+AGG | - | chr8_3:45157870-45157889 | Msa1290440:CDS | 30.0% | |
| TTACCTGTGAAAATACTACT+AGG | + | chr8_3:45158241-45158260 | None:intergenic | 30.0% | |
| ACATGATGTTAGTAGATGAA+AGG | + | chr8_3:45158334-45158353 | None:intergenic | 30.0% | |
| ! | TCGATTTGCAGTTATATTCT+CGG | - | chr8_3:45158403-45158422 | Msa1290440:intron | 30.0% |
| TATGCTTATCTTCTTACTGT+TGG | - | chr8_3:45158443-45158462 | Msa1290440:intron | 30.0% | |
| AGTTTATAGATGAGAGCTTA+TGG | + | chr8_3:45158593-45158612 | None:intergenic | 30.0% | |
| AACAAACTACAATAGACACT+CGG | + | chr8_3:45159001-45159020 | None:intergenic | 30.0% | |
| AAAAAATGCATGGTTAGTGA+AGG | + | chr8_3:45159243-45159262 | None:intergenic | 30.0% | |
| !! | TCTTGGTAAGATTTTAATGC+TGG | - | chr8_3:45159670-45159689 | Msa1290440:CDS | 30.0% |
| ATGTGTAAGTTTCACTATCA+TGG | + | chr8_3:45159792-45159811 | None:intergenic | 30.0% | |
| ! | TGATAGTGAAACTTACACAT+CGG | - | chr8_3:45159792-45159811 | Msa1290440:CDS | 30.0% |
| ! | CTTTGTTTGATGTTTCTTGT+TGG | - | chr8_3:45159874-45159893 | Msa1290440:intron | 30.0% |
| TTGAACCTAAAAAGTTGTGA+TGG | - | chr8_3:45159899-45159918 | Msa1290440:intron | 30.0% | |
| ! | ATGATCCATCACAACTTTTT+AGG | + | chr8_3:45159907-45159926 | None:intergenic | 30.0% |
| CAATATAAAGCTGCAACTAT+TGG | + | chr8_3:45159978-45159997 | None:intergenic | 30.0% | |
| ! | TTGATAATACATACCCACAT+AGG | + | chr8_3:45160012-45160031 | None:intergenic | 30.0% |
| TATAGAGAATCCCATGAAAA+TGG | + | chr8_3:45160189-45160208 | None:intergenic | 30.0% | |
| TACACAGCATTTAAAAGCTA+TGG | - | chr8_3:45160227-45160246 | Msa1290440:intron | 30.0% | |
| TCAAATGCAATGGTTAATGT+AGG | + | chr8_3:45160327-45160346 | None:intergenic | 30.0% | |
| CAAAAACATTGCCAATAAAC+TGG | + | chr8_3:45160597-45160616 | None:intergenic | 30.0% | |
| ! | CAGTTTATTGGCAATGTTTT+TGG | - | chr8_3:45160595-45160614 | Msa1290440:five_prime_UTR | 30.0% |
| AATCAAACACGTAAAGATAG+AGG | - | chr8_3:45160641-45160660 | Msa1290440:five_prime_UTR | 30.0% | |
| TTGTATCTGTCTTGAATGAA+CGG | + | chr8_3:45160688-45160707 | None:intergenic | 30.0% | |
| TGAGGTTGAGAAATTGATGT+AGG | - | chr8_3:45156582-45156601 | Msa1290440:CDS | 35.0% | |
| GAGGTTGAGAAATTGATGTA+GGG | - | chr8_3:45156583-45156602 | Msa1290440:CDS | 35.0% | |
| !! | GTTCTCAGAAGTTTGAGTTT+TGG | - | chr8_3:45156647-45156666 | Msa1290440:CDS | 35.0% |
| AATTGATCTTTAACCGGATG+TGG | + | chr8_3:45156749-45156768 | None:intergenic | 35.0% | |
| AAGTTAAGTAACTTACGCCA+TGG | + | chr8_3:45156806-45156825 | None:intergenic | 35.0% | |
| AAGATGTGATATGAGGAAGA+AGG | + | chr8_3:45156877-45156896 | None:intergenic | 35.0% | |
| ! | CTTCCTCATATCACATCTTT+TGG | - | chr8_3:45156878-45156897 | Msa1290440:intron | 35.0% |
| GTTCCAAAAGATGTGATATG+AGG | + | chr8_3:45156884-45156903 | None:intergenic | 35.0% | |
| !! | ATTTGGTGTCTATGCTTCAT+AGG | + | chr8_3:45156952-45156971 | None:intergenic | 35.0% |
| GGTAATGTTGAAAACCAAGT+AGG | + | chr8_3:45157246-45157265 | None:intergenic | 35.0% | |
| ATCTAAAAGGAAGAAGCAAG+TGG | - | chr8_3:45157347-45157366 | Msa1290440:intron | 35.0% | |
| AGGCTCAATCATGATTCAAT+AGG | - | chr8_3:45157406-45157425 | Msa1290440:intron | 35.0% | |
| GATTCAGACTCTACTATTTG+TGG | - | chr8_3:45157445-45157464 | Msa1290440:intron | 35.0% | |
| !! | GAAGTGTTGAAGCAACTATA+AGG | + | chr8_3:45157742-45157761 | None:intergenic | 35.0% |
| !! | CAAATTGTTCTTGGCTTTAG+TGG | - | chr8_3:45157761-45157780 | Msa1290440:intron | 35.0% |
| GAAAGAGCAAAATGATCAAG+TGG | + | chr8_3:45157832-45157851 | None:intergenic | 35.0% | |
| GTATGAATTTGGATTTCCTG+TGG | - | chr8_3:45158072-45158091 | Msa1290440:CDS | 35.0% | |
| ! | ATTATAGCTTGCAAAATGCG+TGG | - | chr8_3:45158190-45158209 | Msa1290440:intron | 35.0% |
| ACTACTAGGATGATGATTTC+TGG | + | chr8_3:45158227-45158246 | None:intergenic | 35.0% | |
| ! | CATCCTAGTAGTATTTTCAC+AGG | - | chr8_3:45158235-45158254 | Msa1290440:intron | 35.0% |
| TACATTCCTCACATGATGAA+AGG | - | chr8_3:45158362-45158381 | Msa1290440:intron | 35.0% | |
| ! | TTTTCTCCTTTCATCATGTG+AGG | + | chr8_3:45158371-45158390 | None:intergenic | 35.0% |
| ACTGCAAATCGATCAAAGAT+AGG | + | chr8_3:45158395-45158414 | None:intergenic | 35.0% | |
| ATTTGCAGTTATATTCTCGG+TGG | - | chr8_3:45158406-45158425 | Msa1290440:intron | 35.0% | |
| TTTCAACTTAGTCCTTACCA+AGG | + | chr8_3:45158545-45158564 | None:intergenic | 35.0% | |
| GCGTATCTGAGTTTATCTAT+TGG | + | chr8_3:45158657-45158676 | None:intergenic | 35.0% | |
| !! | TGGTGAAACTTTTGCTATGA+TGG | - | chr8_3:45158761-45158780 | Msa1290440:CDS | 35.0% |
| TTCATTAGTTGCTCTAGTAG+AGG | - | chr8_3:45158788-45158807 | Msa1290440:CDS | 35.0% | |
| ! | TCACAACTACATGAGCTTTT+AGG | + | chr8_3:45158881-45158900 | None:intergenic | 35.0% |
| AGCTCATATACACTGATAAG+TGG | + | chr8_3:45159067-45159086 | None:intergenic | 35.0% | |
| ! | CAGAGTATTAGATGCAACAA+AGG | + | chr8_3:45159094-45159113 | None:intergenic | 35.0% |
| ! | TTTTATGTCTGCGACTGTAA+TGG | - | chr8_3:45159499-45159518 | Msa1290440:CDS | 35.0% |
| ! | TTTTTCTTCAGAGAGAATGC+AGG | - | chr8_3:45159572-45159591 | Msa1290440:intron | 35.0% |
| !!! | TTTTAGTGGTGTTGATGTGT+CGG | + | chr8_3:45159740-45159759 | None:intergenic | 35.0% |
| ! | TTAGGCTTCTCCATTTTCAT+GGG | - | chr8_3:45160176-45160195 | Msa1290440:intron | 35.0% |
| CATGTCATTGAACTGTCAAA+AGG | + | chr8_3:45160540-45160559 | None:intergenic | 35.0% | |
| CAAATGCTTCTGATGCAAAT+GGG | + | chr8_3:45160571-45160590 | None:intergenic | 35.0% | |
| ACAAATGCTTCTGATGCAAA+TGG | + | chr8_3:45160572-45160591 | None:intergenic | 35.0% | |
| ! | AGCATTTGTTGCCAGTTTAT+TGG | - | chr8_3:45160583-45160602 | Msa1290440:five_prime_UTR | 35.0% |
| GTAAAGATAGAGGAATGCAT+TGG | - | chr8_3:45160651-45160670 | Msa1290440:five_prime_UTR | 35.0% | |
| GTTCATTCAAGACAGATACA+AGG | - | chr8_3:45160687-45160706 | Msa1290440:five_prime_UTR | 35.0% | |
| CATGGTCTAATTACACAGAA+GGG | + | chr8_3:45160757-45160776 | None:intergenic | 35.0% | |
| ! | ATCTAGTTTCGTGTCTCTGT+CGG | - | chr8_3:45156539-45156558 | Msa1290440:CDS | 40.0% |
| ATAAGAAAAATGGCAGGAGG+TGG | - | chr8_3:45156689-45156708 | Msa1290440:CDS | 40.0% | |
| !! | AGTTCATCTAGCTTTGGTTG+TGG | + | chr8_3:45156722-45156741 | None:intergenic | 40.0% |
| ! | GGAAGAAGTTCATCTAGCTT+TGG | + | chr8_3:45156728-45156747 | None:intergenic | 40.0% |
| AGATGAACTTCTTCCACATC+CGG | - | chr8_3:45156733-45156752 | Msa1290440:intron | 40.0% | |
| TTAAGTAACTTACGCCATGG+AGG | + | chr8_3:45156803-45156822 | None:intergenic | 40.0% | |
| ATGTGATATGAGGAAGAAGG+AGG | + | chr8_3:45156874-45156893 | None:intergenic | 40.0% | |
| GTCTATGCTTCATAGGTCTA+CGG | + | chr8_3:45156945-45156964 | None:intergenic | 40.0% | |
| AGGTGTCAGTGTCTTGTATT+TGG | + | chr8_3:45156969-45156988 | None:intergenic | 40.0% | |
| CAACATTACCTTGTGATGCT+TGG | - | chr8_3:45157256-45157275 | Msa1290440:CDS | 40.0% | |
| GACGAGTTCCAAATGTTGTT+TGG | + | chr8_3:45157490-45157509 | None:intergenic | 40.0% | |
| ! | AGTTGTTGGCACAAAAGTGT+AGG | + | chr8_3:45157534-45157553 | None:intergenic | 40.0% |
| TGACATTGTGAATCCTCATG+AGG | - | chr8_3:45157583-45157602 | Msa1290440:intron | 40.0% | |
| ATTGTGAATCCTCATGAGGT+TGG | - | chr8_3:45157587-45157606 | Msa1290440:intron | 40.0% | |
| AAGATAATGAGGGGAACACA+GGG | - | chr8_3:45157713-45157732 | Msa1290440:intron | 40.0% | |
| !! | TTCTTGGCTTTAGTGGACTT+TGG | - | chr8_3:45157768-45157787 | Msa1290440:intron | 40.0% |
| !! | GGCTTTGGACTGTATGAATT+TGG | - | chr8_3:45158061-45158080 | Msa1290440:CDS | 40.0% |
| GTTGCAAATATGCATACCAC+AGG | + | chr8_3:45158091-45158110 | None:intergenic | 40.0% | |
| CTTGCAAAATGCGTGGAAAT+TGG | - | chr8_3:45158197-45158216 | Msa1290440:intron | 40.0% | |
| GCTTATCTTCTTACTGTTGG+TGG | - | chr8_3:45158446-45158465 | Msa1290440:intron | 40.0% | |
| GTTTCACCAGCATCAAATGT+TGG | + | chr8_3:45158750-45158769 | None:intergenic | 40.0% | |
| TTTCTTGTTCCACAGTCAAC+AGG | - | chr8_3:45159117-45159136 | Msa1290440:intron | 40.0% | |
| CTAAGAACTGAAGGTGGAAT+TGG | + | chr8_3:45159180-45159199 | None:intergenic | 40.0% | |
| ATTTCGTATGTATCAGGGAG+TGG | - | chr8_3:45159337-45159356 | Msa1290440:intron | 40.0% | |
| TTTCGTATGTATCAGGGAGT+GGG | - | chr8_3:45159338-45159357 | Msa1290440:intron | 40.0% | |
| GGAGTGGGAATAATGTTATC+TGG | - | chr8_3:45159353-45159372 | Msa1290440:intron | 40.0% | |
| ! | GTTATCTGGAATCTTTGGGA+CGG | - | chr8_3:45159367-45159386 | Msa1290440:intron | 40.0% |
| !! | TTATCTGGAATCTTTGGGAC+GGG | - | chr8_3:45159368-45159387 | Msa1290440:intron | 40.0% |
| GGATCATCAGTTTCTGTGTA+AGG | - | chr8_3:45159395-45159414 | Msa1290440:intron | 40.0% | |
| ACAAAGCACACTAGAACTGT+CGG | + | chr8_3:45159860-45159879 | None:intergenic | 40.0% | |
| ! | TTGCCTTTTCTTTGCCTATG+TGG | - | chr8_3:45159995-45160014 | Msa1290440:CDS | 40.0% |
| ! | TGCCTTTTCTTTGCCTATGT+GGG | - | chr8_3:45159996-45160015 | Msa1290440:CDS | 40.0% |
| TACCCACATAGGCAAAGAAA+AGG | + | chr8_3:45160001-45160020 | None:intergenic | 40.0% | |
| TGACATAACATAGGTTCTGC+AGG | - | chr8_3:45160101-45160120 | Msa1290440:intron | 40.0% | |
| ! | CTTAGGCTTCTCCATTTTCA+TGG | - | chr8_3:45160175-45160194 | Msa1290440:intron | 40.0% |
| CAATGGTTAATGTAGGACGA+AGG | + | chr8_3:45160320-45160339 | None:intergenic | 40.0% | |
| AAGATAGAGGAATGCATTGG+TGG | - | chr8_3:45160654-45160673 | Msa1290440:five_prime_UTR | 40.0% | |
| ! | AGATAGAGGAATGCATTGGT+GGG | - | chr8_3:45160655-45160674 | Msa1290440:five_prime_UTR | 40.0% |
| GCATGGTCTAATTACACAGA+AGG | + | chr8_3:45160758-45160777 | None:intergenic | 40.0% | |
| GTGTAATTAGACCATGCTCT+TGG | - | chr8_3:45160761-45160780 | Msa1290440:five_prime_UTR | 40.0% | |
| GTATTACAAGTCCTCCTCCA+TGG | - | chr8_3:45156786-45156805 | Msa1290440:intron | 45.0% | |
| CAGTTGTACCAAGCATCACA+AGG | + | chr8_3:45157267-45157286 | None:intergenic | 45.0% | |
| CAGACTCTACTATTTGTGGC+TGG | - | chr8_3:45157449-45157468 | Msa1290440:intron | 45.0% | |
| ! | ATTTGGAACTCGTCTACCTG+CGG | - | chr8_3:45157496-45157515 | Msa1290440:intron | 45.0% |
| GAAGATAATGAGGGGAACAC+AGG | - | chr8_3:45157712-45157731 | Msa1290440:intron | 45.0% | |
| !! | GACTCTCGCTCTTTTGATTG+TGG | - | chr8_3:45158160-45158179 | Msa1290440:intron | 45.0% |
| TATTCTCGGTGGCAATTGTG+TGG | - | chr8_3:45158417-45158436 | Msa1290440:intron | 45.0% | |
| ACAGATCGTGCCGGAATTAT+AGG | - | chr8_3:45158512-45158531 | Msa1290440:CDS | 45.0% | |
| !! | AGGAGCACCACCTATAATTC+CGG | + | chr8_3:45158525-45158544 | None:intergenic | 45.0% |
| GAATTATAGGTGGTGCTCCT+TGG | - | chr8_3:45158525-45158544 | Msa1290440:CDS | 45.0% | |
| AGTCCCGTATCCCTTTCAAT+GGG | - | chr8_3:45158719-45158738 | Msa1290440:intron | 45.0% | |
| TACAATAGACACTCGGCTCT+CGG | + | chr8_3:45158994-45159013 | None:intergenic | 45.0% | |
| !! | ATGAAAGCACCTGTTGACTG+TGG | + | chr8_3:45159129-45159148 | None:intergenic | 45.0% |
| GTGCTTTCATTGCTGTGTCA+AGG | - | chr8_3:45159139-45159158 | Msa1290440:intron | 45.0% | |
| ACACCTCTGCTAAGAACTGA+AGG | + | chr8_3:45159189-45159208 | None:intergenic | 45.0% | |
| ! | TCAGTTCTTAGCAGAGGTGT+AGG | - | chr8_3:45159189-45159208 | Msa1290440:CDS | 45.0% |
| ! | TTCTTAGCAGAGGTGTAGGT+TGG | - | chr8_3:45159193-45159212 | Msa1290440:CDS | 45.0% |
| !! | TATCTGGAATCTTTGGGACG+GGG | - | chr8_3:45159369-45159388 | Msa1290440:intron | 45.0% |
| CCGATATTTGAACAACCCTG+CGG | + | chr8_3:45159625-45159644 | None:intergenic | 45.0% | |
| CCGCAGGGTTGTTCAAATAT+CGG | - | chr8_3:45159622-45159641 | Msa1290440:intron | 45.0% | |
| AGGGTTGTTCAAATATCGGC+TGG | - | chr8_3:45159626-45159645 | Msa1290440:intron | 45.0% | |
| AAAGCTGCAACTATTGGTGC+TGG | + | chr8_3:45159972-45159991 | None:intergenic | 45.0% | |
| CATCGGTCTCTCTAGTTGAA+AGG | + | chr8_3:45160409-45160428 | None:intergenic | 45.0% | |
| AGTAACTTACGCCATGGAGG+AGG | + | chr8_3:45156800-45156819 | None:intergenic | 50.0% | |
| GAAGCTGAGGCAATCCTACT+TGG | - | chr8_3:45157229-45157248 | Msa1290440:intron | 50.0% | |
| ATCTGAGGGACTAGAGAGCT+TGG | + | chr8_3:45157298-45157317 | None:intergenic | 50.0% | |
| AAGCTCTCTAGTCCCTCAGA+TGG | - | chr8_3:45157297-45157316 | Msa1290440:CDS | 50.0% | |
| AGCTCTCTAGTCCCTCAGAT+GGG | - | chr8_3:45157298-45157317 | Msa1290440:CDS | 50.0% | |
| CATTTCCTCCTCCCATCTGA+GGG | + | chr8_3:45157312-45157331 | None:intergenic | 50.0% | |
| ACATTTCCTCCTCCCATCTG+AGG | + | chr8_3:45157313-45157332 | None:intergenic | 50.0% | |
| ACTCGTCTACCTGCGGTTAT+TGG | - | chr8_3:45157503-45157522 | Msa1290440:intron | 50.0% | |
| TAGGATCCTCCAATAACCGC+AGG | + | chr8_3:45157515-45157534 | None:intergenic | 50.0% | |
| TGCGACAAACCAACCTCATG+AGG | + | chr8_3:45157599-45157618 | None:intergenic | 50.0% | |
| GACTTTGGCGCAATGTAGTG+AGG | - | chr8_3:45157783-45157802 | Msa1290440:intron | 50.0% | |
| TCCTCTCTCTGCTGTTCCAT+TGG | - | chr8_3:45158027-45158046 | Msa1290440:intron | 50.0% | |
| ACCAATGGAACAGCAGAGAG+AGG | + | chr8_3:45158031-45158050 | None:intergenic | 50.0% | |
| ! | GTTCCATTGGTTGCTCTCTC+AGG | - | chr8_3:45158040-45158059 | Msa1290440:intron | 50.0% |
| AAGCCTGAGAGAGCAACCAA+TGG | + | chr8_3:45158046-45158065 | None:intergenic | 50.0% | |
| TTGGTTGCTCTCTCAGGCTT+TGG | - | chr8_3:45158046-45158065 | Msa1290440:intron | 50.0% | |
| ACATGTAGGACAGATCGTGC+CGG | - | chr8_3:45158503-45158522 | Msa1290440:CDS | 50.0% | |
| GATCGTGCCGGAATTATAGG+TGG | - | chr8_3:45158515-45158534 | Msa1290440:CDS | 50.0% | |
| ATAGGTGGTGCTCCTTGGTA+AGG | - | chr8_3:45158530-45158549 | Msa1290440:CDS | 50.0% | |
| GAGTCCCGTATCCCTTTCAA+TGG | - | chr8_3:45158718-45158737 | Msa1290440:intron | 50.0% | |
| GTCCCGTATCCCTTTCAATG+GGG | - | chr8_3:45158720-45158739 | Msa1290440:intron | 50.0% | |
| CTCCCCATTGAAAGGGATAC+GGG | + | chr8_3:45158725-45158744 | None:intergenic | 50.0% | |
| GCTCCCCATTGAAAGGGATA+CGG | + | chr8_3:45158726-45158745 | None:intergenic | 50.0% | |
| GTTGGAGCTCCCCATTGAAA+GGG | + | chr8_3:45158732-45158751 | None:intergenic | 50.0% | |
| TGTTGGAGCTCCCCATTGAA+AGG | + | chr8_3:45158733-45158752 | None:intergenic | 50.0% | |
| GGAGCTCCAACATTTGATGC+TGG | - | chr8_3:45158741-45158760 | Msa1290440:CDS | 50.0% | |
| CCTCTGCTAAGAACTGAAGG+TGG | + | chr8_3:45159186-45159205 | None:intergenic | 50.0% | |
| CCACCTTCAGTTCTTAGCAG+AGG | - | chr8_3:45159183-45159202 | Msa1290440:CDS | 50.0% | |
| CTAATGTGCGGCTGAAGTGA+GGG | + | chr8_3:45159475-45159494 | None:intergenic | 50.0% | |
| !! | CTCTTAGCTTTGACGCGTGT+AGG | - | chr8_3:45159596-45159615 | Msa1290440:intron | 50.0% |
| TGTACACACACGCGCAAGAT+GGG | - | chr8_3:45160253-45160272 | Msa1290440:intron | 50.0% | |
| CCATGCAAGTTCCAAGAGCA+TGG | + | chr8_3:45160775-45160794 | None:intergenic | 50.0% | |
| CCATGCTCTTGGAACTTGCA+TGG | - | chr8_3:45160772-45160791 | Msa1290440:five_prime_UTR | 50.0% | |
| TCTCTAGTCCCTCAGATGGG+AGG | - | chr8_3:45157301-45157320 | Msa1290440:CDS | 55.0% | |
| CGTCTACCTGCGGTTATTGG+AGG | - | chr8_3:45157506-45157525 | Msa1290440:intron | 55.0% | |
| ! | TAGCAGAGGTGTAGGTTGGC+AGG | - | chr8_3:45159197-45159216 | Msa1290440:CDS | 55.0% |
| !! | GGAATCTTTGGGACGGGGAA+TGG | - | chr8_3:45159374-45159393 | Msa1290440:intron | 55.0% |
| CCTAATGTGCGGCTGAAGTG+AGG | + | chr8_3:45159476-45159495 | None:intergenic | 55.0% | |
| CCTCACTTCAGCCGCACATT+AGG | - | chr8_3:45159473-45159492 | Msa1290440:CDS | 55.0% | |
| CATCTTGCGCGTGTGTGTAC+AGG | + | chr8_3:45160254-45160273 | None:intergenic | 55.0% | |
| CTGTACACACACGCGCAAGA+TGG | - | chr8_3:45160252-45160271 | Msa1290440:intron | 55.0% | |
| CTAGTCCCTCAGATGGGAGG+AGG | - | chr8_3:45157304-45157323 | Msa1290440:CDS | 60.0% | |
| GTGGATAGACACTCGAGCGC+AGG | + | chr8_3:45159048-45159067 | None:intergenic | 60.0% | |
| TGACGCGTGTAGGTAGCCGC+AGG | - | chr8_3:45159606-45159625 | Msa1290440:intron | 65.0% | |
| GACGCGTGTAGGTAGCCGCA+GGG | - | chr8_3:45159607-45159626 | Msa1290440:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 45156357 | 45160915 | 45156357 | ID=Msa1290440;Name=Msa1290440 |
| chr8_3 | mRNA | 45156357 | 45160915 | 45156357 | ID=Msa1290440-mRNA-1;Parent=Msa1290440;Name=Msa1290440-mRNA-1;_AED=0.15;_eAED=0.15;_QI=341|1|1|1|1|1|14|149|533 |
| chr8_3 | exon | 45156357 | 45156724 | 45156357 | ID=Msa1290440-mRNA-1:exon:12491;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45156998 | 45157158 | 45156998 | ID=Msa1290440-mRNA-1:exon:12490;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45157255 | 45157332 | 45157255 | ID=Msa1290440-mRNA-1:exon:12489;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45157598 | 45157689 | 45157598 | ID=Msa1290440-mRNA-1:exon:12488;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45157861 | 45157919 | 45157861 | ID=Msa1290440-mRNA-1:exon:12487;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45158054 | 45158140 | 45158054 | ID=Msa1290440-mRNA-1:exon:12486;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45158463 | 45158559 | 45158463 | ID=Msa1290440-mRNA-1:exon:12485;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45158726 | 45158910 | 45158726 | ID=Msa1290440-mRNA-1:exon:12484;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45159016 | 45159075 | 45159016 | ID=Msa1290440-mRNA-1:exon:12483;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45159179 | 45159254 | 45159179 | ID=Msa1290440-mRNA-1:exon:12482;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45159468 | 45159568 | 45159468 | ID=Msa1290440-mRNA-1:exon:12481;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45159668 | 45159844 | 45159668 | ID=Msa1290440-mRNA-1:exon:12480;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45159942 | 45160039 | 45159942 | ID=Msa1290440-mRNA-1:exon:12479;Parent=Msa1290440-mRNA-1 |
| chr8_3 | exon | 45160463 | 45160915 | 45160463 | ID=Msa1290440-mRNA-1:exon:12478;Parent=Msa1290440-mRNA-1 |
| chr8_3 | five_prime_UTR | 45160575 | 45160915 | 45160575 | ID=Msa1290440-mRNA-1:five_prime_utr;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45160463 | 45160574 | 45160463 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45159942 | 45160039 | 45159942 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45159668 | 45159844 | 45159668 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45159468 | 45159568 | 45159468 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45159179 | 45159254 | 45159179 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45159016 | 45159075 | 45159016 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45158726 | 45158910 | 45158726 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45158463 | 45158559 | 45158463 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45158054 | 45158140 | 45158054 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45157861 | 45157919 | 45157861 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45157598 | 45157689 | 45157598 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45157255 | 45157332 | 45157255 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45156998 | 45157158 | 45156998 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | CDS | 45156506 | 45156724 | 45156506 | ID=Msa1290440-mRNA-1:cds;Parent=Msa1290440-mRNA-1 |
| chr8_3 | three_prime_UTR | 45156357 | 45156505 | 45156357 | ID=Msa1290440-mRNA-1:three_prime_utr;Parent=Msa1290440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
