AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0509350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509350 MtrunA17_Chr3g0114241 83.601 622 34 4 515 1131 222 780 0.0 1038
Msa0509350 MtrunA17_Chr3g0114241 88.053 226 24 2 1 225 1 224 8.16e-117 380
Msa0509350 MtrunA17_Chr3g0118921 80.731 301 20 2 224 523 10 273 7.18e-149 448
Msa0509350 MtrunA17_Chr3g0118941 55.090 334 98 7 205 532 56 343 5.97e-95 307
Msa0509350 MtrunA17_Chr4g0020011 36.879 282 161 6 720 996 95 364 5.82e-50 182
Msa0509350 MtrunA17_Chr3g0090071 34.164 281 166 6 727 1002 114 380 1.43e-43 163
Msa0509350 MtrunA17_Chr4g0039291 34.296 277 169 5 723 996 109 375 4.51e-43 162
Msa0509350 MtrunA17_Chr6g0461131 36.500 200 112 6 220 407 110 306 1.37e-23 106
Msa0509350 MtrunA17_Chr7g0240091 28.342 187 128 2 778 964 222 402 6.82e-21 97.4
Msa0509350 MtrunA17_Chr7g0273611 36.774 155 89 3 262 407 1 155 1.97e-20 96.3
Msa0509350 MtrunA17_Chr4g0029001 36.842 171 97 4 262 423 1 169 3.89e-19 92.0
Msa0509350 MtrunA17_Chr2g0326721 36.257 171 98 4 262 423 1 169 1.36e-18 89.7
Msa0509350 MtrunA17_Chr2g0320711 29.150 247 152 7 727 964 157 389 8.27e-18 87.8
Msa0509350 MtrunA17_Chr7g0245261 30.000 190 115 4 775 963 103 275 2.69e-17 85.1
Msa0509350 MtrunA17_Chr6g0456181 44.538 119 62 2 288 405 1 116 3.52e-17 79.0
Msa0509350 MtrunA17_Chr2g0318431 27.888 251 160 6 719 963 173 408 2.36e-16 83.6
Msa0509350 MtrunA17_Chr7g0245291 27.749 191 120 4 775 964 110 283 2.06e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509350 AT2G40400.2 73.554 484 127 1 515 997 204 687 0.0 777
Msa0509350 AT2G40400.2 67.073 82 25 1 134 215 116 195 3.80e-28 122
Msa0509350 AT2G40400.1 73.554 484 127 1 515 997 204 687 0.0 777
Msa0509350 AT2G40400.1 67.073 82 25 1 134 215 116 195 3.80e-28 122
Msa0509350 AT3G56140.1 75.620 484 117 1 515 997 213 696 0.0 768
Msa0509350 AT3G56140.1 73.171 82 20 1 134 215 125 204 8.88e-30 127
Msa0509350 AT3G56140.3 75.620 484 117 1 515 997 213 696 0.0 768
Msa0509350 AT3G56140.3 73.171 82 20 1 134 215 125 204 8.88e-30 127
Msa0509350 AT3G56140.2 76.310 477 112 1 522 997 1 477 0.0 763
Msa0509350 AT2G40400.3 73.826 447 116 1 515 960 204 650 0.0 719
Msa0509350 AT2G40400.3 67.073 82 25 1 134 215 116 195 3.63e-28 122
Msa0509350 AT5G12470.1 35.252 278 171 5 720 996 101 370 5.86e-46 171
Msa0509350 AT2G37860.3 25.941 239 170 3 727 964 154 386 5.10e-21 97.8
Msa0509350 AT2G37860.4 25.941 239 170 3 727 964 154 386 5.10e-21 97.8
Msa0509350 AT5G22790.1 27.798 277 186 7 727 997 154 422 5.69e-21 97.8
Msa0509350 AT5G41070.1 31.579 209 124 5 262 456 1 204 1.87e-20 95.5
Msa0509350 AT3G26932.1 34.194 155 93 2 262 407 1 155 6.49e-19 90.5
Msa0509350 AT3G26932.2 34.194 155 93 2 262 407 1 155 6.49e-19 90.5
Msa0509350 AT2G28380.1 31.301 246 141 9 262 498 1 227 7.46e-19 91.3
Msa0509350 AT3G08640.1 28.272 191 119 5 776 964 106 280 1.33e-17 86.3
Msa0509350 AT3G08630.1 30.526 190 114 6 776 963 103 276 1.69e-17 85.9
Msa0509350 AT5G24690.1 27.099 262 167 6 719 973 172 416 3.65e-17 86.7
Msa0509350 AT3G62800.2 30.374 214 128 6 260 463 2 204 8.50e-17 84.0
Msa0509350 AT3G62800.1 30.374 214 128 6 260 463 2 204 8.50e-17 84.0
Msa0509350 AT3G62800.3 30.374 214 128 6 260 463 2 204 8.78e-17 83.6
Msa0509350 AT1G09700.2 37.013 154 85 5 264 406 17 169 1.79e-15 78.6
Msa0509350 AT1G09700.1 37.013 154 85 5 264 406 17 169 9.13e-15 78.6
Msa0509350 AT2G37860.2 23.858 197 146 2 727 922 154 347 1.29e-12 71.2
Msa0509350 AT2G37860.1 23.858 197 146 2 727 922 154 347 1.29e-12 71.2
Msa0509350 AT3G26932.3 39.535 86 51 1 322 407 13 97 6.62e-11 65.5

Find 260 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCGAATGAACTGTCTTTC+TGG 0.090777 3_4:-57806728 None:intergenic
TTATATTACATTGATGAATT+TGG 0.096192 3_4:-57810777 None:intergenic
TCTTCTTGATACAGGGTTTC+AGG 0.152745 3_4:+57807780 Msa0509350:intron
AATGCTAGAGTTGTTTATTT+AGG 0.154263 3_4:+57801703 Msa0509350:CDS
CGAATTGCATCAGTTGTATT+TGG 0.192343 3_4:+57808127 Msa0509350:CDS
TGAACGCTTGATTGTGAAAT+TGG 0.225625 3_4:-57809435 None:intergenic
ATGCTAGAGTTGTTTATTTA+GGG 0.270078 3_4:+57801704 Msa0509350:CDS
CATAAGATTGCAGCTTGATT+TGG 0.278656 3_4:-57810551 None:intergenic
TCAACACCAACAGATGAATA+TGG 0.285507 3_4:+57802972 Msa0509350:CDS
CCGAATCTGTCGTTTCCTTT+TGG 0.296078 3_4:+57806491 Msa0509350:CDS
TATATTACATTGATGAATTT+GGG 0.303406 3_4:-57810776 None:intergenic
CTCTATAAAAGAGGCAGAAC+AGG 0.314382 3_4:+57803355 Msa0509350:CDS
GCCGGTTCAGGCTTCATATC+AGG 0.318344 3_4:+57806428 Msa0509350:CDS
CATAAGATAGCAGCTTGATT+TGG 0.319979 3_4:-57810467 None:intergenic
CTTCAAAAGGGAATTGATCT+TGG 0.320765 3_4:+57807602 Msa0509350:CDS
CACGGACAATCAATTCTTAC+TGG 0.323981 3_4:+57809244 Msa0509350:CDS
TTTCTCATCAACAGATCTTA+AGG 0.326958 3_4:+57806342 Msa0509350:intron
GCATATTTACAAGAAATGTT+TGG 0.329508 3_4:-57809209 None:intergenic
AGAACCCAGTGGGGACAAAT+TGG 0.330231 3_4:+57808092 Msa0509350:CDS
ATCTGCAAATCTCCGTTATC+AGG 0.331816 3_4:+57808321 Msa0509350:CDS
AACTTTACTTCTCCTCTATC+AGG 0.337234 3_4:+57802219 Msa0509350:CDS
AGTTCTCTAATAGGACTTCT+TGG 0.338841 3_4:+57808043 Msa0509350:CDS
TGCTAGTCTTTGCAAGAACT+TGG 0.340316 3_4:-57807822 None:intergenic
AGAACTCACTCACCGTTTCC+AGG 0.340540 3_4:+57807685 Msa0509350:CDS
TTAACAATCGTTGCTTCAAC+TGG 0.344183 3_4:-57801559 None:intergenic
CGGCGGTGGAAGATGAGTTT+TGG 0.344399 3_4:-57801293 None:intergenic
TGCTTGTGTTTAACAACCTC+TGG 0.347683 3_4:-57804530 None:intergenic
TTCTTGAAGAGCTGGTAAAT+AGG 0.349154 3_4:+57810665 Msa0509350:three_prime_UTR
GTAGAGGGCTTGAAATTTCA+TGG 0.354174 3_4:+57804133 Msa0509350:CDS
GAGGTTGACACGGCGGCGTT+TGG 0.363665 3_4:-57801344 None:intergenic
CATATTTACAAGAAATGTTT+GGG 0.367643 3_4:-57809208 None:intergenic
AGGGGAAGCTGAACAAGTTC+CGG 0.369299 3_4:+57801723 Msa0509350:CDS
ATTAGAGAACTAATGTTATC+AGG 0.372366 3_4:-57808031 None:intergenic
TTAAACAAGTCAACTGAAAT+CGG 0.376092 3_4:-57803407 None:intergenic
GTTGGATTTATTTCAAGTAT+TGG 0.378068 3_4:+57808169 Msa0509350:CDS
GACGACAAGGGCAGCGGAGG+AGG 0.378501 3_4:+57801513 Msa0509350:CDS
ACATATGGAGCTAGAGGAAC+TGG 0.381829 3_4:+57806644 Msa0509350:CDS
TATGCACCTCCAGCCGGTTC+AGG 0.382397 3_4:+57806416 Msa0509350:CDS
TATAGTTGTATATGTTGGTT+TGG 0.388356 3_4:-57804065 None:intergenic
TTTGTTATGCAGATAATTGC+TGG 0.390425 3_4:+57809150 Msa0509350:intron
ATGTGAAAGTGGAGATGATT+TGG 0.395263 3_4:-57804840 None:intergenic
GATAACATTAGTTCTCTAAT+AGG 0.396181 3_4:+57808034 Msa0509350:CDS
ATCTTACAAAATATGCTTGA+TGG 0.396790 3_4:+57806575 Msa0509350:CDS
AGAGCTTGACTATGTTATTA+CGG 0.398518 3_4:+57807916 Msa0509350:CDS
GCTCGGGTTATGAATGCTGC+TGG 0.402906 3_4:+57806836 Msa0509350:CDS
GTCAAAGCAATTTCTGCTAC+AGG 0.405412 3_4:-57806801 None:intergenic
TGTTTGTTAGTGATGATTGC+TGG 0.407690 3_4:-57808241 None:intergenic
GCAATTTCTGCTACAGGGTC+TGG 0.409182 3_4:-57806795 None:intergenic
TTCTCTCTGCGGCGACGACA+AGG 0.409234 3_4:+57801500 Msa0509350:CDS
GTAAATAGGCACAAAGGAAT+AGG 0.413271 3_4:+57810679 Msa0509350:three_prime_UTR
TTTATAGAGTTGCAAAATGT+AGG 0.415156 3_4:-57803341 None:intergenic
TGAAGCAACGATTGTTAAAC+CGG 0.416130 3_4:+57801564 Msa0509350:CDS
ATGCGTTGTATAAGACTTCA+AGG 0.418219 3_4:-57805654 None:intergenic
TACAGATAAACGTTTGGATC+AGG 0.419846 3_4:+57804706 Msa0509350:intron
TTCAGTTGACTTGTTTAAGA+AGG 0.420320 3_4:+57803412 Msa0509350:CDS
CAACCGGCGAGGAGTGTTGA+TGG 0.420911 3_4:+57801447 Msa0509350:CDS
GGAAGTTCAGTATGTGAAAG+TGG 0.424893 3_4:-57804851 None:intergenic
TTGGCTTCAGGATCTTCAAA+AGG 0.426441 3_4:+57807589 Msa0509350:intron
TATTCCTACAGATAAACGTT+TGG 0.428725 3_4:+57804700 Msa0509350:intron
AGATATGAGCTTGGACCAAA+AGG 0.431226 3_4:-57806506 None:intergenic
AGATTCCAATTTGTCCCCAC+TGG 0.431706 3_4:-57808097 None:intergenic
TCATACTCCTGCCATCGTTC+AGG 0.432726 3_4:-57805683 None:intergenic
TCACGACAGTAACTAAGAAT+AGG 0.433080 3_4:-57805707 None:intergenic
GTTTGGCGCCGCGGAATTGT+CGG 0.433582 3_4:-57801327 None:intergenic
GGCGAATGAACTGTCTTTCT+GGG 0.434604 3_4:-57806727 None:intergenic
TTGACCGGGTTGAGATTGCT+CGG 0.437015 3_4:+57806819 Msa0509350:CDS
GGTTCGAGATGATAAAGAAT+TGG 0.438882 3_4:+57801744 Msa0509350:CDS
GTCATTGCCATGTTGGAGTC+AGG 0.440169 3_4:-57804884 None:intergenic
GAGAAAGAAGCCTGAGCATT+GGG 0.440199 3_4:-57801211 None:intergenic
GTTGTTTCCGTCGTGGTGTT+CGG 0.441955 3_4:-57801389 None:intergenic
AAGTGGACTCTCTAGAAGTT+TGG 0.443778 3_4:-57803018 None:intergenic
TTTGAACCATATTCATCTGT+TGG 0.445513 3_4:-57802978 None:intergenic
TCTATCTTCTTCACTTCCTC+CGG 0.445590 3_4:-57801583 None:intergenic
TGTTTACCCGTTATAATGAC+TGG 0.445692 3_4:-57803053 None:intergenic
CTTAGTTACTGTCGTGAAAA+CGG 0.452155 3_4:+57805713 Msa0509350:CDS
GGTCTAAAACTCGCTGGGGT+TGG 0.452644 3_4:+57808151 Msa0509350:CDS
GCCCACTAATTCCTTCTGCC+TGG 0.453363 3_4:-57806370 None:intergenic
GTTCTTCAGCACGAAGCAAC+CGG 0.455795 3_4:+57801431 Msa0509350:CDS
GCCTGATATGAAGCCTGAAC+CGG 0.457500 3_4:-57806429 None:intergenic
TTTGGTGGTCTAAAACTCGC+TGG 0.457995 3_4:+57808145 Msa0509350:CDS
CTTCTTGATACAGGGTTTCA+GGG 0.463114 3_4:+57807781 Msa0509350:intron
AGCGGAGGAGGAGAATATAA+AGG 0.463909 3_4:+57801525 Msa0509350:CDS
GCTCAGGCTTCTTTCTCCAC+AGG 0.465749 3_4:+57801217 Msa0509350:CDS
GAAGCTCCGGCGGCTAGAAA+CGG 0.466543 3_4:-57801472 None:intergenic
GGAAAGAGAAAGGGAAAGTG+TGG 0.466655 3_4:+57801668 Msa0509350:CDS
TAATTCTAGTAGTAAACTCT+TGG 0.469409 3_4:-57804023 None:intergenic
TTGGAGTCAGGAATTGTAGA+AGG 0.469711 3_4:-57804872 None:intergenic
TACGGCGATAGGTGAACCTT+TGG 0.473278 3_4:+57801639 Msa0509350:CDS
GCAGATAATTGCTGGGGTTG+TGG 0.473980 3_4:+57809158 Msa0509350:intron
GTAGCAGAAATTGCTTTGAC+CGG 0.474834 3_4:+57806804 Msa0509350:CDS
CAATCTCCAGTCATTATAAC+GGG 0.475504 3_4:+57803047 Msa0509350:CDS
GGTGCAAGCCATGTCACATA+TGG 0.477383 3_4:+57806629 Msa0509350:CDS
CATTGATGAATTTGGGATGT+GGG 0.481685 3_4:-57810769 None:intergenic
GACTCTATAGTTGTATATGT+TGG 0.482153 3_4:-57804070 None:intergenic
CCAAAAGGAAACGACAGATT+CGG 0.483422 3_4:-57806491 None:intergenic
TTGGTGGTCTAAAACTCGCT+GGG 0.483477 3_4:+57808146 Msa0509350:CDS
TAGGTGAACCTTTGGCGATA+GGG 0.483781 3_4:+57801647 Msa0509350:CDS
ATTGACCTTGCACGCTCTAC+CGG 0.484254 3_4:+57810395 Msa0509350:CDS
TTCTCTTTCCCTATCGCCAA+AGG 0.486815 3_4:-57801655 None:intergenic
GTAATTACCTACTTTGCGAC+AGG 0.488852 3_4:+57804918 Msa0509350:CDS
ATTGCATCAGTTGTATTTGG+TGG 0.489742 3_4:+57808130 Msa0509350:CDS
TGGCTTCAGGATCTTCAAAA+GGG 0.490844 3_4:+57807590 Msa0509350:intron
TGTGAAAGTGGAGATGATTT+GGG 0.492558 3_4:-57804839 None:intergenic
TTGTTATGCAGATAATTGCT+GGG 0.493083 3_4:+57809151 Msa0509350:intron
GGAGAATATAAAGGAGAATA+CGG 0.495999 3_4:+57801534 Msa0509350:CDS
GATTCCAATTTGTCCCCACT+GGG 0.496606 3_4:-57808096 None:intergenic
TTATAGAGTTGCAAAATGTA+GGG 0.496654 3_4:-57803340 None:intergenic
TGATCTTGGTTTAGTATCAC+CGG 0.498342 3_4:+57807616 Msa0509350:CDS
AATTCTTTATCATCTCGAAC+CGG 0.500639 3_4:-57801742 None:intergenic
GGGTTTCAGGGAAAGATTGT+TGG 0.502306 3_4:+57807793 Msa0509350:intron
TGCGGCGACGACAAGGGCAG+CGG 0.502380 3_4:+57801507 Msa0509350:CDS
AATACAAATTTACCTGGAAA+CGG 0.504032 3_4:-57807697 None:intergenic
GTCCAGGCAGAAGGAATTAG+TGG 0.505797 3_4:+57806368 Msa0509350:CDS
ATGCTTGATGGAGGGGCCAC+CGG 0.507280 3_4:+57806587 Msa0509350:CDS
ATGGCGCCGTTTCTAGCCGC+CGG 0.507479 3_4:+57801466 Msa0509350:CDS
CTCTAGCTCCATATGTGACA+TGG 0.508607 3_4:-57806637 None:intergenic
ACAAAATATGCTTGATGGAG+GGG 0.508686 3_4:+57806580 Msa0509350:CDS
TTGAAATGCATTGTCAGGGA+TGG 0.509174 3_4:-57808068 None:intergenic
GAAAGTAAGTCACGTGCGGC+GGG 0.513194 3_4:-57801240 None:intergenic
TTGGCGATAGGGAAAGAGAA+AGG 0.514879 3_4:+57801658 Msa0509350:CDS
ACGGACAATCAATTCTTACT+GGG 0.519712 3_4:+57809245 Msa0509350:CDS
AGGAATGATAAAGTTGGTGC+AGG 0.519719 3_4:-57807983 None:intergenic
CATTGAACCTGTCGCAAAGT+AGG 0.520101 3_4:-57804925 None:intergenic
GAATCTGATGTAGGTGGCTC+AGG 0.521983 3_4:-57810443 None:intergenic
CGTTCATATGAAAATGTGTA+TGG 0.524584 3_4:+57809452 Msa0509350:CDS
CGTTCATATGAAAATGTGTA+TGG 0.524584 3_4:+57809491 Msa0509350:CDS
TGAGAAAGAGTACCTGATAG+AGG 0.525248 3_4:-57802231 None:intergenic
ACATATACAACTATAGAGTC+TGG 0.525751 3_4:+57804073 Msa0509350:CDS
CACGGCGGCGTTTGGCGCCG+CGG 0.526669 3_4:-57801336 None:intergenic
GTTCTCTAAATACCTGATAA+CGG 0.527581 3_4:-57808333 None:intergenic
ACAATCTCCAGTCATTATAA+CGG 0.528866 3_4:+57803046 Msa0509350:CDS
GGAGAAAGAAGCCTGAGCAT+TGG 0.530325 3_4:-57801212 None:intergenic
ATAGGTGAACCTTTGGCGAT+AGG 0.532642 3_4:+57801646 Msa0509350:CDS
GCTAGTCTTTGCAAGAACTT+GGG 0.533750 3_4:-57807821 None:intergenic
GAATCTGATGAAGGTGGCTC+AGG 0.534682 3_4:-57810527 None:intergenic
GAAACAAACCTTCGGAGTTG+AGG 0.537538 3_4:-57804556 None:intergenic
ATAAGTATACAACTAAGCTA+TGG 0.537813 3_4:-57810731 None:intergenic
TAGGAAAGGAATGATAAAGT+TGG 0.537940 3_4:-57807989 None:intergenic
CAAAGACTAGCAATAGAAGA+AGG 0.538188 3_4:+57807833 Msa0509350:CDS
GACTGTCATGGCAGGATGGA+TGG 0.539731 3_4:+57805626 Msa0509350:intron
TTGGCCGCCTGAACGATGGC+AGG 0.541105 3_4:+57805676 Msa0509350:CDS
ACATTGATGAATTTGGGATG+TGG 0.544086 3_4:-57810770 None:intergenic
ATATACGATGCTACGGCGAT+AGG 0.545909 3_4:+57801628 Msa0509350:CDS
TTGCTGGGGTTGTGGAGCAT+CGG 0.546344 3_4:+57809166 Msa0509350:CDS
GGAAGGTACGGCACGTGAGA+CGG 0.547035 3_4:-57801272 None:intergenic
CGCATTGGCCGCCTGAACGA+TGG 0.549145 3_4:+57805672 Msa0509350:CDS
TGAAGGTGGCTCAGGTGACT+CGG 0.549801 3_4:-57810519 None:intergenic
TCTTAGCTGTGTTGATGGAG+AGG 0.549896 3_4:-57801363 None:intergenic
ACTGGAGATTGTGCAGGAAG+TGG 0.550615 3_4:-57803035 None:intergenic
TGAATGCTGCTGGGCAGAGA+CGG 0.550691 3_4:+57806846 Msa0509350:CDS
TTAAGGACTGTCCAGGCAGA+AGG 0.552482 3_4:+57806359 Msa0509350:CDS
GTTGTAAGTCATTGCCATGT+TGG 0.553559 3_4:-57804891 None:intergenic
GGGCTTGAAATTTCATGGAA+AGG 0.553836 3_4:+57804138 Msa0509350:CDS
GAATGCTGCTGGGCAGAGAC+GGG 0.554415 3_4:+57806847 Msa0509350:CDS
GAGACGGGATGCCCTCCCAC+AGG 0.554747 3_4:+57806862 Msa0509350:CDS
TCTCTCTGCGGCGACGACAA+GGG 0.556290 3_4:+57801501 Msa0509350:CDS
TGTAGGTGGCTCAGGTGACT+CGG 0.556660 3_4:-57810435 None:intergenic
ACAGATCTTAAGGACTGTCC+AGG 0.556803 3_4:+57806352 Msa0509350:intron
AAATTATATGCACCTCCAGC+CGG 0.558669 3_4:+57806410 Msa0509350:CDS
AGTCACGTGCGGCGGGCCTG+TGG 0.560414 3_4:-57801233 None:intergenic
GGCGACGACAAGGGCAGCGG+AGG 0.562155 3_4:+57801510 Msa0509350:CDS
TGACCGGGTTGAGATTGCTC+GGG 0.562769 3_4:+57806820 Msa0509350:CDS
GATGAGATTAAAAGTGAATG+AGG 0.563793 3_4:+57810599 Msa0509350:CDS
AGAGAGAAGAAATGAAGCTC+CGG 0.564132 3_4:-57801485 None:intergenic
TACAAAATATGCTTGATGGA+GGG 0.564237 3_4:+57806579 Msa0509350:CDS
CATATGGAGCTAGAGGAACT+GGG 0.567576 3_4:+57806645 Msa0509350:CDS
GGAATCCGTCTTGTTGCTTG+TGG 0.568003 3_4:+57805734 Msa0509350:CDS
GAAAGAGAAAGGGAAAGTGT+GGG 0.568024 3_4:+57801669 Msa0509350:CDS
TTACTCAACTGTGGAAGTAG+AGG 0.568281 3_4:+57804117 Msa0509350:CDS
TACTCAACTGTGGAAGTAGA+GGG 0.568657 3_4:+57804118 Msa0509350:CDS
AAGAAGTTCTGCAATACCTC+CGG 0.571472 3_4:-57807635 None:intergenic
CTCGGGTTATGAATGCTGCT+GGG 0.571983 3_4:+57806837 Msa0509350:CDS
TTACAAAATATGCTTGATGG+AGG 0.573219 3_4:+57806578 Msa0509350:CDS
GGAAAGCTTTCATAGCAGCT+TGG 0.573638 3_4:-57802194 None:intergenic
TACTCCTGCCATCGTTCAGG+CGG 0.574643 3_4:-57805680 None:intergenic
TAGCAGAAATTGCTTTGACC+GGG 0.576460 3_4:+57806805 Msa0509350:CDS
AAGCTCATATCTATCTGCAC+AGG 0.578491 3_4:+57806517 Msa0509350:CDS
TGCTTGTGGTACTCCACTGA+AGG 0.579264 3_4:+57805748 Msa0509350:CDS
GGTCTTTCTAACTTGCAGTC+CGG 0.579868 3_4:-57810414 None:intergenic
GGTCTTTGTAACTTGCAGTC+CGG 0.579868 3_4:-57810498 None:intergenic
GCAGTCCGGTAGAGCGTGCA+AGG 0.580957 3_4:-57810400 None:intergenic
AAATTTGAACATACCTTCAG+TGG 0.581152 3_4:-57805761 None:intergenic
AGACAGTTCATTCGCCGTGA+GGG 0.581170 3_4:+57806734 Msa0509350:CDS
TGATTTGGAGAATCTGATGT+AGG 0.581495 3_4:-57810452 None:intergenic
TGGCGATAGGGAAAGAGAAA+GGG 0.582792 3_4:+57801659 Msa0509350:CDS
TCTAGTAGTAAACTCTTGGA+CGG 0.583403 3_4:-57804019 None:intergenic
GGAGGAAGTGAAGAAGATAG+AGG 0.583668 3_4:+57801585 Msa0509350:CDS
AGGAATTAGTGGGCTAACAA+AGG 0.584204 3_4:+57806379 Msa0509350:CDS
TGAAAGTAAGTCACGTGCGG+CGG 0.586751 3_4:-57801241 None:intergenic
TGAAGTCTTATACAACGCAT+TGG 0.586922 3_4:+57805657 Msa0509350:CDS
TGATTTGGAGAATCTGATGA+AGG 0.587198 3_4:-57810536 None:intergenic
GAACACCACGACGGAAACAA+CGG 0.587520 3_4:+57801391 Msa0509350:CDS
GCTATCTTATGCAACTCTAC+CGG 0.590768 3_4:+57810479 Msa0509350:CDS
ATCGAGGATATACGATGCTA+CGG 0.591448 3_4:+57801621 Msa0509350:CDS
TCTATCTGCACAGGCTAGAG+TGG 0.591577 3_4:+57806526 Msa0509350:CDS
GATATGAAGCCTGAACCGGC+TGG 0.591682 3_4:-57806425 None:intergenic
TGTGCAGATAGATATGAGCT+TGG 0.597352 3_4:-57806515 None:intergenic
CGCAATTGACTCATCAGCAT+AGG 0.597542 3_4:-57808008 None:intergenic
TTAACTTTGACATCATCAGT+AGG 0.599887 3_4:-57804737 None:intergenic
GCATTTCAAAAGAACCCAGT+GGG 0.600369 3_4:+57808082 Msa0509350:CDS
TTGACTCATCAGCATAGGAA+AGG 0.600777 3_4:-57808003 None:intergenic
TCACTAACAAACAGATTGCA+AGG 0.600933 3_4:+57808251 Msa0509350:CDS
CATGTCACATATGGAGCTAG+AGG 0.602908 3_4:+57806638 Msa0509350:CDS
CAATTCTTACTGGGGAACGC+AGG 0.606143 3_4:+57809254 Msa0509350:CDS
TCAAAGCAATTTCTGCTACA+GGG 0.606508 3_4:-57806800 None:intergenic
TTGTTGATTTCTTTACAGTG+TGG 0.609596 3_4:+57807957 Msa0509350:CDS
TGCTAGAGTTGTTTATTTAG+GGG 0.610896 3_4:+57801705 Msa0509350:CDS
GTATACAACTAAGCTATGGA+AGG 0.612490 3_4:-57810727 None:intergenic
ATAATGACTGGAGATTGTGC+AGG 0.618830 3_4:-57803041 None:intergenic
TGGTGGTCTAAAACTCGCTG+GGG 0.619487 3_4:+57808147 Msa0509350:CDS
CGACGCCGTTGTTTCCGTCG+TGG 0.620705 3_4:-57801396 None:intergenic
GCGCCATCAACACTCCTCGC+CGG 0.627563 3_4:-57801450 None:intergenic
GGAAGTGAAGAAGATAGAGG+AGG 0.629985 3_4:+57801588 Msa0509350:CDS
TACAATTCCTGACTCCAACA+TGG 0.630054 3_4:+57804877 Msa0509350:CDS
TCATATGAAAATGTGTATGG+TGG 0.634309 3_4:+57809455 Msa0509350:CDS
TCATATGAAAATGTGTATGG+TGG 0.634309 3_4:+57809494 Msa0509350:CDS
AGTCACAACTATCAACATAC+CGG 0.634556 3_4:-57806606 None:intergenic
CAATCGGCTTACTTAAGATG+AGG 0.641540 3_4:-57809345 None:intergenic
TGAAAATGTGTATGGTGGAG+TGG 0.641617 3_4:+57809460 Msa0509350:CDS
TGAAAATGTGTATGGTGGAG+TGG 0.641617 3_4:+57809499 Msa0509350:CDS
TATTAGCACAGTATCAGAAG+CGG 0.643218 3_4:+57807876 Msa0509350:CDS
AAGAAAACCGAACACCACGA+CGG 0.643908 3_4:+57801382 Msa0509350:CDS
TAAAGATGAAGAGCTCATGT+TGG 0.645494 3_4:-57804816 None:intergenic
ATAGAGGAGAAGTAAAGTTG+CGG 0.645561 3_4:-57802215 None:intergenic
TGGCCAACTAACCTGTGGGA+GGG 0.648648 3_4:-57806873 None:intergenic
TAACCCGAGCAATCTCAACC+CGG 0.649576 3_4:-57806823 None:intergenic
AAGCAGATCCTCAACTCCGA+AGG 0.650374 3_4:+57804548 Msa0509350:CDS
ACAATCAACTCTTGAACCAG+AGG 0.651341 3_4:+57804514 Msa0509350:CDS
TCCAGGCAGAAGGAATTAGT+GGG 0.651684 3_4:+57806369 Msa0509350:CDS
ATGGCCAACTAACCTGTGGG+AGG 0.651841 3_4:-57806874 None:intergenic
GAGCTGGTAAATAGGCACAA+AGG 0.658070 3_4:+57810673 Msa0509350:three_prime_UTR
GTTATTACGGACACTGTCAG+AGG 0.660546 3_4:+57807929 Msa0509350:CDS
CTAGAATTAACACAGAGAGA+AGG 0.661368 3_4:+57804037 Msa0509350:CDS
TGTTATGCAGATAATTGCTG+GGG 0.662537 3_4:+57809152 Msa0509350:intron
GAGAAGAAATGAAGCTCCGG+CGG 0.664149 3_4:-57801482 None:intergenic
GCGAACTTATTACTCAACTG+TGG 0.664739 3_4:+57804108 Msa0509350:CDS
AGCTTCATTTCTTCTCTCTG+CGG 0.667380 3_4:+57801489 Msa0509350:CDS
GGTATGTTGATAGTTGTGAC+TGG 0.667974 3_4:+57806608 Msa0509350:CDS
CGGCACGTGAGACGGTTACG+CGG 0.668728 3_4:-57801264 None:intergenic
GAGTACCACAAGCAACAAGA+CGG 0.670544 3_4:-57805739 None:intergenic
AAGACAGTTCATTCGCCGTG+AGG 0.674905 3_4:+57806733 Msa0509350:CDS
AGCAACGATTGTTAAACCGG+AGG 0.676125 3_4:+57801567 Msa0509350:CDS
AGGTGGAATTGAAATGTATG+CGG 0.676440 3_4:+57804457 Msa0509350:intron
TTTGGAGAATCTGATGTAGG+TGG 0.683114 3_4:-57810449 None:intergenic
CGGACAATCAATTCTTACTG+GGG 0.691240 3_4:+57809246 Msa0509350:CDS
CACAACTATCAACATACCGG+TGG 0.692061 3_4:-57806603 None:intergenic
CAACAGGAACTTCTCCCTCA+CGG 0.692731 3_4:-57806748 None:intergenic
CGGTGAAAGTAAGTCACGTG+CGG 0.694390 3_4:-57801244 None:intergenic
TGTTGATGGAGAGGTTGACA+CGG 0.696936 3_4:-57801354 None:intergenic
ATATGGAGCTAGAGGAACTG+GGG 0.700000 3_4:+57806646 Msa0509350:CDS
TCTTGGTTTAGTATCACCGG+AGG 0.703286 3_4:+57807619 Msa0509350:CDS
ATGAAGCCTGAACCGGCTGG+AGG 0.705896 3_4:-57806422 None:intergenic
TTTGGAGAATCTGATGAAGG+TGG 0.706792 3_4:-57810533 None:intergenic
TGCATTTCAAAAGAACCCAG+TGG 0.707372 3_4:+57808081 Msa0509350:CDS
ATTTCTGCTACAGGGTCTGG+CGG 0.715985 3_4:-57806792 None:intergenic
TCAGCACGAAGCAACCGGCG+AGG 0.717218 3_4:+57801436 Msa0509350:CDS
TGATGGAGAGGTTGACACGG+CGG 0.732999 3_4:-57801351 None:intergenic
AGGAGGAAGTGATAACATCG+AGG 0.747187 3_4:+57801605 Msa0509350:CDS
TGAGTGAGTTCTGAAAGCAG+AGG 0.753513 3_4:-57807674 None:intergenic
CATTTCAAAAGAACCCAGTG+GGG 0.761830 3_4:+57808083 Msa0509350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGTATAATCTATTTATA+TGG - chr3_4:57803807-57803826 None:intergenic 10.0%
!!! TTTAGTTTTTTAGTTTTTTT+TGG + chr3_4:57805461-57805480 Msa0509350:intron 10.0%
!!! ATTTTTCAAATCTAATTTTT+TGG + chr3_4:57810353-57810372 Msa0509350:intron 10.0%
!! ATAACTAATTATCATGATAA+AGG + chr3_4:57801944-57801963 Msa0509350:intron 15.0%
!!! TTAAATTGATAACTAGATAT+TGG + chr3_4:57803486-57803505 Msa0509350:intron 15.0%
!! TATTCTATTACTGATAAATT+GGG - chr3_4:57803596-57803615 None:intergenic 15.0%
!! ATATTCTATTACTGATAAAT+TGG - chr3_4:57803597-57803616 None:intergenic 15.0%
!!! TTTATTTTTCTTTCATTCAT+AGG + chr3_4:57804241-57804260 Msa0509350:intron 15.0%
!! TGATAAGTAATATATACTAT+TGG - chr3_4:57804593-57804612 None:intergenic 15.0%
!! AGTTTATGAAAAATAACTTA+TGG - chr3_4:57805253-57805272 None:intergenic 15.0%
!!! TTAAAATTTTAAAATCCTTG+TGG - chr3_4:57805965-57805984 None:intergenic 15.0%
!!! TTCAATGTTTTAAATTTGTT+GGG + chr3_4:57806192-57806211 Msa0509350:intron 15.0%
!! CAGAAAAAATAATTCATAAA+AGG - chr3_4:57807045-57807064 None:intergenic 15.0%
!!! TTATGAATTATTTTTTCTGT+AGG + chr3_4:57807046-57807065 Msa0509350:intron 15.0%
!! TATTATTGCTGAATTTAATT+TGG + chr3_4:57808688-57808707 Msa0509350:intron 15.0%
!!! ATTATTGCTGAATTTAATTT+GGG + chr3_4:57808689-57808708 Msa0509350:intron 15.0%
!! GGTTATTTAAATTTAATACA+TGG + chr3_4:57809830-57809849 Msa0509350:intron 15.0%
!! ATATACAAATTTCTCATTAA+AGG + chr3_4:57810087-57810106 Msa0509350:intron 15.0%
!! TATATTACATTGATGAATTT+GGG - chr3_4:57810779-57810798 None:intergenic 15.0%
!! TTATATTACATTGATGAATT+TGG - chr3_4:57810780-57810799 None:intergenic 15.0%
!! NNGGATAAACAGTTTATTTA+CGG - chr3_4:57801983-57802002 None:intergenic 20.0%
!!! ATAGAATTTTGTTATGGAAT+TGG + chr3_4:57802490-57802509 Msa0509350:intron 20.0%
!! TAGAAACATTCATATAAAAG+TGG - chr3_4:57802732-57802751 None:intergenic 20.0%
!! AAGGAAAACAATATGATTAT+AGG + chr3_4:57802886-57802905 Msa0509350:intron 20.0%
!! AGATAATGTTGAAATAGAAA+AGG - chr3_4:57803156-57803175 None:intergenic 20.0%
!! ATGATCATAAAATGTCAATT+TGG - chr3_4:57803467-57803486 None:intergenic 20.0%
!! AATAAGCTGAAAAAAACTTA+TGG - chr3_4:57803706-57803725 None:intergenic 20.0%
!! AATTATATCAATGTGTTTGA+AGG + chr3_4:57803893-57803912 Msa0509350:intron 20.0%
!!! GATTTTTATCCAATTTATTC+AGG + chr3_4:57803985-57804004 Msa0509350:intron 20.0%
!! ATATAGCTGAATGTTTATAT+AGG + chr3_4:57804384-57804403 Msa0509350:intron 20.0%
!!! TCATCTTCATTTTTTTGTTA+GGG - chr3_4:57804796-57804815 None:intergenic 20.0%
!! ACTTAATAAGCACTTAATTA+AGG - chr3_4:57805212-57805231 None:intergenic 20.0%
!!! AATAAGAGCATAACAAAAAT+CGG - chr3_4:57805442-57805461 None:intergenic 20.0%
!!! AATTTATGTTTCTTTTACCT+TGG + chr3_4:57805520-57805539 Msa0509350:intron 20.0%
!! AAAAACCTAATTCATAGATT+AGG - chr3_4:57806014-57806033 None:intergenic 20.0%
!!! TAGGTTTTTCATAATATTTG+AGG + chr3_4:57806025-57806044 Msa0509350:intron 20.0%
!!! GTTCAATGTTTTAAATTTGT+TGG + chr3_4:57806191-57806210 Msa0509350:intron 20.0%
!!! TTTTTCTTTTCCTTAAATGT+TGG + chr3_4:57807209-57807228 Msa0509350:intron 20.0%
!! TAAAGGATGATTACATTAAA+GGG - chr3_4:57807519-57807538 None:intergenic 20.0%
!!! AACATGATTATATTTCCTTT+TGG + chr3_4:57807570-57807589 Msa0509350:intron 20.0%
!! TCAAAAAATACAAATTTACC+TGG - chr3_4:57807706-57807725 None:intergenic 20.0%
!!! GCATTTTTCCTTTAAATTAT+TGG - chr3_4:57808629-57808648 None:intergenic 20.0%
!!! CTAAGACACTTTTTATTATT+GGG - chr3_4:57808791-57808810 None:intergenic 20.0%
!!! TCTAAGACACTTTTTATTAT+TGG - chr3_4:57808792-57808811 None:intergenic 20.0%
!! CATATTTACAAGAAATGTTT+GGG - chr3_4:57809211-57809230 None:intergenic 20.0%
!! AAGTACAACAAATTATACAT+TGG + chr3_4:57809707-57809726 Msa0509350:intron 20.0%
!! AGTACAACAAATTATACATT+GGG + chr3_4:57809708-57809727 Msa0509350:intron 20.0%
!!! TGCTTACTATTAATTTTTCA+AGG + chr3_4:57809972-57809991 Msa0509350:intron 20.0%
!! ATGAGAAATTTGTATATGAA+AGG - chr3_4:57810084-57810103 None:intergenic 20.0%
!! CTCTAAGTTAAAATTTAACA+TGG - chr3_4:57810113-57810132 None:intergenic 20.0%
! AATGCTAGAGTTGTTTATTT+AGG + chr3_4:57801703-57801722 Msa0509350:CDS 25.0%
! ATGCTAGAGTTGTTTATTTA+GGG + chr3_4:57801704-57801723 Msa0509350:CDS 25.0%
!! TTATCCATATACTGATTAAG+TGG - chr3_4:57801865-57801884 None:intergenic 25.0%
! GAAAACATCAGAAGAATTAA+AGG - chr3_4:57802151-57802170 None:intergenic 25.0%
!! CAATTTTTCTAATCTTTCCT+TGG + chr3_4:57802252-57802271 Msa0509350:intron 25.0%
!! GACTACATAGAATTTTGTTA+TGG + chr3_4:57802484-57802503 Msa0509350:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr3_4:57802614-57802633 Msa0509350:intron 25.0%
! ATATGATTATAGGAACTAGT+AGG + chr3_4:57802896-57802915 Msa0509350:intron 25.0%
!!! TCAGTTTTGATTGTAAAAAC+AGG - chr3_4:57803269-57803288 None:intergenic 25.0%
!! TTTTTACAATCAAAACTGAG+AGG + chr3_4:57803270-57803289 Msa0509350:CDS 25.0%
! TTATAGAGTTGCAAAATGTA+GGG - chr3_4:57803343-57803362 None:intergenic 25.0%
! TTTATAGAGTTGCAAAATGT+AGG - chr3_4:57803344-57803363 None:intergenic 25.0%
!! ATTTTGCAACTCTATAAAAG+AGG + chr3_4:57803346-57803365 Msa0509350:CDS 25.0%
! TTAAACAAGTCAACTGAAAT+CGG - chr3_4:57803410-57803429 None:intergenic 25.0%
! GAATCACATAAGAAATTTCA+AGG - chr3_4:57803445-57803464 None:intergenic 25.0%
! AATATCTACTTAAACTTGTG+AGG + chr3_4:57803612-57803631 Msa0509350:intron 25.0%
! ATTAAGCTGTTTATCAAAAC+AGG + chr3_4:57803864-57803883 Msa0509350:intron 25.0%
! TTAAGCTGTTTATCAAAACA+GGG + chr3_4:57803865-57803884 Msa0509350:intron 25.0%
! AAGATTCATCCTGAATAAAT+TGG - chr3_4:57803997-57804016 None:intergenic 25.0%
! TAATTCTAGTAGTAAACTCT+TGG - chr3_4:57804026-57804045 None:intergenic 25.0%
!! TATAGTTGTATATGTTGGTT+TGG - chr3_4:57804068-57804087 None:intergenic 25.0%
!! AATGAACTTACACTCTTTTA+AGG - chr3_4:57804218-57804237 None:intergenic 25.0%
!! TAAAAGAGTGTAAGTTCATT+CGG + chr3_4:57804218-57804237 Msa0509350:intron 25.0%
! TTATATCGACGTAATAATAG+AGG - chr3_4:57804285-57804304 None:intergenic 25.0%
!! TCAAAGCTTAATCATTTTCA+TGG - chr3_4:57804418-57804437 None:intergenic 25.0%
!! GTGTATTACAACTTTGAAAA+AGG - chr3_4:57804649-57804668 None:intergenic 25.0%
!!! ATCTTCATTTTTTTGTTAGG+GGG - chr3_4:57804794-57804813 None:intergenic 25.0%
!!! CATCTTCATTTTTTTGTTAG+GGG - chr3_4:57804795-57804814 None:intergenic 25.0%
!!! GTCATCTTCATTTTTTTGTT+AGG - chr3_4:57804797-57804816 None:intergenic 25.0%
! TCTAGCAATGACAAAAATAT+AGG - chr3_4:57805569-57805588 None:intergenic 25.0%
!!! CATTATCTTCTGAAATTTTC+TGG + chr3_4:57805816-57805835 Msa0509350:intron 25.0%
! AAAGACCTAATCTATGAATT+AGG + chr3_4:57806006-57806025 Msa0509350:intron 25.0%
!!! TTCACCCTTTTGTTTAATTT+GGG - chr3_4:57806053-57806072 None:intergenic 25.0%
! AGATCAGATAATATGTTGAA+AGG + chr3_4:57806125-57806144 Msa0509350:intron 25.0%
! GATCAGATAATATGTTGAAA+GGG + chr3_4:57806126-57806145 Msa0509350:intron 25.0%
!! AATTTAAAACATTGAACGCA+AGG - chr3_4:57806188-57806207 None:intergenic 25.0%
!! ATCAAGCATATTTTGTAAGA+TGG - chr3_4:57806576-57806595 None:intergenic 25.0%
! ATCTTACAAAATATGCTTGA+TGG + chr3_4:57806575-57806594 Msa0509350:CDS 25.0%
!! AATTTTCTTGATATTCTTGC+AGG - chr3_4:57806674-57806693 None:intergenic 25.0%
!! CAATTTTGTATCACCAAAAT+GGG - chr3_4:57806985-57807004 None:intergenic 25.0%
!! TCAATTTTGTATCACCAAAA+TGG - chr3_4:57806986-57807005 None:intergenic 25.0%
! AAACAGAAACATCAAGTAAA+AGG - chr3_4:57807104-57807123 None:intergenic 25.0%
!!! TTTTACTTGATGTTTCTGTT+TGG + chr3_4:57807103-57807122 Msa0509350:intron 25.0%
! CTAAAGGATGATTACATTAA+AGG - chr3_4:57807520-57807539 None:intergenic 25.0%
! AATACAAATTTACCTGGAAA+CGG - chr3_4:57807700-57807719 None:intergenic 25.0%
! ATTAGAGAACTAATGTTATC+AGG - chr3_4:57808034-57808053 None:intergenic 25.0%
!! GATAACATTAGTTCTCTAAT+AGG + chr3_4:57808034-57808053 Msa0509350:CDS 25.0%
!! GTTGGATTTATTTCAAGTAT+TGG + chr3_4:57808169-57808188 Msa0509350:CDS 25.0%
! TAAAAGACGTAAAAGAAGAT+TGG + chr3_4:57808387-57808406 Msa0509350:intron 25.0%
!!! CAACTAGTTTTTAAAGATAC+AGG - chr3_4:57808586-57808605 None:intergenic 25.0%
!! GTATCTTTAAAAACTAGTTG+TGG + chr3_4:57808586-57808605 Msa0509350:intron 25.0%
! ATGACTCACCAATAATTTAA+AGG + chr3_4:57808618-57808637 Msa0509350:intron 25.0%
! AACTTCAGTATTAATACAGA+AGG - chr3_4:57809122-57809141 None:intergenic 25.0%
! GCATATTTACAAGAAATGTT+TGG - chr3_4:57809212-57809231 None:intergenic 25.0%
!! ATATGCTATCTTTTGTATCA+CGG + chr3_4:57809226-57809245 Msa0509350:CDS 25.0%
!! TGTTTGAACCCTATAATTTT+CGG + chr3_4:57809368-57809387 Msa0509350:intron 25.0%
! CTTGATATCCGAAAATTATA+GGG - chr3_4:57809379-57809398 None:intergenic 25.0%
! ACTTGATATCCGAAAATTAT+AGG - chr3_4:57809380-57809399 None:intergenic 25.0%
!!! TTTAGTTTTGTGATAGAAAG+AGG + chr3_4:57809569-57809588 Msa0509350:intron 25.0%
! GTAGTATGTGAACTTAATAT+TGG + chr3_4:57809615-57809634 Msa0509350:intron 25.0%
! TATGTGAACTTAATATTGGA+AGG + chr3_4:57809619-57809638 Msa0509350:intron 25.0%
! ATGTGAACTTAATATTGGAA+GGG + chr3_4:57809620-57809639 Msa0509350:intron 25.0%
! GTACAACAAATTATACATTG+GGG + chr3_4:57809709-57809728 Msa0509350:intron 25.0%
!!! GTGAAGATTATTTTTTCACT+TGG + chr3_4:57809733-57809752 Msa0509350:intron 25.0%
! GTTAAAGAAGGATTCAAAAA+TGG - chr3_4:57809764-57809783 None:intergenic 25.0%
! ATTAAGGCAATTGTTAAAGA+AGG - chr3_4:57809776-57809795 None:intergenic 25.0%
! TTCTTTAACAATTGCCTTAA+TGG + chr3_4:57809775-57809794 Msa0509350:intron 25.0%
! ATCCTTAAAAAGTGATTTAG+AGG + chr3_4:57809915-57809934 Msa0509350:intron 25.0%
!!! TACCTCTAAATCACTTTTTA+AGG - chr3_4:57809920-57809939 None:intergenic 25.0%
! ATTAAATATTCCCAACTTCA+GGG + chr3_4:57810018-57810037 Msa0509350:intron 25.0%
! AATTTGTATATGAAAGGAGA+TGG - chr3_4:57810078-57810097 None:intergenic 25.0%
! TTGACTTTCCTTTAATTGAA+GGG - chr3_4:57810168-57810187 None:intergenic 25.0%
!! ATTGACTTTCCTTTAATTGA+AGG - chr3_4:57810169-57810188 None:intergenic 25.0%
! AATTACGACAATAAAGTTGA+AGG + chr3_4:57810186-57810205 Msa0509350:intron 25.0%
! ATTACGACAATAAAGTTGAA+GGG + chr3_4:57810187-57810206 Msa0509350:intron 25.0%
! AAATTACTTACCAAACTTAC+AGG - chr3_4:57810228-57810247 None:intergenic 25.0%
!! CAAAATAATTCTCTCTTTTG+AGG - chr3_4:57810264-57810283 None:intergenic 25.0%
!!! TATAGGTTCTAAATTTGACT+AGG + chr3_4:57810330-57810349 Msa0509350:intron 25.0%
!!! TATTTTTTTTCTTGAAGAGC+TGG + chr3_4:57810657-57810676 Msa0509350:three_prime_UTR 25.0%
! ATAAGTATACAACTAAGCTA+TGG - chr3_4:57810734-57810753 None:intergenic 25.0%
GGAGAATATAAAGGAGAATA+CGG + chr3_4:57801534-57801553 Msa0509350:CDS 30.0%
TGCTAGAGTTGTTTATTTAG+GGG + chr3_4:57801705-57801724 Msa0509350:CDS 30.0%
AATTCTTTATCATCTCGAAC+CGG - chr3_4:57801745-57801764 None:intergenic 30.0%
! TGTTGATAAGCGTTTATCAT+TGG + chr3_4:57801807-57801826 Msa0509350:intron 30.0%
GGAAAATATACATGCTTGTT+TGG - chr3_4:57802834-57802853 None:intergenic 30.0%
TTTGAACCATATTCATCTGT+TGG - chr3_4:57802981-57803000 None:intergenic 30.0%
ACAATCTCCAGTCATTATAA+CGG + chr3_4:57803046-57803065 Msa0509350:CDS 30.0%
!!! GTTTTGATTGTAAAAACAGG+TGG - chr3_4:57803266-57803285 None:intergenic 30.0%
!! TTCAGTTGACTTGTTTAAGA+AGG + chr3_4:57803412-57803431 Msa0509350:CDS 30.0%
! GATAACATATTTCTGAGCTA+AGG + chr3_4:57803515-57803534 Msa0509350:intron 30.0%
TTTGAGAGATTAAACTTGTG+AGG + chr3_4:57803642-57803661 Msa0509350:intron 30.0%
!!! CTTATTTTGATTAGCTTGCT+AGG + chr3_4:57803720-57803739 Msa0509350:intron 30.0%
GACTCTATAGTTGTATATGT+TGG - chr3_4:57804073-57804092 None:intergenic 30.0%
ACATATACAACTATAGAGTC+TGG + chr3_4:57804073-57804092 Msa0509350:CDS 30.0%
!!! ATCAATATCTGCCTGTTTTT+TGG - chr3_4:57804173-57804192 None:intergenic 30.0%
ATAATATTATTGTCTTGCGC+AGG + chr3_4:57804437-57804456 Msa0509350:intron 30.0%
! TGCTTGATTTTCTTTGTTAG+AGG - chr3_4:57804492-57804511 None:intergenic 30.0%
AAGATGAAGAAACAAACCTT+CGG - chr3_4:57804567-57804586 None:intergenic 30.0%
TTGTAATACACTGATCATTG+AGG + chr3_4:57804658-57804677 Msa0509350:intron 30.0%
TATTCCTACAGATAAACGTT+TGG + chr3_4:57804700-57804719 Msa0509350:intron 30.0%
TTAACTTTGACATCATCAGT+AGG - chr3_4:57804740-57804759 None:intergenic 30.0%
!!! ATTTTTTTGTTAGGGGGAAT+TGG - chr3_4:57804788-57804807 None:intergenic 30.0%
AACTATCTTGATGAGCTTAT+TGG + chr3_4:57805269-57805288 Msa0509350:intron 30.0%
AATACATCAGAAAGAGCTTA+TGG + chr3_4:57805292-57805311 Msa0509350:intron 30.0%
TACTTGAATGTGTTTGAGAA+AGG - chr3_4:57805341-57805360 None:intergenic 30.0%
CAAAATAAACTTGACTGTCA+TGG + chr3_4:57805614-57805633 Msa0509350:intron 30.0%
AAATTTGAACATACCTTCAG+TGG - chr3_4:57805764-57805783 None:intergenic 30.0%
!!! TATCTTCTGAAATTTTCTGG+TGG + chr3_4:57805819-57805838 Msa0509350:intron 30.0%
TGACTTACCATAGATTCAAA+TGG + chr3_4:57805905-57805924 Msa0509350:intron 30.0%
ATGCTTACCATTTGAATCTA+TGG - chr3_4:57805915-57805934 None:intergenic 30.0%
AGATTAAAGAATAGACCACA+AGG + chr3_4:57805947-57805966 Msa0509350:intron 30.0%
AGGTTCCCAAATTAAACAAA+AGG + chr3_4:57806045-57806064 Msa0509350:intron 30.0%
GGTTCCCAAATTAAACAAAA+GGG + chr3_4:57806046-57806065 Msa0509350:intron 30.0%
!! GTTCACCCTTTTGTTTAATT+TGG - chr3_4:57806054-57806073 None:intergenic 30.0%
TTTCTCATCAACAGATCTTA+AGG + chr3_4:57806342-57806361 Msa0509350:intron 30.0%
! CATATTTTGTAAGATGGTCT+GGG - chr3_4:57806570-57806589 None:intergenic 30.0%
TTACAAAATATGCTTGATGG+AGG + chr3_4:57806578-57806597 Msa0509350:CDS 30.0%
TACAAAATATGCTTGATGGA+GGG + chr3_4:57806579-57806598 Msa0509350:CDS 30.0%
AAGCTAATAAGTGAACGAAA+TGG - chr3_4:57806896-57806915 None:intergenic 30.0%
TAAAGGGCTTAAATTTGGAA+GGG - chr3_4:57806949-57806968 None:intergenic 30.0%
ATAAAGGGCTTAAATTTGGA+AGG - chr3_4:57806950-57806969 None:intergenic 30.0%
TTCTGTAGGCAATATAACTT+TGG + chr3_4:57807060-57807079 Msa0509350:intron 30.0%
AATCTCACTTCCAACATTTA+AGG - chr3_4:57807222-57807241 None:intergenic 30.0%
CAATATATGATCTAAGCACT+TGG + chr3_4:57807252-57807271 Msa0509350:intron 30.0%
! CACTTGGACTTTAAACTTTT+GGG + chr3_4:57807268-57807287 Msa0509350:intron 30.0%
!! TACATTGATTCCAAGTGTTT+AGG + chr3_4:57807375-57807394 Msa0509350:intron 30.0%
!! ACATTGATTCCAAGTGTTTA+GGG + chr3_4:57807376-57807395 Msa0509350:intron 30.0%
! CAGTGGTAACTAGTTTAAAT+TGG + chr3_4:57807418-57807437 Msa0509350:intron 30.0%
AAATCTGATGATTAGGTAGT+TGG + chr3_4:57807446-57807465 Msa0509350:intron 30.0%
AATCTGATGATTAGGTAGTT+GGG + chr3_4:57807447-57807466 Msa0509350:intron 30.0%
AATGTAATCATCCTTTAGAC+AGG + chr3_4:57807522-57807541 Msa0509350:intron 30.0%
!!! TTATATTTCCTTTTGGCTTC+AGG + chr3_4:57807577-57807596 Msa0509350:intron 30.0%
TGAGATTATTTCATCACTCT+CGG + chr3_4:57807751-57807770 Msa0509350:intron 30.0%
AGAGCTTGACTATGTTATTA+CGG + chr3_4:57807916-57807935 Msa0509350:CDS 30.0%
!! TTGTTGATTTCTTTACAGTG+TGG + chr3_4:57807957-57807976 Msa0509350:CDS 30.0%
TAGGAAAGGAATGATAAAGT+TGG - chr3_4:57807992-57808011 None:intergenic 30.0%
!!! TCTTTTGAAATGCATTGTCA+GGG - chr3_4:57808075-57808094 None:intergenic 30.0%
!!! TTCTTTTGAAATGCATTGTC+AGG - chr3_4:57808076-57808095 None:intergenic 30.0%
!!! GTTGTTTATGCACTTTTTCT+TGG + chr3_4:57808295-57808314 Msa0509350:CDS 30.0%
GTTCTCTAAATACCTGATAA+CGG - chr3_4:57808336-57808355 None:intergenic 30.0%
CTGTGTCAATAATCATATAC+TGG - chr3_4:57808504-57808523 None:intergenic 30.0%
CAGTATATGATTATTGACAC+AGG + chr3_4:57808502-57808521 Msa0509350:intron 30.0%
GTAAATGAGTCTCACAAATA+AGG - chr3_4:57808741-57808760 None:intergenic 30.0%
TAACAGTATTGTAAGTTGCA+AGG - chr3_4:57808901-57808920 None:intergenic 30.0%
GCAACCAAAAATTCCAATTT+AGG + chr3_4:57809085-57809104 Msa0509350:intron 30.0%
! CAGACCTAAATTGGAATTTT+TGG - chr3_4:57809092-57809111 None:intergenic 30.0%
! TTTGTTATGCAGATAATTGC+TGG + chr3_4:57809150-57809169 Msa0509350:intron 30.0%
TTGTTATGCAGATAATTGCT+GGG + chr3_4:57809151-57809170 Msa0509350:intron 30.0%
TTATAGGGTTCAAACACAAT+CGG - chr3_4:57809364-57809383 None:intergenic 30.0%
CGTTCATATGAAAATGTGTA+TGG + chr3_4:57809452-57809471 Msa0509350:CDS 30.0%
TCATATGAAAATGTGTATGG+TGG + chr3_4:57809455-57809474 Msa0509350:CDS 30.0%
CGTTCATATGAAAATGTGTA+TGG + chr3_4:57809452-57809471 Msa0509350:CDS 30.0%
TCATATGAAAATGTGTATGG+TGG + chr3_4:57809455-57809474 Msa0509350:CDS 30.0%
ATTCCATAACAAGATCTCTT+AGG - chr3_4:57809662-57809681 None:intergenic 30.0%
TTTATCTTCGGTTTCAACAT+AGG + chr3_4:57809809-57809828 Msa0509350:intron 30.0%
CATTAAATATTCCCAACTTC+AGG + chr3_4:57810017-57810036 Msa0509350:intron 30.0%
TATATGAAAGGAGATGGTAT+TGG - chr3_4:57810072-57810091 None:intergenic 30.0%
! AGTAGATGCTCTAAGTTAAA+AGG - chr3_4:57810144-57810163 None:intergenic 30.0%
TGACTTTCCTTTAATTGAAG+GGG - chr3_4:57810167-57810186 None:intergenic 30.0%
TAACTAATGTCCTGTAAGTT+TGG + chr3_4:57810215-57810234 Msa0509350:intron 30.0%
GAAACCAAGATAGCATAATT+TGG + chr3_4:57810283-57810302 Msa0509350:intron 30.0%
CAATCCAAATTATGCTATCT+TGG - chr3_4:57810290-57810309 None:intergenic 30.0%
TTAATCATTCATCTGCGTAT+AGG + chr3_4:57810313-57810332 Msa0509350:intron 30.0%
GATGAGATTAAAAGTGAATG+AGG + chr3_4:57810599-57810618 Msa0509350:CDS 30.0%
ATTACAACAAAAATGTCGCA+CGG - chr3_4:57810634-57810653 None:intergenic 30.0%
!!! AAGATGAGTTTTGGAAGGTA+CGG - chr3_4:57801287-57801306 None:intergenic 35.0%
! AATTGTCGGAGTTTTTCGTT+CGG - chr3_4:57801316-57801335 None:intergenic 35.0%
TTAACAATCGTTGCTTCAAC+TGG - chr3_4:57801562-57801581 None:intergenic 35.0%
TGAAGCAACGATTGTTAAAC+CGG + chr3_4:57801564-57801583 Msa0509350:CDS 35.0%
GGTTCGAGATGATAAAGAAT+TGG + chr3_4:57801744-57801763 Msa0509350:CDS 35.0%
GGAACCACTTAATCAGTATA+TGG + chr3_4:57801858-57801877 Msa0509350:intron 35.0%
ATAGAGGAGAAGTAAAGTTG+CGG - chr3_4:57802218-57802237 None:intergenic 35.0%
AACTTTACTTCTCCTCTATC+AGG + chr3_4:57802219-57802238 Msa0509350:CDS 35.0%
! GATCTTGTAGTTGAGACTTT+TGG + chr3_4:57802285-57802304 Msa0509350:intron 35.0%
AGAGTGAAATGATTCTCTGA+TGG + chr3_4:57802432-57802451 Msa0509350:intron 35.0%
! TGATTCTCTGATGGTATTGA+AGG + chr3_4:57802441-57802460 Msa0509350:intron 35.0%
! GATTCTCTGATGGTATTGAA+GGG + chr3_4:57802442-57802461 Msa0509350:intron 35.0%
!! TTTGATTCCACTTTTGAACG+AGG + chr3_4:57802570-57802589 Msa0509350:intron 35.0%
! TTGCCTCTACAATTGAGTTT+TGG + chr3_4:57802686-57802705 Msa0509350:intron 35.0%
ATGCCAAAACTCAATTGTAG+AGG - chr3_4:57802692-57802711 None:intergenic 35.0%
!! ATGCTTGTTTGGTTCTTCTA+TGG - chr3_4:57802823-57802842 None:intergenic 35.0%
CAATGTTACTCTAATGTGTG+TGG + chr3_4:57802926-57802945 Msa0509350:intron 35.0%
TCAACACCAACAGATGAATA+TGG + chr3_4:57802972-57802991 Msa0509350:CDS 35.0%
CAATCTCCAGTCATTATAAC+GGG + chr3_4:57803047-57803066 Msa0509350:CDS 35.0%
TGTTTACCCGTTATAATGAC+TGG - chr3_4:57803056-57803075 None:intergenic 35.0%
TGCTGCAAAAATTGCTTTGA+GGG + chr3_4:57803379-57803398 Msa0509350:CDS 35.0%
! ACATATTTCTGAGCTAAGGT+TGG + chr3_4:57803519-57803538 Msa0509350:intron 35.0%
! CATATTTCTGAGCTAAGGTT+GGG + chr3_4:57803520-57803539 Msa0509350:intron 35.0%
TCTAGTAGTAAACTCTTGGA+CGG - chr3_4:57804022-57804041 None:intergenic 35.0%
CTAGAATTAACACAGAGAGA+AGG + chr3_4:57804037-57804056 Msa0509350:CDS 35.0%
CATATGTTTCAGTGTCTTGT+CGG + chr3_4:57804306-57804325 Msa0509350:intron 35.0%
! TTTCAGGCATATTTGGTGAT+CGG - chr3_4:57804334-57804353 None:intergenic 35.0%
AGGTGGAATTGAAATGTATG+CGG + chr3_4:57804457-57804476 Msa0509350:intron 35.0%
TGATCCAAACGTTTATCTGT+AGG - chr3_4:57804707-57804726 None:intergenic 35.0%
TACAGATAAACGTTTGGATC+AGG + chr3_4:57804706-57804725 Msa0509350:intron 35.0%
TAAAGATGAAGAGCTCATGT+TGG - chr3_4:57804819-57804838 None:intergenic 35.0%
TGTGAAAGTGGAGATGATTT+GGG - chr3_4:57804842-57804861 None:intergenic 35.0%
ATGTGAAAGTGGAGATGATT+TGG - chr3_4:57804843-57804862 None:intergenic 35.0%
AATCAGAAGTCTTCGTCATT+TGG - chr3_4:57805043-57805062 None:intergenic 35.0%
ATGCGTTGTATAAGACTTCA+AGG - chr3_4:57805657-57805676 None:intergenic 35.0%
! TGAAGTCTTATACAACGCAT+TGG + chr3_4:57805657-57805676 Msa0509350:CDS 35.0%
TCACGACAGTAACTAAGAAT+AGG - chr3_4:57805710-57805729 None:intergenic 35.0%
CTTAGTTACTGTCGTGAAAA+CGG + chr3_4:57805713-57805732 Msa0509350:CDS 35.0%
!!! TTCTGAAATTTTCTGGTGGT+GGG + chr3_4:57805823-57805842 Msa0509350:intron 35.0%
AGATTCAAATGGTAAGCATG+TGG + chr3_4:57805916-57805935 Msa0509350:intron 35.0%
! CAAAAGGGTGAACATGATTT+TGG + chr3_4:57806061-57806080 Msa0509350:intron 35.0%
! GAAACTTGCTTTATGCAGTA+TGG + chr3_4:57806083-57806102 Msa0509350:intron 35.0%
TATGTTGAAAGGGTGAATGA+TGG + chr3_4:57806136-57806155 Msa0509350:intron 35.0%
TGAATGATGGCAAGAGAATT+AGG + chr3_4:57806149-57806168 Msa0509350:intron 35.0%
! GCATATTTTGTAAGATGGTC+TGG - chr3_4:57806571-57806590 None:intergenic 35.0%
ACAAAATATGCTTGATGGAG+GGG + chr3_4:57806580-57806599 Msa0509350:CDS 35.0%
AGTCACAACTATCAACATAC+CGG - chr3_4:57806609-57806628 None:intergenic 35.0%
!!! TTCCTGTTGCTGATTTTTTG+TGG + chr3_4:57806762-57806781 Msa0509350:CDS 35.0%
TACCACAAAAAATCAGCAAC+AGG - chr3_4:57806767-57806786 None:intergenic 35.0%
TCAAAGCAATTTCTGCTACA+GGG - chr3_4:57806803-57806822 None:intergenic 35.0%
AAAGGGCTTAAATTTGGAAG+GGG - chr3_4:57806948-57806967 None:intergenic 35.0%
GCACATAAAGGGCTTAAATT+TGG - chr3_4:57806954-57806973 None:intergenic 35.0%
TGGTGAAATGTTAATTGACG+TGG + chr3_4:57807123-57807142 Msa0509350:intron 35.0%
! GCACTTGGACTTTAAACTTT+TGG + chr3_4:57807267-57807286 Msa0509350:intron 35.0%
!! TGGACTTTAAACTTTTGGGA+TGG + chr3_4:57807272-57807291 Msa0509350:intron 35.0%
!!! GGACTTTAAACTTTTGGGAT+GGG + chr3_4:57807273-57807292 Msa0509350:intron 35.0%
!! CATTGATTCCAAGTGTTTAG+GGG + chr3_4:57807377-57807396 Msa0509350:intron 35.0%
! ATTGATTCCAAGTGTTTAGG+GGG + chr3_4:57807378-57807397 Msa0509350:intron 35.0%
AATTATACCCCCTAAACACT+TGG - chr3_4:57807388-57807407 None:intergenic 35.0%
GGTTGCAAAATCTGATGATT+AGG + chr3_4:57807439-57807458 Msa0509350:intron 35.0%
TAATCATCCTTTAGACAGGA+TGG + chr3_4:57807526-57807545 Msa0509350:intron 35.0%
CTTCAAAAGGGAATTGATCT+TGG + chr3_4:57807602-57807621 Msa0509350:CDS 35.0%
TGATCTTGGTTTAGTATCAC+CGG + chr3_4:57807616-57807635 Msa0509350:CDS 35.0%
CAAAGACTAGCAATAGAAGA+AGG + chr3_4:57807833-57807852 Msa0509350:CDS 35.0%
TATTAGCACAGTATCAGAAG+CGG + chr3_4:57807876-57807895 Msa0509350:CDS 35.0%
AGTTCTCTAATAGGACTTCT+TGG + chr3_4:57808043-57808062 Msa0509350:CDS 35.0%
CGAATTGCATCAGTTGTATT+TGG + chr3_4:57808127-57808146 Msa0509350:CDS 35.0%
ATTGCATCAGTTGTATTTGG+TGG + chr3_4:57808130-57808149 Msa0509350:CDS 35.0%
! TGTTTGTTAGTGATGATTGC+TGG - chr3_4:57808244-57808263 None:intergenic 35.0%
TCACTAACAAACAGATTGCA+AGG + chr3_4:57808251-57808270 Msa0509350:CDS 35.0%
!!! ACAACTGCTGTTTTGAGTAT+TGG - chr3_4:57808280-57808299 None:intergenic 35.0%
ACAGGACAAAGTTTGCAATT+TGG + chr3_4:57808520-57808539 Msa0509350:intron 35.0%
GTATGTTGACATTTGAAAGC+AGG + chr3_4:57808551-57808570 Msa0509350:intron 35.0%
TTGGGTCTCACTAAATTATG+AGG + chr3_4:57808707-57808726 Msa0509350:intron 35.0%
TGGGTCTCACTAAATTATGA+GGG + chr3_4:57808708-57808727 Msa0509350:intron 35.0%
TGTGAGACTCATTTACAAAG+TGG + chr3_4:57808745-57808764 Msa0509350:intron 35.0%
GTGCAGATGAAGAAATAGAA+AGG - chr3_4:57808964-57808983 None:intergenic 35.0%
GTCTGCTGTGTAATTATTTG+AGG + chr3_4:57808987-57809006 Msa0509350:intron 35.0%
TGTTATGCAGATAATTGCTG+GGG + chr3_4:57809152-57809171 Msa0509350:intron 35.0%
ACGGACAATCAATTCTTACT+GGG + chr3_4:57809245-57809264 Msa0509350:CDS 35.0%
TGAACGCTTGATTGTGAAAT+TGG - chr3_4:57809438-57809457 None:intergenic 35.0%
AAAGAGGAGAAATTCACTTC+TGG + chr3_4:57809585-57809604 Msa0509350:intron 35.0%
ATCTACTCCCCTTCAATTAA+AGG + chr3_4:57810157-57810176 Msa0509350:intron 35.0%
! TGATTTGGAGAATCTGATGT+AGG - chr3_4:57810455-57810474 None:intergenic 35.0%
CATAAGATAGCAGCTTGATT+TGG - chr3_4:57810470-57810489 None:intergenic 35.0%
! TGATTTGGAGAATCTGATGA+AGG - chr3_4:57810539-57810558 None:intergenic 35.0%
CATAAGATTGCAGCTTGATT+TGG - chr3_4:57810554-57810573 None:intergenic 35.0%
! ACTTTTAATCTCATCGATGC+TGG - chr3_4:57810594-57810613 None:intergenic 35.0%
TTACAACAAAAATGTCGCAC+GGG - chr3_4:57810633-57810652 None:intergenic 35.0%
TTCTTGAAGAGCTGGTAAAT+AGG + chr3_4:57810665-57810684 Msa0509350:three_prime_UTR 35.0%
GTAAATAGGCACAAAGGAAT+AGG + chr3_4:57810679-57810698 Msa0509350:three_prime_UTR 35.0%
GTATACAACTAAGCTATGGA+AGG - chr3_4:57810730-57810749 None:intergenic 35.0%
! CATTGATGAATTTGGGATGT+GGG - chr3_4:57810772-57810791 None:intergenic 35.0%
! ACATTGATGAATTTGGGATG+TGG - chr3_4:57810773-57810792 None:intergenic 35.0%
! GGTTTTCTTAGCTGTGTTGA+TGG - chr3_4:57801371-57801390 None:intergenic 40.0%
AGAGAGAAGAAATGAAGCTC+CGG - chr3_4:57801488-57801507 None:intergenic 40.0%
AGCTTCATTTCTTCTCTCTG+CGG + chr3_4:57801489-57801508 Msa0509350:CDS 40.0%
TCTATCTTCTTCACTTCCTC+CGG - chr3_4:57801586-57801605 None:intergenic 40.0%
ATCGAGGATATACGATGCTA+CGG + chr3_4:57801621-57801640 Msa0509350:CDS 40.0%
! GAAAGAGAAAGGGAAAGTGT+GGG + chr3_4:57801669-57801688 Msa0509350:CDS 40.0%
!! AGCTTTTTCTGCTGATCTTC+AGG + chr3_4:57801837-57801856 Msa0509350:intron 40.0%
!! TGAACAGAGGCATTAAAGCT+TGG - chr3_4:57802114-57802133 None:intergenic 40.0%
AATGCCTCTGTTCATGTCAA+TGG + chr3_4:57802120-57802139 Msa0509350:intron 40.0%
!!! TTGGTTTTGAGCTTCTTTGG+AGG - chr3_4:57802178-57802197 None:intergenic 40.0%
!!! AGCTTGGTTTTGAGCTTCTT+TGG - chr3_4:57802181-57802200 None:intergenic 40.0%
!! TGAGAAAGAGTACCTGATAG+AGG - chr3_4:57802234-57802253 None:intergenic 40.0%
CAAGATCATCATCATCTCCA+AGG - chr3_4:57802272-57802291 None:intergenic 40.0%
AATTTCGCCTCGTTCAAAAG+TGG - chr3_4:57802580-57802599 None:intergenic 40.0%
TGCTAGGCAGAAGAGTAAAA+GGG - chr3_4:57802855-57802874 None:intergenic 40.0%
TTGCTAGGCAGAAGAGTAAA+AGG - chr3_4:57802856-57802875 None:intergenic 40.0%
!! TTGGTGTTGAAAAGCCTAGA+TGG - chr3_4:57802962-57802981 None:intergenic 40.0%
! AAGTGGACTCTCTAGAAGTT+TGG - chr3_4:57803021-57803040 None:intergenic 40.0%
ATAATGACTGGAGATTGTGC+AGG - chr3_4:57803044-57803063 None:intergenic 40.0%
TTGCTCAAACGATTCGTATC+TGG - chr3_4:57803203-57803222 None:intergenic 40.0%
CTCTATAAAAGAGGCAGAAC+AGG + chr3_4:57803355-57803374 Msa0509350:CDS 40.0%
CTGCTGCAAAAATTGCTTTG+AGG + chr3_4:57803378-57803397 Msa0509350:CDS 40.0%
AGGTTGTTTAGCAGAGCTTA+TGG + chr3_4:57803662-57803681 Msa0509350:intron 40.0%
GCGAACTTATTACTCAACTG+TGG + chr3_4:57804108-57804127 Msa0509350:CDS 40.0%
TTACTCAACTGTGGAAGTAG+AGG + chr3_4:57804117-57804136 Msa0509350:CDS 40.0%
TACTCAACTGTGGAAGTAGA+GGG + chr3_4:57804118-57804137 Msa0509350:CDS 40.0%
GTAGAGGGCTTGAAATTTCA+TGG + chr3_4:57804133-57804152 Msa0509350:CDS 40.0%
GGGCTTGAAATTTCATGGAA+AGG + chr3_4:57804138-57804157 Msa0509350:CDS 40.0%
GGCATCTAGATCCAAAAAAC+AGG + chr3_4:57804159-57804178 Msa0509350:CDS 40.0%
CACCAAATATGCCTGAAATC+TGG + chr3_4:57804336-57804355 Msa0509350:intron 40.0%
CTCCAGATTTCAGGCATATT+TGG - chr3_4:57804341-57804360 None:intergenic 40.0%
ACAATGACACTCCAGATTTC+AGG - chr3_4:57804350-57804369 None:intergenic 40.0%
ATATTATTGTCTTGCGCAGG+TGG + chr3_4:57804440-57804459 Msa0509350:intron 40.0%
ACAATCAACTCTTGAACCAG+AGG + chr3_4:57804514-57804533 Msa0509350:CDS 40.0%
TGCTTGTGTTTAACAACCTC+TGG - chr3_4:57804533-57804552 None:intergenic 40.0%
GGAAGTTCAGTATGTGAAAG+TGG - chr3_4:57804854-57804873 None:intergenic 40.0%
TTGGAGTCAGGAATTGTAGA+AGG - chr3_4:57804875-57804894 None:intergenic 40.0%
TACAATTCCTGACTCCAACA+TGG + chr3_4:57804877-57804896 Msa0509350:CDS 40.0%
GTTGTAAGTCATTGCCATGT+TGG - chr3_4:57804894-57804913 None:intergenic 40.0%
GTAATTACCTACTTTGCGAC+AGG + chr3_4:57804918-57804937 Msa0509350:CDS 40.0%
! TCCAGATTTTGTATTCCCTG+AGG + chr3_4:57804961-57804980 Msa0509350:intron 40.0%
TCCTCAGGGAATACAAAATC+TGG - chr3_4:57804965-57804984 None:intergenic 40.0%
CAAGTGACATAGGGTGTAAT+TGG - chr3_4:57805406-57805425 None:intergenic 40.0%
! GTTGCTGCTACTTATCTGTT+GGG + chr3_4:57805542-57805561 Msa0509350:intron 40.0%
ATAAACTTGACTGTCATGGC+AGG + chr3_4:57805618-57805637 Msa0509350:intron 40.0%
!!! CTTCTGAAATTTTCTGGTGG+TGG + chr3_4:57805822-57805841 Msa0509350:intron 40.0%
TGGGTTTAGACAGAGTTGTA+TGG + chr3_4:57806211-57806230 Msa0509350:intron 40.0%
TCATCTGTGTGACTTGATCT+AGG - chr3_4:57806304-57806323 None:intergenic 40.0%
!! AGGAATTAGTGGGCTAACAA+AGG + chr3_4:57806379-57806398 Msa0509350:CDS 40.0%
AAATTATATGCACCTCCAGC+CGG + chr3_4:57806410-57806429 Msa0509350:CDS 40.0%
CCAAAAGGAAACGACAGATT+CGG - chr3_4:57806494-57806513 None:intergenic 40.0%
AGATATGAGCTTGGACCAAA+AGG - chr3_4:57806509-57806528 None:intergenic 40.0%
TGTGCAGATAGATATGAGCT+TGG - chr3_4:57806518-57806537 None:intergenic 40.0%
AAGCTCATATCTATCTGCAC+AGG + chr3_4:57806517-57806536 Msa0509350:CDS 40.0%
!! GGTATGTTGATAGTTGTGAC+TGG + chr3_4:57806608-57806627 Msa0509350:CDS 40.0%
GTCAAAGCAATTTCTGCTAC+AGG - chr3_4:57806804-57806823 None:intergenic 40.0%
GTAGCAGAAATTGCTTTGAC+CGG + chr3_4:57806804-57806823 Msa0509350:CDS 40.0%
TAGCAGAAATTGCTTTGACC+GGG + chr3_4:57806805-57806824 Msa0509350:CDS 40.0%
AAGGGCTTAAATTTGGAAGG+GGG - chr3_4:57806947-57806966 None:intergenic 40.0%
!! AGGCACTGATACAAGATACA+TGG - chr3_4:57807025-57807044 None:intergenic 40.0%
! AGGGGGTATAATTGATCCAT+CGG + chr3_4:57807395-57807414 Msa0509350:intron 40.0%
TATAATTGATCCATCGGCAG+TGG + chr3_4:57807401-57807420 Msa0509350:intron 40.0%
AGGATGGTGTCTGCTATTAT+TGG + chr3_4:57807542-57807561 Msa0509350:intron 40.0%
TTGAAGATCCTGAAGCCAAA+AGG - chr3_4:57807588-57807607 None:intergenic 40.0%
TTGGCTTCAGGATCTTCAAA+AGG + chr3_4:57807589-57807608 Msa0509350:intron 40.0%
TGGCTTCAGGATCTTCAAAA+GGG + chr3_4:57807590-57807609 Msa0509350:intron 40.0%
AAGAAGTTCTGCAATACCTC+CGG - chr3_4:57807638-57807657 None:intergenic 40.0%
TTATTTCATCACTCTCGGTC+TGG + chr3_4:57807756-57807775 Msa0509350:intron 40.0%
!! GTCTGGTTCTTCTTGATACA+GGG + chr3_4:57807773-57807792 Msa0509350:intron 40.0%
TCTTCTTGATACAGGGTTTC+AGG + chr3_4:57807780-57807799 Msa0509350:intron 40.0%
CTTCTTGATACAGGGTTTCA+GGG + chr3_4:57807781-57807800 Msa0509350:intron 40.0%
!! GCTAGTCTTTGCAAGAACTT+GGG - chr3_4:57807824-57807843 None:intergenic 40.0%
!! TGCTAGTCTTTGCAAGAACT+TGG - chr3_4:57807825-57807844 None:intergenic 40.0%
!! AGGAATGATAAAGTTGGTGC+AGG - chr3_4:57807986-57808005 None:intergenic 40.0%
TTGACTCATCAGCATAGGAA+AGG - chr3_4:57808006-57808025 None:intergenic 40.0%
TTGAAATGCATTGTCAGGGA+TGG - chr3_4:57808071-57808090 None:intergenic 40.0%
TGCATTTCAAAAGAACCCAG+TGG + chr3_4:57808081-57808100 Msa0509350:CDS 40.0%
GCATTTCAAAAGAACCCAGT+GGG + chr3_4:57808082-57808101 Msa0509350:CDS 40.0%
CATTTCAAAAGAACCCAGTG+GGG + chr3_4:57808083-57808102 Msa0509350:CDS 40.0%
ATCTGCAAATCTCCGTTATC+AGG + chr3_4:57808321-57808340 Msa0509350:CDS 40.0%
! TGCCATTTCCTACAGAAACT+GGG - chr3_4:57808414-57808433 None:intergenic 40.0%
! ATGCCATTTCCTACAGAAAC+TGG - chr3_4:57808415-57808434 None:intergenic 40.0%
GTTTCTGTAGGAAATGGCAT+CGG + chr3_4:57808415-57808434 Msa0509350:intron 40.0%
! CATCGGCATTATCTAGTTCA+TGG + chr3_4:57808432-57808451 Msa0509350:intron 40.0%
TTCCAATTTAGGTCTGCAAC+TGG + chr3_4:57809096-57809115 Msa0509350:intron 40.0%
CACGGACAATCAATTCTTAC+TGG + chr3_4:57809244-57809263 Msa0509350:CDS 40.0%
CGGACAATCAATTCTTACTG+GGG + chr3_4:57809246-57809265 Msa0509350:CDS 40.0%
! CAATCGGCTTACTTAAGATG+AGG - chr3_4:57809348-57809367 None:intergenic 40.0%
TTGGAAGCTTCGCTAACAAA+AGG - chr3_4:57809419-57809438 None:intergenic 40.0%
! TGAAAATGTGTATGGTGGAG+TGG + chr3_4:57809460-57809479 Msa0509350:CDS 40.0%
! TGAAAATGTGTATGGTGGAG+TGG + chr3_4:57809460-57809479 Msa0509350:CDS 40.0%
CGTCCTAAGAGATCTTGTTA+TGG + chr3_4:57809656-57809675 Msa0509350:intron 40.0%
TAACAATTGCCTTAATGGCC+AGG + chr3_4:57809780-57809799 Msa0509350:intron 40.0%
TTCCCAACTTCAGGGAAATA+TGG + chr3_4:57810026-57810045 Msa0509350:intron 40.0%
GTCCATATTTCCCTGAAGTT+GGG - chr3_4:57810031-57810050 None:intergenic 40.0%
AGTCCATATTTCCCTGAAGT+TGG - chr3_4:57810032-57810051 None:intergenic 40.0%
TTGGTAAATTGCTGCAGCAA+TGG + chr3_4:57810372-57810391 Msa0509350:intron 40.0%
TTTGGAGAATCTGATGTAGG+TGG - chr3_4:57810452-57810471 None:intergenic 40.0%
GCTATCTTATGCAACTCTAC+CGG + chr3_4:57810479-57810498 Msa0509350:CDS 40.0%
TTTGGAGAATCTGATGAAGG+TGG - chr3_4:57810536-57810555 None:intergenic 40.0%
TACAACAAAAATGTCGCACG+GGG - chr3_4:57810632-57810651 None:intergenic 40.0%
GAGAAAGAAGCCTGAGCATT+GGG - chr3_4:57801214-57801233 None:intergenic 45.0%
!!! GGTGGAAGATGAGTTTTGGA+AGG - chr3_4:57801292-57801311 None:intergenic 45.0%
GAAAAACTCCGACAATTCCG+CGG + chr3_4:57801319-57801338 Msa0509350:CDS 45.0%
! TGTTGATGGAGAGGTTGACA+CGG - chr3_4:57801357-57801376 None:intergenic 45.0%
! TCTTAGCTGTGTTGATGGAG+AGG - chr3_4:57801366-57801385 None:intergenic 45.0%
AAGAAAACCGAACACCACGA+CGG + chr3_4:57801382-57801401 Msa0509350:CDS 45.0%
AGCGGAGGAGGAGAATATAA+AGG + chr3_4:57801525-57801544 Msa0509350:CDS 45.0%
AGCAACGATTGTTAAACCGG+AGG + chr3_4:57801567-57801586 Msa0509350:CDS 45.0%
GGAGGAAGTGAAGAAGATAG+AGG + chr3_4:57801585-57801604 Msa0509350:CDS 45.0%
GGAAGTGAAGAAGATAGAGG+AGG + chr3_4:57801588-57801607 Msa0509350:CDS 45.0%
AGGAGGAAGTGATAACATCG+AGG + chr3_4:57801605-57801624 Msa0509350:CDS 45.0%
ATATACGATGCTACGGCGAT+AGG + chr3_4:57801628-57801647 Msa0509350:CDS 45.0%
ATAGGTGAACCTTTGGCGAT+AGG + chr3_4:57801646-57801665 Msa0509350:CDS 45.0%
TAGGTGAACCTTTGGCGATA+GGG + chr3_4:57801647-57801666 Msa0509350:CDS 45.0%
TTCTCTTTCCCTATCGCCAA+AGG - chr3_4:57801658-57801677 None:intergenic 45.0%
TTGGCGATAGGGAAAGAGAA+AGG + chr3_4:57801658-57801677 Msa0509350:CDS 45.0%
TGGCGATAGGGAAAGAGAAA+GGG + chr3_4:57801659-57801678 Msa0509350:CDS 45.0%
GGAAAGAGAAAGGGAAAGTG+TGG + chr3_4:57801668-57801687 Msa0509350:CDS 45.0%
GACACCATTGACATGAACAG+AGG - chr3_4:57802127-57802146 None:intergenic 45.0%
GGAAAGCTTTCATAGCAGCT+TGG - chr3_4:57802197-57802216 None:intergenic 45.0%
TCTTCTGCCTAGCAATGACT+AGG + chr3_4:57802861-57802880 Msa0509350:intron 45.0%
TCCTTGTCCTAGTCATTGCT+AGG - chr3_4:57802871-57802890 None:intergenic 45.0%
GTGGTTCATGATGTCCATCT+AGG + chr3_4:57802945-57802964 Msa0509350:intron 45.0%
!! TAGCTTGCTAGGATAGCTTC+TGG + chr3_4:57803731-57803750 Msa0509350:intron 45.0%
GAAACAAACCTTCGGAGTTG+AGG - chr3_4:57804559-57804578 None:intergenic 45.0%
CATTGAACCTGTCGCAAAGT+AGG - chr3_4:57804928-57804947 None:intergenic 45.0%
TGCCTATCGATGAGGATAAG+TGG + chr3_4:57804996-57805015 Msa0509350:intron 45.0%
GCCTATCGATGAGGATAAGT+GGG + chr3_4:57804997-57805016 Msa0509350:intron 45.0%
ACCCACTTATCCTCATCGAT+AGG - chr3_4:57805001-57805020 None:intergenic 45.0%
CTCAAAGCGCAAGTGACATA+GGG - chr3_4:57805415-57805434 None:intergenic 45.0%
TCTCAAAGCGCAAGTGACAT+AGG - chr3_4:57805416-57805435 None:intergenic 45.0%
CAGATAAGTAGCAGCAACCA+AGG - chr3_4:57805540-57805559 None:intergenic 45.0%
! GGTTGCTGCTACTTATCTGT+TGG + chr3_4:57805541-57805560 Msa0509350:intron 45.0%
GAGTACCACAAGCAACAAGA+CGG - chr3_4:57805742-57805761 None:intergenic 45.0%
!! TTTCTGGTGGTGGGTTAATC+AGG + chr3_4:57805832-57805851 Msa0509350:intron 45.0%
TTGTAACTAACTTCACGCCG+AGG + chr3_4:57806254-57806273 Msa0509350:intron 45.0%
GAATCAAGCTTGATCCTCCT+CGG - chr3_4:57806274-57806293 None:intergenic 45.0%
ACAGATCTTAAGGACTGTCC+AGG + chr3_4:57806352-57806371 Msa0509350:intron 45.0%
TCCAGGCAGAAGGAATTAGT+GGG + chr3_4:57806369-57806388 Msa0509350:CDS 45.0%
!! CCGAATCTGTCGTTTCCTTT+TGG + chr3_4:57806491-57806510 Msa0509350:CDS 45.0%
CACAACTATCAACATACCGG+TGG - chr3_4:57806606-57806625 None:intergenic 45.0%
! CTCTAGCTCCATATGTGACA+TGG - chr3_4:57806640-57806659 None:intergenic 45.0%
CATGTCACATATGGAGCTAG+AGG + chr3_4:57806638-57806657 Msa0509350:CDS 45.0%
ACATATGGAGCTAGAGGAAC+TGG + chr3_4:57806644-57806663 Msa0509350:CDS 45.0%
CATATGGAGCTAGAGGAACT+GGG + chr3_4:57806645-57806664 Msa0509350:CDS 45.0%
ATATGGAGCTAGAGGAACTG+GGG + chr3_4:57806646-57806665 Msa0509350:CDS 45.0%
GGCGAATGAACTGTCTTTCT+GGG - chr3_4:57806730-57806749 None:intergenic 45.0%
GAAATGGCCAACTAACCTGT+GGG - chr3_4:57806880-57806899 None:intergenic 45.0%
! GGGCAATGAGAGCACATAAA+GGG - chr3_4:57806965-57806984 None:intergenic 45.0%
! TGGGCAATGAGAGCACATAA+AGG - chr3_4:57806966-57806985 None:intergenic 45.0%
! TGTGCTCTCATTGCCCATTT+TGG + chr3_4:57806969-57806988 Msa0509350:intron 45.0%
AATCTTCACGACAGCAGGTT+GGG - chr3_4:57807158-57807177 None:intergenic 45.0%
AAATCTTCACGACAGCAGGT+TGG - chr3_4:57807159-57807178 None:intergenic 45.0%
GTACAAATCTTCACGACAGC+AGG - chr3_4:57807163-57807182 None:intergenic 45.0%
AAACTAGTTACCACTGCCGA+TGG - chr3_4:57807414-57807433 None:intergenic 45.0%
TCTTGGTTTAGTATCACCGG+AGG + chr3_4:57807619-57807638 Msa0509350:CDS 45.0%
!! TGAGTGAGTTCTGAAAGCAG+AGG - chr3_4:57807677-57807696 None:intergenic 45.0%
!! GGTCTGGTTCTTCTTGATAC+AGG + chr3_4:57807772-57807791 Msa0509350:intron 45.0%
GGGTTTCAGGGAAAGATTGT+TGG + chr3_4:57807793-57807812 Msa0509350:intron 45.0%
GTTATTACGGACACTGTCAG+AGG + chr3_4:57807929-57807948 Msa0509350:CDS 45.0%
! CGCAATTGACTCATCAGCAT+AGG - chr3_4:57808011-57808030 None:intergenic 45.0%
GATTCCAATTTGTCCCCACT+GGG - chr3_4:57808099-57808118 None:intergenic 45.0%
AGATTCCAATTTGTCCCCAC+TGG - chr3_4:57808100-57808119 None:intergenic 45.0%
! TTTGGTGGTCTAAAACTCGC+TGG + chr3_4:57808145-57808164 Msa0509350:CDS 45.0%
! TTGGTGGTCTAAAACTCGCT+GGG + chr3_4:57808146-57808165 Msa0509350:CDS 45.0%
AGATTGGACCCAGTTTCTGT+AGG + chr3_4:57808403-57808422 Msa0509350:intron 45.0%
GACCCAGTTTCTGTAGGAAA+TGG + chr3_4:57808409-57808428 Msa0509350:intron 45.0%
TCTTAGGACGCTCTTAGACA+AGG - chr3_4:57809646-57809665 None:intergenic 45.0%
AATTGCCTTAATGGCCAGGT+TGG + chr3_4:57809784-57809803 Msa0509350:intron 45.0%
AAATGCCAACCTGGCCATTA+AGG - chr3_4:57809792-57809811 None:intergenic 45.0%
! GCCAGGTTGGCATTTATCTT+CGG + chr3_4:57809797-57809816 Msa0509350:intron 45.0%
ACCGAAGATAAATGCCAACC+TGG - chr3_4:57809801-57809820 None:intergenic 45.0%
! GGTCTTTCTAACTTGCAGTC+CGG - chr3_4:57810417-57810436 None:intergenic 45.0%
! GGTCTTTGTAACTTGCAGTC+CGG - chr3_4:57810501-57810520 None:intergenic 45.0%
GAGCTGGTAAATAGGCACAA+AGG + chr3_4:57810673-57810692 Msa0509350:three_prime_UTR 45.0%
GGAGAAAGAAGCCTGAGCAT+TGG - chr3_4:57801215-57801234 None:intergenic 50.0%
TGAAAGTAAGTCACGTGCGG+CGG - chr3_4:57801244-57801263 None:intergenic 50.0%
CGGTGAAAGTAAGTCACGTG+CGG - chr3_4:57801247-57801266 None:intergenic 50.0%
! TGTCGGAGTTTTTCGTTCGG+CGG - chr3_4:57801313-57801332 None:intergenic 50.0%
! GTTGTTTCCGTCGTGGTGTT+CGG - chr3_4:57801392-57801411 None:intergenic 50.0%
GAACACCACGACGGAAACAA+CGG + chr3_4:57801391-57801410 Msa0509350:CDS 50.0%
GTTCTTCAGCACGAAGCAAC+CGG + chr3_4:57801431-57801450 Msa0509350:CDS 50.0%
GAGAAGAAATGAAGCTCCGG+CGG - chr3_4:57801485-57801504 None:intergenic 50.0%
TACGGCGATAGGTGAACCTT+TGG + chr3_4:57801639-57801658 Msa0509350:CDS 50.0%
AGGGGAAGCTGAACAAGTTC+CGG + chr3_4:57801723-57801742 Msa0509350:CDS 50.0%
GCCTAGCAATGACTAGGACA+AGG + chr3_4:57802867-57802886 Msa0509350:intron 50.0%
ACTGGAGATTGTGCAGGAAG+TGG - chr3_4:57803038-57803057 None:intergenic 50.0%
AAGCAGATCCTCAACTCCGA+AGG + chr3_4:57804548-57804567 Msa0509350:CDS 50.0%
GTCATTGCCATGTTGGAGTC+AGG - chr3_4:57804887-57804906 None:intergenic 50.0%
GCAGAACTGTGATGTCCTCA+GGG - chr3_4:57804979-57804998 None:intergenic 50.0%
CACAGTTCTGCCTATCGATG+AGG + chr3_4:57804988-57805007 Msa0509350:intron 50.0%
!! TAAGTGGGTTGCAGCATGCT+TGG + chr3_4:57805012-57805031 Msa0509350:intron 50.0%
ACTTGACTGTCATGGCAGGA+TGG + chr3_4:57805622-57805641 Msa0509350:intron 50.0%
TCATACTCCTGCCATCGTTC+AGG - chr3_4:57805686-57805705 None:intergenic 50.0%
! GGAATCCGTCTTGTTGCTTG+TGG + chr3_4:57805734-57805753 Msa0509350:CDS 50.0%
TGCTTGTGGTACTCCACTGA+AGG + chr3_4:57805748-57805767 Msa0509350:CDS 50.0%
TAACTAACTTCACGCCGAGG+AGG + chr3_4:57806257-57806276 Msa0509350:intron 50.0%
TTAAGGACTGTCCAGGCAGA+AGG + chr3_4:57806359-57806378 Msa0509350:CDS 50.0%
GTCCAGGCAGAAGGAATTAG+TGG + chr3_4:57806368-57806387 Msa0509350:CDS 50.0%
GCCTGATATGAAGCCTGAAC+CGG - chr3_4:57806432-57806451 None:intergenic 50.0%
TCTATCTGCACAGGCTAGAG+TGG + chr3_4:57806526-57806545 Msa0509350:CDS 50.0%
GGTGCAAGCCATGTCACATA+TGG + chr3_4:57806629-57806648 Msa0509350:CDS 50.0%
CGGCGAATGAACTGTCTTTC+TGG - chr3_4:57806731-57806750 None:intergenic 50.0%
AAGACAGTTCATTCGCCGTG+AGG + chr3_4:57806733-57806752 Msa0509350:CDS 50.0%
AGACAGTTCATTCGCCGTGA+GGG + chr3_4:57806734-57806753 Msa0509350:CDS 50.0%
CAACAGGAACTTCTCCCTCA+CGG - chr3_4:57806751-57806770 None:intergenic 50.0%
ATTTCTGCTACAGGGTCTGG+CGG - chr3_4:57806795-57806814 None:intergenic 50.0%
GCAATTTCTGCTACAGGGTC+TGG - chr3_4:57806798-57806817 None:intergenic 50.0%
! TTGACCGGGTTGAGATTGCT+CGG + chr3_4:57806819-57806838 Msa0509350:CDS 50.0%
TAACCCGAGCAATCTCAACC+CGG - chr3_4:57806826-57806845 None:intergenic 50.0%
CTCGGGTTATGAATGCTGCT+GGG + chr3_4:57806837-57806856 Msa0509350:CDS 50.0%
CGAAATGGCCAACTAACCTG+TGG - chr3_4:57806881-57806900 None:intergenic 50.0%
GCAGACACCATCCTGTCTAA+AGG - chr3_4:57807536-57807555 None:intergenic 50.0%
AGAACTCACTCACCGTTTCC+AGG + chr3_4:57807685-57807704 Msa0509350:CDS 50.0%
AGAACCCAGTGGGGACAAAT+TGG + chr3_4:57808092-57808111 Msa0509350:CDS 50.0%
! TGGTGGTCTAAAACTCGCTG+GGG + chr3_4:57808147-57808166 Msa0509350:CDS 50.0%
GGCCAGTTGCAGACCTAAAT+TGG - chr3_4:57809101-57809120 None:intergenic 50.0%
GCAGATAATTGCTGGGGTTG+TGG + chr3_4:57809158-57809177 Msa0509350:intron 50.0%
CAATTCTTACTGGGGAACGC+AGG + chr3_4:57809254-57809273 Msa0509350:CDS 50.0%
ATTGACCTTGCACGCTCTAC+CGG + chr3_4:57810395-57810414 Msa0509350:CDS 50.0%
GAATCTGATGTAGGTGGCTC+AGG - chr3_4:57810446-57810465 None:intergenic 50.0%
GAATCTGATGAAGGTGGCTC+AGG - chr3_4:57810530-57810549 None:intergenic 50.0%
GCTCAGGCTTCTTTCTCCAC+AGG + chr3_4:57801217-57801236 Msa0509350:CDS 55.0%
GAAAGTAAGTCACGTGCGGC+GGG - chr3_4:57801243-57801262 None:intergenic 55.0%
! CGGCGGTGGAAGATGAGTTT+TGG - chr3_4:57801296-57801315 None:intergenic 55.0%
TGATGGAGAGGTTGACACGG+CGG - chr3_4:57801354-57801373 None:intergenic 55.0%
GGCAGAACTGTGATGTCCTC+AGG - chr3_4:57804980-57804999 None:intergenic 55.0%
GACTGTCATGGCAGGATGGA+TGG + chr3_4:57805626-57805645 Msa0509350:intron 55.0%
TACTCCTGCCATCGTTCAGG+CGG - chr3_4:57805683-57805702 None:intergenic 55.0%
GCCCACTAATTCCTTCTGCC+TGG - chr3_4:57806373-57806392 None:intergenic 55.0%
GATATGAAGCCTGAACCGGC+TGG - chr3_4:57806428-57806447 None:intergenic 55.0%
! GCCGGTTCAGGCTTCATATC+AGG + chr3_4:57806428-57806447 Msa0509350:CDS 55.0%
! TGACCGGGTTGAGATTGCTC+GGG + chr3_4:57806820-57806839 Msa0509350:CDS 55.0%
GCTCGGGTTATGAATGCTGC+TGG + chr3_4:57806836-57806855 Msa0509350:CDS 55.0%
TGAATGCTGCTGGGCAGAGA+CGG + chr3_4:57806846-57806865 Msa0509350:CDS 55.0%
ATGCCCTCCCACAGGTTAGT+TGG + chr3_4:57806870-57806889 Msa0509350:intron 55.0%
TGGCCAACTAACCTGTGGGA+GGG - chr3_4:57806876-57806895 None:intergenic 55.0%
ATGGCCAACTAACCTGTGGG+AGG - chr3_4:57806877-57806896 None:intergenic 55.0%
! GGTCTAAAACTCGCTGGGGT+TGG + chr3_4:57808151-57808170 Msa0509350:CDS 55.0%
TTGCTGGGGTTGTGGAGCAT+CGG + chr3_4:57809166-57809185 Msa0509350:CDS 55.0%
TGTAGGTGGCTCAGGTGACT+CGG - chr3_4:57810438-57810457 None:intergenic 55.0%
TGAAGGTGGCTCAGGTGACT+CGG - chr3_4:57810522-57810541 None:intergenic 55.0%
! GGAAGGTACGGCACGTGAGA+CGG - chr3_4:57801275-57801294 None:intergenic 60.0%
! CGGAGTTTTTCGTTCGGCGG+TGG - chr3_4:57801310-57801329 None:intergenic 60.0%
GTTTGGCGCCGCGGAATTGT+CGG - chr3_4:57801330-57801349 None:intergenic 60.0%
!! CAACCGGCGAGGAGTGTTGA+TGG + chr3_4:57801447-57801466 Msa0509350:CDS 60.0%
GAAGCTCCGGCGGCTAGAAA+CGG - chr3_4:57801475-57801494 None:intergenic 60.0%
TTCTCTCTGCGGCGACGACA+AGG + chr3_4:57801500-57801519 Msa0509350:CDS 60.0%
TCTCTCTGCGGCGACGACAA+GGG + chr3_4:57801501-57801520 Msa0509350:CDS 60.0%
! TATGCACCTCCAGCCGGTTC+AGG + chr3_4:57806416-57806435 Msa0509350:CDS 60.0%
ATGAAGCCTGAACCGGCTGG+AGG - chr3_4:57806425-57806444 None:intergenic 60.0%
ATGCTTGATGGAGGGGCCAC+CGG + chr3_4:57806587-57806606 Msa0509350:CDS 60.0%
GAATGCTGCTGGGCAGAGAC+GGG + chr3_4:57806847-57806866 Msa0509350:CDS 60.0%
CGGCACGTGAGACGGTTACG+CGG - chr3_4:57801267-57801286 None:intergenic 65.0%
GAGGTTGACACGGCGGCGTT+TGG - chr3_4:57801347-57801366 None:intergenic 65.0%
! CGACGCCGTTGTTTCCGTCG+TGG - chr3_4:57801399-57801418 None:intergenic 65.0%
TCAGCACGAAGCAACCGGCG+AGG + chr3_4:57801436-57801455 Msa0509350:CDS 65.0%
GCGCCATCAACACTCCTCGC+CGG - chr3_4:57801453-57801472 None:intergenic 65.0%
!! ATGGCGCCGTTTCTAGCCGC+CGG + chr3_4:57801466-57801485 Msa0509350:CDS 65.0%
! CGCATTGGCCGCCTGAACGA+TGG + chr3_4:57805672-57805691 Msa0509350:CDS 65.0%
TTGGCCGCCTGAACGATGGC+AGG + chr3_4:57805676-57805695 Msa0509350:CDS 65.0%
GCAGTCCGGTAGAGCGTGCA+AGG - chr3_4:57810403-57810422 None:intergenic 65.0%
TGCGGCGACGACAAGGGCAG+CGG + chr3_4:57801507-57801526 Msa0509350:CDS 70.0%
GACGACAAGGGCAGCGGAGG+AGG + chr3_4:57801513-57801532 Msa0509350:CDS 70.0%
GAGACGGGATGCCCTCCCAC+AGG + chr3_4:57806862-57806881 Msa0509350:CDS 70.0%
AGTCACGTGCGGCGGGCCTG+TGG - chr3_4:57801236-57801255 None:intergenic 75.0%
GGCGACGACAAGGGCAGCGG+AGG + chr3_4:57801510-57801529 Msa0509350:CDS 75.0%
! CACGGCGGCGTTTGGCGCCG+CGG - chr3_4:57801339-57801358 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 57801205 57810814 57801205 ID=Msa0509350;Name=Msa0509350
chr3_4 mRNA 57801205 57810814 57801205 ID=Msa0509350-mRNA-1;Parent=Msa0509350;Name=Msa0509350-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.30|0.35|0.92|1|0.92|14|195|1131
chr3_4 exon 57801205 57801817 57801205 ID=Msa0509350-mRNA-1:exon:13263;Parent=Msa0509350-mRNA-1
chr3_4 exon 57802184 57802240 57802184 ID=Msa0509350-mRNA-1:exon:13264;Parent=Msa0509350-mRNA-1
chr3_4 exon 57802967 57803068 57802967 ID=Msa0509350-mRNA-1:exon:13265;Parent=Msa0509350-mRNA-1
chr3_4 exon 57803204 57803433 57803204 ID=Msa0509350-mRNA-1:exon:13266;Parent=Msa0509350-mRNA-1
chr3_4 exon 57804007 57804226 57804007 ID=Msa0509350-mRNA-1:exon:13267;Parent=Msa0509350-mRNA-1
chr3_4 exon 57804459 57804569 57804459 ID=Msa0509350-mRNA-1:exon:13268;Parent=Msa0509350-mRNA-1
chr3_4 exon 57804711 57804939 57804711 ID=Msa0509350-mRNA-1:exon:13269;Parent=Msa0509350-mRNA-1
chr3_4 exon 57805640 57805769 57805640 ID=Msa0509350-mRNA-1:exon:13270;Parent=Msa0509350-mRNA-1
chr3_4 exon 57806356 57806883 57806356 ID=Msa0509350-mRNA-1:exon:13271;Parent=Msa0509350-mRNA-1
chr3_4 exon 57807599 57807706 57807599 ID=Msa0509350-mRNA-1:exon:13272;Parent=Msa0509350-mRNA-1
chr3_4 exon 57807794 57808342 57807794 ID=Msa0509350-mRNA-1:exon:13273;Parent=Msa0509350-mRNA-1
chr3_4 exon 57809162 57809355 57809162 ID=Msa0509350-mRNA-1:exon:13274;Parent=Msa0509350-mRNA-1
chr3_4 exon 57809427 57809520 57809427 ID=Msa0509350-mRNA-1:exon:13275;Parent=Msa0509350-mRNA-1
chr3_4 exon 57810389 57810814 57810389 ID=Msa0509350-mRNA-1:exon:13276;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57801205 57801817 57801205 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57802184 57802240 57802184 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57802967 57803068 57802967 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57803204 57803433 57803204 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57804007 57804226 57804007 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57804459 57804569 57804459 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57804711 57804939 57804711 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57805640 57805769 57805640 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57806356 57806883 57806356 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57807599 57807706 57807599 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57807794 57808342 57807794 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57809162 57809355 57809162 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57809427 57809520 57809427 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 CDS 57810389 57810619 57810389 ID=Msa0509350-mRNA-1:cds;Parent=Msa0509350-mRNA-1
chr3_4 three_prime_UTR 57810620 57810814 57810620 ID=Msa0509350-mRNA-1:three_prime_utr;Parent=Msa0509350-mRNA-1
Gene Sequence

>Msa0509350

ATGAAGCCCAATGCTCAGGCTTCTTTCTCCACAGGCCCGCCGCACGTGACTTACTTTCACCGCGTAACCGTCTCACGTGCCGTACCTTCCAAAACTCATCTTCCACCGCCGAACGAAAAACTCCGACAATTCCGCGGCGCCAAACGCCGCCGTGTCAACCTCTCCATCAACACAGCTAAGAAAACCGAACACCACGACGGAAACAACGGCGTCGAGCGAACAGAATGTTCTTCAGCACGAAGCAACCGGCGAGGAGTGTTGATGGCGCCGTTTCTAGCCGCCGGAGCTTCATTTCTTCTCTCTGCGGCGACGACAAGGGCAGCGGAGGAGGAGAATATAAAGGAGAATACGGCGCCAGTTGAAGCAACGATTGTTAAACCGGAGGAAGTGAAGAAGATAGAGGAGGAAGTGATAACATCGAGGATATACGATGCTACGGCGATAGGTGAACCTTTGGCGATAGGGAAAGAGAAAGGGAAAGTGTGGGAGAAGTTGATGAATGCTAGAGTTGTTTATTTAGGGGAAGCTGAACAAGTTCCGGTTCGAGATGATAAAGAATTGGAGCTTGAGATTGTTAAGAATTTGCATAAGCGTTGTGTTGATGTTGATAAGCAAGCTCAAAACCAAGCTGCTATGAAAGCTTTCCGCAACTTTACTTCTCCTCTATCAGGCTTTTCAACACCAACAGATGAATATGGTTCAAAAGAGAAAATTGAAGCTACCAAACTTCTAGAGAGTCCACTTCCTGCACAATCTCCAGTCATTATAACGGATACGAATCGTTTGAGCAAAAAACATCTGCAAAACTATGCTCGAAAGAACAATCTTGATCCACCTGTTTTTACAATCAAAACTGAGAGGCTTCACTATAAAGCTACTGTTGTTATTGATGAGAAATCATTTGAAAGCCCTACATTTTGCAACTCTATAAAAGAGGCAGAACAGGCTGCTGCAAAAATTGCTTTGAGGGAATTGCCGATTTCAGTTGACTTGTTTAAGAAGGATGAATCTTGTCCGTCCAAGAGTTTACTACTAGAATTAACACAGAGAGAAGGTTATTCCAAACCAACATATACAACTATAGAGTCTGGTTCTCTTCATATGCGAACTTATTACTCAACTGTGGAAGTAGAGGGCTTGAAATTTCATGGAAAGGCATCTAGATCCAAAAAACAGGCAGATATTGATGCTGCAAAGATTGCTTACATTGCCTTAAAAGAGTGTGGAATTGAAATGTATGCGGCTTTTTCTTCCTCTAACAAAGAAAATCAAGCAGTACAATCAACTCTTGAACCAGAGGTTGTTAAACACAAGCAGATCCTCAACTCCGAAGATAAACGTTTGGATCAGGAGAAATTACCTACTGATGATGTCAAAGTTAACAATGACATGCACTGTGAATCTTTACCAATTCCCCCTAACAAAAAAATGAAGATGACCAACATGAGCTCTTCATCTTTACCCAAATCATCTCCACTTTCACATACTGAACTTCCTTCTACAATTCCTGACTCCAACATGGCAATGACTTACAACACAAGTAATTACCTACTTTGCGACAGGATGGATGGAGAAACCTTGAAGTCTTATACAACGCATTGGCCGCCTGAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGTCGTGAAAACGGAATCCGTCTTGTTGCTTGTGGTACTCCACTGAAGATCTTAAGGACTGTCCAGGCAGAAGGAATTAGTGGGCTAACAAAGGCTGAACGTAAATTATATGCACCTCCAGCCGGTTCAGGCTTCATATCAGGCTTTTCTTCTATGTCACGTAGATATTCAGCTGACAGTACTCCGAATCTGTCGTTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTGGTTGACGAGTATACTATGTCCCAGACCATCTTACAAAATATGCTTGATGGAGGGGCCACCGGTATGTTGATAGTTGTGACTGGTGCAAGCCATGTCACATATGGAGCTAGAGGAACTGGGGTGCCTGCAAGAATATCAAGAAAATTACAAAAGAAAAATCAAGTAGTTATATTACTTGACCCAGAAAGACAGTTCATTCGCCGTGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCCGCCAGACCCTGTAGCAGAAATTGCTTTGACCGGGTTGAGATTGCTCGGGTTATGAATGCTGCTGGGCAGAGACGGGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCGGAGGTATTGCAGAACTTCTTTGATCTAGAGAAATATCCTCTGCTTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAGTTCTTGCAAAGACTAGCAATAGAAGAAGGAATATCAGTAACAACTACATTATTAGCACAGTATCAGAAGCGGAAAGAAAACTTCTTTCAAGAGCTTGACTATGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTATCATTCCTTTCCTATGCTGATGAGTCAATTGCGCCTGATAACATTAGTTCTCTAATAGGACTTCTTGGCTCCATCCCTGACAATGCATTTCAAAAGAACCCAGTGGGGACAAATTGGAATCTCAATCATCGAATTGCATCAGTTGTATTTGGTGGTCTAAAACTCGCTGGGGTTGGATTTATTTCAAGTATTGGAGCTGTTGCTTCATCAAATTCTCTGTTTGCAGTTCGTAAGTTTCTTAATCCAGCAATCATCACTAACAAACAGATTGCAAGGTCACCAATACTCAAAACAGCAGTTGTTTATGCACTTTTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGGTTGTGGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTATCACGGACAATCAATTCTTACTGGGGAACGCAGGTAAGATACACTTTCTTATACTATCTTGTATATGCTTTTGATCATTTTCAAAATTCTGAGTGTTCATCACCTCATCTTAACGAAGCTTCCAATTTCACAATCAAGCGTTCATATGAAAATGTGTATGGTGGAGTGGTAATCAAGCGTTCATATGAAAATGTGTATGGTGGAGTGCAATGGATTGACCTTGCACGCTCTACCGGACTGCAAGTTAGAAAGACCGAGTCACCTGAGCCACCTACATCAGATTCTCCAAATCAAGCTGCTATCTTATGCAACTCTACCGGACTGCAAGTTACAAAGACCGAGTCACCTGAGCCACCTTCATCAGATTCTCCAAATCAAGCTGCAATCTTATGCAACGAAGCAGAAGAAGCCAGCATCGATGAGATTAAAAGTGAATGA
Protein sequence

>Msa0509350

MKPNAQASFSTGPPHVTYFHRVTVSRAVPSKTHLPPPNEKLRQFRGAKRRRVNLSINTAKKTEHHDGNNGVERTECSSARSNRRGVLMAPFLAAGASFLLSAATTRAAEEENIKENTAPVEATIVKPEEVKKIEEEVITSRIYDATAIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCVDVDKQAQNQAAMKAFRNFTSPLSGFSTPTDEYGSKEKIEATKLLESPLPAQSPVIITDTNRLSKKHLQNYARKNNLDPPVFTIKTERLHYKATVVIDEKSFESPTFCNSIKEAEQAAAKIALRELPISVDLFKKDESCPSKSLLLELTQREGYSKPTYTTIESGSLHMRTYYSTVEVEGLKFHGKASRSKKQADIDAAKIAYIALKECGIEMYAAFSSSNKENQAVQSTLEPEVVKHKQILNSEDKRLDQEKLPTDDVKVNNDMHCESLPIPPNKKMKMTNMSSSSLPKSSPLSHTELPSTIPDSNMAMTYNTSNYLLCDRMDGETLKSYTTHWPPERWQEYEPILSYCRENGIRLVACGTPLKILRTVQAEGISGLTKAERKLYAPPAGSGFISGFSSMSRRYSADSTPNLSFPFGPSSYLSAQARVVDEYTMSQTILQNMLDGGATGMLIVVTGASHVTYGARGTGVPARISRKLQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELTHRFQGFRERLLADPKFLQRLAIEEGISVTTTLLAQYQKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADESIAPDNISSLIGLLGSIPDNAFQKNPVGTNWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLFAVRKFLNPAIITNKQIARSPILKTAVVYALFLGISANLRYQIIAGVVEHRISDQFASQTFLVNMLSFVSRTINSYWGTQVRYTFLYYLVYAFDHFQNSECSSPHLNEASNFTIKRSYENVYGGVVIKRSYENVYGGVQWIDLARSTGLQVRKTESPEPPTSDSPNQAAILCNSTGLQVTKTESPEPPSSDSPNQAAILCNEAEEASIDEIKSE*