Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705870 | XP_039685262.1 | 100.000 | 363 | 0 | 0 | 1 | 363 | 1 | 363 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705870 | sp|Q65XS5|BC10_ORYSJ | 76.623 | 308 | 69 | 2 | 56 | 360 | 85 | 392 | 1.09e-175 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705870 | A0A396GRJ7 | 100.000 | 363 | 0 | 0 | 1 | 363 | 1 | 363 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001590 | Msa0705870 | 0.959087 | 4.672276e-117 | -8.615850e-47 |
| Msa0003700 | Msa0705870 | 0.803800 | 2.933076e-49 | -8.615850e-47 |
| Msa0017510 | Msa0705870 | 0.836230 | 1.056872e-56 | -8.615850e-47 |
| Msa0032370 | Msa0705870 | 0.800885 | 1.168207e-48 | -8.615850e-47 |
| Msa0040450 | Msa0705870 | 0.844453 | 7.488766e-59 | -8.615850e-47 |
| Msa0044020 | Msa0705870 | 0.805179 | 1.512531e-49 | -8.615850e-47 |
| Msa0046100 | Msa0705870 | 0.821945 | 3.082092e-53 | -8.615850e-47 |
| Msa0069330 | Msa0705870 | 0.807149 | 5.821071e-50 | -8.615850e-47 |
| Msa0093400 | Msa0705870 | 0.807002 | 6.251438e-50 | -8.615850e-47 |
| Msa0101700 | Msa0705870 | 0.803300 | 3.723945e-49 | -8.615850e-47 |
| Msa0104550 | Msa0705870 | 0.800282 | 1.550209e-48 | -8.615850e-47 |
| Msa0110970 | Msa0705870 | 0.845738 | 3.366724e-59 | -8.615850e-47 |
| Msa0620240 | Msa0705870 | 0.806868 | 6.674173e-50 | -8.615850e-47 |
| Msa0633700 | Msa0705870 | 0.817410 | 3.345614e-52 | -8.615850e-47 |
| Msa0655560 | Msa0705870 | 0.805503 | 1.293511e-49 | -8.615850e-47 |
| Msa0657750 | Msa0705870 | 0.817524 | 3.152950e-52 | -8.615850e-47 |
| Msa0658570 | Msa0705870 | 0.803762 | 2.986545e-49 | -8.615850e-47 |
| Msa0682620 | Msa0705870 | 0.820217 | 7.707777e-53 | -8.615850e-47 |
| Msa0688770 | Msa0705870 | 0.826435 | 2.717511e-54 | -8.615850e-47 |
| Msa0690520 | Msa0705870 | 0.804412 | 2.186885e-49 | -8.615850e-47 |
| Msa0692230 | Msa0705870 | 0.800062 | 1.719215e-48 | -8.615850e-47 |
| Msa0693380 | Msa0705870 | 0.807119 | 5.906407e-50 | -8.615850e-47 |
| Msa0703230 | Msa0705870 | 0.804764 | 1.846575e-49 | -8.615850e-47 |
| Msa0705870 | Msa0708520 | 0.810187 | 1.305950e-50 | -8.615850e-47 |
| Msa0705870 | Msa0760380 | 0.824786 | 6.684623e-54 | -8.615850e-47 |
| Msa0705870 | Msa0762210 | 0.804628 | 1.971610e-49 | -8.615850e-47 |
| Msa0705870 | Msa0764570 | 0.806876 | 6.646862e-50 | -8.615850e-47 |
| Msa0705870 | Msa0812990 | 0.804822 | 1.796095e-49 | -8.615850e-47 |
| Msa0705870 | Msa0824660 | 0.803873 | 2.831348e-49 | -8.615850e-47 |
| Msa0705870 | Msa0824680 | 0.807972 | 3.892270e-50 | -8.615850e-47 |
| Msa0705870 | Msa0828920 | 0.811339 | 7.355144e-51 | -8.615850e-47 |
| Msa0705870 | Msa0844240 | 0.802173 | 6.361382e-49 | -8.615850e-47 |
| Msa0705870 | Msa0850960 | 0.822357 | 2.474132e-53 | -8.615850e-47 |
| Msa0705870 | Msa0878290 | 0.811293 | 7.525334e-51 | -8.615850e-47 |
| Msa0705870 | Msa0880140 | 0.833507 | 5.125774e-56 | -8.615850e-47 |
| Msa0705870 | Msa0880440 | 0.807030 | 6.168107e-50 | -8.615850e-47 |
| Msa0705870 | Msa0896750 | 0.813454 | 2.538425e-51 | -8.615850e-47 |
| Msa0705870 | Msa0909120 | 0.800901 | 1.159492e-48 | -8.615850e-47 |
| Msa0705870 | Msa0923330 | 0.804697 | 1.907694e-49 | -8.615850e-47 |
| Msa0705870 | Msa0931720 | 0.805272 | 1.445872e-49 | -8.615850e-47 |
| Msa0705870 | Msa0954550 | 0.806997 | 6.268219e-50 | -8.615850e-47 |
| Msa0705870 | Msa0959360 | 0.800012 | 1.759339e-48 | -8.615850e-47 |
| Msa0705870 | Msa0970570 | -0.812560 | 3.987152e-51 | -8.615850e-47 |
| Msa0705870 | Msa1023400 | 0.827142 | 1.841884e-54 | -8.615850e-47 |
| Msa0705870 | Msa1031930 | 0.800760 | 1.239058e-48 | -8.615850e-47 |
| Msa0705870 | Msa1043920 | 0.812473 | 4.164702e-51 | -8.615850e-47 |
| Msa0705870 | Msa1063950 | 0.807444 | 5.040376e-50 | -8.615850e-47 |
| Msa0705870 | Msa1082500 | 0.806194 | 9.258109e-50 | -8.615850e-47 |
| Msa0705870 | Msa1085200 | 0.827222 | 1.762818e-54 | -8.615850e-47 |
| Msa0705870 | Msa1108160 | 0.800855 | 1.184933e-48 | -8.615850e-47 |
| Msa0705870 | Msa1111110 | 0.814392 | 1.576967e-51 | -8.615850e-47 |
| Msa0705870 | Msa1116130 | -0.808639 | 2.805698e-50 | -8.615850e-47 |
| Msa0705870 | Msa1133000 | 0.805468 | 1.315634e-49 | -8.615850e-47 |
| Msa0705870 | Msa1151910 | 0.847559 | 1.070906e-59 | -8.615850e-47 |
| Msa0705870 | Msa1162550 | -0.801175 | 1.019020e-48 | -8.615850e-47 |
| Msa0705870 | Msa1168160 | 0.813417 | 2.586865e-51 | -8.615850e-47 |
| Msa0705870 | Msa1179940 | 0.815328 | 9.780397e-52 | -8.615850e-47 |
| Msa0705870 | Msa1179970 | 0.812734 | 3.652232e-51 | -8.615850e-47 |
| Msa0705870 | Msa1200020 | 0.800468 | 1.421297e-48 | -8.615850e-47 |
| Msa0705870 | Msa1211150 | -0.831248 | 1.858769e-55 | -8.615850e-47 |
| Msa0705870 | Msa1222970 | 0.812591 | 3.924461e-51 | -8.615850e-47 |
| Msa0705870 | Msa1236100 | 0.821887 | 3.178782e-53 | -8.615850e-47 |
| Msa0705870 | Msa1242220 | 0.800445 | 1.436205e-48 | -8.615850e-47 |
| Msa0705870 | Msa1242240 | 0.813044 | 3.123393e-51 | -8.615850e-47 |
| Msa0705870 | Msa1264020 | 0.807101 | 5.959368e-50 | -8.615850e-47 |
| Msa0705870 | Msa1270610 | 0.814601 | 1.417663e-51 | -8.615850e-47 |
| Msa0705870 | Msa1271300 | 0.803256 | 3.802108e-49 | -8.615850e-47 |
| Msa0705870 | Msa1283860 | 0.843475 | 1.370057e-58 | -8.615850e-47 |
| Msa0705870 | Msa1284260 | 0.809459 | 1.872207e-50 | -8.615850e-47 |
| Msa0705870 | Msa1299300 | -0.812222 | 4.725485e-51 | -8.615850e-47 |
| Msa0705870 | Msa1308380 | 0.831935 | 1.258780e-55 | -8.615850e-47 |
| Msa0705870 | Msa1313150 | 0.828332 | 9.534719e-55 | -8.615850e-47 |
| Msa0705870 | Msa1316780 | 0.814334 | 1.624468e-51 | -8.615850e-47 |
| Msa0705870 | Msa1322860 | 0.813763 | 2.170692e-51 | -8.615850e-47 |
| Msa0705870 | Msa1322890 | 0.802341 | 5.872854e-49 | -8.615850e-47 |
| Msa0705870 | Msa1327050 | 0.810081 | 1.376259e-50 | -8.615850e-47 |
| Msa0705870 | Msa1343070 | 0.837551 | 4.862134e-57 | -8.615850e-47 |
| Msa0705870 | Msa1355800 | 0.801391 | 9.206575e-49 | -8.615850e-47 |
| Msa0705870 | Msa1364470 | -0.812208 | 4.759997e-51 | -8.615850e-47 |
| Msa0705870 | Msa1367080 | 0.808358 | 3.220558e-50 | -8.615850e-47 |
| Msa0705870 | Msa1368210 | 0.810098 | 1.364583e-50 | -8.615850e-47 |
| Msa0705870 | Msa1371430 | 0.834816 | 2.407820e-56 | -8.615850e-47 |
| Msa0705870 | Msa1373330 | 0.812902 | 3.355350e-51 | -8.615850e-47 |
| Msa0705870 | Msa1374040 | 0.809408 | 1.920525e-50 | -8.615850e-47 |
| Msa0705870 | Msa1375680 | 0.801335 | 9.450323e-49 | -8.615850e-47 |
| Msa0705870 | Msa1384350 | 0.801057 | 1.077660e-48 | -8.615850e-47 |
| Msa0705870 | Msa1404730 | 0.802950 | 4.398550e-49 | -8.615850e-47 |
| Msa0705870 | Msa1409870 | 0.811974 | 5.351333e-51 | -8.615850e-47 |
| Msa0705870 | Msa1415640 | 0.829052 | 6.386264e-55 | -8.615850e-47 |
| Msa0705870 | Msa1423880 | 0.831220 | 1.888151e-55 | -8.615850e-47 |
| Msa0705870 | Msa1459180 | 0.822679 | 2.082273e-53 | -8.615850e-47 |
| Msa0124340 | Msa0705870 | 0.850158 | 2.034244e-60 | -8.615850e-47 |
| Msa0146260 | Msa0705870 | 0.814317 | 1.638797e-51 | -8.615850e-47 |
| Msa0150570 | Msa0705870 | 0.801167 | 1.022957e-48 | -8.615850e-47 |
| Msa0157290 | Msa0705870 | 0.836257 | 1.040642e-56 | -8.615850e-47 |
| Msa0171290 | Msa0705870 | 0.823306 | 1.487050e-53 | -8.615850e-47 |
| Msa0184960 | Msa0705870 | 0.811449 | 6.963049e-51 | -8.615850e-47 |
| Msa0186890 | Msa0705870 | 0.802021 | 6.836327e-49 | -8.615850e-47 |
| Msa0193120 | Msa0705870 | 0.801727 | 7.856602e-49 | -8.615850e-47 |
| Msa0196130 | Msa0705870 | -0.818638 | 1.765943e-52 | -8.615850e-47 |
| Msa0212990 | Msa0705870 | 0.806767 | 7.010915e-50 | -8.615850e-47 |
| Msa0225320 | Msa0705870 | 0.820922 | 5.308115e-53 | -8.615850e-47 |
| Msa0366240 | Msa0705870 | 0.806767 | 7.011458e-50 | -8.615850e-47 |
| Msa0388960 | Msa0705870 | 0.828401 | 9.176106e-55 | -8.615850e-47 |
| Msa0410500 | Msa0705870 | 0.837020 | 6.648239e-57 | -8.615850e-47 |
| Msa0410650 | Msa0705870 | 0.831130 | 1.986846e-55 | -8.615850e-47 |
| Msa0417270 | Msa0705870 | 0.814361 | 1.602444e-51 | -8.615850e-47 |
| Msa0417880 | Msa0705870 | 0.810878 | 9.260767e-51 | -8.615850e-47 |
| Msa0423040 | Msa0705870 | 0.801056 | 1.077760e-48 | -8.615850e-47 |
| Msa0432770 | Msa0705870 | 0.815064 | 1.119504e-51 | -8.615850e-47 |
| Msa0442670 | Msa0705870 | 0.801115 | 1.048450e-48 | -8.615850e-47 |
| Msa0469160 | Msa0705870 | 0.822212 | 2.672365e-53 | -8.615850e-47 |
| Msa0479170 | Msa0705870 | 0.802143 | 6.451088e-49 | -8.615850e-47 |
| Msa0480000 | Msa0705870 | 0.829051 | 6.390754e-55 | -8.615850e-47 |
| Msa0238890 | Msa0705870 | 0.819314 | 1.239630e-52 | -8.615850e-47 |
| Msa0244860 | Msa0705870 | 0.803443 | 3.478146e-49 | -8.615850e-47 |
| Msa0274360 | Msa0705870 | 0.806289 | 8.840683e-50 | -8.615850e-47 |
| Msa0283450 | Msa0705870 | 0.814209 | 1.731064e-51 | -8.615850e-47 |
| Msa0283520 | Msa0705870 | 0.824612 | 7.343502e-54 | -8.615850e-47 |
| Msa0284410 | Msa0705870 | 0.820031 | 8.502519e-53 | -8.615850e-47 |
| Msa0287650 | Msa0705870 | 0.803293 | 3.736282e-49 | -8.615850e-47 |
| Msa0297740 | Msa0705870 | 0.824817 | 6.572753e-54 | -8.615850e-47 |
| Msa0299890 | Msa0705870 | 0.807736 | 4.369922e-50 | -8.615850e-47 |
| Msa0311700 | Msa0705870 | 0.802482 | 5.495455e-49 | -8.615850e-47 |
| Msa0320100 | Msa0705870 | 0.801163 | 1.024779e-48 | -8.615850e-47 |
| Msa0330340 | Msa0705870 | 0.801849 | 7.416613e-49 | -8.615850e-47 |
| Msa0332000 | Msa0705870 | 0.824083 | 9.782664e-54 | -8.615850e-47 |
| Msa0337330 | Msa0705870 | 0.827481 | 1.527419e-54 | -8.615850e-47 |
| Msa0341910 | Msa0705870 | 0.805453 | 1.325121e-49 | -8.615850e-47 |
| Msa0342360 | Msa0705870 | 0.809733 | 1.635405e-50 | -8.615850e-47 |
| Msa0347770 | Msa0705870 | 0.802512 | 5.417334e-49 | -8.615850e-47 |
| Msa0362780 | Msa0705870 | 0.803043 | 4.208515e-49 | -8.615850e-47 |
| Msa0495320 | Msa0705870 | 0.821908 | 3.144136e-53 | -8.615850e-47 |
| Msa0495330 | Msa0705870 | 0.817359 | 3.436016e-52 | -8.615850e-47 |
| Msa0500360 | Msa0705870 | 0.825434 | 4.698680e-54 | -8.615850e-47 |
| Msa0503580 | Msa0705870 | 0.800307 | 1.532737e-48 | -8.615850e-47 |
| Msa0507680 | Msa0705870 | 0.840142 | 1.039112e-57 | -8.615850e-47 |
| Msa0515010 | Msa0705870 | 0.804104 | 2.535727e-49 | -8.615850e-47 |
| Msa0523460 | Msa0705870 | 0.812169 | 4.853338e-51 | -8.615850e-47 |
| Msa0541860 | Msa0705870 | 0.802147 | 6.440282e-49 | -8.615850e-47 |
| Msa0574890 | Msa0705870 | 0.803797 | 2.937140e-49 | -8.615850e-47 |
| Msa0584860 | Msa0705870 | 0.830773 | 2.431791e-55 | -8.615850e-47 |
| Msa0585230 | Msa0705870 | 0.815507 | 8.924254e-52 | -8.615850e-47 |
| Msa0602240 | Msa0705870 | 0.817007 | 4.123017e-52 | -8.615850e-47 |
| Msa0602250 | Msa0705870 | 0.819808 | 9.559798e-53 | -8.615850e-47 |
| Msa0602310 | Msa0705870 | 0.802249 | 6.137530e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705870 | MtrunA17_Chr8g0384601 | 100.000 | 363 | 0 | 0 | 1 | 363 | 1 | 363 | 0.0 | 758 |
| Msa0705870 | MtrunA17_Chr2g0289021 | 51.344 | 372 | 161 | 5 | 1 | 362 | 6 | 367 | 1.65e-134 | 389 |
| Msa0705870 | MtrunA17_Chr2g0298501 | 39.423 | 312 | 151 | 10 | 54 | 356 | 104 | 386 | 2.59e-62 | 204 |
| Msa0705870 | MtrunA17_Chr4g0071911 | 38.141 | 312 | 156 | 10 | 53 | 356 | 105 | 387 | 1.75e-60 | 199 |
| Msa0705870 | MtrunA17_Chr2g0298511 | 38.782 | 312 | 154 | 7 | 53 | 356 | 95 | 377 | 2.77e-59 | 196 |
| Msa0705870 | MtrunA17_Chr1g0151841 | 38.235 | 306 | 143 | 8 | 55 | 356 | 106 | 369 | 1.71e-57 | 191 |
| Msa0705870 | MtrunA17_Chr5g0423131 | 36.842 | 304 | 144 | 9 | 55 | 354 | 122 | 381 | 1.46e-53 | 181 |
| Msa0705870 | MtrunA17_Chr1g0148241 | 34.505 | 313 | 169 | 8 | 51 | 355 | 107 | 391 | 5.15e-52 | 177 |
| Msa0705870 | MtrunA17_Chr1g0209531 | 36.039 | 308 | 148 | 9 | 55 | 357 | 124 | 387 | 1.69e-51 | 176 |
| Msa0705870 | MtrunA17_Chr2g0276861 | 37.459 | 307 | 146 | 10 | 55 | 357 | 168 | 432 | 1.38e-50 | 174 |
| Msa0705870 | MtrunA17_Chr6g0484141 | 37.540 | 309 | 141 | 11 | 53 | 354 | 147 | 410 | 1.49e-50 | 174 |
| Msa0705870 | MtrunA17_Chr3g0138871 | 34.615 | 312 | 168 | 8 | 51 | 354 | 88 | 371 | 2.37e-50 | 172 |
| Msa0705870 | MtrunA17_Chr8g0341461 | 35.987 | 314 | 153 | 9 | 53 | 360 | 141 | 412 | 1.60e-49 | 171 |
| Msa0705870 | MtrunA17_Chr5g0394961 | 35.806 | 310 | 151 | 10 | 53 | 357 | 149 | 415 | 1.61e-47 | 166 |
| Msa0705870 | MtrunA17_Chr3g0136091 | 33.866 | 313 | 144 | 11 | 40 | 349 | 127 | 379 | 3.85e-44 | 156 |
| Msa0705870 | MtrunA17_Chr4g0073871 | 36.885 | 244 | 108 | 8 | 116 | 354 | 10 | 212 | 1.63e-37 | 134 |
| Msa0705870 | MtrunA17_Chr5g0394981 | 36.179 | 246 | 113 | 8 | 116 | 357 | 3 | 208 | 2.33e-37 | 134 |
| Msa0705870 | MtrunA17_Chr1g0170231 | 29.787 | 329 | 154 | 11 | 54 | 357 | 62 | 338 | 1.65e-30 | 119 |
| Msa0705870 | MtrunA17_Chr3g0137661 | 28.758 | 306 | 177 | 9 | 56 | 354 | 95 | 366 | 1.21e-27 | 112 |
| Msa0705870 | MtrunA17_Chr2g0322161 | 29.664 | 327 | 156 | 10 | 47 | 345 | 69 | 349 | 7.50e-25 | 103 |
| Msa0705870 | MtrunA17_Chr1g0170151 | 27.410 | 332 | 172 | 12 | 46 | 357 | 55 | 337 | 4.15e-22 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705870 | AT5G14550.1 | 69.542 | 371 | 98 | 4 | 1 | 359 | 1 | 368 | 0.0 | 541 |
| Msa0705870 | AT5G14550.3 | 70.219 | 366 | 94 | 4 | 1 | 354 | 1 | 363 | 0.0 | 538 |
| Msa0705870 | AT5G14550.4 | 65.574 | 366 | 84 | 5 | 1 | 354 | 1 | 336 | 1.27e-172 | 484 |
| Msa0705870 | AT5G14550.2 | 65.538 | 325 | 84 | 5 | 1 | 313 | 1 | 309 | 3.19e-154 | 437 |
| Msa0705870 | AT1G11940.1 | 50.000 | 368 | 170 | 5 | 2 | 361 | 16 | 377 | 2.08e-125 | 366 |
| Msa0705870 | AT1G62305.1 | 56.026 | 307 | 130 | 5 | 54 | 359 | 67 | 369 | 1.82e-120 | 353 |
| Msa0705870 | AT1G62305.2 | 51.140 | 307 | 121 | 6 | 54 | 359 | 67 | 345 | 9.61e-102 | 305 |
| Msa0705870 | AT1G62305.3 | 59.716 | 211 | 81 | 4 | 54 | 263 | 67 | 274 | 1.27e-81 | 252 |
| Msa0705870 | AT1G11940.2 | 52.101 | 238 | 103 | 3 | 2 | 231 | 16 | 250 | 1.02e-78 | 243 |
| Msa0705870 | AT4G31350.4 | 36.741 | 313 | 161 | 7 | 50 | 354 | 83 | 366 | 7.62e-59 | 195 |
| Msa0705870 | AT4G31350.1 | 36.741 | 313 | 161 | 7 | 50 | 354 | 83 | 366 | 7.62e-59 | 195 |
| Msa0705870 | AT4G31350.2 | 36.741 | 313 | 161 | 7 | 50 | 354 | 83 | 366 | 7.62e-59 | 195 |
| Msa0705870 | AT5G57270.3 | 38.095 | 315 | 152 | 10 | 54 | 356 | 96 | 379 | 1.20e-57 | 192 |
| Msa0705870 | AT5G57270.1 | 38.095 | 315 | 152 | 10 | 54 | 356 | 96 | 379 | 1.20e-57 | 192 |
| Msa0705870 | AT5G57270.4 | 38.095 | 315 | 152 | 10 | 54 | 356 | 96 | 379 | 1.20e-57 | 192 |
| Msa0705870 | AT5G57270.5 | 38.095 | 315 | 152 | 10 | 54 | 356 | 96 | 379 | 1.20e-57 | 192 |
| Msa0705870 | AT5G57270.2 | 38.095 | 315 | 152 | 10 | 54 | 356 | 96 | 379 | 1.20e-57 | 192 |
| Msa0705870 | AT1G10280.1 | 37.380 | 313 | 146 | 10 | 55 | 360 | 142 | 411 | 6.96e-56 | 188 |
| Msa0705870 | AT1G73810.1 | 38.782 | 312 | 143 | 11 | 56 | 360 | 147 | 417 | 5.43e-55 | 186 |
| Msa0705870 | AT4G31350.3 | 35.783 | 313 | 159 | 7 | 50 | 354 | 83 | 361 | 1.07e-54 | 184 |
| Msa0705870 | AT2G19160.2 | 36.246 | 309 | 161 | 8 | 56 | 356 | 106 | 386 | 2.29e-53 | 181 |
| Msa0705870 | AT2G19160.1 | 36.246 | 309 | 161 | 8 | 56 | 356 | 106 | 386 | 2.29e-53 | 181 |
| Msa0705870 | AT1G68390.1 | 34.202 | 307 | 157 | 7 | 55 | 357 | 137 | 402 | 3.57e-53 | 181 |
| Msa0705870 | AT4G25870.1 | 36.102 | 313 | 157 | 11 | 56 | 356 | 99 | 380 | 2.78e-51 | 176 |
| Msa0705870 | AT5G16170.1 | 37.299 | 311 | 151 | 9 | 56 | 360 | 136 | 408 | 4.04e-51 | 176 |
| Msa0705870 | AT5G11730.1 | 35.987 | 314 | 148 | 11 | 55 | 360 | 117 | 385 | 1.18e-50 | 174 |
| Msa0705870 | AT1G51770.1 | 35.831 | 307 | 150 | 8 | 55 | 357 | 123 | 386 | 3.48e-50 | 173 |
| Msa0705870 | AT4G30060.2 | 33.974 | 312 | 170 | 8 | 53 | 356 | 106 | 389 | 3.25e-49 | 171 |
| Msa0705870 | AT4G30060.1 | 33.974 | 312 | 170 | 8 | 53 | 356 | 106 | 389 | 3.25e-49 | 171 |
| Msa0705870 | AT1G10880.1 | 34.354 | 294 | 148 | 7 | 55 | 345 | 117 | 368 | 8.83e-48 | 166 |
| Msa0705870 | AT1G68380.1 | 35.505 | 307 | 151 | 9 | 55 | 357 | 123 | 386 | 1.55e-45 | 160 |
| Msa0705870 | AT3G21310.1 | 35.783 | 313 | 150 | 11 | 55 | 360 | 114 | 382 | 1.66e-45 | 160 |
| Msa0705870 | AT3G21310.3 | 35.783 | 313 | 150 | 11 | 55 | 360 | 114 | 382 | 1.66e-45 | 160 |
| Msa0705870 | AT5G25970.1 | 34.202 | 307 | 155 | 9 | 55 | 357 | 118 | 381 | 1.83e-44 | 157 |
| Msa0705870 | AT5G25970.2 | 34.202 | 307 | 155 | 9 | 55 | 357 | 118 | 381 | 1.83e-44 | 157 |
| Msa0705870 | AT5G25970.3 | 34.202 | 307 | 155 | 9 | 55 | 357 | 118 | 381 | 1.83e-44 | 157 |
| Msa0705870 | AT1G51770.2 | 31.683 | 303 | 141 | 8 | 55 | 357 | 123 | 359 | 7.42e-36 | 134 |
| Msa0705870 | AT5G25330.1 | 30.449 | 312 | 170 | 8 | 56 | 357 | 81 | 355 | 5.14e-34 | 129 |
| Msa0705870 | AT4G32290.1 | 29.808 | 312 | 177 | 9 | 56 | 357 | 93 | 372 | 1.01e-28 | 115 |
| Msa0705870 | AT3G52060.1 | 28.526 | 312 | 168 | 10 | 55 | 357 | 74 | 339 | 1.60e-28 | 114 |
| Msa0705870 | AT5G22070.1 | 29.429 | 350 | 167 | 14 | 40 | 357 | 54 | 355 | 3.37e-26 | 107 |
| Msa0705870 | AT3G21310.2 | 41.135 | 141 | 75 | 4 | 55 | 191 | 114 | 250 | 6.87e-24 | 99.8 |
Find 89 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGTTGGACAGTCTGTTT+TGG | 0.165391 | 4_4:-78689836 | Msa0705870:intron |
| AAAAGCCGCTACCCGAATTT+TGG | 0.189280 | 4_4:-78691542 | Msa0705870:CDS |
| GATGCGGTATACTCATGTTT+TGG | 0.236011 | 4_4:-78695188 | Msa0705870:CDS |
| TGGTTTGGGATGCATTCTTT+AGG | 0.289253 | 4_4:-78695072 | Msa0705870:CDS |
| CAGTTATTCCAGTTTATAAC+TGG | 0.289938 | 4_4:-78692052 | Msa0705870:CDS |
| GAATATCAGAAAAGTGTTAA+AGG | 0.295171 | 4_4:+78695836 | None:intergenic |
| TTCTTGCTAAATTCTTTATT+AGG | 0.305249 | 4_4:-78695460 | Msa0705870:five_prime_UTR |
| GCTTCCTTTGGAATTGGTTT+GGG | 0.305701 | 4_4:-78695086 | Msa0705870:CDS |
| GGTTTGGGATGCATTCTTTA+GGG | 0.307058 | 4_4:-78695071 | Msa0705870:intron |
| TTGGTGGTGGTGCTTTGTTT+TGG | 0.307690 | 4_4:-78695229 | Msa0705870:CDS |
| TAAATTCTTTATTAGGCTAT+TGG | 0.309438 | 4_4:-78695453 | Msa0705870:five_prime_UTR |
| GATGCTTATTAAATTTATAA+AGG | 0.310256 | 4_4:-78690862 | Msa0705870:intron |
| TTGAAATGAGTGTTAAAGTT+TGG | 0.313532 | 4_4:-78695385 | Msa0705870:five_prime_UTR |
| GACTTGATCCCTCCAAAATT+CGG | 0.318399 | 4_4:+78691530 | None:intergenic |
| GGCTTCCTTTGGAATTGGTT+TGG | 0.319839 | 4_4:-78695087 | Msa0705870:CDS |
| TAGTAAACTTTCTTGCAAAA+AGG | 0.331608 | 4_4:+78690262 | None:intergenic |
| TACAACCTTGGCATGCTTCC+TGG | 0.336465 | 4_4:+78691882 | None:intergenic |
| AGAAAGTGGTTCAGCAGAAA+TGG | 0.341229 | 4_4:-78695276 | Msa0705870:CDS |
| CAGTTATAAACTGGAATAAC+TGG | 0.344271 | 4_4:+78692053 | None:intergenic |
| AATATCAGAAAAGTGTTAAA+GGG | 0.354961 | 4_4:+78695837 | None:intergenic |
| ATGAAGAGAAAAGCAATCTT+AGG | 0.355547 | 4_4:+78695121 | None:intergenic |
| TGCAAGGAATAGGCTTCCTT+TGG | 0.360242 | 4_4:-78695098 | Msa0705870:CDS |
| TCCACGGCGCTCACGATCTC+TGG | 0.364508 | 4_4:+78690923 | None:intergenic |
| GAATTAACTTGGGCTATGTT+TGG | 0.368470 | 4_4:-78689494 | Msa0705870:three_prime_UTR |
| GAATAGGCTTCCTTTGGAAT+TGG | 0.368624 | 4_4:-78695092 | Msa0705870:CDS |
| ATTAGGCTATTGGTTTGGTA+TGG | 0.398215 | 4_4:-78695443 | Msa0705870:five_prime_UTR |
| TTCTCTTCATTGCAAGGAAT+AGG | 0.401929 | 4_4:-78695108 | Msa0705870:CDS |
| TGCAGTGGGCTGTGCTGACC+AGG | 0.406399 | 4_4:-78691900 | Msa0705870:intron |
| GTTTGAACATAGTGTTCATC+TGG | 0.409473 | 4_4:+78691244 | None:intergenic |
| AAAACAAAGCGGTCATTTAG+AGG | 0.415697 | 4_4:+78692997 | None:intergenic |
| CCAGTTTATAACTGGAGAAA+AGG | 0.418484 | 4_4:-78692044 | Msa0705870:CDS |
| TTGGTTTGGTATGGATCTGT+TGG | 0.428962 | 4_4:-78695434 | Msa0705870:five_prime_UTR |
| TGCTTGTACACCATTCTCTT+CGG | 0.432521 | 4_4:+78690307 | None:intergenic |
| CTATCCACAAAGCAATATAA+AGG | 0.433889 | 4_4:+78695496 | None:intergenic |
| TCTTTATTAGGCTATTGGTT+TGG | 0.435068 | 4_4:-78695448 | Msa0705870:five_prime_UTR |
| TGGTATACAGTTGTGGATCT+TGG | 0.438795 | 4_4:+78691264 | None:intergenic |
| GTGTAGCTGAAGTTGTATAA+AGG | 0.444599 | 4_4:+78692460 | None:intergenic |
| ACTTGATCCCTCCAAAATTC+GGG | 0.445648 | 4_4:+78691531 | None:intergenic |
| TTACTAGGACTGCTGCTTTG+AGG | 0.451390 | 4_4:-78690245 | Msa0705870:CDS |
| CTAAATGTACAATACAATAT+CGG | 0.452590 | 4_4:+78689679 | None:intergenic |
| ACACTATGTTCAAACATTGC+TGG | 0.459415 | 4_4:-78691236 | Msa0705870:CDS |
| TGCTTTGAGGCTTCTTAACA+TGG | 0.485012 | 4_4:-78690232 | Msa0705870:intron |
| ACTCACAACATGAATTAACT+TGG | 0.486200 | 4_4:-78689505 | Msa0705870:three_prime_UTR |
| TTTATAAATTTAATAAGCAT+CGG | 0.496105 | 4_4:+78690864 | None:intergenic |
| TAACTGGAGAAAAGGATCTC+AGG | 0.503043 | 4_4:-78692036 | Msa0705870:intron |
| TGGATCTTGGACGTGTCAGC+AGG | 0.503820 | 4_4:+78691277 | None:intergenic |
| GCGCTCACGATCTCTGGAGT+TGG | 0.504969 | 4_4:+78690929 | None:intergenic |
| TACAGCTTCGCTGACACAAA+AGG | 0.505137 | 4_4:-78692101 | Msa0705870:intron |
| ATCGTCCTCCACTACAACCT+TGG | 0.509580 | 4_4:+78691870 | None:intergenic |
| CACCTATCGACAAAACTAGT+TGG | 0.511751 | 4_4:+78692415 | None:intergenic |
| TCCCTCCAAAATTCGGGTAG+CGG | 0.515418 | 4_4:+78691537 | None:intergenic |
| TCTGAGAACTTATAAGTCAC+TGG | 0.518003 | 4_4:+78690894 | None:intergenic |
| GTAGAATATGAAGAAGAAAG+TGG | 0.518812 | 4_4:-78695290 | Msa0705870:exon |
| TCAAGTTAATGATAGCATAC+AGG | 0.530790 | 4_4:-78693926 | Msa0705870:intron |
| TTGAATTGATTTGAAATGGT+GGG | 0.531524 | 4_4:-78695339 | Msa0705870:five_prime_UTR |
| GCCAGGGTTTGTGTTGAATG+AGG | 0.535969 | 4_4:-78693980 | Msa0705870:CDS |
| GGGTGAAGCAAGCATGATAG+AGG | 0.536814 | 4_4:-78693055 | Msa0705870:CDS |
| TCAGCAGAAATGGAAGAAGA+AGG | 0.538184 | 4_4:-78695266 | Msa0705870:CDS |
| GGCTATGTTTGGTTCAAATG+AGG | 0.540156 | 4_4:-78689483 | Msa0705870:three_prime_UTR |
| AAGAGAATGGTGTACAAGCA+AGG | 0.546374 | 4_4:-78690304 | Msa0705870:CDS |
| TTTGAATTGATTTGAAATGG+TGG | 0.548180 | 4_4:-78695340 | Msa0705870:five_prime_UTR |
| ACTCTGCTTGTATCAGCCAC+TGG | 0.557794 | 4_4:+78689780 | None:intergenic |
| GAAGCATGCCAAGGTTGTAG+TGG | 0.562145 | 4_4:-78691878 | Msa0705870:CDS |
| ATTGATTTGAAATGGTGGGT+TGG | 0.566299 | 4_4:-78695335 | Msa0705870:five_prime_UTR |
| TTCAACACAAACCCTGGCCT+AGG | 0.569608 | 4_4:+78693985 | None:intergenic |
| GTTCATCTGGTATACAGTTG+TGG | 0.575948 | 4_4:+78691257 | None:intergenic |
| GCCTCATTCAACACAAACCC+TGG | 0.577011 | 4_4:+78693979 | None:intergenic |
| ATATCAGAAAAGTGTTAAAG+GGG | 0.582431 | 4_4:+78695838 | None:intergenic |
| ATGTCTAAGTAAAATTCGCT+CGG | 0.583854 | 4_4:+78693032 | None:intergenic |
| TGAGTGTTAAGAGTGGAACA+AGG | 0.586057 | 4_4:+78695869 | None:intergenic |
| AACAAAATGCTTATTGCCAG+TGG | 0.587980 | 4_4:-78689796 | Msa0705870:three_prime_UTR |
| CTCACAACATGAATTAACTT+GGG | 0.591678 | 4_4:-78689504 | Msa0705870:three_prime_UTR |
| GATCAGTGACACATACTGCA+TGG | 0.596005 | 4_4:-78690959 | Msa0705870:CDS |
| GTTTGTTGTTTATGCAGATG+CGG | 0.596175 | 4_4:-78695204 | Msa0705870:CDS |
| ATCAGTGACACATACTGCAT+GGG | 0.597196 | 4_4:-78690958 | Msa0705870:CDS |
| AGAGAATGGTGTACAAGCAA+GGG | 0.597758 | 4_4:-78690303 | Msa0705870:CDS |
| GAGATCGTGAGCGCCGTGGA+TGG | 0.599731 | 4_4:-78690920 | Msa0705870:CDS |
| TGTAGAGTGAGTGTTAAGAG+TGG | 0.600600 | 4_4:+78695862 | None:intergenic |
| GCATGCCAAGGTTGTAGTGG+AGG | 0.609985 | 4_4:-78691875 | Msa0705870:CDS |
| TTGGATCTTCTACTTCTGAG+TGG | 0.624570 | 4_4:-78695415 | Msa0705870:five_prime_UTR |
| AGACTGAATACCGAAGAGAA+TGG | 0.627600 | 4_4:-78690317 | Msa0705870:CDS |
| AAGTCACTGGATGCCATCCA+CGG | 0.632825 | 4_4:+78690907 | None:intergenic |
| GCATCCCAAACCAATTCCAA+AGG | 0.633005 | 4_4:+78695082 | None:intergenic |
| TCCAGAGATCGTGAGCGCCG+TGG | 0.637645 | 4_4:-78690924 | Msa0705870:CDS |
| GAGTGAGACATTGTTTATGT+CGG | 0.638091 | 4_4:+78689524 | None:intergenic |
| TATACCCTCACCTATCTGAG+AGG | 0.685286 | 4_4:+78692974 | None:intergenic |
| AGCTTCGCTGACACAAAAGG+AGG | 0.705360 | 4_4:-78692098 | Msa0705870:CDS |
| GCTGACCAGGAAGCATGCCA+AGG | 0.707493 | 4_4:-78691887 | Msa0705870:CDS |
| TATCTGAGAGGAAAACAAAG+CGG | 0.756541 | 4_4:+78692986 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAATTTAATAAGCAT+CGG | + | chr4_4:78694491-78694510 | None:intergenic | 10.0% |
| !!! | TAATTAATATTTTGTTAGAA+TGG | - | chr4_4:78694626-78694645 | Msa0705870:intron | 10.0% |
| !!! | TGATTTATTTTTTTTTTTGT+AGG | - | chr4_4:78694991-78695010 | Msa0705870:intron | 10.0% |
| !!! | ACTATTATTTTTTATAATGA+GGG | + | chr4_4:78695794-78695813 | None:intergenic | 10.0% |
| !!! | AACTATTATTTTTTATAATG+AGG | + | chr4_4:78695795-78695814 | None:intergenic | 10.0% |
| !!! | TTTTGTTTCTATTTGTTTTT+TGG | - | chr4_4:78690331-78690350 | Msa0705870:CDS | 15.0% |
| !!! | TAATAGTAGTTTTTACTTTT+TGG | - | chr4_4:78690840-78690859 | Msa0705870:intron | 15.0% |
| !!! | TTGAAATAATCTCATTTTAT+CGG | - | chr4_4:78692117-78692136 | Msa0705870:intron | 15.0% |
| !! | TATATAATGATTGAAGTTTA+TGG | + | chr4_4:78692417-78692436 | None:intergenic | 15.0% |
| !! | ATTTAACAAAACTAATTGTT+GGG | + | chr4_4:78693120-78693139 | None:intergenic | 15.0% |
| !! | TATTTAACAAAACTAATTGT+TGG | + | chr4_4:78693121-78693140 | None:intergenic | 15.0% |
| !! | AAATGAATAATTAACTACAA+AGG | + | chr4_4:78693192-78693211 | None:intergenic | 15.0% |
| !! | GATGCTTATTAAATTTATAA+AGG | - | chr4_4:78694490-78694509 | Msa0705870:intron | 15.0% |
| !! | TATATAAACTAATAAAAGCA+AGG | - | chr4_4:78694684-78694703 | Msa0705870:intron | 15.0% |
| !! | AGAAAAAAAAAAAAAAAGCA+AGG | - | chr4_4:78694722-78694741 | Msa0705870:intron | 15.0% |
| !! | ATTAAGATTCAGAATTTATT+AGG | + | chr4_4:78694794-78694813 | None:intergenic | 15.0% |
| !!! | AATATCAGAAAAGTGTTAAA+GGG | + | chr4_4:78689518-78689537 | None:intergenic | 20.0% |
| !! | TTCTTGCTAAATTCTTTATT+AGG | - | chr4_4:78689892-78689911 | Msa0705870:intron | 20.0% |
| !! | TAAATTCTTTATTAGGCTAT+TGG | - | chr4_4:78689899-78689918 | Msa0705870:intron | 20.0% |
| !!! | AAATGAAATTTGTTAGTAGA+AGG | - | chr4_4:78690590-78690609 | Msa0705870:intron | 20.0% |
| !! | TTGTTTATGGTAAGATAATA+TGG | - | chr4_4:78690791-78690810 | Msa0705870:intron | 20.0% |
| !!! | TTTCTCTATATAGTTTTTCT+AGG | + | chr4_4:78691566-78691585 | None:intergenic | 20.0% |
| !! | AACTATATAGAGAAACTATT+AGG | - | chr4_4:78691571-78691590 | Msa0705870:intron | 20.0% |
| !! | GATAGAAATAAGAAACTATT+TGG | - | chr4_4:78691618-78691637 | Msa0705870:intron | 20.0% |
| !! | AACTATTTGGTAGAATATTA+TGG | - | chr4_4:78691631-78691650 | Msa0705870:intron | 20.0% |
| !!! | TTTGACTTTATTTGATCTTT+TGG | - | chr4_4:78691894-78691913 | Msa0705870:CDS | 20.0% |
| !! | TTATGTGTTTATTTATCACA+TGG | - | chr4_4:78692040-78692059 | Msa0705870:CDS | 20.0% |
| !!! | TTCTTTTGATGTTTTAAACA+TGG | + | chr4_4:78692185-78692204 | None:intergenic | 20.0% |
| !! | ATGTTAACTAAATATCATGA+AGG | + | chr4_4:78692256-78692275 | None:intergenic | 20.0% |
| !! | GGTTTCAAAAAAATTTAGTT+TGG | + | chr4_4:78692605-78692624 | None:intergenic | 20.0% |
| !! | AGATTAATGTCGTATATATA+TGG | + | chr4_4:78693013-78693032 | None:intergenic | 20.0% |
| !! | ATAAAAAGATAGGTATAAGA+TGG | + | chr4_4:78693423-78693442 | None:intergenic | 20.0% |
| !! | AGAAGAATTCATAAAAAGAT+AGG | + | chr4_4:78693433-78693452 | None:intergenic | 20.0% |
| !!! | TTGCAAAATTTTTGAAACAT+TGG | + | chr4_4:78693517-78693536 | None:intergenic | 20.0% |
| !!! | AATGTTTCAAAAATTTTGCA+AGG | - | chr4_4:78693516-78693535 | Msa0705870:intron | 20.0% |
| !! | GAAATAATAAATGAAGCAAA+AGG | + | chr4_4:78693631-78693650 | None:intergenic | 20.0% |
| !!! | TTGGGTTTTATAACATTTAA+TGG | + | chr4_4:78693691-78693710 | None:intergenic | 20.0% |
| !! | ATGGAATAAAAAACACTAAA+TGG | + | chr4_4:78693722-78693741 | None:intergenic | 20.0% |
| !! | TTCAATATTTCATTCTGAAT+TGG | - | chr4_4:78693970-78693989 | Msa0705870:CDS | 20.0% |
| !! | AAAATATTAAAGCAAAACCA+GGG | + | chr4_4:78694309-78694328 | None:intergenic | 20.0% |
| !! | AAAAATATTAAAGCAAAACC+AGG | + | chr4_4:78694310-78694329 | None:intergenic | 20.0% |
| !! | TTTCATTCTGTGATAATAAT+AGG | - | chr4_4:78694561-78694580 | Msa0705870:intron | 20.0% |
| !! | TTCATTCTGTGATAATAATA+GGG | - | chr4_4:78694562-78694581 | Msa0705870:intron | 20.0% |
| !! | TTGAGTTATTTATCTAAACA+AGG | - | chr4_4:78695459-78695478 | Msa0705870:five_prime_UTR | 20.0% |
| !! | CTAAATGTACAATACAATAT+CGG | + | chr4_4:78695676-78695695 | None:intergenic | 20.0% |
| !!! | ATATCAGAAAAGTGTTAAAG+GGG | + | chr4_4:78689517-78689536 | None:intergenic | 25.0% |
| !!! | GAATATCAGAAAAGTGTTAA+AGG | + | chr4_4:78689519-78689538 | None:intergenic | 25.0% |
| ! | TAGAATATCATTGCTCTATT+TGG | + | chr4_4:78689566-78689585 | None:intergenic | 25.0% |
| !!! | TCACAAAAGTTGTTGATTTT+TGG | + | chr4_4:78689593-78689612 | None:intergenic | 25.0% |
| !!! | ACTTTTCCTTTGAAAATTGA+TGG | + | chr4_4:78689619-78689638 | None:intergenic | 25.0% |
| !! | TTTTCCTTTATATTGCTTTG+TGG | - | chr4_4:78689852-78689871 | Msa0705870:intron | 25.0% |
| ! | TTGAAATGAGTGTTAAAGTT+TGG | - | chr4_4:78689967-78689986 | Msa0705870:intron | 25.0% |
| !!! | GCTTTTGAATTGATTTGAAA+TGG | - | chr4_4:78690009-78690028 | Msa0705870:intron | 25.0% |
| !!! | TTTGAATTGATTTGAAATGG+TGG | - | chr4_4:78690012-78690031 | Msa0705870:intron | 25.0% |
| !!! | TTGAATTGATTTGAAATGGT+GGG | - | chr4_4:78690013-78690032 | Msa0705870:intron | 25.0% |
| !! | TTTTAGATTCAAAAGGGTTA+GGG | - | chr4_4:78690040-78690059 | Msa0705870:intron | 25.0% |
| ! | ATCTGGAAAAAGAAACATAT+AGG | + | chr4_4:78690469-78690488 | None:intergenic | 25.0% |
| !!! | GTTGATGTTACCTTTTTTAT+AGG | - | chr4_4:78690538-78690557 | Msa0705870:intron | 25.0% |
| ! | CTAACATTTGCCTATAAAAA+AGG | + | chr4_4:78690551-78690570 | None:intergenic | 25.0% |
| !! | TTTTTATAGGCAAATGTTAG+TGG | - | chr4_4:78690551-78690570 | Msa0705870:intron | 25.0% |
| !!! | TGTTAGTGGTTGTTTTATTA+AGG | - | chr4_4:78690565-78690584 | Msa0705870:intron | 25.0% |
| !!! | GTTAGTGGTTGTTTTATTAA+GGG | - | chr4_4:78690566-78690585 | Msa0705870:intron | 25.0% |
| !!! | TTAGTGGTTGTTTTATTAAG+GGG | - | chr4_4:78690567-78690586 | Msa0705870:intron | 25.0% |
| ! | GACATAACTGTGTATTTAAA+AGG | + | chr4_4:78690915-78690934 | None:intergenic | 25.0% |
| ! | AAATCATTATTCCAAAGAAG+AGG | + | chr4_4:78691057-78691076 | None:intergenic | 25.0% |
| ! | AACATATGGTCAATAAGTTA+TGG | + | chr4_4:78691140-78691159 | None:intergenic | 25.0% |
| ! | TCCACAATAATTTAGCTAAA+GGG | + | chr4_4:78691172-78691191 | None:intergenic | 25.0% |
| ! | TTCCACAATAATTTAGCTAA+AGG | + | chr4_4:78691173-78691192 | None:intergenic | 25.0% |
| !! | AACATTTGTATTGCATTTTC+AGG | - | chr4_4:78691312-78691331 | Msa0705870:intron | 25.0% |
| !! | ACATTTGTATTGCATTTTCA+GGG | - | chr4_4:78691313-78691332 | Msa0705870:intron | 25.0% |
| ! | AAAAAGCTGATAACAACTTA+GGG | + | chr4_4:78691818-78691837 | None:intergenic | 25.0% |
| ! | AAAAAAGCTGATAACAACTT+AGG | + | chr4_4:78691819-78691838 | None:intergenic | 25.0% |
| ! | AAGCTCTTCTGTATAATTTA+TGG | - | chr4_4:78691843-78691862 | Msa0705870:CDS | 25.0% |
| ! | AAGTCAAACTTCTTTCATAT+AGG | + | chr4_4:78691882-78691901 | None:intergenic | 25.0% |
| ! | ATTAATCTGTTTATCCAAAC+AGG | - | chr4_4:78691949-78691968 | Msa0705870:intron | 25.0% |
| ! | TTAATCTGTTTATCCAAACA+GGG | - | chr4_4:78691950-78691969 | Msa0705870:intron | 25.0% |
| ! | ACTTTATGAACAATTCAGTT+CGG | + | chr4_4:78692492-78692511 | None:intergenic | 25.0% |
| ! | ACTGAATTGTTCATAAAGTT+TGG | - | chr4_4:78692493-78692512 | Msa0705870:intron | 25.0% |
| !!! | TTCTAATATTCGATTTGGTT+TGG | + | chr4_4:78692670-78692689 | None:intergenic | 25.0% |
| !! | AACAGTTCTAATATTCGATT+TGG | + | chr4_4:78692675-78692694 | None:intergenic | 25.0% |
| !!! | TAGTTATCAGTTTTGTTTCA+CGG | + | chr4_4:78692724-78692743 | None:intergenic | 25.0% |
| ! | TGAAACAAAACTGATAACTA+GGG | - | chr4_4:78692724-78692743 | Msa0705870:intron | 25.0% |
| ! | CAATCAACTGAAATATAGTA+AGG | + | chr4_4:78692852-78692871 | None:intergenic | 25.0% |
| ! | TTGAGACACATAATATAAGA+AGG | + | chr4_4:78693550-78693569 | None:intergenic | 25.0% |
| ! | CTTATATTATGTGTCTCAAT+TGG | - | chr4_4:78693551-78693570 | Msa0705870:intron | 25.0% |
| ! | AATAATAGGGTTATCATACT+AGG | - | chr4_4:78694575-78694594 | Msa0705870:intron | 25.0% |
| !!! | TTCTAAGTCTTGTTAAATAG+CGG | - | chr4_4:78694914-78694933 | Msa0705870:intron | 25.0% |
| ! | TAGTAAACTTTCTTGCAAAA+AGG | + | chr4_4:78695093-78695112 | None:intergenic | 25.0% |
| !! | TTTTTGCAAGAAAGTTTACT+AGG | - | chr4_4:78695092-78695111 | Msa0705870:CDS | 25.0% |
| ! | ATGGTAAGTTCATATATCAT+AGG | - | chr4_4:78695139-78695158 | Msa0705870:CDS | 25.0% |
| ! | TGGTAAGTTCATATATCATA+GGG | - | chr4_4:78695140-78695159 | Msa0705870:CDS | 25.0% |
| !! | TTTAGTTTCTTCGATTTGAT+TGG | - | chr4_4:78695219-78695238 | Msa0705870:CDS | 25.0% |
| ! | AAAGTCAAACTATGTTTCAT+AGG | + | chr4_4:78695365-78695384 | None:intergenic | 25.0% |
| ! | ATAAGTGCTTATCATATTAG+TGG | + | chr4_4:78695424-78695443 | None:intergenic | 25.0% |
| ! | CAGAAAATAAGTAACAATCT+CGG | + | chr4_4:78695493-78695512 | None:intergenic | 25.0% |
| ! | TGACAACCATCAATTTTCAA+AGG | - | chr4_4:78689610-78689629 | Msa0705870:three_prime_UTR | 30.0% |
| AGGAAAAGTAGATAGTAACA+CGG | - | chr4_4:78689630-78689649 | Msa0705870:three_prime_UTR | 30.0% | |
| ACTTTCTCTCTCTATTACTT+TGG | + | chr4_4:78689659-78689678 | None:intergenic | 30.0% | |
| !! | GTGAAAGTGTTGCTATTATT+TGG | + | chr4_4:78689760-78689779 | None:intergenic | 30.0% |
| CTATCCACAAAGCAATATAA+AGG | + | chr4_4:78689859-78689878 | None:intergenic | 30.0% | |
| ! | TCTTTATTAGGCTATTGGTT+TGG | - | chr4_4:78689904-78689923 | Msa0705870:intron | 30.0% |
| !!! | GGTTGGTTTTAGATTCAAAA+GGG | - | chr4_4:78690034-78690053 | Msa0705870:intron | 30.0% |
| !! | GTTTTAGATTCAAAAGGGTT+AGG | - | chr4_4:78690039-78690058 | Msa0705870:intron | 30.0% |
| GTAGAATATGAAGAAGAAAG+TGG | - | chr4_4:78690062-78690081 | Msa0705870:intron | 30.0% | |
| !! | GAAGGTTTTTGCTTTGATTT+TGG | - | chr4_4:78690104-78690123 | Msa0705870:intron | 30.0% |
| ATGAAGAGAAAAGCAATCTT+AGG | + | chr4_4:78690234-78690253 | None:intergenic | 30.0% | |
| !!! | TTTTACTTTTTGGAGAGCTT+AGG | - | chr4_4:78690850-78690869 | Msa0705870:intron | 30.0% |
| AAATACACAGTTATGTCCTT+TGG | - | chr4_4:78690918-78690937 | Msa0705870:CDS | 30.0% | |
| AATACACAGTTATGTCCTTT+GGG | - | chr4_4:78690919-78690938 | Msa0705870:CDS | 30.0% | |
| GATTGAGTATTTAAGTGACT+TGG | - | chr4_4:78690969-78690988 | Msa0705870:CDS | 30.0% | |
| TTAAAAGCTAGCTATCAAGA+GGG | + | chr4_4:78691000-78691019 | None:intergenic | 30.0% | |
| CCACAATAATTTAGCTAAAG+GGG | + | chr4_4:78691171-78691190 | None:intergenic | 30.0% | |
| ATTTCATAGAATGCTAGTTG+TGG | - | chr4_4:78691260-78691279 | Msa0705870:CDS | 30.0% | |
| TCAAGTTAATGATAGCATAC+AGG | - | chr4_4:78691426-78691445 | Msa0705870:intron | 30.0% | |
| CATAAGATAGTAAATGGACA+TGG | + | chr4_4:78691499-78691518 | None:intergenic | 30.0% | |
| CCAACACATAAGATAGTAAA+TGG | + | chr4_4:78691505-78691524 | None:intergenic | 30.0% | |
| CCATTTACTATCTTATGTGT+TGG | - | chr4_4:78691502-78691521 | Msa0705870:intron | 30.0% | |
| AATAAGCTGTTATAGTTGAC+TGG | - | chr4_4:78691529-78691548 | Msa0705870:CDS | 30.0% | |
| ATAAGCTGTTATAGTTGACT+GGG | - | chr4_4:78691530-78691549 | Msa0705870:CDS | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr4_4:78691596-78691615 | Msa0705870:intron | 30.0% | |
| ! | TCAAATAAGTCGATTCAAAC+AGG | + | chr4_4:78691727-78691746 | None:intergenic | 30.0% |
| TAATCTGTTTATCCAAACAG+GGG | - | chr4_4:78691951-78691970 | Msa0705870:intron | 30.0% | |
| TAATGTTACATTCCTTTCCT+TGG | - | chr4_4:78691976-78691995 | Msa0705870:intron | 30.0% | |
| AGACTATAGAACTTCATAGT+TGG | + | chr4_4:78692015-78692034 | None:intergenic | 30.0% | |
| ! | TGATCTTTTTGCAGATAGAT+TGG | - | chr4_4:78692275-78692294 | Msa0705870:intron | 30.0% |
| ! | GATCTTTTTGCAGATAGATT+GGG | - | chr4_4:78692276-78692295 | Msa0705870:intron | 30.0% |
| ! | ATCTTTTTGCAGATAGATTG+GGG | - | chr4_4:78692277-78692296 | Msa0705870:intron | 30.0% |
| ATGTCTAAGTAAAATTCGCT+CGG | + | chr4_4:78692323-78692342 | None:intergenic | 30.0% | |
| AAACCAAATGATTCTTTGTG+AGG | - | chr4_4:78692620-78692639 | Msa0705870:intron | 30.0% | |
| GTGAAACAAAACTGATAACT+AGG | - | chr4_4:78692723-78692742 | Msa0705870:intron | 30.0% | |
| CCATATAATTAAGCAACGTA+TGG | + | chr4_4:78692784-78692803 | None:intergenic | 30.0% | |
| CCATACGTTGCTTAATTATA+TGG | - | chr4_4:78692781-78692800 | Msa0705870:intron | 30.0% | |
| CAGTTATAAACTGGAATAAC+TGG | + | chr4_4:78693302-78693321 | None:intergenic | 30.0% | |
| CAGTTATTCCAGTTTATAAC+TGG | - | chr4_4:78693300-78693319 | Msa0705870:intron | 30.0% | |
| ! | TTTTATGAATTCTTCTGCAG+TGG | - | chr4_4:78693437-78693456 | Msa0705870:intron | 30.0% |
| TTTATGAATTCTTCTGCAGT+GGG | - | chr4_4:78693438-78693457 | Msa0705870:intron | 30.0% | |
| AGACACATAATATAAGAAGG+AGG | + | chr4_4:78693547-78693566 | None:intergenic | 30.0% | |
| ! | AAAACCATGAGAGTATATGA+TGG | + | chr4_4:78693655-78693674 | None:intergenic | 30.0% |
| CACTAAATGGAAGAAAGATT+GGG | + | chr4_4:78693709-78693728 | None:intergenic | 30.0% | |
| ACACTAAATGGAAGAAAGAT+TGG | + | chr4_4:78693710-78693729 | None:intergenic | 30.0% | |
| ATTGGTACATGATGTCAATT+AGG | - | chr4_4:78693988-78694007 | Msa0705870:CDS | 30.0% | |
| !! | GAATGGTACTTGATAATGAT+AGG | - | chr4_4:78694643-78694662 | Msa0705870:intron | 30.0% |
| ATTCAGAATTTATTAGGAGC+AGG | + | chr4_4:78694788-78694807 | None:intergenic | 30.0% | |
| ATCTTTCATTAGTTGACTGA+CGG | + | chr4_4:78694825-78694844 | None:intergenic | 30.0% | |
| ! | TTATTTTCATAAGCTTGCCA+AGG | - | chr4_4:78695336-78695355 | Msa0705870:five_prime_UTR | 30.0% |
| !! | CTTATTTTCTGATTCTCTGT+TGG | - | chr4_4:78695502-78695521 | Msa0705870:five_prime_UTR | 30.0% |
| ACTCACAACATGAATTAACT+TGG | - | chr4_4:78695847-78695866 | Msa0705870:five_prime_UTR | 30.0% | |
| CTCACAACATGAATTAACTT+GGG | - | chr4_4:78695848-78695867 | Msa0705870:five_prime_UTR | 30.0% | |
| GAGAGATAAAGTTGTCACAT+AGG | - | chr4_4:78689698-78689717 | Msa0705870:three_prime_UTR | 35.0% | |
| TCACATAGGTTGTCACAAAA+TGG | - | chr4_4:78689712-78689731 | Msa0705870:three_prime_UTR | 35.0% | |
| !! | ATTAGGCTATTGGTTTGGTA+TGG | - | chr4_4:78689909-78689928 | Msa0705870:intron | 35.0% |
| !! | ATTGATTTGAAATGGTGGGT+TGG | - | chr4_4:78690017-78690036 | Msa0705870:intron | 35.0% |
| !!! | GGGTTGGTTTTAGATTCAAA+AGG | - | chr4_4:78690033-78690052 | Msa0705870:intron | 35.0% |
| !! | GGTTTTTGCTTTGATTTTGG+TGG | - | chr4_4:78690107-78690126 | Msa0705870:intron | 35.0% |
| !! | TTTTGCTTTGATTTTGGTGG+TGG | - | chr4_4:78690110-78690129 | Msa0705870:intron | 35.0% |
| !! | GTTTGTTGTTTATGCAGATG+CGG | - | chr4_4:78690148-78690167 | Msa0705870:intron | 35.0% |
| ! | ATGCGGTATACTCATGTTTT+GGG | - | chr4_4:78690165-78690184 | Msa0705870:intron | 35.0% |
| !! | TTGCTTTTCTCTTCATTGCA+AGG | - | chr4_4:78690238-78690257 | Msa0705870:CDS | 35.0% |
| TTCTCTTCATTGCAAGGAAT+AGG | - | chr4_4:78690244-78690263 | Msa0705870:CDS | 35.0% | |
| ! | GTGTGTACTTGGTGATTAAT+AGG | - | chr4_4:78690374-78690393 | Msa0705870:intron | 35.0% |
| ! | TGTACTTGGTGATTAATAGG+AGG | - | chr4_4:78690377-78690396 | Msa0705870:intron | 35.0% |
| !! | AGTGTTACAAGTTCTGAATC+TGG | + | chr4_4:78690486-78690505 | None:intergenic | 35.0% |
| AATATTACGAACGAGGATCT+AGG | + | chr4_4:78690623-78690642 | None:intergenic | 35.0% | |
| ATCAACACATCCTCAAAGAA+GGG | + | chr4_4:78690656-78690675 | None:intergenic | 35.0% | |
| ! | ATCATTGATTAGTGCAGTGT+AGG | - | chr4_4:78690763-78690782 | Msa0705870:intron | 35.0% |
| ! | TCATTGATTAGTGCAGTGTA+GGG | - | chr4_4:78690764-78690783 | Msa0705870:intron | 35.0% |
| AGTGTAGGGACAATTGTTTA+TGG | - | chr4_4:78690778-78690797 | Msa0705870:intron | 35.0% | |
| ATACACAGTTATGTCCTTTG+GGG | - | chr4_4:78690920-78690939 | Msa0705870:CDS | 35.0% | |
| CTTAAAAGCTAGCTATCAAG+AGG | + | chr4_4:78691001-78691020 | None:intergenic | 35.0% | |
| !!! | TGATAGCTAGCTTTTAAGAG+AGG | - | chr4_4:78691003-78691022 | Msa0705870:intron | 35.0% |
| !!! | GATAGCTAGCTTTTAAGAGA+GGG | - | chr4_4:78691004-78691023 | Msa0705870:intron | 35.0% |
| ! | TGACAAGTATCAAAGCACTT+GGG | + | chr4_4:78691033-78691052 | None:intergenic | 35.0% |
| ! | ATGACAAGTATCAAAGCACT+TGG | + | chr4_4:78691034-78691053 | None:intergenic | 35.0% |
| ATACTTGTCATCCTCTTCTT+TGG | - | chr4_4:78691043-78691062 | Msa0705870:intron | 35.0% | |
| AAATGTTGTTATGACAAGCG+AGG | + | chr4_4:78691097-78691116 | None:intergenic | 35.0% | |
| CCCCTTTAGCTAAATTATTG+TGG | - | chr4_4:78691168-78691187 | Msa0705870:intron | 35.0% | |
| !! | TTTGTATTGCATTTTCAGGG+AGG | - | chr4_4:78691316-78691335 | Msa0705870:intron | 35.0% |
| ! | TCTCAATTTTCGTTCATCCT+AGG | - | chr4_4:78691350-78691369 | Msa0705870:intron | 35.0% |
| ! | GTTGTTGTTGTAGTTGACTT+AGG | - | chr4_4:78691701-78691720 | Msa0705870:intron | 35.0% |
| TTCAATCTCACAAGCGTTTA+TGG | + | chr4_4:78691762-78691781 | None:intergenic | 35.0% | |
| GAGATTGAATGAGAGAACTT+AGG | - | chr4_4:78691773-78691792 | Msa0705870:intron | 35.0% | |
| TGTAACATTAAACCCCTGTT+TGG | + | chr4_4:78691966-78691985 | None:intergenic | 35.0% | |
| AAAACAAAGCGGTCATTTAG+AGG | + | chr4_4:78692358-78692377 | None:intergenic | 35.0% | |
| TATCTGAGAGGAAAACAAAG+CGG | + | chr4_4:78692369-78692388 | None:intergenic | 35.0% | |
| AAGTACTCTCCACTTACTAT+AGG | - | chr4_4:78692436-78692455 | Msa0705870:CDS | 35.0% | |
| ATGAAGAGTCCTATAGTAAG+TGG | + | chr4_4:78692448-78692467 | None:intergenic | 35.0% | |
| ACTTACTATAGGACTCTTCA+TGG | - | chr4_4:78692447-78692466 | Msa0705870:CDS | 35.0% | |
| AGTCCTCACAAAGAATCATT+TGG | + | chr4_4:78692626-78692645 | None:intergenic | 35.0% | |
| GAAAAAGCAAAAAACTGAGC+TGG | - | chr4_4:78692697-78692716 | Msa0705870:intron | 35.0% | |
| GTGTAGCTGAAGTTGTATAA+AGG | + | chr4_4:78692895-78692914 | None:intergenic | 35.0% | |
| AGGTCGTTACAATCCAAAAA+TGG | - | chr4_4:78693274-78693293 | Msa0705870:intron | 35.0% | |
| ! | GGAATAACTGGATCCATTTT+TGG | + | chr4_4:78693290-78693309 | None:intergenic | 35.0% |
| ! | CCTTTTCTCCAGTTATAAAC+TGG | + | chr4_4:78693311-78693330 | None:intergenic | 35.0% |
| CCAGTTTATAACTGGAGAAA+AGG | - | chr4_4:78693308-78693327 | Msa0705870:intron | 35.0% | |
| TTCTCCATCATATACTCTCA+TGG | - | chr4_4:78693648-78693667 | Msa0705870:intron | 35.0% | |
| AAGAGACAAGCACAAATGTA+TGG | + | chr4_4:78693741-78693760 | None:intergenic | 35.0% | |
| ATGATGTCAATTAGGTTCGT+AGG | - | chr4_4:78693996-78694015 | Msa0705870:CDS | 35.0% | |
| GTTTGAACATAGTGTTCATC+TGG | + | chr4_4:78694111-78694130 | None:intergenic | 35.0% | |
| ACACTATGTTCAAACATTGC+TGG | - | chr4_4:78694116-78694135 | Msa0705870:intron | 35.0% | |
| ! | GAGGTCTTTTTGCTAGATTT+GGG | + | chr4_4:78694354-78694373 | None:intergenic | 35.0% |
| !! | TTCGTGTTAGTTCTTTTTCG+AGG | + | chr4_4:78694373-78694392 | None:intergenic | 35.0% |
| TCTGAGAACTTATAAGTCAC+TGG | + | chr4_4:78694461-78694480 | None:intergenic | 35.0% | |
| ! | TCAAGAAAGTGATTTTGCAG+TGG | + | chr4_4:78694535-78694554 | None:intergenic | 35.0% |
| ! | AAAAGCAAGGTGTGAGATTT+TGG | - | chr4_4:78694735-78694754 | Msa0705870:intron | 35.0% |
| ATTTATTAGGAGCAGGATCA+AGG | + | chr4_4:78694781-78694800 | None:intergenic | 35.0% | |
| !! | CAGTCTAAAGGTGTTTATGT+CGG | + | chr4_4:78695263-78695282 | None:intergenic | 35.0% |
| AGCTCTTTCAAACAGTCTAA+AGG | + | chr4_4:78695275-78695294 | None:intergenic | 35.0% | |
| AACAAAATGCTTATTGCCAG+TGG | - | chr4_4:78695556-78695575 | Msa0705870:five_prime_UTR | 35.0% | |
| GAGTGAGACATTGTTTATGT+CGG | + | chr4_4:78695831-78695850 | None:intergenic | 35.0% | |
| ! | GAATTAACTTGGGCTATGTT+TGG | - | chr4_4:78695858-78695877 | Msa0705870:five_prime_UTR | 35.0% |
| TGAGTGTTAAGAGTGGAACA+AGG | + | chr4_4:78689486-78689505 | None:intergenic | 40.0% | |
| TGTAGAGTGAGTGTTAAGAG+TGG | + | chr4_4:78689493-78689512 | None:intergenic | 40.0% | |
| !! | TTGGTTTGGTATGGATCTGT+TGG | - | chr4_4:78689918-78689937 | Msa0705870:intron | 40.0% |
| TTGGATCTTCTACTTCTGAG+TGG | - | chr4_4:78689937-78689956 | Msa0705870:intron | 40.0% | |
| AGAAAGTGGTTCAGCAGAAA+TGG | - | chr4_4:78690076-78690095 | Msa0705870:intron | 40.0% | |
| TCAGCAGAAATGGAAGAAGA+AGG | - | chr4_4:78690086-78690105 | Msa0705870:intron | 40.0% | |
| ! | GATGCGGTATACTCATGTTT+TGG | - | chr4_4:78690164-78690183 | Msa0705870:intron | 40.0% |
| ! | TGCGGTATACTCATGTTTTG+GGG | - | chr4_4:78690166-78690185 | Msa0705870:intron | 40.0% |
| !! | GAATAGGCTTCCTTTGGAAT+TGG | - | chr4_4:78690260-78690279 | Msa0705870:CDS | 40.0% |
| !! | GCTTCCTTTGGAATTGGTTT+GGG | - | chr4_4:78690266-78690285 | Msa0705870:CDS | 40.0% |
| ! | TGGTTTGGGATGCATTCTTT+AGG | - | chr4_4:78690280-78690299 | Msa0705870:CDS | 40.0% |
| ! | GGTTTGGGATGCATTCTTTA+GGG | - | chr4_4:78690281-78690300 | Msa0705870:CDS | 40.0% |
| TATGTGTGTGTGTGTGTACT+TGG | - | chr4_4:78690363-78690382 | Msa0705870:intron | 40.0% | |
| CTAGAGGAATATTACGAACG+AGG | + | chr4_4:78690630-78690649 | None:intergenic | 40.0% | |
| CATCAACACATCCTCAAAGA+AGG | + | chr4_4:78690657-78690676 | None:intergenic | 40.0% | |
| GTCTATGGAGTTCTATCAGA+AGG | - | chr4_4:78690878-78690897 | Msa0705870:CDS | 40.0% | |
| !! | AGATTCTAGTTCATCCCCAA+AGG | + | chr4_4:78690937-78690956 | None:intergenic | 40.0% |
| AAGGGGAGTCTCTTAACATA+TGG | + | chr4_4:78691154-78691173 | None:intergenic | 40.0% | |
| TGCTAGTTGTGGAAATGTTG+AGG | - | chr4_4:78691271-78691290 | Msa0705870:CDS | 40.0% | |
| GAAATGTTGAGGTGCAGTAA+TGG | - | chr4_4:78691282-78691301 | Msa0705870:intron | 40.0% | |
| GTTTCAAACAACGAGAGAAG+AGG | + | chr4_4:78691454-78691473 | None:intergenic | 40.0% | |
| TGTTATAGTTGACTGGGTAG+AGG | - | chr4_4:78691536-78691555 | Msa0705870:CDS | 40.0% | |
| ! | AAGCTTTATCCCACTAAGTG+GGG | + | chr4_4:78691680-78691699 | None:intergenic | 40.0% |
| ! | CAAGCTTTATCCCACTAAGT+GGG | + | chr4_4:78691681-78691700 | None:intergenic | 40.0% |
| !!! | GCTTTGTTTTCCTCTCAGAT+AGG | - | chr4_4:78692368-78692387 | Msa0705870:intron | 40.0% |
| ! | TTTTCCTCTCAGATAGGTGA+GGG | - | chr4_4:78692374-78692393 | Msa0705870:intron | 40.0% |
| TTGGTACGAAACCACATAAC+CGG | + | chr4_4:78692586-78692605 | None:intergenic | 40.0% | |
| TGATTCTTTGTGAGGACTGT+TGG | - | chr4_4:78692628-78692647 | Msa0705870:intron | 40.0% | |
| !!! | CACCAACTAGTTTTGTCGAT+AGG | - | chr4_4:78692935-78692954 | Msa0705870:intron | 40.0% |
| CACCTATCGACAAAACTAGT+TGG | + | chr4_4:78692940-78692959 | None:intergenic | 40.0% | |
| TAACTGGAGAAAAGGATCTC+AGG | - | chr4_4:78693316-78693335 | Msa0705870:intron | 40.0% | |
| ACTTGATCCCTCCAAAATTC+GGG | + | chr4_4:78693824-78693843 | None:intergenic | 40.0% | |
| GACTTGATCCCTCCAAAATT+CGG | + | chr4_4:78693825-78693844 | None:intergenic | 40.0% | |
| TGGTATACAGTTGTGGATCT+TGG | + | chr4_4:78694091-78694110 | None:intergenic | 40.0% | |
| GTTCATCTGGTATACAGTTG+TGG | + | chr4_4:78694098-78694117 | None:intergenic | 40.0% | |
| ATGCAACAGTGTTCACAGAA+AGG | + | chr4_4:78694158-78694177 | None:intergenic | 40.0% | |
| !! | ATATTTTTACGCGATCACCC+TGG | - | chr4_4:78694289-78694308 | Msa0705870:intron | 40.0% |
| ! | CGAGGTCTTTTTGCTAGATT+TGG | + | chr4_4:78694355-78694374 | None:intergenic | 40.0% |
| ATCAGTGACACATACTGCAT+GGG | - | chr4_4:78694394-78694413 | Msa0705870:intron | 40.0% | |
| AGACTGAATACCGAAGAGAA+TGG | - | chr4_4:78695035-78695054 | Msa0705870:intron | 40.0% | |
| TGCTTGTACACCATTCTCTT+CGG | + | chr4_4:78695048-78695067 | None:intergenic | 40.0% | |
| AAGAGAATGGTGTACAAGCA+AGG | - | chr4_4:78695048-78695067 | Msa0705870:intron | 40.0% | |
| AGAGAATGGTGTACAAGCAA+GGG | - | chr4_4:78695049-78695068 | Msa0705870:intron | 40.0% | |
| TCTTGCAAAAAGGAAGCAAG+TGG | + | chr4_4:78695083-78695102 | None:intergenic | 40.0% | |
| !! | TGCTTTGAGGCTTCTTAACA+TGG | - | chr4_4:78695120-78695139 | Msa0705870:CDS | 40.0% |
| CTATGTTTCATAGGCTACCT+TGG | + | chr4_4:78695356-78695375 | None:intergenic | 40.0% | |
| ! | TCTGTTGGACAGTCTGTTTT+GGG | - | chr4_4:78695517-78695536 | Msa0705870:five_prime_UTR | 40.0% |
| !!! | TTGGTGGTGGTGCTTTGTTT+TGG | - | chr4_4:78690123-78690142 | Msa0705870:intron | 45.0% |
| !!! | TGGTGGTGGTGCTTTGTTTT+GGG | - | chr4_4:78690124-78690143 | Msa0705870:intron | 45.0% |
| TGCAAGGAATAGGCTTCCTT+TGG | - | chr4_4:78690254-78690273 | Msa0705870:CDS | 45.0% | |
| !! | GGCTTCCTTTGGAATTGGTT+TGG | - | chr4_4:78690265-78690284 | Msa0705870:CDS | 45.0% |
| GCATCCCAAACCAATTCCAA+AGG | + | chr4_4:78690273-78690292 | None:intergenic | 45.0% | |
| GGTAACATCAACGCACTACT+AGG | + | chr4_4:78690530-78690549 | None:intergenic | 45.0% | |
| GCATTGTCGAGAATAGTGAG+TGG | - | chr4_4:78690687-78690706 | Msa0705870:intron | 45.0% | |
| AGAGCTTAGGTGTGTGTCTA+TGG | - | chr4_4:78690863-78690882 | Msa0705870:CDS | 45.0% | |
| ! | ATTTTCGTTCATCCTAGGCC+AGG | - | chr4_4:78691355-78691374 | Msa0705870:intron | 45.0% |
| ! | TTTTCGTTCATCCTAGGCCA+GGG | - | chr4_4:78691356-78691375 | Msa0705870:intron | 45.0% |
| TTTATCCCACTAAGTGGGGT+CGG | + | chr4_4:78691676-78691695 | None:intergenic | 45.0% | |
| ! | CCAAGCTTTATCCCACTAAG+TGG | + | chr4_4:78691682-78691701 | None:intergenic | 45.0% |
| CCACTTAGTGGGATAAAGCT+TGG | - | chr4_4:78691679-78691698 | Msa0705870:intron | 45.0% | |
| GCACACTTCAATCCAAGGAA+AGG | + | chr4_4:78691991-78692010 | None:intergenic | 45.0% | |
| TTGGAGCACACTTCAATCCA+AGG | + | chr4_4:78691996-78692015 | None:intergenic | 45.0% | |
| ! | GTTTTCCTCTCAGATAGGTG+AGG | - | chr4_4:78692373-78692392 | Msa0705870:intron | 45.0% |
| TATACCCTCACCTATCTGAG+AGG | + | chr4_4:78692381-78692400 | None:intergenic | 45.0% | |
| GACTCTTCATGGTTTCGTTC+AGG | - | chr4_4:78692458-78692477 | Msa0705870:CDS | 45.0% | |
| CTTCATGGTTTCGTTCAGGA+AGG | - | chr4_4:78692462-78692481 | Msa0705870:CDS | 45.0% | |
| GGGGCAAACTATTAGTGGTT+TGG | + | chr4_4:78692529-78692548 | None:intergenic | 45.0% | |
| ACCTACACATCAGCTTGGTT+CGG | + | chr4_4:78692555-78692574 | None:intergenic | 45.0% | |
| ACTGAACCTACACATCAGCT+TGG | + | chr4_4:78692560-78692579 | None:intergenic | 45.0% | |
| GATGTGTAGGTTCAGTGTAC+CGG | - | chr4_4:78692564-78692583 | Msa0705870:intron | 45.0% | |
| ! | GAAATGTGCTAGAGAGCGTA+AGG | + | chr4_4:78692981-78693000 | None:intergenic | 45.0% |
| TACAGCTTCGCTGACACAAA+AGG | - | chr4_4:78693251-78693270 | Msa0705870:intron | 45.0% | |
| ! | GCTTGTCTCTTTTATGCCGA+CGG | - | chr4_4:78693750-78693769 | Msa0705870:intron | 45.0% |
| TAGAATGAGACTATCGCCGT+CGG | + | chr4_4:78693769-78693788 | None:intergenic | 45.0% | |
| ! | AAAAGCCGCTACCCGAATTT+TGG | - | chr4_4:78693810-78693829 | Msa0705870:intron | 45.0% |
| GATCAGTGACACATACTGCA+TGG | - | chr4_4:78694393-78694412 | Msa0705870:intron | 45.0% | |
| GGGTTATCATACTAGGAAGC+TGG | - | chr4_4:78694582-78694601 | Msa0705870:intron | 45.0% | |
| GCAAAAAGGAAGCAAGTGGA+CGG | + | chr4_4:78695079-78695098 | None:intergenic | 45.0% | |
| !! | TTACTAGGACTGCTGCTTTG+AGG | - | chr4_4:78695107-78695126 | Msa0705870:CDS | 45.0% |
| ! | CTCTGTTGGACAGTCTGTTT+TGG | - | chr4_4:78695516-78695535 | Msa0705870:five_prime_UTR | 45.0% |
| CCTCAAAGAAGGGATGCTAG+AGG | + | chr4_4:78690646-78690665 | None:intergenic | 50.0% | |
| CCTCTAGCATCCCTTCTTTG+AGG | - | chr4_4:78690643-78690662 | Msa0705870:intron | 50.0% | |
| TTCAACACAAACCCTGGCCT+AGG | + | chr4_4:78691370-78691389 | None:intergenic | 50.0% | |
| GCCAGGGTTTGTGTTGAATG+AGG | - | chr4_4:78691372-78691391 | Msa0705870:intron | 50.0% | |
| GCCTCATTCAACACAAACCC+TGG | + | chr4_4:78691376-78691395 | None:intergenic | 50.0% | |
| GGGTGAAGCAAGCATGATAG+AGG | - | chr4_4:78692297-78692316 | Msa0705870:intron | 50.0% | |
| GGTTCGGGGCAAACTATTAG+TGG | + | chr4_4:78692534-78692553 | None:intergenic | 50.0% | |
| !! | ACATCAGCTTGGTTCGGTTC+GGG | + | chr4_4:78692549-78692568 | None:intergenic | 50.0% |
| !! | CACATCAGCTTGGTTCGGTT+CGG | + | chr4_4:78692550-78692569 | None:intergenic | 50.0% |
| ACCGAACCAAGCTGATGTGT+AGG | - | chr4_4:78692551-78692570 | Msa0705870:intron | 50.0% | |
| !! | GGTTCAGTGTACCGGTTATG+TGG | - | chr4_4:78692572-78692591 | Msa0705870:intron | 50.0% |
| AGCTTCGCTGACACAAAAGG+AGG | - | chr4_4:78693254-78693273 | Msa0705870:intron | 50.0% | |
| TCCCTCCAAAATTCGGGTAG+CGG | + | chr4_4:78693818-78693837 | None:intergenic | 50.0% | |
| AAGTCACTGGATGCCATCCA+CGG | + | chr4_4:78694448-78694467 | None:intergenic | 50.0% | |
| ACTCTGCTTGTATCAGCCAC+TGG | + | chr4_4:78695575-78695594 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4_4:78691668-78691687 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4_4:78691667-78691686 | Msa0705870:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4_4:78691668-78691687 | Msa0705870:intron | 55.0% | |
| !! | CATCAGCTTGGTTCGGTTCG+GGG | + | chr4_4:78692548-78692567 | None:intergenic | 55.0% |
| ! | AGCCGCTACCCGAATTTTGG+AGG | - | chr4_4:78693813-78693832 | Msa0705870:intron | 55.0% |
| ! | GCCGCTACCCGAATTTTGGA+GGG | - | chr4_4:78693814-78693833 | Msa0705870:intron | 55.0% |
| TCAGCAGGCTGCGCAAAGAA+AGG | + | chr4_4:78694063-78694082 | None:intergenic | 55.0% | |
| TGGATCTTGGACGTGTCAGC+AGG | + | chr4_4:78694078-78694097 | None:intergenic | 55.0% | |
| !! | GCGCTCACGATCTCTGGAGT+TGG | + | chr4_4:78694426-78694445 | None:intergenic | 60.0% |
| !! | TGCAGTGGGCTGTGCTGACC+AGG | - | chr4_4:78693452-78693471 | Msa0705870:intron | 65.0% |
| ! | TCCAGAGATCGTGAGCGCCG+TGG | - | chr4_4:78694428-78694447 | Msa0705870:intron | 65.0% |
| TCCACGGCGCTCACGATCTC+TGG | + | chr4_4:78694432-78694451 | None:intergenic | 65.0% | |
| ! | GAGATCGTGAGCGCCGTGGA+TGG | - | chr4_4:78694432-78694451 | Msa0705870:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 78689483 | 78695891 | 78689483 | ID=Msa0705870;Name=Msa0705870 |
| chr4_4 | mRNA | 78689483 | 78695891 | 78689483 | ID=Msa0705870-mRNA-1;Parent=Msa0705870;Name=Msa0705870-mRNA-1;_AED=0.16;_eAED=0.16;_QI=392|1|1|1|0.72|0.75|12|339|363 |
| chr4_4 | exon | 78689483 | 78689845 | 78689483 | ID=Msa0705870-mRNA-1:exon:25203;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78690233 | 78690361 | 78690233 | ID=Msa0705870-mRNA-1:exon:25202;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78690863 | 78691012 | 78690863 | ID=Msa0705870-mRNA-1:exon:25201;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78691234 | 78691299 | 78691234 | ID=Msa0705870-mRNA-1:exon:25200;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78691527 | 78691565 | 78691527 | ID=Msa0705870-mRNA-1:exon:25199;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78691837 | 78691917 | 78691837 | ID=Msa0705870-mRNA-1:exon:25198;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78692037 | 78692118 | 78692037 | ID=Msa0705870-mRNA-1:exon:25197;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78692418 | 78692489 | 78692418 | ID=Msa0705870-mRNA-1:exon:25196;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78692985 | 78693085 | 78692985 | ID=Msa0705870-mRNA-1:exon:25195;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78693927 | 78694040 | 78693927 | ID=Msa0705870-mRNA-1:exon:25194;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78695072 | 78695613 | 78695072 | ID=Msa0705870-mRNA-1:exon:25193;Parent=Msa0705870-mRNA-1 |
| chr4_4 | exon | 78695808 | 78695891 | 78695808 | ID=Msa0705870-mRNA-1:exon:25192;Parent=Msa0705870-mRNA-1 |
| chr4_4 | five_prime_UTR | 78695808 | 78695891 | 78695808 | ID=Msa0705870-mRNA-1:five_prime_utr;Parent=Msa0705870-mRNA-1 |
| chr4_4 | five_prime_UTR | 78695306 | 78695613 | 78695306 | ID=Msa0705870-mRNA-1:five_prime_utr;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78695072 | 78695305 | 78695072 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78693927 | 78694040 | 78693927 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78692985 | 78693085 | 78692985 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78692418 | 78692489 | 78692418 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78692037 | 78692118 | 78692037 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78691837 | 78691917 | 78691837 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78691527 | 78691565 | 78691527 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78691234 | 78691299 | 78691234 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78690863 | 78691012 | 78690863 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78690233 | 78690361 | 78690233 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | CDS | 78689822 | 78689845 | 78689822 | ID=Msa0705870-mRNA-1:cds;Parent=Msa0705870-mRNA-1 |
| chr4_4 | three_prime_UTR | 78689483 | 78689821 | 78689483 | ID=Msa0705870-mRNA-1:three_prime_utr;Parent=Msa0705870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
