AlfalfaGEDB | Msa1331280

M. sativa cultivar zhongmu-4 / Msa1331280

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1331280	XP_003608722.2	95.417	240	8	1	1	240	1	237	2.13e-156	446

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1331280	G7JIX6	95.417	240	8	1	1	240	1	237	1.02e-156	446

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0005270	Msa1331280	0.804808	1.808267e-49	-8.615850e-47
Msa0008840	Msa1331280	0.824375	8.349721e-54	-8.615850e-47
Msa0014830	Msa1331280	0.808631	2.817295e-50	-8.615850e-47
Msa0016510	Msa1331280	0.809411	1.917128e-50	-8.615850e-47
Msa0017320	Msa1331280	0.816611	5.058430e-52	-8.615850e-47
Msa0030300	Msa1331280	0.815867	7.416612e-52	-8.615850e-47
Msa0038870	Msa1331280	0.815830	7.561934e-52	-8.615850e-47
Msa0041690	Msa1331280	0.805088	1.580524e-49	-8.615850e-47
Msa0047250	Msa1331280	0.810560	1.084739e-50	-8.615850e-47
Msa0052860	Msa1331280	0.802864	4.582920e-49	-8.615850e-47
Msa0055100	Msa1331280	0.805995	1.019934e-49	-8.615850e-47
Msa0057750	Msa1331280	0.827852	1.244647e-54	-8.615850e-47
Msa0065650	Msa1331280	0.811388	7.179219e-51	-8.615850e-47
Msa0068430	Msa1331280	0.829788	4.230451e-55	-8.615850e-47
Msa0074750	Msa1331280	0.836397	9.586422e-57	-8.615850e-47
Msa0077540	Msa1331280	0.812579	3.949014e-51	-8.615850e-47
Msa0081650	Msa1331280	0.826597	2.486200e-54	-8.615850e-47
Msa0084430	Msa1331280	0.801916	7.182668e-49	-8.615850e-47
Msa0086420	Msa1331280	0.824016	1.014033e-53	-8.615850e-47
Msa0090030	Msa1331280	0.819150	1.351034e-52	-8.615850e-47
Msa0090550	Msa1331280	0.806609	7.569490e-50	-8.615850e-47
Msa0092170	Msa1331280	0.833378	5.521092e-56	-8.615850e-47
Msa0093010	Msa1331280	0.810002	1.431110e-50	-8.615850e-47
Msa0101180	Msa1331280	0.816915	4.322279e-52	-8.615850e-47
Msa0103070	Msa1331280	0.830018	3.719333e-55	-8.615850e-47
Msa0111080	Msa1331280	0.802619	5.147130e-49	-8.615850e-47
Msa0118540	Msa1331280	0.813370	2.649211e-51	-8.615850e-47
Msa0614510	Msa1331280	0.804360	2.242798e-49	-8.615850e-47
Msa0617260	Msa1331280	0.810387	1.182265e-50	-8.615850e-47
Msa0620330	Msa1331280	0.823841	1.114568e-53	-8.615850e-47
Msa0621600	Msa1331280	0.813442	2.554699e-51	-8.615850e-47
Msa0621650	Msa1331280	0.852138	5.620820e-61	-8.615850e-47
Msa0628290	Msa1331280	0.805893	1.071444e-49	-8.615850e-47
Msa0628420	Msa1331280	0.805367	1.381192e-49	-8.615850e-47
Msa0628500	Msa1331280	0.829700	4.444759e-55	-8.615850e-47
Msa0630950	Msa1331280	0.819450	1.154269e-52	-8.615850e-47
Msa0640940	Msa1331280	0.835731	1.415072e-56	-8.615850e-47
Msa0641340	Msa1331280	0.814954	1.183905e-51	-8.615850e-47
Msa0661320	Msa1331280	0.801384	9.237761e-49	-8.615850e-47
Msa0662630	Msa1331280	0.832955	7.034007e-56	-8.615850e-47
Msa0679360	Msa1331280	0.829574	4.769648e-55	-8.615850e-47
Msa0679550	Msa1331280	0.814711	1.340699e-51	-8.615850e-47
Msa0693790	Msa1331280	0.826667	2.391712e-54	-8.615850e-47
Msa0697720	Msa1331280	0.806993	6.278987e-50	-8.615850e-47
Msa0705190	Msa1331280	0.809173	2.156845e-50	-8.615850e-47
Msa0705990	Msa1331280	0.801064	1.074037e-48	-8.615850e-47
Msa0726080	Msa1331280	0.831882	1.297703e-55	-8.615850e-47
Msa0732600	Msa1331280	0.812527	4.054081e-51	-8.615850e-47
Msa0736570	Msa1331280	0.800448	1.434552e-48	-8.615850e-47
Msa0743530	Msa1331280	0.844430	7.599227e-59	-8.615850e-47
Msa0746170	Msa1331280	0.802350	5.850168e-49	-8.615850e-47
Msa0748730	Msa1331280	0.834628	2.684484e-56	-8.615850e-47
Msa0750850	Msa1331280	0.813312	2.727996e-51	-8.615850e-47
Msa0789560	Msa1331280	0.808411	3.138538e-50	-8.615850e-47
Msa0805420	Msa1331280	0.807626	4.610778e-50	-8.615850e-47
Msa0817120	Msa1331280	0.818113	2.321969e-52	-8.615850e-47
Msa0822170	Msa1331280	0.826408	2.757857e-54	-8.615850e-47
Msa0823500	Msa1331280	0.808806	2.584749e-50	-8.615850e-47
Msa0829220	Msa1331280	0.822963	1.787668e-53	-8.615850e-47
Msa0127850	Msa1331280	0.802992	4.311600e-49	-8.615850e-47
Msa0142500	Msa1331280	0.825986	3.474597e-54	-8.615850e-47
Msa0145150	Msa1331280	0.808385	3.178737e-50	-8.615850e-47
Msa0154920	Msa1331280	0.805758	1.143772e-49	-8.615850e-47
Msa0171980	Msa1331280	0.802624	5.135446e-49	-8.615850e-47
Msa0175050	Msa1331280	0.813083	3.062667e-51	-8.615850e-47
Msa0175540	Msa1331280	0.804453	2.145090e-49	-8.615850e-47
Msa0176330	Msa1331280	0.801288	9.664200e-49	-8.615850e-47
Msa0183870	Msa1331280	0.804846	1.775660e-49	-8.615850e-47
Msa0187490	Msa1331280	0.824553	7.584837e-54	-8.615850e-47
Msa0202930	Msa1331280	0.846163	2.581553e-59	-8.615850e-47
Msa0233370	Msa1331280	0.820121	8.109369e-53	-8.615850e-47
Msa1225600	Msa1331280	0.808041	3.762865e-50	-8.615850e-47
Msa1230040	Msa1331280	0.805992	1.021179e-49	-8.615850e-47
Msa1233850	Msa1331280	0.806660	7.386366e-50	-8.615850e-47
Msa1248830	Msa1331280	0.807052	6.100481e-50	-8.615850e-47
Msa1250110	Msa1331280	0.829059	6.361982e-55	-8.615850e-47
Msa1250730	Msa1331280	0.834635	2.673846e-56	-8.615850e-47
Msa1259640	Msa1331280	0.820690	6.003501e-53	-8.615850e-47
Msa1270660	Msa1331280	0.824772	6.734501e-54	-8.615850e-47
Msa1276150	Msa1331280	0.800317	1.525426e-48	-8.615850e-47
Msa1297530	Msa1331280	0.830659	2.593380e-55	-8.615850e-47
Msa1314770	Msa1331280	0.807377	5.206309e-50	-8.615850e-47
Msa1329790	Msa1331280	0.808660	2.777437e-50	-8.615850e-47
Msa1331280	Msa1331350	0.837394	5.333677e-57	-8.615850e-47
Msa1331280	Msa1336040	0.807275	5.472109e-50	-8.615850e-47
Msa1331280	Msa1339190	0.861702	8.520097e-64	-8.615850e-47
Msa1331280	Msa1340830	0.819811	9.546901e-53	-8.615850e-47
Msa1331280	Msa1344310	0.804665	1.937459e-49	-8.615850e-47
Msa1331280	Msa1363700	0.807170	5.761915e-50	-8.615850e-47
Msa1331280	Msa1370590	0.814313	1.641563e-51	-8.615850e-47
Msa1331280	Msa1371240	0.808744	2.664476e-50	-8.615850e-47
Msa1331280	Msa1372290	0.844894	5.696297e-59	-8.615850e-47
Msa1331280	Msa1384100	0.812239	4.685706e-51	-8.615850e-47
Msa1331280	Msa1396940	0.809717	1.648004e-50	-8.615850e-47
Msa1331280	Msa1400120	0.814831	1.260940e-51	-8.615850e-47
Msa1331280	Msa1411950	0.804610	1.988539e-49	-8.615850e-47
Msa1331280	Msa1416260	0.837739	4.350445e-57	-8.615850e-47
Msa1331280	Msa1426350	0.831936	1.258356e-55	-8.615850e-47
Msa1331280	Msa1426570	0.800803	1.214191e-48	-8.615850e-47
Msa1331280	Msa1428780	0.828954	6.744500e-55	-8.615850e-47
Msa1331280	Msa1442790	0.824136	9.505327e-54	-8.615850e-47
Msa1331280	Msa1444120	0.817585	3.054803e-52	-8.615850e-47
Msa1331280	Msa1446080	0.802138	6.467232e-49	-8.615850e-47
Msa1331280	Msa1448630	0.815030	1.139089e-51	-8.615850e-47
Msa1331280	Msa1458030	0.823356	1.447378e-53	-8.615850e-47
Msa1331280	Msa1463600	0.812528	4.052057e-51	-8.615850e-47
Msa0372440	Msa1331280	0.807352	5.270951e-50	-8.615850e-47
Msa0376600	Msa1331280	0.814949	1.186977e-51	-8.615850e-47
Msa0384670	Msa1331280	0.807007	6.236752e-50	-8.615850e-47
Msa0387050	Msa1331280	0.802363	5.812855e-49	-8.615850e-47
Msa0394690	Msa1331280	0.805700	1.176268e-49	-8.615850e-47
Msa0395980	Msa1331280	0.806933	6.466616e-50	-8.615850e-47
Msa0403770	Msa1331280	0.814944	1.190035e-51	-8.615850e-47
Msa0410300	Msa1331280	0.800306	1.533371e-48	-8.615850e-47
Msa0432500	Msa1331280	0.827606	1.425997e-54	-8.615850e-47
Msa0439890	Msa1331280	0.816566	5.175469e-52	-8.615850e-47
Msa0443430	Msa1331280	0.807589	4.695017e-50	-8.615850e-47
Msa0482040	Msa1331280	0.816316	5.889158e-52	-8.615850e-47
Msa0482180	Msa1331280	0.831628	1.498366e-55	-8.615850e-47
Msa0994370	Msa1331280	0.813675	2.269961e-51	-8.615850e-47
Msa1001080	Msa1331280	0.815488	9.008902e-52	-8.615850e-47
Msa1010460	Msa1331280	0.879615	1.078073e-69	-8.615850e-47
Msa1036740	Msa1331280	0.802768	4.796777e-49	-8.615850e-47
Msa1037520	Msa1331280	0.822538	2.245836e-53	-8.615850e-47
Msa1042660	Msa1331280	0.838498	2.775724e-57	-8.615850e-47
Msa1043050	Msa1331280	0.802944	4.410930e-49	-8.615850e-47
Msa1071320	Msa1331280	0.815797	7.690153e-52	-8.615850e-47
Msa1072700	Msa1331280	0.825688	4.090806e-54	-8.615850e-47
Msa1072900	Msa1331280	0.814100	1.829200e-51	-8.615850e-47
Msa1073830	Msa1331280	0.800336	1.511976e-48	-8.615850e-47
Msa1075970	Msa1331280	0.806537	7.838216e-50	-8.615850e-47
Msa1077070	Msa1331280	0.817689	2.895311e-52	-8.615850e-47
Msa1096550	Msa1331280	0.834514	2.868559e-56	-8.615850e-47
Msa0241740	Msa1331280	0.809485	1.849150e-50	-8.615850e-47
Msa0269470	Msa1331280	0.815383	9.510626e-52	-8.615850e-47
Msa0271580	Msa1331280	0.808574	2.896558e-50	-8.615850e-47
Msa0271790	Msa1331280	0.812744	3.634054e-51	-8.615850e-47
Msa0281480	Msa1331280	0.838383	2.970800e-57	-8.615850e-47
Msa0283420	Msa1331280	0.808884	2.487240e-50	-8.615850e-47
Msa0284450	Msa1331280	0.838482	2.800762e-57	-8.615850e-47
Msa0304840	Msa1331280	0.813090	3.051394e-51	-8.615850e-47
Msa0310430	Msa1331280	0.849850	2.480711e-60	-8.615850e-47
Msa0313930	Msa1331280	0.819965	8.805011e-53	-8.615850e-47
Msa0320610	Msa1331280	0.833355	5.592752e-56	-8.615850e-47
Msa0322680	Msa1331280	0.814651	1.382278e-51	-8.615850e-47
Msa0341230	Msa1331280	0.810027	1.413346e-50	-8.615850e-47
Msa0342290	Msa1331280	0.806032	1.001438e-49	-8.615850e-47
Msa0347750	Msa1331280	0.814094	1.835062e-51	-8.615850e-47
Msa0347950	Msa1331280	0.801706	7.933587e-49	-8.615850e-47
Msa0347990	Msa1331280	0.814327	1.630032e-51	-8.615850e-47
Msa1113590	Msa1331280	0.818139	2.290714e-52	-8.615850e-47
Msa1113880	Msa1331280	0.800528	1.381311e-48	-8.615850e-47
Msa1122780	Msa1331280	0.821190	4.606053e-53	-8.615850e-47
Msa1128330	Msa1331280	0.843085	1.740882e-58	-8.615850e-47
Msa1129060	Msa1331280	-0.817711	2.861418e-52	-8.615850e-47
Msa1130530	Msa1331280	0.802186	6.322262e-49	-8.615850e-47
Msa1131490	Msa1331280	0.830895	2.269009e-55	-8.615850e-47
Msa1131530	Msa1331280	0.801064	1.074057e-48	-8.615850e-47
Msa1150710	Msa1331280	0.805762	1.141684e-49	-8.615850e-47
Msa1163870	Msa1331280	0.814394	1.575584e-51	-8.615850e-47
Msa1164020	Msa1331280	0.811482	6.848402e-51	-8.615850e-47
Msa1172130	Msa1331280	-0.801479	8.829922e-49	-8.615850e-47
Msa1174310	Msa1331280	0.813665	2.281944e-51	-8.615850e-47
Msa1197070	Msa1331280	0.801354	9.369159e-49	-8.615850e-47
Msa1203880	Msa1331280	0.802028	6.811621e-49	-8.615850e-47
Msa1205480	Msa1331280	0.814852	1.247235e-51	-8.615850e-47
Msa1205590	Msa1331280	0.832465	9.309864e-56	-8.615850e-47
Msa1206650	Msa1331280	0.811590	6.487104e-51	-8.615850e-47
Msa1207310	Msa1331280	0.830005	3.746278e-55	-8.615850e-47
Msa1207350	Msa1331280	0.909342	6.334347e-82	-8.615850e-47
Msa1207730	Msa1331280	0.806929	6.477723e-50	-8.615850e-47
Msa1209670	Msa1331280	0.828792	7.382234e-55	-8.615850e-47
Msa1211340	Msa1331280	0.818956	1.495495e-52	-8.615850e-47
Msa1215920	Msa1331280	0.830739	2.478115e-55	-8.615850e-47
Msa0482940	Msa1331280	0.807254	5.529574e-50	-8.615850e-47
Msa0485490	Msa1331280	0.827413	1.586183e-54	-8.615850e-47
Msa0491000	Msa1331280	0.803347	3.640382e-49	-8.615850e-47
Msa0524600	Msa1331280	0.813946	1.978941e-51	-8.615850e-47
Msa0527740	Msa1331280	0.862633	4.414709e-64	-8.615850e-47
Msa0531250	Msa1331280	0.801476	8.845678e-49	-8.615850e-47
Msa0534410	Msa1331280	0.819673	1.026590e-52	-8.615850e-47
Msa0542560	Msa1331280	0.803987	2.681501e-49	-8.615850e-47
Msa0549780	Msa1331280	0.806833	6.789702e-50	-8.615850e-47
Msa0560500	Msa1331280	0.802518	5.400004e-49	-8.615850e-47
Msa0566350	Msa1331280	0.818444	1.953644e-52	-8.615850e-47
Msa0566750	Msa1331280	0.822660	2.103622e-53	-8.615850e-47
Msa0588120	Msa1331280	0.820356	7.161747e-53	-8.615850e-47
Msa0590650	Msa1331280	0.803341	3.651944e-49	-8.615850e-47
Msa0592180	Msa1331280	0.813871	2.055241e-51	-8.615850e-47
Msa0594200	Msa1331280	0.806087	9.753333e-50	-8.615850e-47
Msa0600450	Msa1331280	0.828895	6.969375e-55	-8.615850e-47
Msa0842770	Msa1331280	0.810399	1.175275e-50	-8.615850e-47
Msa0846230	Msa1331280	0.835127	2.010311e-56	-8.615850e-47
Msa0857300	Msa1331280	0.807456	5.011513e-50	-8.615850e-47
Msa0861470	Msa1331280	0.822535	2.248866e-53	-8.615850e-47
Msa0861570	Msa1331280	0.815805	7.660375e-52	-8.615850e-47
Msa0862500	Msa1331280	0.809403	1.925498e-50	-8.615850e-47
Msa0866400	Msa1331280	0.819309	1.242504e-52	-8.615850e-47
Msa0866410	Msa1331280	0.800933	1.142286e-48	-8.615850e-47
Msa0879860	Msa1331280	0.811176	7.980254e-51	-8.615850e-47
Msa0924150	Msa1331280	-0.830115	3.522665e-55	-8.615850e-47
Msa0943270	Msa1331280	0.828284	9.791854e-55	-8.615850e-47
Msa0963090	Msa1331280	-0.826543	2.561250e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1331280	MtrunA17_Chr4g0056251	95.417	240	8	1	1	240	1	237	1.96e-160	446

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1331280	AT4G16535.1	52.284	197	62	6	1	173	1	189	2.54e-42	147

Find 98 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGCAATGCATTGTATTTA+AGG	0.088911	8_4:-50803292	None:intergenic
CCAGCTTTGTCTTCGATTTC+AGG	0.096847	8_4:-50799244	None:intergenic
TTGGCTTCAGGTTCGGATTC+AGG	0.217050	8_4:-50799202	None:intergenic
TCAGGTTCAGCTTCGGATTT+AGG	0.235032	8_4:-50799226	None:intergenic
TCCCAATTCATTCCCGTATT+AGG	0.248807	8_4:+50798951	Msa1331280:five_prime_UTR
AAATTAGGTTATGGTGTTAC+TGG	0.266784	8_4:+50799442	Msa1331280:CDS
TTTAAGTCCTTATAATATTA+TGG	0.277475	8_4:+50803052	Msa1331280:three_prime_UTR
GCGTTTAAGCTGTTCTTCTT+TGG	0.295938	8_4:-50799098	None:intergenic
AATTTATATTTCTCATCTTC+CGG	0.307288	8_4:-50799424	None:intergenic
TTAACTTGTTATTTCTGGTT+TGG	0.309695	8_4:+50803124	Msa1331280:three_prime_UTR
TCGGATTTAGGTTTGGCTTC+AGG	0.317601	8_4:-50799214	None:intergenic
GAAGATGAGAAATATAAATT+AGG	0.320007	8_4:+50799427	Msa1331280:CDS
CACCTAATACGGGAATGAAT+TGG	0.321776	8_4:-50798953	None:intergenic
TGATAGACCATAATATTATA+AGG	0.337275	8_4:-50803059	None:intergenic
CTCGACGACTTTGTTCCTTC+GGG	0.345048	8_4:-50799663	None:intergenic
TTTACGATTTGCACCTAATA+CGG	0.347356	8_4:-50798964	None:intergenic
TGAGGGAAGAGAGGTTGAAA+AGG	0.347869	8_4:+50799599	Msa1331280:CDS
ATTATGATCTTGTGAAATAC+AGG	0.363104	8_4:+50802987	Msa1331280:three_prime_UTR
GTGGAAATGGCGGTGGTGAT+AGG	0.377614	8_4:+50799542	Msa1331280:CDS
TCTCGACGACTTTGTTCCTT+CGG	0.381444	8_4:-50799664	None:intergenic
TTCAGCTTCGGATTTAGGTT+TGG	0.396686	8_4:-50799221	None:intergenic
GAGAAATATAAATTAGGTTA+TGG	0.398827	8_4:+50799433	Msa1331280:CDS
AATGATGAAGTTGGTTTGAA+AGG	0.399267	8_4:+50803233	Msa1331280:three_prime_UTR
GATTCAGGTGGCGGAATTGT+TGG	0.406824	8_4:-50799187	None:intergenic
TTTAGGTTTGGCTTCAGGTT+CGG	0.412446	8_4:-50799209	None:intergenic
ACCTAATACGGGAATGAATT+GGG	0.422941	8_4:-50798952	None:intergenic
GAAGACATTGGAAGAGTTGA+GGG	0.423090	8_4:+50799582	Msa1331280:CDS
TTCGATTTCAGGTTCAGCTT+CGG	0.423173	8_4:-50799233	None:intergenic
GGTGAGACTGTTCGTGCTGT+TGG	0.427915	8_4:+50799400	Msa1331280:CDS
TGAAGAGTGAAGGATTGAAA+AGG	0.429397	8_4:-50798924	None:intergenic
CGGCGGCTTCTTCGTCTTTG+CGG	0.430480	8_4:-50799075	None:intergenic
GAGGGAAGAGAGGTTGAAAA+GGG	0.431550	8_4:+50799600	Msa1331280:CDS
CTTCAGAACCCGAGGAAGCT+TGG	0.432788	8_4:-50802961	None:intergenic
TTCAGAACCCGAGGAAGCTT+GGG	0.435286	8_4:-50802960	None:intergenic
GTTATGGTGTTACTGGGAAA+GGG	0.435823	8_4:+50799449	Msa1331280:CDS
GAAGAGTGAAGGATTGAAAA+GGG	0.445563	8_4:-50798923	None:intergenic
ACTCCGTGTTGCTAAAGGTT+TGG	0.452719	8_4:+50799162	Msa1331280:CDS
TACAGGGTTGGTTTGAGAGC+TGG	0.453699	8_4:+50803004	Msa1331280:three_prime_UTR
GAACAACTCCGTGTTGCTAA+AGG	0.455180	8_4:+50799157	Msa1331280:CDS
AAATGGCGGTGGTGATAGGA+AGG	0.455956	8_4:+50799546	Msa1331280:CDS
GGTGGTGATGATAGTGGAAA+TGG	0.457533	8_4:+50799529	Msa1331280:CDS
TGGAAGAGTTGAGGGAAGAG+AGG	0.459509	8_4:+50799590	Msa1331280:CDS
TTCTCAAGAGCGAAGCTAGC+AGG	0.467459	8_4:-50802907	None:intergenic
GGGAGAAGAAAGAGAAGGAG+AGG	0.475130	8_4:+50799620	Msa1331280:CDS
GGTCATATTAATTTATTCAA+AGG	0.480959	8_4:+50799274	Msa1331280:CDS
GTTGGTGGTGGTGATGATAG+TGG	0.488374	8_4:+50799523	Msa1331280:CDS
TTGGGAAATTTGAAGAGTGA+AGG	0.489286	8_4:-50798934	None:intergenic
GAGTTTCTTAAAGCTTGTAC+CGG	0.490464	8_4:+50803146	Msa1331280:three_prime_UTR
GGTTATGGTGTTACTGGGAA+AGG	0.492772	8_4:+50799448	Msa1331280:CDS
GGAAAGGGGTTGAATTGCCT+TGG	0.495018	8_4:+50799464	Msa1331280:CDS
ACAGGAGATGATTGTGTCAA+GGG	0.495840	8_4:+50802838	Msa1331280:intron
TTACGATTTGCACCTAATAC+GGG	0.501964	8_4:-50798963	None:intergenic
AGAAGACATTGGAAGAGTTG+AGG	0.503007	8_4:+50799581	Msa1331280:CDS
TCAGGTTCGGATTCAGGTGG+CGG	0.508733	8_4:-50799196	None:intergenic
TGAGAAAAGGAAGAAGACAT+TGG	0.509644	8_4:+50799570	Msa1331280:CDS
ATTATAAGAAGTTGAAGATG+AGG	0.510408	8_4:+50799368	Msa1331280:CDS
GACTGTTCGTGCTGTTGGAC+CGG	0.511227	8_4:+50799405	Msa1331280:CDS
TTTAAGCTGTTCTTCTTTGG+CGG	0.512755	8_4:-50799095	None:intergenic
GGAGAAGAAAGAGAAGGAGA+GGG	0.514567	8_4:+50799621	Msa1331280:CDS
CGCGTTGAGGCGGCACCCGA+AGG	0.520317	8_4:+50799648	Msa1331280:CDS
AATTAGGTTATGGTGTTACT+GGG	0.521946	8_4:+50799443	Msa1331280:CDS
GTGATAGGAAGGGTGAGAAA+AGG	0.525813	8_4:+50799557	Msa1331280:CDS
TGTTCAGTATTCAATTCTCC+CGG	0.531982	8_4:-50803165	None:intergenic
TTATGGTGTTACTGGGAAAG+GGG	0.532053	8_4:+50799450	Msa1331280:CDS
GAGTTGTTCAAGACGGACTT+CGG	0.535233	8_4:-50799143	None:intergenic
TACAGGAGATGATTGTGTCA+AGG	0.535492	8_4:+50802837	Msa1331280:intron
GAAGACAAAGCTGGTGATGT+AGG	0.541300	8_4:+50799253	Msa1331280:CDS
AGAGGGAGAGCGCGTTGAGG+CGG	0.541476	8_4:+50799638	Msa1331280:CDS
ATGTGAGGAAGGGAAAATCC+TGG	0.545616	8_4:-50802878	None:intergenic
GCAGGATTCCCATGTGAGGA+AGG	0.547204	8_4:-50802889	None:intergenic
AAGCTGTTCTTCTTTGGCGG+CGG	0.548709	8_4:-50799092	None:intergenic
TTGAAGATGAGGAAAGAGCC+TGG	0.554510	8_4:+50799379	Msa1331280:CDS
CCTGAAATCGAAGACAAAGC+TGG	0.567627	8_4:+50799244	Msa1331280:CDS
GATCTTGTGAAATACAGGGT+TGG	0.574727	8_4:+50802992	Msa1331280:three_prime_UTR
TTCAATCATGATGATGATGT+TGG	0.581965	8_4:+50799505	Msa1331280:CDS
GAAAAGGGAGAAGAAAGAGA+AGG	0.585811	8_4:+50799615	Msa1331280:CDS
TTTGGAAGAAGGAGAAATGA+TGG	0.589819	8_4:+50800442	Msa1331280:intron
TGTGAGGAAGGGAAAATCCT+GGG	0.592142	8_4:-50802877	None:intergenic
TTGCAAGTGATAGATACTAC+AGG	0.596940	8_4:+50799692	Msa1331280:CDS
AGTTTCTTAAAGCTTGTACC+GGG	0.597020	8_4:+50803147	Msa1331280:three_prime_UTR
GATGATAGTGGAAATGGCGG+TGG	0.598350	8_4:+50799535	Msa1331280:CDS
CAGGATTCCCATGTGAGGAA+GGG	0.606107	8_4:-50802888	None:intergenic
GAAATGATGGTCTGTTTGCA+AGG	0.612101	8_4:+50800455	Msa1331280:CDS
ATCAAAGTTATGAACTGAGG+CGG	0.617808	8_4:-50803030	None:intergenic
GCTTCAGGTTCGGATTCAGG+TGG	0.624243	8_4:-50799199	None:intergenic
TATCACAAAGTAGCTGCGAT+CGG	0.628041	8_4:-50803261	None:intergenic
AGGAGAGGGAGAGCGCGTTG+AGG	0.631891	8_4:+50799635	Msa1331280:CDS
TTATGATCTTGTGAAATACA+GGG	0.632607	8_4:+50802988	Msa1331280:three_prime_UTR
CATGATGATGATGTTGGTGG+TGG	0.633072	8_4:+50799511	Msa1331280:CDS
GGTGATGATAGTGGAAATGG+CGG	0.634674	8_4:+50799532	Msa1331280:CDS
GTGCCAAACCTTTAGCAACA+CGG	0.641531	8_4:-50799165	None:intergenic
ACAGCACGAACAGTCTCACC+AGG	0.646246	8_4:-50799397	None:intergenic
AATCATGATGATGATGTTGG+TGG	0.651666	8_4:+50799508	Msa1331280:CDS
ATAATATTCTTCAGAACCCG+AGG	0.656936	8_4:-50802969	None:intergenic
TAAATCAAAGTTATGAACTG+AGG	0.660323	8_4:-50803033	None:intergenic
CAACACGGAGTTGTTCAAGA+CGG	0.674484	8_4:-50799150	None:intergenic
AATGGCGGTGGTGATAGGAA+GGG	0.674692	8_4:+50799547	Msa1331280:CDS
GCTAGCAGGATTCCCATGTG+AGG	0.707193	8_4:-50802893	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTACATTCAATTAATTAATT+TGG	+	chr8_4:50800643-50800662	Msa1331280:intron	10.0%
!!!	AATTTTGATAGAATTAATTT+TGG	+	chr8_4:50801604-50801623	Msa1331280:intron	10.0%
!!!	TGTTTTGTTTTCATATATAT+AGG	+	chr8_4:50799862-50799881	Msa1331280:intron	15.0%
!!	CTAATTACAAAATTAAACTA+CGG	-	chr8_4:50800076-50800095	None:intergenic	15.0%
!!	TTCTATAAATAATCATCAAA+GGG	-	chr8_4:50800210-50800229	None:intergenic	15.0%
!!!	GTTTAGAATATTTAAATACT+AGG	+	chr8_4:50800321-50800340	Msa1331280:intron	15.0%
!!!	CTTTTTTCTTTTTTTCTTTT+CGG	+	chr8_4:50800792-50800811	Msa1331280:intron	15.0%
!!	CAAAAAATAAAATCGTATAA+AGG	-	chr8_4:50801253-50801272	None:intergenic	15.0%
!!	TAATAAAAATGATAAGATGT+TGG	+	chr8_4:50802703-50802722	Msa1331280:intron	15.0%
!!	TTTAAGTCCTTATAATATTA+TGG	+	chr8_4:50803052-50803071	Msa1331280:three_prime_UTR	15.0%
!!!	TTTTTTTAACTTGTTATTTC+TGG	+	chr8_4:50803119-50803138	Msa1331280:three_prime_UTR	15.0%
!!!	AAATGATTTTTTCATATACA+AGG	-	chr8_4:50803206-50803225	None:intergenic	15.0%
!!	ATCGTAAAATAATCGAAAAA+TGG	+	chr8_4:50798979-50798998	Msa1331280:exon	20.0%
!!	TCGTAAAATAATCGAAAAAT+GGG	+	chr8_4:50798980-50798999	Msa1331280:exon	20.0%
!!	GGTCATATTAATTTATTCAA+AGG	+	chr8_4:50799274-50799293	Msa1331280:CDS	20.0%
!!	AATTTATATTTCTCATCTTC+CGG	-	chr8_4:50799427-50799446	None:intergenic	20.0%
!!	GAAGATGAGAAATATAAATT+AGG	+	chr8_4:50799427-50799446	Msa1331280:CDS	20.0%
!!	GAGAAATATAAATTAGGTTA+TGG	+	chr8_4:50799433-50799452	Msa1331280:CDS	20.0%
!!	AAGTCATTCATTATAGTTTA+TGG	+	chr8_4:50799734-50799753	Msa1331280:intron	20.0%
!!	TCATAAAGTATGATTTATTC+TGG	+	chr8_4:50800015-50800034	Msa1331280:intron	20.0%
!!	CTTCTATAAATAATCATCAA+AGG	-	chr8_4:50800211-50800230	None:intergenic	20.0%
!!	TACAAAAACACTTTCAAATA+GGG	-	chr8_4:50800879-50800898	None:intergenic	20.0%
!!	TCTTCGTATTAGATAAATAT+GGG	-	chr8_4:50801011-50801030	None:intergenic	20.0%
!!	TTCTTCGTATTAGATAAATA+TGG	-	chr8_4:50801012-50801031	None:intergenic	20.0%
!!	AAAAAAAAAAGAAGGAAGAA+AGG	-	chr8_4:50801079-50801098	None:intergenic	20.0%
!!	TTGGAAGAAAAAAAAAAAGA+AGG	-	chr8_4:50801087-50801106	None:intergenic	20.0%
!!!	TTTTGAAATCGTTGTATAAT+TGG	+	chr8_4:50801268-50801287	Msa1331280:intron	20.0%
!!	ACGTATTAAGAAATTAAGAA+AGG	+	chr8_4:50801959-50801978	Msa1331280:intron	20.0%
!!	TAAAACAAATATCTTCAACT+TGG	-	chr8_4:50802312-50802331	None:intergenic	20.0%
!!!	TAACAAGATTTTGTAGTAAA+AGG	+	chr8_4:50802412-50802431	Msa1331280:intron	20.0%
!!!	CAGTTTTTTGTATTAATGTT+AGG	+	chr8_4:50802492-50802511	Msa1331280:intron	20.0%
!!	TGATAGACCATAATATTATA+AGG	-	chr8_4:50803062-50803081	None:intergenic	20.0%
!!!	ATTAACTCTTCATTTTCATT+AGG	-	chr8_4:50803094-50803113	None:intergenic	20.0%
!!!	TTTTATTAGAATGATGAAGT+TGG	+	chr8_4:50803224-50803243	Msa1331280:three_prime_UTR	20.0%
!	TAAAATAATCGAAAAATGGG+TGG	+	chr8_4:50798983-50799002	Msa1331280:exon	25.0%
!	ATTATAAGAAGTTGAAGATG+AGG	+	chr8_4:50799368-50799387	Msa1331280:CDS	25.0%
!!	AATATGTTTGAGTTCTAACT+TGG	+	chr8_4:50799904-50799923	Msa1331280:intron	25.0%
!!!	AACTAGTTCTATTGCTTATT+AGG	+	chr8_4:50799943-50799962	Msa1331280:intron	25.0%
!	TTCTTATATATGTGTGATGT+TGG	+	chr8_4:50799971-50799990	Msa1331280:intron	25.0%
!	GCTAAATTTCCATAATTAAC+TGG	-	chr8_4:50800186-50800205	None:intergenic	25.0%
!	GAAAGACTTGCATTTAAAAA+TGG	-	chr8_4:50800374-50800393	None:intergenic	25.0%
!	GTAGTTATTCGTGAATTATA+TGG	+	chr8_4:50800406-50800425	Msa1331280:intron	25.0%
!!	GTTTTCAAATGAGAATGAAT+TGG	+	chr8_4:50800482-50800501	Msa1331280:CDS	25.0%
!	AGCTATTTATAAAGAATGTC+AGG	-	chr8_4:50800750-50800769	None:intergenic	25.0%
!!!	TTCTTTTTTTCTTTTCGGTT+AGG	+	chr8_4:50800797-50800816	Msa1331280:intron	25.0%
!	CTACAAAAACACTTTCAAAT+AGG	-	chr8_4:50800880-50800899	None:intergenic	25.0%
!!	AATGCATTGAAGATAGATTT+TGG	-	chr8_4:50800977-50800996	None:intergenic	25.0%
!	TTCGTATTAGATAAATATGG+GGG	-	chr8_4:50801009-50801028	None:intergenic	25.0%
!	CTTCGTATTAGATAAATATG+GGG	-	chr8_4:50801010-50801029	None:intergenic	25.0%
!!	AATTGATTCTACTTGAAACT+AGG	-	chr8_4:50801741-50801760	None:intergenic	25.0%
!!!	GTAGAATTGACTTTTATGTT+TGG	-	chr8_4:50801794-50801813	None:intergenic	25.0%
!!!	TATTTCATGTGCACTTTTTT+TGG	-	chr8_4:50801880-50801899	None:intergenic	25.0%
!	AAGGAAATGACAAAAGATAA+AGG	+	chr8_4:50801911-50801930	Msa1331280:intron	25.0%
!	AAATTAAGAAAGGTGAATGT+AGG	+	chr8_4:50801969-50801988	Msa1331280:intron	25.0%
!	AATTAAGAAAGGTGAATGTA+GGG	+	chr8_4:50801970-50801989	Msa1331280:intron	25.0%
!	AGTGCAACATTATATAATCA+GGG	+	chr8_4:50802117-50802136	Msa1331280:intron	25.0%
!	GTGTAAATATTAATAGACCA+GGG	+	chr8_4:50802171-50802190	Msa1331280:intron	25.0%
!	TGTAAATATTAATAGACCAG+GGG	+	chr8_4:50802172-50802191	Msa1331280:intron	25.0%
!!	ATCTTGTTATAGACTTCAAA+AGG	-	chr8_4:50802401-50802420	None:intergenic	25.0%
!	TTATCAAATGTCTCTTAATG+CGG	+	chr8_4:50802455-50802474	Msa1331280:intron	25.0%
!	ACATTAATACAAAAAACTGC+TGG	-	chr8_4:50802491-50802510	None:intergenic	25.0%
!	TTCTATTACTCCTCTTATTA+GGG	-	chr8_4:50802681-50802700	None:intergenic	25.0%
!	GAGTATATTCATTACTTTAC+AGG	+	chr8_4:50802820-50802839	Msa1331280:intron	25.0%
!	ATTATGATCTTGTGAAATAC+AGG	+	chr8_4:50802987-50803006	Msa1331280:three_prime_UTR	25.0%
!	TTATGATCTTGTGAAATACA+GGG	+	chr8_4:50802988-50803007	Msa1331280:three_prime_UTR	25.0%
!	TAAATCAAAGTTATGAACTG+AGG	-	chr8_4:50803036-50803055	None:intergenic	25.0%
!!!	TTAACTTGTTATTTCTGGTT+TGG	+	chr8_4:50803124-50803143	Msa1331280:three_prime_UTR	25.0%
!	AATGCAATGCATTGTATTTA+AGG	-	chr8_4:50803295-50803314	None:intergenic	25.0%
	TTTACGATTTGCACCTAATA+CGG	-	chr8_4:50798967-50798986	None:intergenic	30.0%
!	TCATCAACAATCTCTCTTTT+CGG	-	chr8_4:50799328-50799347	None:intergenic	30.0%
!	AGAGATTGTTGATGAAAAAG+AGG	+	chr8_4:50799333-50799352	Msa1331280:CDS	30.0%
!!	AAATTAGGTTATGGTGTTAC+TGG	+	chr8_4:50799442-50799461	Msa1331280:CDS	30.0%
!!	AATTAGGTTATGGTGTTACT+GGG	+	chr8_4:50799443-50799462	Msa1331280:CDS	30.0%
!	TTCTTCTTTTGAACATACCA+AGG	-	chr8_4:50799484-50799503	None:intergenic	30.0%
!	TTCAATCATGATGATGATGT+TGG	+	chr8_4:50799505-50799524	Msa1331280:CDS	30.0%
	ATATGTGTGATGTTGGAAAT+AGG	+	chr8_4:50799978-50799997	Msa1331280:intron	30.0%
!!	TATGATTTATTCTGGTTCAG+AGG	+	chr8_4:50800023-50800042	Msa1331280:intron	30.0%
	GGTGTATTAGAAACTTGTAA+GGG	-	chr8_4:50800141-50800160	None:intergenic	30.0%
	TGGTGTATTAGAAACTTGTA+AGG	-	chr8_4:50800142-50800161	None:intergenic	30.0%
	ATAATTAACTGGACTACACA+AGG	-	chr8_4:50800175-50800194	None:intergenic	30.0%
	TTGTGTAGTCCAGTTAATTA+TGG	+	chr8_4:50800174-50800193	Msa1331280:intron	30.0%
	AAACACGCATTTAAACTCAA+CGG	-	chr8_4:50800237-50800256	None:intergenic	30.0%
	TTAAATGCGTGTTTGTGATA+CGG	+	chr8_4:50800243-50800262	Msa1331280:intron	30.0%
	CTAATATCACTGTGTAGATA+TGG	+	chr8_4:50800587-50800606	Msa1331280:intron	30.0%
!	CATTGAAGATAGATTTTGGA+GGG	-	chr8_4:50800973-50800992	None:intergenic	30.0%
	ATCTATCTTCAATGCATTGT+TGG	+	chr8_4:50800979-50800998	Msa1331280:intron	30.0%
	AAGAAAGGTAAAGAGAAGAA+AGG	-	chr8_4:50801064-50801083	None:intergenic	30.0%
	TCAAAGAAACTAAGTGTGTT+TGG	+	chr8_4:50801562-50801581	Msa1331280:intron	30.0%
	GTGTTATCTTAGTGTACATT+TGG	-	chr8_4:50801853-50801872	None:intergenic	30.0%
	GAGTGCAACATTATATAATC+AGG	+	chr8_4:50802116-50802135	Msa1331280:intron	30.0%
	GTGCAACATTATATAATCAG+GGG	+	chr8_4:50802118-50802137	Msa1331280:intron	30.0%
	TGCAACATTATATAATCAGG+GGG	+	chr8_4:50802119-50802138	Msa1331280:intron	30.0%
!!	TGCAGTTTTTGAAAGATTGT+AGG	+	chr8_4:50802149-50802168	Msa1331280:intron	30.0%
	GGTGTAAATATTAATAGACC+AGG	+	chr8_4:50802170-50802189	Msa1331280:intron	30.0%
	GTAAATATTAATAGACCAGG+GGG	+	chr8_4:50802173-50802192	Msa1331280:intron	30.0%
	TAAATATTAATAGACCAGGG+GGG	+	chr8_4:50802174-50802193	Msa1331280:intron	30.0%
	TGTAGTAAAAGGATTGTGTT+AGG	+	chr8_4:50802423-50802442	Msa1331280:intron	30.0%
	TAATTGCTTAGTCTATCACT+AGG	-	chr8_4:50802614-50802633	None:intergenic	30.0%
	CTTCTATTACTCCTCTTATT+AGG	-	chr8_4:50802682-50802701	None:intergenic	30.0%
!!!	TTTTTCGAGTATCATCAATC+TGG	-	chr8_4:50802731-50802750	None:intergenic	30.0%
!!	AATGATGAAGTTGGTTTGAA+AGG	+	chr8_4:50803233-50803252	Msa1331280:three_prime_UTR	30.0%
	GAAGAGTGAAGGATTGAAAA+GGG	-	chr8_4:50798926-50798945	None:intergenic	35.0%
	TGAAGAGTGAAGGATTGAAA+AGG	-	chr8_4:50798927-50798946	None:intergenic	35.0%
	TTGGGAAATTTGAAGAGTGA+AGG	-	chr8_4:50798937-50798956	None:intergenic	35.0%
	ACCTAATACGGGAATGAATT+GGG	-	chr8_4:50798955-50798974	None:intergenic	35.0%
	TTACGATTTGCACCTAATAC+GGG	-	chr8_4:50798966-50798985	None:intergenic	35.0%
!	AAACGTTCCAACGTTTTTGA+GGG	-	chr8_4:50799030-50799049	None:intergenic	35.0%
!	TAAACGTTCCAACGTTTTTG+AGG	-	chr8_4:50799031-50799050	None:intergenic	35.0%
	TTTAAGCTGTTCTTCTTTGG+CGG	-	chr8_4:50799098-50799117	None:intergenic	35.0%
!	AATCATGATGATGATGTTGG+TGG	+	chr8_4:50799508-50799527	Msa1331280:CDS	35.0%
	TGAGAAAAGGAAGAAGACAT+TGG	+	chr8_4:50799570-50799589	Msa1331280:CDS	35.0%
	TTGCAAGTGATAGATACTAC+AGG	+	chr8_4:50799692-50799711	Msa1331280:CDS	35.0%
	ACTGCTAAGATATGTGATGT+TGG	+	chr8_4:50799789-50799808	Msa1331280:intron	35.0%
	GTTCAATAGTCTAGCTATGA+GGG	+	chr8_4:50799811-50799830	Msa1331280:intron	35.0%
	TTCAATAGTCTAGCTATGAG+GGG	+	chr8_4:50799812-50799831	Msa1331280:intron	35.0%
!	CAAGTCTTTCTGAGAAATGA+TGG	+	chr8_4:50800384-50800403	Msa1331280:intron	35.0%
!!	TATGGATGTTTTGCTGTGTT+TGG	+	chr8_4:50800424-50800443	Msa1331280:intron	35.0%
	TTTGGAAGAAGGAGAAATGA+TGG	+	chr8_4:50800442-50800461	Msa1331280:intron	35.0%
!	GCATTGAAGATAGATTTTGG+AGG	-	chr8_4:50800974-50800993	None:intergenic	35.0%
	AAAAAAATCCCCCTTCAAGT+TGG	+	chr8_4:50801030-50801049	Msa1331280:intron	35.0%
!	AAAAAATCCCCCTTCAAGTT+GGG	+	chr8_4:50801031-50801050	Msa1331280:intron	35.0%
	TGATCATCACTTTATCTCAG+TGG	+	chr8_4:50801432-50801451	Msa1331280:intron	35.0%
	AAATTTCACAACTTCCCCAA+TGG	+	chr8_4:50801457-50801476	Msa1331280:intron	35.0%
	ATCCCAAAAATGAAGCCATT+GGG	-	chr8_4:50801475-50801494	None:intergenic	35.0%
	CAATTATAATCCCTCCAAAG+TGG	+	chr8_4:50801825-50801844	Msa1331280:intron	35.0%
	AAATATTAATAGACCAGGGG+GGG	+	chr8_4:50802175-50802194	Msa1331280:intron	35.0%
	CAATAAAATAGTGGCCAGTA+TGG	-	chr8_4:50802254-50802273	None:intergenic	35.0%
	GAACGACTGCAATAAAATAG+TGG	-	chr8_4:50802263-50802282	None:intergenic	35.0%
!	TACAAAAAACTGCTGGTTAG+TGG	-	chr8_4:50802484-50802503	None:intergenic	35.0%
	TTTCTACTTGCCCTAATAAG+AGG	+	chr8_4:50802668-50802687	Msa1331280:intron	35.0%
	ATAATATTCTTCAGAACCCG+AGG	-	chr8_4:50802972-50802991	None:intergenic	35.0%
	ATCAAAGTTATGAACTGAGG+CGG	-	chr8_4:50803033-50803052	None:intergenic	35.0%
	GAGTTTCTTAAAGCTTGTAC+CGG	+	chr8_4:50803146-50803165	Msa1331280:three_prime_UTR	35.0%
	AGTTTCTTAAAGCTTGTACC+GGG	+	chr8_4:50803147-50803166	Msa1331280:three_prime_UTR	35.0%
	TGTTCAGTATTCAATTCTCC+CGG	-	chr8_4:50803168-50803187	None:intergenic	35.0%
	TCCCAATTCATTCCCGTATT+AGG	+	chr8_4:50798951-50798970	Msa1331280:five_prime_UTR	40.0%
	CACCTAATACGGGAATGAAT+TGG	-	chr8_4:50798956-50798975	None:intergenic	40.0%
	AATCGAAAAATGGGTGGACA+TGG	+	chr8_4:50798989-50799008	Msa1331280:exon	40.0%
	ACATTCTCCCTCAAAAACGT+TGG	+	chr8_4:50799020-50799039	Msa1331280:CDS	40.0%
	GCGTTTAAGCTGTTCTTCTT+TGG	-	chr8_4:50799101-50799120	None:intergenic	40.0%
!	TTTAGGTTTGGCTTCAGGTT+CGG	-	chr8_4:50799212-50799231	None:intergenic	40.0%
!	TTCAGCTTCGGATTTAGGTT+TGG	-	chr8_4:50799224-50799243	None:intergenic	40.0%
!!	TTCGATTTCAGGTTCAGCTT+CGG	-	chr8_4:50799236-50799255	None:intergenic	40.0%
!	TCTCTTTTCGGTACACGAAT+CGG	-	chr8_4:50799316-50799335	None:intergenic	40.0%
!!	GTTATGGTGTTACTGGGAAA+GGG	+	chr8_4:50799449-50799468	Msa1331280:CDS	40.0%
!!	TTATGGTGTTACTGGGAAAG+GGG	+	chr8_4:50799450-50799469	Msa1331280:CDS	40.0%
	AGAAGACATTGGAAGAGTTG+AGG	+	chr8_4:50799581-50799600	Msa1331280:CDS	40.0%
	GAAGACATTGGAAGAGTTGA+GGG	+	chr8_4:50799582-50799601	Msa1331280:CDS	40.0%
	GAAAAGGGAGAAGAAAGAGA+AGG	+	chr8_4:50799615-50799634	Msa1331280:CDS	40.0%
	GGTTCAATAGTCTAGCTATG+AGG	+	chr8_4:50799810-50799829	Msa1331280:intron	40.0%
	ACGGACAGCTTAAAGTTGAA+TGG	-	chr8_4:50800057-50800076	None:intergenic	40.0%
!!	GTTTTGCTGTGTTTGGAAGA+AGG	+	chr8_4:50800431-50800450	Msa1331280:intron	40.0%
	GAAATGATGGTCTGTTTGCA+AGG	+	chr8_4:50800455-50800474	Msa1331280:CDS	40.0%
	TTTGGAAAACCTACACGAGA+AGG	+	chr8_4:50800661-50800680	Msa1331280:intron	40.0%
	TTGGAAAACCTACACGAGAA+GGG	+	chr8_4:50800662-50800681	Msa1331280:intron	40.0%
	TTAGGCTCTGTTTGAGAGTT+TGG	+	chr8_4:50800815-50800834	Msa1331280:intron	40.0%
	AGTTTAGGAAGAGAGAGCTT+TGG	-	chr8_4:50801106-50801125	None:intergenic	40.0%
	ACTGACTAAAGCTCCATTTG+GGG	-	chr8_4:50801129-50801148	None:intergenic	40.0%
!	CACTGACTAAAGCTCCATTT+GGG	-	chr8_4:50801130-50801149	None:intergenic	40.0%
!	TTCCCCAATGGCTTCATTTT+TGG	+	chr8_4:50801469-50801488	Msa1331280:intron	40.0%
!!	TCCCCAATGGCTTCATTTTT+GGG	+	chr8_4:50801470-50801489	Msa1331280:intron	40.0%
	TCCCAAAAATGAAGCCATTG+GGG	-	chr8_4:50801474-50801493	None:intergenic	40.0%
	GATCCCAAAAATGAAGCCAT+TGG	-	chr8_4:50801476-50801495	None:intergenic	40.0%
	ACTAAGTGTGTTTGGTTGTG+CGG	+	chr8_4:50801570-50801589	Msa1331280:intron	40.0%
!	ACATTTGGTTCCACTTTGGA+GGG	-	chr8_4:50801838-50801857	None:intergenic	40.0%
!	TACATTTGGTTCCACTTTGG+AGG	-	chr8_4:50801839-50801858	None:intergenic	40.0%
!	GTGTACATTTGGTTCCACTT+TGG	-	chr8_4:50801842-50801861	None:intergenic	40.0%
!!	GTTATAGTTTTACTGCAGCG+TGG	+	chr8_4:50802527-50802546	Msa1331280:intron	40.0%
	CATGTCAATCAAGACAAAGC+TGG	+	chr8_4:50802644-50802663	Msa1331280:intron	40.0%
	TACAGGAGATGATTGTGTCA+AGG	+	chr8_4:50802837-50802856	Msa1331280:intron	40.0%
	ACAGGAGATGATTGTGTCAA+GGG	+	chr8_4:50802838-50802857	Msa1331280:intron	40.0%
	GATCTTGTGAAATACAGGGT+TGG	+	chr8_4:50802992-50803011	Msa1331280:three_prime_UTR	40.0%
	TATCACAAAGTAGCTGCGAT+CGG	-	chr8_4:50803264-50803283	None:intergenic	40.0%
!	GAGTTGTTCAAGACGGACTT+CGG	-	chr8_4:50799146-50799165	None:intergenic	45.0%
	CAACACGGAGTTGTTCAAGA+CGG	-	chr8_4:50799153-50799172	None:intergenic	45.0%
!	GAACAACTCCGTGTTGCTAA+AGG	+	chr8_4:50799157-50799176	Msa1331280:CDS	45.0%
!	ACTCCGTGTTGCTAAAGGTT+TGG	+	chr8_4:50799162-50799181	Msa1331280:CDS	45.0%
	GTGCCAAACCTTTAGCAACA+CGG	-	chr8_4:50799168-50799187	None:intergenic	45.0%
!	TCGGATTTAGGTTTGGCTTC+AGG	-	chr8_4:50799217-50799236	None:intergenic	45.0%
	TCAGGTTCAGCTTCGGATTT+AGG	-	chr8_4:50799229-50799248	None:intergenic	45.0%
!	CCAGCTTTGTCTTCGATTTC+AGG	-	chr8_4:50799247-50799266	None:intergenic	45.0%
	CCTGAAATCGAAGACAAAGC+TGG	+	chr8_4:50799244-50799263	Msa1331280:CDS	45.0%
!	GAAGACAAAGCTGGTGATGT+AGG	+	chr8_4:50799253-50799272	Msa1331280:CDS	45.0%
	TTGAAGATGAGGAAAGAGCC+TGG	+	chr8_4:50799379-50799398	Msa1331280:CDS	45.0%
!!	GGTTATGGTGTTACTGGGAA+AGG	+	chr8_4:50799448-50799467	Msa1331280:CDS	45.0%
!	CATGATGATGATGTTGGTGG+TGG	+	chr8_4:50799511-50799530	Msa1331280:CDS	45.0%
!!	GGTGGTGATGATAGTGGAAA+TGG	+	chr8_4:50799529-50799548	Msa1331280:CDS	45.0%
!!	GGTGATGATAGTGGAAATGG+CGG	+	chr8_4:50799532-50799551	Msa1331280:CDS	45.0%
	GTGATAGGAAGGGTGAGAAA+AGG	+	chr8_4:50799557-50799576	Msa1331280:CDS	45.0%
	TGAGGGAAGAGAGGTTGAAA+AGG	+	chr8_4:50799599-50799618	Msa1331280:CDS	45.0%
	GAGGGAAGAGAGGTTGAAAA+GGG	+	chr8_4:50799600-50799619	Msa1331280:CDS	45.0%
	GGAGAAGAAAGAGAAGGAGA+GGG	+	chr8_4:50799621-50799640	Msa1331280:CDS	45.0%
	TCTCGACGACTTTGTTCCTT+CGG	-	chr8_4:50799667-50799686	None:intergenic	45.0%
	CTACACAAGGTTACTGCAAC+TGG	-	chr8_4:50800162-50800181	None:intergenic	45.0%
	GTGTTTGTGATACGGTGTGT+TGG	+	chr8_4:50800251-50800270	Msa1331280:intron	45.0%
	TTGCTTGTTCAGCTGCAAGT+TGG	+	chr8_4:50800509-50800528	Msa1331280:intron	45.0%
	TGGAAAACCTACACGAGAAG+GGG	+	chr8_4:50800663-50800682	Msa1331280:intron	45.0%
	GCTCTGTTTGAGAGTTTGGA+GGG	+	chr8_4:50800819-50800838	Msa1331280:intron	45.0%
	TGTTTGAGAGTTTGGAGGGA+GGG	+	chr8_4:50800823-50800842	Msa1331280:intron	45.0%
	ATAGTCTCCCAACTTGAAGG+GGG	-	chr8_4:50801041-50801060	None:intergenic	45.0%
	GATAGTCTCCCAACTTGAAG+GGG	-	chr8_4:50801042-50801061	None:intergenic	45.0%
	GGATAGTCTCCCAACTTGAA+GGG	-	chr8_4:50801043-50801062	None:intergenic	45.0%
	AGGATAGTCTCCCAACTTGA+AGG	-	chr8_4:50801044-50801063	None:intergenic	45.0%
	CTCTTCCTAAACTCCCCAAA+TGG	+	chr8_4:50801113-50801132	Msa1331280:intron	45.0%
	AAGCTCCATTTGGGGAGTTT+AGG	-	chr8_4:50801121-50801140	None:intergenic	45.0%
!	CCACTGACTAAAGCTCCATT+TGG	-	chr8_4:50801131-50801150	None:intergenic	45.0%
!	CCAAATGGAGCTTTAGTCAG+TGG	+	chr8_4:50801128-50801147	Msa1331280:intron	45.0%
	GGTGAATGTAGGGTTAGATG+TGG	+	chr8_4:50801980-50801999	Msa1331280:intron	45.0%
	TGTAGGGTTAGATGTGGTTG+TGG	+	chr8_4:50801986-50802005	Msa1331280:intron	45.0%
	GTAGGGTTAGATGTGGTTGT+GGG	+	chr8_4:50801987-50802006	Msa1331280:intron	45.0%
	ATAGCACTGCACATACAGTG+TGG	+	chr8_4:50802017-50802036	Msa1331280:intron	45.0%
!!	TAGCGCTGACAGTGTTTGAT+TGG	+	chr8_4:50802088-50802107	Msa1331280:intron	45.0%
	GGAGCTACATATATGTGAGG+GGG	-	chr8_4:50802211-50802230	None:intergenic	45.0%
	CGGAGCTACATATATGTGAG+GGG	-	chr8_4:50802212-50802231	None:intergenic	45.0%
	GCGGAGCTACATATATGTGA+GGG	-	chr8_4:50802213-50802232	None:intergenic	45.0%
	ATGGCAGTCACTAAAGCCAT+GGG	-	chr8_4:50802235-50802254	None:intergenic	45.0%
	TATGGCAGTCACTAAAGCCA+TGG	-	chr8_4:50802236-50802255	None:intergenic	45.0%
	TGTGAGGAAGGGAAAATCCT+GGG	-	chr8_4:50802880-50802899	None:intergenic	45.0%
	ATGTGAGGAAGGGAAAATCC+TGG	-	chr8_4:50802881-50802900	None:intergenic	45.0%
!	AGGATTTTCCCTTCCTCACA+TGG	+	chr8_4:50802880-50802899	Msa1331280:CDS	45.0%
!	GGATTTTCCCTTCCTCACAT+GGG	+	chr8_4:50802881-50802900	Msa1331280:CDS	45.0%
!	CATTTTCACCCAAGCTTCCT+CGG	+	chr8_4:50802952-50802971	Msa1331280:CDS	45.0%
!	ATTTTCACCCAAGCTTCCTC+GGG	+	chr8_4:50802953-50802972	Msa1331280:CDS	45.0%
!!!	ATGAAATAATTTTAAATTAA+AGG	+	chr8_4:50801892-50801911	Msa1331280:intron	5.0%
	CGAAAAATGGGTGGACATGG+CGG	+	chr8_4:50798992-50799011	Msa1331280:exon	50.0%
	AAGCTGTTCTTCTTTGGCGG+CGG	-	chr8_4:50799095-50799114	None:intergenic	50.0%
!!	GATTCAGGTGGCGGAATTGT+TGG	-	chr8_4:50799190-50799209	None:intergenic	50.0%
!	TTGGCTTCAGGTTCGGATTC+AGG	-	chr8_4:50799205-50799224	None:intergenic	50.0%
	GGAAAGGGGTTGAATTGCCT+TGG	+	chr8_4:50799464-50799483	Msa1331280:CDS	50.0%
!!	GTTGGTGGTGGTGATGATAG+TGG	+	chr8_4:50799523-50799542	Msa1331280:CDS	50.0%
!!	GATGATAGTGGAAATGGCGG+TGG	+	chr8_4:50799535-50799554	Msa1331280:CDS	50.0%
	AAATGGCGGTGGTGATAGGA+AGG	+	chr8_4:50799546-50799565	Msa1331280:CDS	50.0%
	AATGGCGGTGGTGATAGGAA+GGG	+	chr8_4:50799547-50799566	Msa1331280:CDS	50.0%
	TGGAAGAGTTGAGGGAAGAG+AGG	+	chr8_4:50799590-50799609	Msa1331280:CDS	50.0%
	GGGAGAAGAAAGAGAAGGAG+AGG	+	chr8_4:50799620-50799639	Msa1331280:CDS	50.0%
	CTCGACGACTTTGTTCCTTC+GGG	-	chr8_4:50799666-50799685	None:intergenic	50.0%
!	CTTGTTCAGCTGCAAGTTGG+TGG	+	chr8_4:50800512-50800531	Msa1331280:intron	50.0%
	CTATGTTCCCCTTCTCGTGT+AGG	-	chr8_4:50800673-50800692	None:intergenic	50.0%
	GGCTCTGTTTGAGAGTTTGG+AGG	+	chr8_4:50800818-50800837	Msa1331280:intron	50.0%
	CTGTTTGAGAGTTTGGAGGG+AGG	+	chr8_4:50800822-50800841	Msa1331280:intron	50.0%
	GTTTGAGAGTTTGGAGGGAG+GGG	+	chr8_4:50800824-50800843	Msa1331280:intron	50.0%
	AAGTGTGTTTGGTTGTGCGG+TGG	+	chr8_4:50801573-50801592	Msa1331280:intron	50.0%
	GGCGGAGCTACATATATGTG+AGG	-	chr8_4:50802214-50802233	None:intergenic	50.0%
	CATATATGTAGCTCCGCCCA+TGG	+	chr8_4:50802216-50802235	Msa1331280:intron	50.0%
!	GGCTTTAGTGACTGCCATAC+TGG	+	chr8_4:50802237-50802256	Msa1331280:intron	50.0%
	CAGGATTCCCATGTGAGGAA+GGG	-	chr8_4:50802891-50802910	None:intergenic	50.0%
	TTCTCAAGAGCGAAGCTAGC+AGG	-	chr8_4:50802910-50802929	None:intergenic	50.0%
	TTCAGAACCCGAGGAAGCTT+GGG	-	chr8_4:50802963-50802982	None:intergenic	50.0%
!!	TACAGGGTTGGTTTGAGAGC+TGG	+	chr8_4:50803004-50803023	Msa1331280:three_prime_UTR	50.0%
	TCAGGTTCGGATTCAGGTGG+CGG	-	chr8_4:50799199-50799218	None:intergenic	55.0%
!	GCTTCAGGTTCGGATTCAGG+TGG	-	chr8_4:50799202-50799221	None:intergenic	55.0%
	ACAGCACGAACAGTCTCACC+AGG	-	chr8_4:50799400-50799419	None:intergenic	55.0%
	GGTGAGACTGTTCGTGCTGT+TGG	+	chr8_4:50799400-50799419	Msa1331280:CDS	55.0%
!	GACTGTTCGTGCTGTTGGAC+CGG	+	chr8_4:50799405-50799424	Msa1331280:CDS	55.0%
	GTGGAAATGGCGGTGGTGAT+AGG	+	chr8_4:50799542-50799561	Msa1331280:CDS	55.0%
	TTTGGAGGGAGGGGATGAGA+GGG	+	chr8_4:50800833-50800852	Msa1331280:intron	55.0%
	CTTTAGTCAGTGGCGTTGCC+AGG	+	chr8_4:50801138-50801157	Msa1331280:intron	55.0%
	GCAGTCACTAAAGCCATGGG+CGG	-	chr8_4:50802232-50802251	None:intergenic	55.0%
	GTTCTGCACTGAGATCTCCC+AGG	+	chr8_4:50802860-50802879	Msa1331280:CDS	55.0%
	GCAGGATTCCCATGTGAGGA+AGG	-	chr8_4:50802892-50802911	None:intergenic	55.0%
	GCTAGCAGGATTCCCATGTG+AGG	-	chr8_4:50802896-50802915	None:intergenic	55.0%
	CTTCAGAACCCGAGGAAGCT+TGG	-	chr8_4:50802964-50802983	None:intergenic	55.0%
	CGGCGGCTTCTTCGTCTTTG+CGG	-	chr8_4:50799078-50799097	None:intergenic	60.0%
	GTTTGGAGGGAGGGGATGAG+AGG	+	chr8_4:50800832-50800851	Msa1331280:intron	60.0%
!	AGGAGAGGGAGAGCGCGTTG+AGG	+	chr8_4:50799635-50799654	Msa1331280:CDS	65.0%
!	AGAGGGAGAGCGCGTTGAGG+CGG	+	chr8_4:50799638-50799657	Msa1331280:CDS	65.0%
	GTTGCCAGGACCCTGGAGCA+GGG	+	chr8_4:50801152-50801171	Msa1331280:intron	65.0%
	TTGCCAGGACCCTGGAGCAG+GGG	+	chr8_4:50801153-50801172	Msa1331280:intron	65.0%
	GTCTGAACCCCCCTGCTCCA+GGG	-	chr8_4:50801165-50801184	None:intergenic	65.0%
	AGTCTGAACCCCCCTGCTCC+AGG	-	chr8_4:50801166-50801185	None:intergenic	65.0%
	GGGTTCAACTGAACCCCCCC+TGG	-	chr8_4:50802191-50802210	None:intergenic	65.0%
	CAGTGGCGTTGCCAGGACCC+TGG	+	chr8_4:50801145-50801164	Msa1331280:intron	70.0%
	CGTTGCCAGGACCCTGGAGC+AGG	+	chr8_4:50801151-50801170	Msa1331280:intron	70.0%
	TGCCAGGACCCTGGAGCAGG+GGG	+	chr8_4:50801154-50801173	Msa1331280:intron	70.0%
	CGCGTTGAGGCGGCACCCGA+AGG	+	chr8_4:50799648-50799667	Msa1331280:CDS	75.0%
	GCCAGGACCCTGGAGCAGGG+GGG	+	chr8_4:50801155-50801174	Msa1331280:intron	75.0%
	ACCCCCCTGCTCCAGGGTCC+TGG	-	chr8_4:50801159-50801178	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_4	gene	50798896	50803329	50798896	ID=Msa1331280;Name=Msa1331280
chr8_4	mRNA	50798896	50803329	50798896	ID=Msa1331280-mRNA-1;Parent=Msa1331280;Name=Msa1331280-mRNA-1;_AED=0.03;_eAED=0.03;_QI=102\|0\|0.66\|0.66\|1\|1\|3\|348\|310
chr8_4	exon	50798896	50799713	50798896	ID=Msa1331280-mRNA-1:exon:14869;Parent=Msa1331280-mRNA-1
chr8_4	exon	50800450	50800526	50800450	ID=Msa1331280-mRNA-1:exon:14870;Parent=Msa1331280-mRNA-1
chr8_4	exon	50802842	50803329	50802842	ID=Msa1331280-mRNA-1:exon:14871;Parent=Msa1331280-mRNA-1
chr8_4	five_prime_UTR	50798896	50798997	50798896	ID=Msa1331280-mRNA-1:five_prime_utr;Parent=Msa1331280-mRNA-1
chr8_4	CDS	50798998	50799713	50798998	ID=Msa1331280-mRNA-1:cds;Parent=Msa1331280-mRNA-1
chr8_4	CDS	50800450	50800526	50800450	ID=Msa1331280-mRNA-1:cds;Parent=Msa1331280-mRNA-1
chr8_4	CDS	50802842	50802981	50802842	ID=Msa1331280-mRNA-1:cds;Parent=Msa1331280-mRNA-1
chr8_4	three_prime_UTR	50802982	50803329	50802982	ID=Msa1331280-mRNA-1:three_prime_utr;Parent=Msa1331280-mRNA-1

Gene Sequence

>Msa1331280

ATGGGTGGACATGGCGGTTTGAACATTCTCCCTCAAAAACGTTGGAACGTTTACAATTTCGATAACAGAGAAAAAGTCCGCAAAGACGAAGAAGCCGCCGCCAAAGAAGAACAGCTTAAACGCGAACAATCGCGAAAACGCGACACCGAAGTCCGTCTTGAACAACTCCGTGTTGCTAAAGGTTTGGCACCAACAATTCCGCCACCTGAATCCGAACCTGAAGCCAAACCTAAATCCGAAGCTGAACCTGAAATCGAAGACAAAGCTGGTGATGTAGGTCATATTAATTTATTCAAAGGAATTAAGATTTTTGATCCGATTCGTGTACCGAAAAGAGAGATTGTTGATGAAAAAGAGGAATTGAAAAAGAATTATAAGAAGTTGAAGATGAGGAAAGAGCCTGGTGAGACTGTTCGTGCTGTTGGACCGGAAGATGAGAAATATAAATTAGGTTATGGTGTTACTGGGAAAGGGGTTGAATTGCCTTGGTATGTTCAAAAGAAGAAATTCAATCATGATGATGATGTTGGTGGTGGTGATGATAGTGGAAATGGCGGTGGTGATAGGAAGGGTGAGAAAAGGAAGAAGACATTGGAAGAGTTGAGGGAAGAGAGGTTGAAAAGGGAGAAGAAAGAGAAGGAGAGGGAGAGCGCGTTGAGGCGGCACCCGAAGGAACAAAGTCGTCGAGATGCTGTTGCAAGTGATAGATACTACAGAAGGAGAAATGATGGTCTGTTTGCAAGGCTGAGTTTTCAAATGAGAATGAATTGGTCTATTGCTTGTTCAGCTGCAAGAGATGATTGTGTCAAGGGTTCTGCACTGAGATCTCCCAGGATTTTCCCTTCCTCACATGGGAATCCTGCTAGCTTCGCTCTTGAGAAACTTATAGCAAATTGTCGCAAGCATTTTCACCCAAGCTTCCTCGGGTTCTGA

Protein sequence

>Msa1331280

MGGHGGLNILPQKRWNVYNFDNREKVRKDEEAAAKEEQLKREQSRKRDTEVRLEQLRVAKGLAPTIPPPESEPEAKPKSEAEPEIEDKAGDVGHINLFKGIKIFDPIRVPKREIVDEKEELKKNYKKLKMRKEPGETVRAVGPEDEKYKLGYGVTGKGVELPWYVQKKKFNHDDDVGGGDDSGNGGGDRKGEKRKKTLEELREERLKREKKEKERESALRRHPKEQSRRDAVASDRYYRRRNDGLFARLSFQMRMNWSIACSAARDDCVKGSALRSPRIFPSSHGNPASFALEKLIANCRKHFHPSFLGF*