AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0034540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034540 MtrunA17_Chr1g0196911 97.191 1495 20 3 8 1494 1 1481 0.0 2986
Msa0034540 MtrunA17_Chr8g0390311 41.945 987 508 17 527 1494 395 1335 0.0 724
Msa0034540 MtrunA17_Chr2g0295801 25.815 798 545 20 719 1491 371 1146 1.29e-69 256
Msa0034540 MtrunA17_Chr2g0295801 33.533 167 104 2 7 173 1 160 7.39e-17 87.0
Msa0034540 MtrunA17_Chr2g0291731 31.309 527 343 8 647 1157 376 899 3.28e-58 219
Msa0034540 MtrunA17_Chr7g0214471 28.774 424 267 15 790 1184 637 1054 2.94e-27 120
Msa0034540 MtrunA17_Chr7g0214471 34.969 163 101 3 489 647 554 715 1.52e-21 102
Msa0034540 MtrunA17_Chr7g0214471 26.667 240 137 5 15 249 200 405 4.99e-15 80.9
Msa0034540 MtrunA17_Chr4g0031431 25.236 424 247 17 528 928 256 632 1.13e-17 89.0
Msa0034540 MtrunA17_Chr4g0044631 47.561 82 40 2 518 598 5 84 1.32e-16 84.0
Msa0034540 MtrunA17_Chr7g0275081 51.282 78 36 2 527 603 78 154 1.43e-16 84.3
Msa0034540 MtrunA17_Chr4g0044411 31.183 186 99 5 528 703 274 440 1.58e-15 82.0
Msa0034540 MtrunA17_Chr3g0122721 48.611 72 36 1 527 598 280 350 1.64e-15 82.4
Msa0034540 MtrunA17_Chr7g0237931 50.704 71 34 1 528 598 238 307 7.68e-15 79.7
Msa0034540 MtrunA17_Chr4g0059201 33.121 157 89 5 519 661 311 465 9.20e-15 79.7
Msa0034540 MtrunA17_Chr1g0177301 50.000 76 37 1 528 602 7 82 1.07e-14 78.2
Msa0034540 MtrunA17_Chr1g0199321 43.689 103 55 3 528 629 248 348 1.50e-14 79.0
Msa0034540 MtrunA17_Chr8g0377151 44.444 72 39 1 527 598 282 352 7.30e-14 77.0
Msa0034540 MtrunA17_Chr7g0275961 46.575 73 38 1 526 598 254 325 1.39e-13 76.3
Msa0034540 MtrunA17_Chr7g0248251 46.479 71 37 1 528 598 275 344 1.44e-13 75.9
Msa0034540 MtrunA17_Chr5g0413681 41.667 96 42 3 530 624 283 365 2.38e-13 75.1
Msa0034540 MtrunA17_Chr3g0106931 45.833 72 36 2 528 598 234 303 2.48e-13 75.1
Msa0034540 MtrunA17_Chr2g0322021 45.122 82 38 3 528 604 7 86 3.39e-13 73.6
Msa0034540 MtrunA17_Chr2g0284461 48.529 68 32 2 528 594 293 358 3.97e-13 74.3
Msa0034540 MtrunA17_Chr7g0234671 41.250 80 45 2 528 606 79 157 7.45e-13 72.8
Msa0034540 MtrunA17_Chr1g0177261 32.857 140 76 4 531 659 11 143 7.58e-13 72.8
Msa0034540 MtrunA17_Chr1g0177281 32.857 140 76 4 531 659 11 143 8.14e-13 72.4
Msa0034540 MtrunA17_Chr7g0261371 44.737 76 39 2 524 598 238 311 9.59e-13 73.2
Msa0034540 MtrunA17_Chr5g0434171 40.698 86 46 3 528 612 36 117 1.47e-12 71.6
Msa0034540 MtrunA17_Chr7g0267501 49.275 69 33 2 528 594 9 77 1.71e-12 71.2
Msa0034540 MtrunA17_Chr3g0110121 40.625 96 48 4 518 612 31 118 1.73e-12 71.6
Msa0034540 MtrunA17_Chr1g0177271 41.772 79 41 2 531 604 11 89 2.76e-12 70.9
Msa0034540 MtrunA17_Chr4g0043451 25.306 245 140 7 12 247 104 314 3.01e-12 69.7
Msa0034540 MtrunA17_Chr1g0183781 44.444 72 37 2 524 594 238 307 3.04e-12 71.6
Msa0034540 MtrunA17_Chr4g0048811 42.169 83 47 1 528 610 6 87 4.72e-12 69.3
Msa0034540 MtrunA17_Chr5g0400971 41.237 97 54 2 528 623 68 162 8.58e-12 69.3
Msa0034540 MtrunA17_Chr8g0373031 31.897 116 75 2 483 598 234 345 9.99e-12 70.1
Msa0034540 MtrunA17_Chr5g0420471 41.667 72 39 2 528 598 26 95 1.75e-11 68.2
Msa0034540 MtrunA17_Chr6g0479261 41.667 72 39 2 528 598 26 95 3.45e-11 67.4
Msa0034540 MtrunA17_Chr3g0117851 30.000 180 111 6 528 702 276 445 4.09e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034540 AT3G06880.2 25.881 823 566 22 694 1491 458 1261 2.87e-65 244
Msa0034540 AT3G06880.2 32.258 155 101 2 18 171 23 174 7.88e-14 77.4
Msa0034540 AT3G06880.1 25.795 818 563 22 694 1486 458 1256 6.67e-64 239
Msa0034540 AT3G06880.1 32.258 155 101 2 18 171 23 174 7.48e-14 77.8
Msa0034540 AT3G06880.4 24.855 861 565 22 694 1491 458 1299 1.28e-61 233
Msa0034540 AT3G06880.4 32.258 155 101 2 18 171 23 174 6.83e-14 77.8
Msa0034540 AT3G06880.5 26.200 729 504 16 694 1401 458 1173 5.75e-60 227
Msa0034540 AT3G06880.5 32.258 155 101 2 18 171 23 174 6.85e-14 77.8
Msa0034540 AT3G06880.3 26.200 729 504 16 694 1401 458 1173 6.32e-60 227
Msa0034540 AT3G06880.3 32.258 155 101 2 18 171 23 174 7.17e-14 77.8
Msa0034540 AT1G23030.1 24.651 430 246 20 517 924 235 608 1.80e-17 88.6
Msa0034540 AT1G49780.1 50.000 82 38 2 518 598 5 84 3.68e-17 86.3
Msa0034540 AT2G28830.1 47.222 72 37 1 527 598 184 254 7.51e-16 83.2
Msa0034540 AT3G46510.1 49.296 71 35 1 528 598 257 326 3.42e-15 81.6
Msa0034540 AT3G54850.1 36.735 147 81 6 528 664 249 393 3.96e-15 81.3
Msa0034540 AT5G42340.1 50.000 72 33 2 528 598 291 360 6.79e-15 80.5
Msa0034540 AT1G29340.1 29.297 256 159 8 528 777 306 545 7.42e-15 80.5
Msa0034540 AT4G21350.1 44.944 89 43 2 528 610 6 94 9.66e-15 78.6
Msa0034540 AT1G27910.1 28.829 222 127 8 525 735 277 478 1.04e-14 80.1
Msa0034540 AT1G71020.2 43.158 95 48 3 517 610 89 178 3.21e-14 77.8
Msa0034540 AT3G19380.1 45.783 83 41 3 518 598 5 85 4.17e-14 77.0
Msa0034540 AT1G71020.1 43.158 95 48 3 517 610 237 326 4.18e-14 77.8
Msa0034540 AT1G68940.2 37.500 128 72 5 477 598 247 372 1.02e-13 77.0
Msa0034540 AT1G68940.1 37.500 128 72 5 477 598 247 372 1.03e-13 77.0
Msa0034540 AT1G68940.3 37.500 128 72 5 477 598 194 319 1.17e-13 77.0
Msa0034540 AT1G24330.1 47.222 72 37 1 527 598 275 345 2.46e-13 75.5
Msa0034540 AT1G24330.2 47.222 72 37 1 527 598 275 345 2.46e-13 75.5
Msa0034540 AT1G67530.3 48.611 72 36 1 527 598 272 342 2.50e-13 75.1
Msa0034540 AT1G67530.2 48.611 72 36 1 527 598 272 342 3.12e-13 75.5
Msa0034540 AT1G67530.1 48.611 72 36 1 527 598 272 342 3.12e-13 75.5
Msa0034540 AT1G67530.4 48.611 72 36 1 527 598 272 342 3.12e-13 75.5
Msa0034540 AT3G07360.1 39.080 87 48 2 512 598 63 144 1.67e-12 72.0
Msa0034540 AT1G60190.1 44.928 69 37 1 530 598 281 348 4.82e-12 71.2
Msa0034540 AT1G10560.1 39.241 79 41 1 499 577 267 338 5.32e-12 71.2
Msa0034540 AT5G01830.1 48.529 68 32 2 528 594 275 340 5.89e-12 70.9
Msa0034540 AT5G67340.1 31.429 140 76 3 528 650 241 377 1.11e-11 70.1
Msa0034540 AT5G67340.2 31.429 140 76 3 528 650 241 377 1.11e-11 70.1
Msa0034540 AT2G35930.1 40.659 91 48 4 528 616 13 99 1.76e-11 68.6
Msa0034540 AT2G23140.1 42.857 70 37 2 530 598 236 303 1.84e-11 69.7
Msa0034540 AT2G23140.2 42.857 70 37 2 530 598 233 300 1.92e-11 69.7
Msa0034540 AT2G23140.4 42.857 70 37 2 530 598 233 300 1.92e-11 69.7
Msa0034540 AT3G54790.2 40.789 76 42 2 524 598 199 272 2.10e-11 69.3
Msa0034540 AT2G23140.3 42.857 70 37 2 530 598 44 111 2.12e-11 69.3
Msa0034540 AT2G23140.5 42.857 70 37 2 530 598 44 111 2.12e-11 69.3
Msa0034540 AT3G54790.3 40.789 76 42 2 524 598 235 308 2.32e-11 69.3
Msa0034540 AT3G54790.1 40.789 76 42 2 524 598 235 308 2.32e-11 69.3
Msa0034540 AT5G65920.1 28.431 204 119 6 528 731 61 237 2.62e-11 68.2
Msa0034540 AT5G65920.2 28.431 204 119 6 528 731 61 237 2.62e-11 68.2
Msa0034540 AT3G52450.1 38.889 90 51 3 528 616 8 94 8.25e-11 66.6
Msa0034540 AT5G09800.1 43.023 86 45 3 528 611 12 95 9.55e-11 66.2

Find 251 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAATCTATCCTATTTA+TGG 0.070332 1_1:+62602997 Msa0034540:CDS
TCAAGCAGTATTAGCAAATT+TGG 0.142722 1_1:+62602812 Msa0034540:CDS
ATATTTGCTGGTACGAAATT+TGG 0.145147 1_1:+62609143 Msa0034540:CDS
GCACTCAAACTTTGAATTCT+TGG 0.157535 1_1:+62603573 Msa0034540:CDS
GTAAAATGCCTTGCTGTTTC+TGG 0.178774 1_1:+62608584 Msa0034540:CDS
GATGCTTTACTATTTCTTAT+TGG 0.180264 1_1:+62606819 Msa0034540:CDS
ATAGTCAGTTTCTCTAATTT+TGG 0.186126 1_1:-62604858 None:intergenic
TCCAGCCATAGTCAAGTATT+TGG 0.204570 1_1:+62605883 Msa0034540:CDS
TGCAATTTCTCAAGCTGATT+TGG 0.216622 1_1:-62603275 None:intergenic
GTTCCTCAATTTCCATAAAT+AGG 0.235200 1_1:-62603009 None:intergenic
CCAGAACTCTTGGGCAAAAT+AGG 0.235664 1_1:-62603488 None:intergenic
TAGCGATCCCACCACCATTT+TGG 0.246740 1_1:-62609075 None:intergenic
GAGAATTCATTTGATTCTTT+TGG 0.256304 1_1:-62604142 None:intergenic
AAGCTTAGTTTCCATATTAT+AGG 0.258565 1_1:-62602871 None:intergenic
CAAGCTGATAAATATGAATT+TGG 0.264134 1_1:-62602969 None:intergenic
TCTTCTTCAACTTGATCTTT+TGG 0.265796 1_1:+62606603 Msa0034540:CDS
ATTGCTATGGCGGCAGCTTT+AGG 0.273435 1_1:-62605782 None:intergenic
CCTTGATTATCTGTAATATA+TGG 0.282963 1_1:-62606495 None:intergenic
CATAGGTTTGGCCTGTTTCA+AGG 0.293403 1_1:-62604947 None:intergenic
TGGTTTGATCGATATACTTT+TGG 0.305731 1_1:-62604122 None:intergenic
AGCTATTAATACCTATAATA+TGG 0.312268 1_1:+62602860 Msa0034540:CDS
GAGTTATTTGAAGCTCTTCT+TGG 0.312945 1_1:-62604188 None:intergenic
TTGCTATGGCGGCAGCTTTA+GGG 0.317352 1_1:-62605781 None:intergenic
GCTAGCAGCCAATGCTAAAA+TGG 0.323662 1_1:+62608398 Msa0034540:CDS
AGATTCCATAGGAGATATAT+TGG 0.323789 1_1:-62604165 None:intergenic
GTTTCATTTAAACCATCATT+AGG 0.335077 1_1:-62603533 None:intergenic
CCGAGTTGCTTCCATCAAAA+TGG 0.336928 1_1:+62609199 Msa0034540:CDS
AACAGTGACTTCATATTTGC+TGG 0.339514 1_1:+62609131 Msa0034540:CDS
CACTGCCGATGAAGAAGTTA+TGG 0.343363 1_1:+62604343 Msa0034540:CDS
TTCTTGCTTGAGGTAGAATC+AGG 0.346848 1_1:-62603377 None:intergenic
CACGAAAGATGAGCATTTAC+AGG 0.350246 1_1:+62606724 Msa0034540:CDS
TTTAATGAAGGCCGAGCAAT+TGG 0.353830 1_1:+62606920 Msa0034540:CDS
AGTATTAGCAAATTTGGATT+GGG 0.363457 1_1:+62602818 Msa0034540:CDS
TAGATAGTTTCATTCAAGAT+AGG 0.364465 1_1:+62602685 Msa0034540:CDS
AATTTGGCACCATTGAAGTT+TGG 0.369646 1_1:+62609159 Msa0034540:CDS
GAGAATTCTTGAGCTAGTTC+AGG 0.370421 1_1:-62605107 None:intergenic
TCCAAATACTTGACTATGGC+TGG 0.371010 1_1:-62605884 None:intergenic
GCCTTCATTAAAACATTGTA+AGG 0.371880 1_1:-62606909 None:intergenic
CAAATTCATATTTATCAGCT+TGG 0.372525 1_1:+62602970 Msa0034540:CDS
ATTGGACAAACAAAATCTTT+TGG 0.373432 1_1:-62604894 None:intergenic
CATAGAAAATCCAGAACTCT+TGG 0.374741 1_1:-62603498 None:intergenic
CGGTTCAATATTTCAAGCTT+TGG 0.377443 1_1:+62607131 Msa0034540:CDS
TTCTACCTCAGTTTCTTTGT+CGG 0.378240 1_1:-62602781 None:intergenic
GGACCAAACTTTACAAAATC+AGG 0.378419 1_1:-62603467 None:intergenic
CCTCCAGGTTCTTGGATGAC+TGG 0.381799 1_1:-62607302 None:intergenic
TCTTTAAGGAGTTACTCTTT+AGG 0.382578 1_1:-62607161 None:intergenic
TGTGGAGTTTCTCTCAGAAC+TGG 0.384790 1_1:+62606057 Msa0034540:CDS
CTTTCTTTGCATTATCTGAA+TGG 0.385001 1_1:+62607732 Msa0034540:CDS
AAATATGAAGTCACTGTTGA+TGG 0.388514 1_1:-62609126 None:intergenic
AACTCATATGTGGAAGAAAC+AGG 0.388802 1_1:-62603124 None:intergenic
CACTGGTACCAGAAAATTGT+TGG 0.389866 1_1:+62608879 Msa0034540:CDS
AACAGAATTTAAGTTTAGTA+AGG 0.390805 1_1:-62607554 None:intergenic
CACTACTTATTTACCAACTA+AGG 0.391755 1_1:+62605657 Msa0034540:CDS
ATATGATCGGAGCTCGTGTC+TGG 0.392875 1_1:-62604317 None:intergenic
TAAAATGCCTTGCTGTTTCT+GGG 0.393871 1_1:+62608585 Msa0034540:CDS
TTTGTCCAAATACTTGACTA+TGG 0.397086 1_1:-62605888 None:intergenic
CTTGATGCAGGTCTGGGCAT+TGG 0.397866 1_1:+62609389 Msa0034540:intron
CTAAATATCTGACCTGTGAT+TGG 0.400235 1_1:-62604912 None:intergenic
CTGTAAATGCTCATCTTTCG+TGG 0.409580 1_1:-62606723 None:intergenic
GAGTTAGATTTGAGCTCAAA+TGG 0.414070 1_1:+62607702 Msa0034540:CDS
ATTGGACATGTCACTTCCTC+AGG 0.414180 1_1:+62606837 Msa0034540:CDS
GTCATCGGCGGCTCCGCAAT+TGG 0.415080 1_1:-62603416 None:intergenic
ATGAATTTGAAGGGAGTGTA+TGG 0.415392 1_1:-62608911 None:intergenic
TAGGAGGGGATGAATATAAT+AGG 0.415412 1_1:+62605822 Msa0034540:CDS
GCTGGATTGCTGAAGATTGC+AGG 0.415549 1_1:+62606876 Msa0034540:CDS
TATAGATGTTTATGACGTTA+AGG 0.420441 1_1:+62608362 Msa0034540:CDS
AAATTCATATTTATCAGCTT+GGG 0.420759 1_1:+62602971 Msa0034540:CDS
ACATCCCTTACACCAGTATC+AGG 0.422131 1_1:-62607240 None:intergenic
CACAAAAGTATGGAAATTAC+AGG 0.422298 1_1:-62605926 None:intergenic
GAGTTGTATTTATCATTCTC+TGG 0.423822 1_1:+62603040 Msa0034540:CDS
ATGTACATCAGAAAACTTGC+AGG 0.424893 1_1:+62605364 Msa0034540:CDS
TATCCTATTTATGGAAATTG+AGG 0.425248 1_1:+62603006 Msa0034540:CDS
CTCTTTACTCTACCTGATAC+TGG 0.425742 1_1:+62607228 Msa0034540:CDS
ACACTCTGACAATGATTTCA+TGG 0.427684 1_1:+62606944 Msa0034540:CDS
CCACATATGAGTTCAATTGT+AGG 0.430162 1_1:+62603134 Msa0034540:CDS
GATCCTGTCACCCTTGAAAC+AGG 0.432846 1_1:+62604936 Msa0034540:CDS
TAAACTCTACAGTTCTTCCT+TGG 0.433043 1_1:+62607961 Msa0034540:CDS
TTTGCATTATCTGAATGGTC+AGG 0.435526 1_1:+62607737 Msa0034540:CDS
AATTACAGGTCTCCTTCCTT+CGG 0.436013 1_1:-62605912 None:intergenic
TGGCCTGTTTCAAGGGTGAC+AGG 0.436085 1_1:-62604939 None:intergenic
TTGCATGCAACACAAAAGTA+TGG 0.436934 1_1:-62605936 None:intergenic
AAATTAGAGAAACTGACTAT+TGG 0.437172 1_1:+62604861 Msa0034540:CDS
CCATGAAATCTTGGCAGAAA+AGG 0.437863 1_1:+62607079 Msa0034540:CDS
CTCTACCTGATACTGGTGTA+AGG 0.438722 1_1:+62607235 Msa0034540:CDS
CAGAACTGGTTCGATTGAAT+AGG 0.440535 1_1:+62606071 Msa0034540:CDS
GATAGAGCCTGTCGCGTGAT+GGG 0.443199 1_1:-62605017 None:intergenic
TGAAGAGATTGAAGACGGTT+CGG 0.446459 1_1:+62604007 Msa0034540:CDS
TCATTGTCTTGATTCATACT+TGG 0.446559 1_1:-62604620 None:intergenic
TTCAAATTCCAACCATTCAA+AGG 0.449806 1_1:+62603835 Msa0034540:CDS
ATTCAAGAGTGGCTTGGAAC+AGG 0.450484 1_1:+62604981 Msa0034540:CDS
TATGCTACTTAAGAATGGTT+TGG 0.451339 1_1:+62605625 Msa0034540:CDS
AAACTGTACTGTGGTTGCTC+TGG 0.452022 1_1:+62608611 Msa0034540:CDS
TCTATACATTTAATCCCGTC+AGG 0.454522 1_1:-62608345 None:intergenic
TATCTGTAATATATGGTTGC+TGG 0.456041 1_1:-62606488 None:intergenic
GTACTTTGCAATCATGAAAA+CGG 0.458104 1_1:+62607111 Msa0034540:CDS
AGCGTGAAATAATTCAAGAA+TGG 0.458442 1_1:-62606008 None:intergenic
TCAAATTCCAACCATTCAAA+GGG 0.460816 1_1:+62603836 Msa0034540:CDS
CAGTATTAGCAAATTTGGAT+TGG 0.460918 1_1:+62602817 Msa0034540:CDS
TTCTCCCAATATATCTCCTA+TGG 0.461595 1_1:+62604160 Msa0034540:CDS
GGGAAGTCATATACTGAAGC+TGG 0.464073 1_1:+62606858 Msa0034540:CDS
TGAAGAGATTGATAGTATCA+TGG 0.466397 1_1:+62605072 Msa0034540:CDS
TTGGCTATGCTACTTAAGAA+TGG 0.467717 1_1:+62605620 Msa0034540:CDS
ACTAAACCACTTACGACTGT+TGG 0.469402 1_1:-62605470 None:intergenic
CTTGCCTTGTTCTTGCCACA+TGG 0.472377 1_1:+62607193 Msa0034540:CDS
GAATGAAGTAGATGTATGTT+TGG 0.475692 1_1:-62608854 None:intergenic
CTCCTTTGCATGAGTTGAGC+CGG 0.475743 1_1:+62603438 Msa0034540:CDS
GATAGAAGCACTTTGGCAAA+AGG 0.476174 1_1:+62606767 Msa0034540:CDS
GCAAATCATCATGAATTTGA+AGG 0.476764 1_1:-62608921 None:intergenic
GTGGTGGGATCGCTATCAAC+AGG 0.477762 1_1:+62609083 Msa0034540:CDS
ATAGTCTGGTGCTGAATGAC+AGG 0.477864 1_1:+62604645 Msa0034540:CDS
GGACTGTGAACAAGCTGTAT+TGG 0.480205 1_1:+62605385 Msa0034540:CDS
TCAAAGCCAACAGTCGTAAG+TGG 0.482431 1_1:+62605464 Msa0034540:CDS
ACAGCAATTTGATGTTCCAT+TGG 0.487029 1_1:-62606571 None:intergenic
CTTCCTTGGACAAAACAATC+CGG 0.487637 1_1:+62607975 Msa0034540:CDS
ACTTTCCTCCAAAATGGTGG+TGG 0.487837 1_1:+62609067 Msa0034540:CDS
CACATATGAGTTCAATTGTA+GGG 0.488064 1_1:+62603135 Msa0034540:CDS
CATGAAATCTTGGCAGAAAA+GGG 0.490380 1_1:+62607080 Msa0034540:CDS
ACTGGTACCAGAAAATTGTT+GGG 0.492152 1_1:+62608880 Msa0034540:CDS
AGGTCTTGAATAATATTAAG+AGG 0.492814 1_1:+62604579 Msa0034540:intron
GGATAGAGCCTGTCGCGTGA+TGG 0.493815 1_1:-62605018 None:intergenic
TTTGTTGAAATTGATGAACT+TGG 0.496701 1_1:-62608558 None:intergenic
GATTCCATAGGAGATATATT+GGG 0.498157 1_1:-62604164 None:intergenic
TCACATTGTGAAAGTGAAGA+TGG 0.498391 1_1:+62604813 Msa0034540:CDS
ACTTCAAAGCTAGGGATGCT+AGG 0.498977 1_1:-62607332 None:intergenic
AACATGCCCCATCACGCGAC+AGG 0.499012 1_1:+62605010 Msa0034540:CDS
ATAGGTTTGGCCTGTTTCAA+GGG 0.499958 1_1:-62604946 None:intergenic
CAATGATTTCATGGAAACAA+TGG 0.500097 1_1:+62606953 Msa0034540:CDS
GAGAGATTAGCAGCTGAAGA+TGG 0.502192 1_1:+62602753 Msa0034540:CDS
CTTCTCAAATAATCAAATGA+AGG 0.504971 1_1:+62606791 Msa0034540:CDS
TCAAGACAATGAGAATAGTC+TGG 0.505266 1_1:+62604631 Msa0034540:CDS
GCGTGAAATAATTCAAGAAT+GGG 0.505300 1_1:-62606007 None:intergenic
CTCAAATTCTAATACACCAA+GGG 0.505810 1_1:+62605127 Msa0034540:CDS
GATGATTTGCTCTTTGCTTG+TGG 0.505860 1_1:+62608934 Msa0034540:CDS
CCTCCAGTCATCCAAGAACC+TGG 0.506894 1_1:+62607299 Msa0034540:CDS
AATTTGCTCAAGAATTGCTA+TGG 0.507495 1_1:-62605795 None:intergenic
CATTCATGAGTGCCTCAAGC+AGG 0.508382 1_1:-62607275 None:intergenic
TTCCTCTGATGGAAAGATCC+AGG 0.508947 1_1:+62609286 Msa0034540:CDS
ATAGAAAATCCAGAACTCTT+GGG 0.512359 1_1:-62603497 None:intergenic
GTAAATAAGTAGTGCAGCCT+CGG 0.512464 1_1:-62605648 None:intergenic
AAAGAGTAACTCCTTAAAGA+TGG 0.513303 1_1:+62607164 Msa0034540:CDS
GGCTCCGCAATTGGCAACAT+AGG 0.522919 1_1:-62603407 None:intergenic
CAGATTCATGATGGATCAGA+AGG 0.523482 1_1:+62602635 Msa0034540:CDS
ACATCTACTTCATTCTTCAC+TGG 0.523978 1_1:+62608862 Msa0034540:CDS
GGAGAGACATAAGCTTATGA+TGG 0.524695 1_1:+62603169 Msa0034540:CDS
AAAGCTATTCAAGAGTGGCT+TGG 0.525862 1_1:+62604975 Msa0034540:CDS
GTCAGAGTGTCCCAATTGCT+CGG 0.527142 1_1:-62606931 None:intergenic
TGTTCCTATGTTGCCAATTG+CGG 0.527801 1_1:+62603403 Msa0034540:CDS
TAATGAAAGACTTCAAAGCT+AGG 0.529026 1_1:-62607341 None:intergenic
GCTTGCGATAACACACTAGT+TGG 0.529087 1_1:-62605293 None:intergenic
ATATCTTCAGATGGCTCCAA+TGG 0.531000 1_1:+62606555 Msa0034540:CDS
TTCCTTGGACAAAACAATCC+GGG 0.531947 1_1:+62607976 Msa0034540:CDS
ATCAAGTTGAAGAAGAAGAC+TGG 0.532198 1_1:-62606596 None:intergenic
AGGGAATTTCAGATTCATGA+TGG 0.533562 1_1:+62602626 Msa0034540:CDS
TTAATGAAGGCCGAGCAATT+GGG 0.534398 1_1:+62606921 Msa0034540:CDS
GCTCTTCTTGGAGATTCCAT+AGG 0.538084 1_1:-62604176 None:intergenic
AAATTTGGATTGGGGCATTG+AGG 0.538502 1_1:+62602827 Msa0034540:CDS
TCAAGTGTTATCTCAGCAAA+CGG 0.542313 1_1:+62605857 Msa0034540:CDS
AAACTTAAATTCTGTTGATG+TGG 0.542595 1_1:+62607561 Msa0034540:CDS
TCTTCTATTGATGCAACCGC+AGG 0.544570 1_1:+62608958 Msa0034540:CDS
GTTGCTTCCATCAAAATGGC+TGG 0.546096 1_1:+62609203 Msa0034540:CDS
AACTCATGCAAAGGAGTCAT+CGG 0.547287 1_1:-62603431 None:intergenic
TCGTCTTTGTACTTCTGACT+TGG 0.549047 1_1:-62605218 None:intergenic
GTCTGGACAATTAAACCTGA+CGG 0.549630 1_1:+62608330 Msa0034540:CDS
GGAAATAGCAAGATTGTGGA+AGG 0.549642 1_1:+62605406 Msa0034540:CDS
ATTTCTTGTATATCTTCAGA+TGG 0.549819 1_1:+62606546 Msa0034540:CDS
ACATACCATAACTTCTTCAT+CGG 0.552363 1_1:-62604348 None:intergenic
ATCATCACTATGGTGTGCTA+AGG 0.553923 1_1:+62603865 Msa0034540:CDS
ACTTGTGATGTAAGGTGTCA+AGG 0.556820 1_1:-62605339 None:intergenic
TTACAGATAATCAAGGATGA+AGG 0.557831 1_1:+62606502 Msa0034540:CDS
ACTTAAGAATGGTTTGGCCG+AGG 0.558171 1_1:+62605631 Msa0034540:CDS
CCTACAATTGAACTCATATG+TGG 0.558907 1_1:-62603134 None:intergenic
TTGAGTGCATAGCTCTAACC+TGG 0.559477 1_1:-62603558 None:intergenic
TTCACTTTCCTCCAAAATGG+TGG 0.559620 1_1:+62609064 Msa0034540:CDS
TTGTTGAAATTGATGAACTT+GGG 0.560378 1_1:-62608557 None:intergenic
TATTGGAAATAGCAAGATTG+TGG 0.564189 1_1:+62605402 Msa0034540:CDS
TATTGATGCAACCGCAGGAA+AGG 0.565080 1_1:+62608963 Msa0034540:CDS
CCATATATTACAGATAATCA+AGG 0.565834 1_1:+62606495 Msa0034540:CDS
GCTGGAAACGATAGCGTGAG+AGG 0.568164 1_1:+62606028 Msa0034540:CDS
CAAATCATCATGAATTTGAA+GGG 0.570384 1_1:-62608920 None:intergenic
AATTGTAGGGTGGTATTCAG+AGG 0.570651 1_1:+62603148 Msa0034540:CDS
TCATTAGCGTCAGATGCTGA+TGG 0.574514 1_1:+62609245 Msa0034540:CDS
CTTTCCTCCAAAATGGTGGT+GGG 0.574925 1_1:+62609068 Msa0034540:CDS
GTACATAGACTTGTGATGTA+AGG 0.575384 1_1:-62605347 None:intergenic
GTCTTGAGTGGACATGCTGA+TGG 0.575944 1_1:+62607759 Msa0034540:CDS
AATGAAAGACTTCAAAGCTA+GGG 0.578058 1_1:-62607340 None:intergenic
GATAAATAAGAATGAATCTG+AGG 0.578842 1_1:-62605443 None:intergenic
ACATGCTGATGGAACTATCA+AGG 0.580912 1_1:+62607770 Msa0034540:CDS
CTGGATCACTTGGATAAGAG+AGG 0.585186 1_1:-62605717 None:intergenic
GTATTAGCAAATTTGGATTG+GGG 0.586875 1_1:+62602819 Msa0034540:CDS
CTGGTGTAAGGGATGTTGCT+CGG 0.587806 1_1:+62607247 Msa0034540:CDS
AGGAACAACCTTCTTGCTTG+AGG 0.589226 1_1:-62603387 None:intergenic
ATAGAGCCTGTCGCGTGATG+GGG 0.589928 1_1:-62605016 None:intergenic
TCAACCATGTGGCAAGAACA+AGG 0.591207 1_1:-62607197 None:intergenic
TCTACCTGATACTGGTGTAA+GGG 0.593881 1_1:+62607236 Msa0034540:CDS
TCTGGACAATTAAACCTGAC+GGG 0.595986 1_1:+62608331 Msa0034540:CDS
TGATTCTACCTCAAGCAAGA+AGG 0.597957 1_1:+62603379 Msa0034540:CDS
ATAATTGAAGAGATTGAAGA+CGG 0.598745 1_1:+62604002 Msa0034540:CDS
ATTCTTGAATTATTTCACGC+TGG 0.599666 1_1:+62606010 Msa0034540:CDS
CTGAATGGTCAGGTCTTGAG+TGG 0.600568 1_1:+62607747 Msa0034540:CDS
CCTCCTAGGTATGGGACGCA+AGG 0.602072 1_1:+62607864 Msa0034540:intron
ATCGGCAGTGAAAATATGAT+CGG 0.602880 1_1:-62604330 None:intergenic
CTACAAATCCTCATATCCGT+AGG 0.604451 1_1:+62604213 Msa0034540:CDS
CGCAAGGAAGAGAATACCAC+GGG 0.605071 1_1:+62607880 Msa0034540:CDS
GACCGGCTCAACTCATGCAA+AGG 0.605362 1_1:-62603440 None:intergenic
AGACACTGATAGAAGCACTT+TGG 0.610151 1_1:+62606760 Msa0034540:CDS
ACAACAAGAAGACCTAATGA+TGG 0.611307 1_1:+62603521 Msa0034540:CDS
TCTTGCTTGAGGTAGAATCA+GGG 0.611423 1_1:-62603376 None:intergenic
ATTTGGACAAAACCGAAGGA+AGG 0.616469 1_1:+62605900 Msa0034540:CDS
TGCTCGGAAATCCCTGCTTG+AGG 0.617396 1_1:+62607263 Msa0034540:CDS
CTATTCTATAGACAGAGTTG+TGG 0.619395 1_1:+62607661 Msa0034540:intron
AACCTGGATCTTTCCATCAG+AGG 0.619691 1_1:-62609288 None:intergenic
AAAGAAAAGCTATTCAAGAG+TGG 0.619754 1_1:+62604970 Msa0034540:CDS
TCTCAAATTCTAATACACCA+AGG 0.621019 1_1:+62605126 Msa0034540:CDS
GGAGAACATGAAGAACCCCT+TGG 0.621224 1_1:-62605143 None:intergenic
AAAGCATCTATAGAATCTTG+AGG 0.624596 1_1:+62607488 Msa0034540:CDS
TTGGACATGTCACTTCCTCA+GGG 0.625627 1_1:+62606838 Msa0034540:CDS
ATTCATGAGTGCCTCAAGCA+GGG 0.629118 1_1:-62607274 None:intergenic
ACGAAAGATGAGCATTTACA+GGG 0.629231 1_1:+62606725 Msa0034540:CDS
AAGAAACAACAGATTTACGA+GGG 0.629920 1_1:+62605253 Msa0034540:CDS
CGAGTTTCTTGAATCACCCG+TGG 0.631437 1_1:-62607896 None:intergenic
AGATTTGAGCTCAAATGGAG+AGG 0.632812 1_1:+62607707 Msa0034540:CDS
CCAGGTTCTTGGATGACTGG+AGG 0.637465 1_1:-62607299 None:intergenic
AAGTATTTGGACAAAACCGA+AGG 0.639236 1_1:+62605896 Msa0034540:CDS
TGGATCACTTGGATAAGAGA+GGG 0.639894 1_1:-62605716 None:intergenic
AGATGTTTATGACGTTAAGG+AGG 0.640877 1_1:+62608365 Msa0034540:CDS
TGAGCATTATGATGCATCTG+TGG 0.642057 1_1:+62604034 Msa0034540:CDS
TCAAATTCTAATACACCAAG+GGG 0.645386 1_1:+62605128 Msa0034540:CDS
TTACAAAATCAGGAACAGAC+CGG 0.646189 1_1:-62603457 None:intergenic
TCTGGGGACAAACTGTACTG+TGG 0.649171 1_1:+62608602 Msa0034540:CDS
ATGGTTTAAATGAAACAACC+AGG 0.654361 1_1:+62603540 Msa0034540:CDS
AGATTTACGAGGGTTTCTGT+CGG 0.656004 1_1:+62605263 Msa0034540:CDS
AAAATGCCTTGCTGTTTCTG+GGG 0.657219 1_1:+62608586 Msa0034540:CDS
TTGCTCAAGAATTGCTATGG+CGG 0.661876 1_1:-62605792 None:intergenic
CACTGTTGATGGCTACACGA+TGG 0.664596 1_1:-62609115 None:intergenic
AAATTCCAACCATTCAAAGG+GGG 0.666255 1_1:+62603838 Msa0034540:CDS
AGTCATTAGATGAGAACACA+AGG 0.670806 1_1:+62603321 Msa0034540:CDS
GTTTGTCCCCAGAAACAGCA+AGG 0.671971 1_1:-62608592 None:intergenic
AGTGATCCAGAACAAAAGTG+AGG 0.673318 1_1:+62605730 Msa0034540:CDS
GCTTCCATCAAAATGGCTGG+TGG 0.681093 1_1:+62609206 Msa0034540:CDS
CAAATTCCAACCATTCAAAG+GGG 0.681835 1_1:+62603837 Msa0034540:CDS
ATATGAGTTCAATTGTAGGG+TGG 0.696022 1_1:+62603138 Msa0034540:CDS
TCATGCAAAGGAGTCATCGG+CGG 0.699881 1_1:-62603428 None:intergenic
AAAGAAACAACAGATTTACG+AGG 0.712333 1_1:+62605252 Msa0034540:CDS
ACAGACATATACCTTTCCTG+CGG 0.724473 1_1:-62608974 None:intergenic
AAACACCGACAAAGAAACTG+AGG 0.730795 1_1:+62602776 Msa0034540:CDS
ACGCAAGGAAGAGAATACCA+CGG 0.733007 1_1:+62607879 Msa0034540:CDS
CCAGTCATCCAAGAACCTGG+AGG 0.734932 1_1:+62607302 Msa0034540:CDS
TTCAGTATATGACTTCCCTG+AGG 0.736161 1_1:-62606853 None:intergenic
CTCTGCAAAAGACATCACAA+TGG 0.738618 1_1:+62605166 Msa0034540:CDS
TAGCGTGAGAGGAATCTGTG+TGG 0.750564 1_1:+62606039 Msa0034540:CDS
GAGCATGTGTGTCAACCATG+TGG 0.762737 1_1:-62607208 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATATAACTTTTGATTAA+TGG + chr1_1:62603923-62603942 Msa0034540:intron 10.0%
!!! AAAAAAAAAGTATATGTATA+TGG - chr1_1:62604451-62604470 None:intergenic 10.0%
!!! ATTTATTTTTTTGTGAAAAA+TGG - chr1_1:62606299-62606318 None:intergenic 10.0%
!! AAAAACAAAAATACTAAAAT+TGG - chr1_1:62606448-62606467 None:intergenic 10.0%
!! AAAAAATAAATCGTATTAGA+TGG + chr1_1:62606308-62606327 Msa0034540:intron 15.0%
!! AAAAATAAATCGTATTAGAT+GGG + chr1_1:62606309-62606328 Msa0034540:intron 15.0%
!! TACTAGATGTAAATATTATA+CGG + chr1_1:62607385-62607404 Msa0034540:intron 15.0%
!!! TTATCAATTTTATCTTATGA+TGG - chr1_1:62608500-62608519 None:intergenic 15.0%
!! AGCTATTAATACCTATAATA+TGG + chr1_1:62602860-62602879 Msa0034540:CDS 20.0%
!! AAATTCATATTTATCAGCTT+GGG + chr1_1:62602971-62602990 Msa0034540:CDS 20.0%
!! ATTTGAATCTATCCTATTTA+TGG + chr1_1:62602997-62603016 Msa0034540:CDS 20.0%
!!! AAAAAGAATCAAAGTTTTTG+CGG + chr1_1:62604237-62604256 Msa0034540:CDS 20.0%
!! TCAACTATATAACAGTTATT+TGG + chr1_1:62604551-62604570 Msa0034540:intron 20.0%
!! CAACTATATAACAGTTATTT+GGG + chr1_1:62604552-62604571 Msa0034540:intron 20.0%
!!! TTCAAAACATAGTTTGTTTT+TGG - chr1_1:62605056-62605075 None:intergenic 20.0%
!!! ATTCTTGAGCAAATTTTAAT+AGG + chr1_1:62605803-62605822 Msa0034540:CDS 20.0%
!!! TTTTCACCTTGTTTAATATT+TGG + chr1_1:62606154-62606173 Msa0034540:intron 20.0%
!! ATATCTCCAAATATTAAACA+AGG - chr1_1:62606163-62606182 None:intergenic 20.0%
!! TTCTCAAATGAATGATAATA+TGG - chr1_1:62606225-62606244 None:intergenic 20.0%
!! TGCTTAATAGGAAAATATTT+AGG - chr1_1:62606374-62606393 None:intergenic 20.0%
!!! TACTTTTTTTCTTAACATGT+GGG - chr1_1:62606400-62606419 None:intergenic 20.0%
!! AAAAATACTAAAATTGGTGT+TGG - chr1_1:62606442-62606461 None:intergenic 20.0%
!!! TGTTTTTATGATTATACAGA+AGG + chr1_1:62606461-62606480 Msa0034540:intron 20.0%
!! AACAATAAATTCATCTAACA+AGG - chr1_1:62606633-62606652 None:intergenic 20.0%
!! CAAGAACAAAAAATAAATTG+AGG - chr1_1:62606684-62606703 None:intergenic 20.0%
!!! AATACAAACTTTTCTTACAT+AGG + chr1_1:62607041-62607060 Msa0034540:intron 20.0%
!! ACTAGATGTAAATATTATAC+GGG + chr1_1:62607386-62607405 Msa0034540:intron 20.0%
!!! AACAGAATTTAAGTTTAGTA+AGG - chr1_1:62607557-62607576 None:intergenic 20.0%
!! CGTGTAATATATTTATGTTT+AGG + chr1_1:62607618-62607637 Msa0034540:intron 20.0%
!! CAAATAATAGCAACATTAAT+TGG - chr1_1:62608056-62608075 None:intergenic 20.0%
!!! ATTAATGTTGCTATTATTTG+AGG + chr1_1:62608056-62608075 Msa0034540:intron 20.0%
!! TACCAGAATAAACATATAAA+TGG + chr1_1:62608110-62608129 Msa0034540:intron 20.0%
!! TGTATTAAGATTAATCTAGT+GGG - chr1_1:62608274-62608293 None:intergenic 20.0%
!! ATGTATTAAGATTAATCTAG+TGG - chr1_1:62608275-62608294 None:intergenic 20.0%
!!! ATGTAAGAAGTATTATTCAA+TGG - chr1_1:62608306-62608325 None:intergenic 20.0%
!! AATAAATGAAGCAATATAGA+GGG - chr1_1:62608658-62608677 None:intergenic 20.0%
!! TAATAAATGAAGCAATATAG+AGG - chr1_1:62608659-62608678 None:intergenic 20.0%
!! AGAGTTGTATATTATGAAAA+CGG - chr1_1:62608750-62608769 None:intergenic 20.0%
! TAGATAGTTTCATTCAAGAT+AGG + chr1_1:62602685-62602704 Msa0034540:CDS 25.0%
! AGTATTAGCAAATTTGGATT+GGG + chr1_1:62602818-62602837 Msa0034540:CDS 25.0%
! AAGCTTAGTTTCCATATTAT+AGG - chr1_1:62602874-62602893 None:intergenic 25.0%
! CAAGCTGATAAATATGAATT+TGG - chr1_1:62602972-62602991 None:intergenic 25.0%
! CAAATTCATATTTATCAGCT+TGG + chr1_1:62602970-62602989 Msa0034540:CDS 25.0%
! TATCCTATTTATGGAAATTG+AGG + chr1_1:62603006-62603025 Msa0034540:CDS 25.0%
! AAATCAATCCTAGAGAAAAA+AGG - chr1_1:62603083-62603102 None:intergenic 25.0%
! TAAGAAAAATCAGAAGATTC+AGG - chr1_1:62603203-62603222 None:intergenic 25.0%
!! TAAAGTTTTCAATGAGTCTT+TGG + chr1_1:62603238-62603257 Msa0034540:CDS 25.0%
! GTTTCATTTAAACCATCATT+AGG - chr1_1:62603536-62603555 None:intergenic 25.0%
! TATGATAAATTACCTTATGC+AGG + chr1_1:62603974-62603993 Msa0034540:intron 25.0%
! ATAATTGAAGAGATTGAAGA+CGG + chr1_1:62604002-62604021 Msa0034540:CDS 25.0%
!! TTGATATTTTTCTTCGATTC+AGG - chr1_1:62604086-62604105 None:intergenic 25.0%
! TGAATCGAAGAAAAATATCA+AGG + chr1_1:62604085-62604104 Msa0034540:CDS 25.0%
!! GAGAATTCATTTGATTCTTT+TGG - chr1_1:62604145-62604164 None:intergenic 25.0%
!!! ACTTTGATTCTTTTTTCCTA+CGG - chr1_1:62604232-62604251 None:intergenic 25.0%
!! GTTACTATCTAATCGTTTTA+CGG + chr1_1:62604259-62604278 Msa0034540:CDS 25.0%
!! TTACTATCTAATCGTTTTAC+GGG + chr1_1:62604260-62604279 Msa0034540:CDS 25.0%
! CCTATTATTTATTACTAGTC+CGG + chr1_1:62604390-62604409 Msa0034540:intron 25.0%
! TGTTTGCTTATATTTAAGTC+CGG - chr1_1:62604412-62604431 None:intergenic 25.0%
!!! TATTACTCGTAGCTTTTTTA+TGG + chr1_1:62604499-62604518 Msa0034540:intron 25.0%
!! ATAACAGTTATTTGGGATAT+AGG + chr1_1:62604559-62604578 Msa0034540:intron 25.0%
! AGGTCTTGAATAATATTAAG+AGG + chr1_1:62604579-62604598 Msa0034540:intron 25.0%
!! GAGATATTCTTTTATATTCC+AGG + chr1_1:62604689-62604708 Msa0034540:intron 25.0%
!! ATAGTCAGTTTCTCTAATTT+TGG - chr1_1:62604861-62604880 None:intergenic 25.0%
! AAATTAGAGAAACTGACTAT+TGG + chr1_1:62604861-62604880 Msa0034540:CDS 25.0%
!! ATTGGACAAACAAAATCTTT+TGG - chr1_1:62604897-62604916 None:intergenic 25.0%
!! TTGAATAGCTTTTCTTTCAT+AGG - chr1_1:62604967-62604986 None:intergenic 25.0%
! GATAAATAAGAATGAATCTG+AGG - chr1_1:62605446-62605465 None:intergenic 25.0%
!!! TTGAGCAAATTTTAATAGGA+GGG + chr1_1:62605807-62605826 Msa0034540:CDS 25.0%
! AAATGACTGCTTTAATTGAA+GGG - chr1_1:62606125-62606144 None:intergenic 25.0%
! TAAATGACTGCTTTAATTGA+AGG - chr1_1:62606126-62606145 None:intergenic 25.0%
!! CAAAAAGTTAGCATTGAATT+TGG - chr1_1:62606189-62606208 None:intergenic 25.0%
!! CCATTTTACTGTAAACATAA+AGG - chr1_1:62606254-62606273 None:intergenic 25.0%
! CCTTTATGTTTACAGTAAAA+TGG + chr1_1:62606251-62606270 Msa0034540:intron 25.0%
!!! ACTTTTTTTCTTAACATGTG+GGG - chr1_1:62606399-62606418 None:intergenic 25.0%
!!! GTACTTTTTTTCTTAACATG+TGG - chr1_1:62606401-62606420 None:intergenic 25.0%
! CCTTGATTATCTGTAATATA+TGG - chr1_1:62606498-62606517 None:intergenic 25.0%
! CCATATATTACAGATAATCA+AGG + chr1_1:62606495-62606514 Msa0034540:CDS 25.0%
! ATTTCTTGTATATCTTCAGA+TGG + chr1_1:62606546-62606565 Msa0034540:CDS 25.0%
! CTTCTCAAATAATCAAATGA+AGG + chr1_1:62606791-62606810 Msa0034540:CDS 25.0%
!! GATGCTTTACTATTTCTTAT+TGG + chr1_1:62606819-62606838 Msa0034540:CDS 25.0%
!!! ACCTTACAATGTTTTAATGA+AGG + chr1_1:62606908-62606927 Msa0034540:CDS 25.0%
! TCTAGTATAAAAAACCTACT+TGG - chr1_1:62607372-62607391 None:intergenic 25.0%
! GAGTACACTAAATGAAAAAA+TGG + chr1_1:62607425-62607444 Msa0034540:intron 25.0%
! AAACTTAAATTCTGTTGATG+TGG + chr1_1:62607561-62607580 Msa0034540:CDS 25.0%
! TGCTATGTCATAGAAAAAAT+TGG + chr1_1:62608009-62608028 Msa0034540:intron 25.0%
! AGCCATTTATATGTTTATTC+TGG - chr1_1:62608115-62608134 None:intergenic 25.0%
! GAATAATACTTCTTACATAC+AGG + chr1_1:62608308-62608327 Msa0034540:intron 25.0%
! TATAGATGTTTATGACGTTA+AGG + chr1_1:62608362-62608381 Msa0034540:CDS 25.0%
! TGATAAAATTTGACGTTTAC+AGG + chr1_1:62608514-62608533 Msa0034540:intron 25.0%
! TTGTTGAAATTGATGAACTT+GGG - chr1_1:62608560-62608579 None:intergenic 25.0%
! TTTGTTGAAATTGATGAACT+TGG - chr1_1:62608561-62608580 None:intergenic 25.0%
!!! CTATGTTTTTTAAGACTTAC+CGG + chr1_1:62608804-62608823 Msa0034540:intron 25.0%
! CAAATCATCATGAATTTGAA+GGG - chr1_1:62608923-62608942 None:intergenic 25.0%
! AAATATCTTGCATCAATTGA+AGG - chr1_1:62609045-62609064 None:intergenic 25.0%
! CAAGAGAAAATTCAGTTAAT+GGG - chr1_1:62609365-62609384 None:intergenic 25.0%
TCAAGCAGTATTAGCAAATT+TGG + chr1_1:62602812-62602831 Msa0034540:CDS 30.0%
CAGTATTAGCAAATTTGGAT+TGG + chr1_1:62602817-62602836 Msa0034540:CDS 30.0%
GTATTAGCAAATTTGGATTG+GGG + chr1_1:62602819-62602838 Msa0034540:CDS 30.0%
GTTCCTCAATTTCCATAAAT+AGG - chr1_1:62603012-62603031 None:intergenic 30.0%
GAGTTGTATTTATCATTCTC+TGG + chr1_1:62603040-62603059 Msa0034540:CDS 30.0%
!!! TTGTTGATCCTTTTTTCTCT+AGG + chr1_1:62603072-62603091 Msa0034540:CDS 30.0%
! TTGATTTTGCTCCTGAATTA+TGG + chr1_1:62603096-62603115 Msa0034540:CDS 30.0%
! AACAGGTTTTTCCATAATTC+AGG - chr1_1:62603110-62603129 None:intergenic 30.0%
CACATATGAGTTCAATTGTA+GGG + chr1_1:62603135-62603154 Msa0034540:CDS 30.0%
! AGTCTTTGGTATTTTCTATG+AGG + chr1_1:62603252-62603271 Msa0034540:CDS 30.0%
! GTTCCTGATTTTGTAAAGTT+TGG + chr1_1:62603464-62603483 Msa0034540:CDS 30.0%
ATAGAAAATCCAGAACTCTT+GGG - chr1_1:62603500-62603519 None:intergenic 30.0%
ATGGTTTAAATGAAACAACC+AGG + chr1_1:62603540-62603559 Msa0034540:CDS 30.0%
CAAACGTACATACAAGAATT+AGG - chr1_1:62603785-62603804 None:intergenic 30.0%
CTAATTCTTGTATGTACGTT+TGG + chr1_1:62603783-62603802 Msa0034540:intron 30.0%
TTCAAATTCCAACCATTCAA+AGG + chr1_1:62603835-62603854 Msa0034540:CDS 30.0%
TCAAATTCCAACCATTCAAA+GGG + chr1_1:62603836-62603855 Msa0034540:CDS 30.0%
TTAGAGTAGCACATTCATAT+AGG + chr1_1:62603948-62603967 Msa0034540:intron 30.0%
! TGGTTTGATCGATATACTTT+TGG - chr1_1:62604125-62604144 None:intergenic 30.0%
GATTCCATAGGAGATATATT+GGG - chr1_1:62604167-62604186 None:intergenic 30.0%
AGATTCCATAGGAGATATAT+TGG - chr1_1:62604168-62604187 None:intergenic 30.0%
ACATACCATAACTTCTTCAT+CGG - chr1_1:62604351-62604370 None:intergenic 30.0%
!! CCGGACTAGTAATAAATAAT+AGG - chr1_1:62604393-62604412 None:intergenic 30.0%
TCATTGTCTTGATTCATACT+TGG - chr1_1:62604623-62604642 None:intergenic 30.0%
GATAACTATAAAGAGAATCC+TGG - chr1_1:62604710-62604729 None:intergenic 30.0%
TATAGTTATCATGCTACTGT+TGG + chr1_1:62604720-62604739 Msa0034540:intron 30.0%
ATAGTTATCATGCTACTGTT+GGG + chr1_1:62604721-62604740 Msa0034540:intron 30.0%
! TAGCTTTTCTTTCATAGGTT+TGG - chr1_1:62604962-62604981 None:intergenic 30.0%
AAAGAAAAGCTATTCAAGAG+TGG + chr1_1:62604970-62604989 Msa0034540:CDS 30.0%
!!! TGTTTTTGGTAAGATGTTTG+CGG - chr1_1:62605042-62605061 None:intergenic 30.0%
! TGAAGAGATTGATAGTATCA+TGG + chr1_1:62605072-62605091 Msa0034540:CDS 30.0%
TCTCAAATTCTAATACACCA+AGG + chr1_1:62605126-62605145 Msa0034540:CDS 30.0%
CTCAAATTCTAATACACCAA+GGG + chr1_1:62605127-62605146 Msa0034540:CDS 30.0%
TCAAATTCTAATACACCAAG+GGG + chr1_1:62605128-62605147 Msa0034540:CDS 30.0%
AAAGAAACAACAGATTTACG+AGG + chr1_1:62605252-62605271 Msa0034540:CDS 30.0%
AAGAAACAACAGATTTACGA+GGG + chr1_1:62605253-62605272 Msa0034540:CDS 30.0%
TATTGGAAATAGCAAGATTG+TGG + chr1_1:62605402-62605421 Msa0034540:CDS 30.0%
! ATCTTTTCAGATGAAAGAGT+TGG + chr1_1:62605560-62605579 Msa0034540:CDS 30.0%
! TATGCTACTTAAGAATGGTT+TGG + chr1_1:62605625-62605644 Msa0034540:CDS 30.0%
CACTACTTATTTACCAACTA+AGG + chr1_1:62605657-62605676 Msa0034540:CDS 30.0%
! AATTTGCTCAAGAATTGCTA+TGG - chr1_1:62605798-62605817 None:intergenic 30.0%
!! CTTGAGCAAATTTTAATAGG+AGG + chr1_1:62605806-62605825 Msa0034540:CDS 30.0%
!! TGAGCAAATTTTAATAGGAG+GGG + chr1_1:62605808-62605827 Msa0034540:CDS 30.0%
TTTGTCCAAATACTTGACTA+TGG - chr1_1:62605891-62605910 None:intergenic 30.0%
! CACAAAAGTATGGAAATTAC+AGG - chr1_1:62605929-62605948 None:intergenic 30.0%
GCGTGAAATAATTCAAGAAT+GGG - chr1_1:62606010-62606029 None:intergenic 30.0%
AGCGTGAAATAATTCAAGAA+TGG - chr1_1:62606011-62606030 None:intergenic 30.0%
ATTCTTGAATTATTTCACGC+TGG + chr1_1:62606010-62606029 Msa0034540:CDS 30.0%
! TTTTCATATCACTCAGCAAT+AGG + chr1_1:62606344-62606363 Msa0034540:intron 30.0%
TATCTGTAATATATGGTTGC+TGG - chr1_1:62606491-62606510 None:intergenic 30.0%
TTACAGATAATCAAGGATGA+AGG + chr1_1:62606502-62606521 Msa0034540:CDS 30.0%
GCCTTCATTAAAACATTGTA+AGG - chr1_1:62606912-62606931 None:intergenic 30.0%
CAATGATTTCATGGAAACAA+TGG + chr1_1:62606953-62606972 Msa0034540:CDS 30.0%
! ACAAACTTTTCTTACATAGG+AGG + chr1_1:62607044-62607063 Msa0034540:intron 30.0%
AAAAAAACGCCATGAAATCT+TGG + chr1_1:62607070-62607089 Msa0034540:CDS 30.0%
GTACTTTGCAATCATGAAAA+CGG + chr1_1:62607111-62607130 Msa0034540:CDS 30.0%
! TCTTTAAGGAGTTACTCTTT+AGG - chr1_1:62607164-62607183 None:intergenic 30.0%
AAAGAGTAACTCCTTAAAGA+TGG + chr1_1:62607164-62607183 Msa0034540:CDS 30.0%
AATGAAAGACTTCAAAGCTA+GGG - chr1_1:62607343-62607362 None:intergenic 30.0%
TAATGAAAGACTTCAAAGCT+AGG - chr1_1:62607344-62607363 None:intergenic 30.0%
! AAAGCATCTATAGAATCTTG+AGG + chr1_1:62607488-62607507 Msa0034540:CDS 30.0%
CTTTCTTTGCATTATCTGAA+TGG + chr1_1:62607732-62607751 Msa0034540:CDS 30.0%
TAACAGTATAAATTCCTCCT+AGG + chr1_1:62607850-62607869 Msa0034540:intron 30.0%
TATAAATTCCTCCTAGGTAT+GGG + chr1_1:62607856-62607875 Msa0034540:intron 30.0%
TGGTATGCACAACAAAATAT+TGG - chr1_1:62608036-62608055 None:intergenic 30.0%
ACAAAAAGATGCAGGTAATT+TGG - chr1_1:62608248-62608267 None:intergenic 30.0%
GAATTGTTCAGCAACATATA+AGG - chr1_1:62608461-62608480 None:intergenic 30.0%
ATGTTGCTGAACAATTCATA+AGG + chr1_1:62608464-62608483 Msa0034540:intron 30.0%
! GACGTTTACAGGTTTTTAAT+TGG + chr1_1:62608525-62608544 Msa0034540:intron 30.0%
ATGAAAACGGAAAGAACATA+TGG - chr1_1:62608737-62608756 None:intergenic 30.0%
AAAACATACATAAGCTTCTC+TGG + chr1_1:62608774-62608793 Msa0034540:intron 30.0%
GAATGAAGTAGATGTATGTT+TGG - chr1_1:62608857-62608876 None:intergenic 30.0%
GCAAATCATCATGAATTTGA+AGG - chr1_1:62608924-62608943 None:intergenic 30.0%
! ATTTTCACTTTCCTCCAAAA+TGG + chr1_1:62609061-62609080 Msa0034540:CDS 30.0%
AAATATGAAGTCACTGTTGA+TGG - chr1_1:62609129-62609148 None:intergenic 30.0%
! ATATTTGCTGGTACGAAATT+TGG + chr1_1:62609143-62609162 Msa0034540:CDS 30.0%
! ATCTTTTAGCCAAACTTCAA+TGG - chr1_1:62609171-62609190 None:intergenic 30.0%
CCAAGAGAAAATTCAGTTAA+TGG - chr1_1:62609366-62609385 None:intergenic 30.0%
! CCATTAACTGAATTTTCTCT+TGG + chr1_1:62609363-62609382 Msa0034540:intron 30.0%
AGGGAATTTCAGATTCATGA+TGG + chr1_1:62602626-62602645 Msa0034540:CDS 35.0%
TTCTACCTCAGTTTCTTTGT+CGG - chr1_1:62602784-62602803 None:intergenic 35.0%
AATCCTAAGCAAAAAACTGC+TGG + chr1_1:62602942-62602961 Msa0034540:CDS 35.0%
AACTCATATGTGGAAGAAAC+AGG - chr1_1:62603127-62603146 None:intergenic 35.0%
CCTACAATTGAACTCATATG+TGG - chr1_1:62603137-62603156 None:intergenic 35.0%
CCACATATGAGTTCAATTGT+AGG + chr1_1:62603134-62603153 Msa0034540:CDS 35.0%
ATATGAGTTCAATTGTAGGG+TGG + chr1_1:62603138-62603157 Msa0034540:CDS 35.0%
TGCAATTTCTCAAGCTGATT+TGG - chr1_1:62603278-62603297 None:intergenic 35.0%
CAAAAACTTGAGCAGCTTTA+TGG + chr1_1:62603296-62603315 Msa0034540:CDS 35.0%
AGTCATTAGATGAGAACACA+AGG + chr1_1:62603321-62603340 Msa0034540:CDS 35.0%
TTACAAAATCAGGAACAGAC+CGG - chr1_1:62603460-62603479 None:intergenic 35.0%
GGACCAAACTTTACAAAATC+AGG - chr1_1:62603470-62603489 None:intergenic 35.0%
CATAGAAAATCCAGAACTCT+TGG - chr1_1:62603501-62603520 None:intergenic 35.0%
ACAACAAGAAGACCTAATGA+TGG + chr1_1:62603521-62603540 Msa0034540:CDS 35.0%
GCACTCAAACTTTGAATTCT+TGG + chr1_1:62603573-62603592 Msa0034540:CDS 35.0%
ATGATTCAGTGCCAAAAACT+TGG + chr1_1:62603719-62603738 Msa0034540:intron 35.0%
! ACTTTCTTGAGCCAAGTTTT+TGG - chr1_1:62603733-62603752 None:intergenic 35.0%
ACGTACATACAAGAATTAGG+AGG - chr1_1:62603782-62603801 None:intergenic 35.0%
CAAATTCCAACCATTCAAAG+GGG + chr1_1:62603837-62603856 Msa0034540:CDS 35.0%
AAATTCCAACCATTCAAAGG+GGG + chr1_1:62603838-62603857 Msa0034540:CDS 35.0%
TTCTCCCAATATATCTCCTA+TGG + chr1_1:62604160-62604179 Msa0034540:CDS 35.0%
! GAGTTATTTGAAGCTCTTCT+TGG - chr1_1:62604191-62604210 None:intergenic 35.0%
!!! TCTTTTTTCCTACGGATATG+AGG - chr1_1:62604224-62604243 None:intergenic 35.0%
ATCGGCAGTGAAAATATGAT+CGG - chr1_1:62604333-62604352 None:intergenic 35.0%
AGCAAACAAATGCATGTATC+TGG + chr1_1:62604424-62604443 Msa0034540:intron 35.0%
!!! TTGCTTATTTTGAAGCCTAG+AGG + chr1_1:62604469-62604488 Msa0034540:intron 35.0%
!!! TGCTTATTTTGAAGCCTAGA+GGG + chr1_1:62604470-62604489 Msa0034540:intron 35.0%
!!! ACTCGTAGCTTTTTTATGGT+TGG + chr1_1:62604503-62604522 Msa0034540:intron 35.0%
TCAAGACAATGAGAATAGTC+TGG + chr1_1:62604631-62604650 Msa0034540:CDS 35.0%
GGCAAAGAAAGTTGAACATT+AGG - chr1_1:62604777-62604796 None:intergenic 35.0%
TGTGAACTGCAAACTCAAAA+GGG - chr1_1:62604798-62604817 None:intergenic 35.0%
ATGTGAACTGCAAACTCAAA+AGG - chr1_1:62604799-62604818 None:intergenic 35.0%
TCACATTGTGAAAGTGAAGA+TGG + chr1_1:62604813-62604832 Msa0034540:CDS 35.0%
! GGACAAACAAAATCTTTTGG+TGG - chr1_1:62604894-62604913 None:intergenic 35.0%
!! GATTTTGTTTGTCCAATCAC+AGG + chr1_1:62604900-62604919 Msa0034540:CDS 35.0%
CTAAATATCTGACCTGTGAT+TGG - chr1_1:62604915-62604934 None:intergenic 35.0%
! ATTGTGATGTCTTTTGCAGA+GGG - chr1_1:62605167-62605186 None:intergenic 35.0%
GTACATAGACTTGTGATGTA+AGG - chr1_1:62605350-62605369 None:intergenic 35.0%
ATGTACATCAGAAAACTTGC+AGG + chr1_1:62605364-62605383 Msa0034540:CDS 35.0%
!!! AGACTCTGATTTTGATTGCT+TGG + chr1_1:62605601-62605620 Msa0034540:CDS 35.0%
! TTGGCTATGCTACTTAAGAA+TGG + chr1_1:62605620-62605639 Msa0034540:CDS 35.0%
!! CTATATCCTCACTTTTGTTC+TGG - chr1_1:62605739-62605758 None:intergenic 35.0%
TAGGAGGGGATGAATATAAT+AGG + chr1_1:62605822-62605841 Msa0034540:CDS 35.0%
TCAAGTGTTATCTCAGCAAA+CGG + chr1_1:62605857-62605876 Msa0034540:CDS 35.0%
AAGTATTTGGACAAAACCGA+AGG + chr1_1:62605896-62605915 Msa0034540:CDS 35.0%
TTGCATGCAACACAAAAGTA+TGG - chr1_1:62605939-62605958 None:intergenic 35.0%
ACTGCTTTAATTGAAGGGAA+AGG - chr1_1:62606120-62606139 None:intergenic 35.0%
ACAGCAATTTGATGTTCCAT+TGG - chr1_1:62606574-62606593 None:intergenic 35.0%
!! ATCAAGTTGAAGAAGAAGAC+TGG - chr1_1:62606599-62606618 None:intergenic 35.0%
ACGAAAGATGAGCATTTACA+GGG + chr1_1:62606725-62606744 Msa0034540:CDS 35.0%
ACACTCTGACAATGATTTCA+TGG + chr1_1:62606944-62606963 Msa0034540:CDS 35.0%
TTCATGGAAACAATGGTTTG+AGG + chr1_1:62606960-62606979 Msa0034540:intron 35.0%
AACAATGGTTTGAGGATATG+TGG + chr1_1:62606968-62606987 Msa0034540:intron 35.0%
CATGAAATCTTGGCAGAAAA+GGG + chr1_1:62607080-62607099 Msa0034540:CDS 35.0%
CGGTTCAATATTTCAAGCTT+TGG + chr1_1:62607131-62607150 Msa0034540:CDS 35.0%
! GCAAGATTTTGCCATCTTTA+AGG - chr1_1:62607178-62607197 None:intergenic 35.0%
CTTTCATTAGTGATCCAAGT+AGG + chr1_1:62607355-62607374 Msa0034540:intron 35.0%
TACGGGTCTTTATCATACAA+AGG + chr1_1:62607403-62607422 Msa0034540:intron 35.0%
AATTCTGTTGATGTGGTAAG+TGG + chr1_1:62607568-62607587 Msa0034540:intron 35.0%
CTATTCTATAGACAGAGTTG+TGG + chr1_1:62607661-62607680 Msa0034540:intron 35.0%
GAGTTAGATTTGAGCTCAAA+TGG + chr1_1:62607702-62607721 Msa0034540:CDS 35.0%
TTTGCATTATCTGAATGGTC+AGG + chr1_1:62607737-62607756 Msa0034540:CDS 35.0%
GTATAAATTCCTCCTAGGTA+TGG + chr1_1:62607855-62607874 Msa0034540:intron 35.0%
TAAACTCTACAGTTCTTCCT+TGG + chr1_1:62607961-62607980 Msa0034540:CDS 35.0%
! TGCTATTATTTGAGGTGATG+AGG + chr1_1:62608064-62608083 Msa0034540:intron 35.0%
ATACTTCTTACATACAGGTC+TGG + chr1_1:62608313-62608332 Msa0034540:intron 35.0%
TCTATACATTTAATCCCGTC+AGG - chr1_1:62608348-62608367 None:intergenic 35.0%
AGATGTTTATGACGTTAAGG+AGG + chr1_1:62608365-62608384 Msa0034540:CDS 35.0%
!!! ATAGCATGCCATTTTAGCAT+TGG - chr1_1:62608409-62608428 None:intergenic 35.0%
ATGCTATGTAACTCAAGGAA+CGG + chr1_1:62608422-62608441 Msa0034540:intron 35.0%
!! TAAAATGCCTTGCTGTTTCT+GGG + chr1_1:62608585-62608604 Msa0034540:CDS 35.0%
ACATCTACTTCATTCTTCAC+TGG + chr1_1:62608862-62608881 Msa0034540:CDS 35.0%
ACTGGTACCAGAAAATTGTT+GGG + chr1_1:62608880-62608899 Msa0034540:CDS 35.0%
! TTGCTTTCCCAACAATTTTC+TGG - chr1_1:62608890-62608909 None:intergenic 35.0%
! ATGAATTTGAAGGGAGTGTA+TGG - chr1_1:62608914-62608933 None:intergenic 35.0%
AACAGTGACTTCATATTTGC+TGG + chr1_1:62609131-62609150 Msa0034540:CDS 35.0%
AATTTGGCACCATTGAAGTT+TGG + chr1_1:62609159-62609178 Msa0034540:CDS 35.0%
!! GATGGAATGATGCTTTTTGT+TGG + chr1_1:62609263-62609282 Msa0034540:CDS 35.0%
!! CTGGTTAGTTTGTGATATCA+TGG - chr1_1:62609335-62609354 None:intergenic 35.0%
!! CAGATTCATGATGGATCAGA+AGG + chr1_1:62602635-62602654 Msa0034540:CDS 40.0%
AAACACCGACAAAGAAACTG+AGG + chr1_1:62602776-62602795 Msa0034540:CDS 40.0%
!! AAATTTGGATTGGGGCATTG+AGG + chr1_1:62602827-62602846 Msa0034540:CDS 40.0%
!!! ACTCCAGCAGTTTTTTGCTT+AGG - chr1_1:62602948-62602967 None:intergenic 40.0%
AATTGTAGGGTGGTATTCAG+AGG + chr1_1:62603148-62603167 Msa0034540:CDS 40.0%
GGAGAGACATAAGCTTATGA+TGG + chr1_1:62603169-62603188 Msa0034540:CDS 40.0%
TCTTGCTTGAGGTAGAATCA+GGG - chr1_1:62603379-62603398 None:intergenic 40.0%
TTCTTGCTTGAGGTAGAATC+AGG - chr1_1:62603380-62603399 None:intergenic 40.0%
TGATTCTACCTCAAGCAAGA+AGG + chr1_1:62603379-62603398 Msa0034540:CDS 40.0%
TGTTCCTATGTTGCCAATTG+CGG + chr1_1:62603403-62603422 Msa0034540:CDS 40.0%
AACTCATGCAAAGGAGTCAT+CGG - chr1_1:62603434-62603453 None:intergenic 40.0%
CTGTGAGTCTCAAAGAACTT+CGG + chr1_1:62603599-62603618 Msa0034540:intron 40.0%
TGTGAGTCTCAAAGAACTTC+GGG + chr1_1:62603600-62603619 Msa0034540:intron 40.0%
ATGATTGTTCCCCCTTTGAA+TGG - chr1_1:62603850-62603869 None:intergenic 40.0%
ATCATCACTATGGTGTGCTA+AGG + chr1_1:62603865-62603884 Msa0034540:CDS 40.0%
CAATTATGCTCTCCTGCATA+AGG - chr1_1:62603989-62604008 None:intergenic 40.0%
TGAAGAGATTGAAGACGGTT+CGG + chr1_1:62604007-62604026 Msa0034540:CDS 40.0%
TGAGCATTATGATGCATCTG+TGG + chr1_1:62604034-62604053 Msa0034540:CDS 40.0%
CTACAAATCCTCATATCCGT+AGG + chr1_1:62604213-62604232 Msa0034540:CDS 40.0%
GAGTAATACATACTCCCTCT+AGG - chr1_1:62604487-62604506 None:intergenic 40.0%
!!! CGTAGCTTTTTTATGGTTGG+TGG + chr1_1:62604506-62604525 Msa0034540:intron 40.0%
ATAGGTTTGGCCTGTTTCAA+GGG - chr1_1:62604949-62604968 None:intergenic 40.0%
AAAGCTATTCAAGAGTGGCT+TGG + chr1_1:62604975-62604994 Msa0034540:CDS 40.0%
GAGAATTCTTGAGCTAGTTC+AGG - chr1_1:62605110-62605129 None:intergenic 40.0%
! CATTGTGATGTCTTTTGCAG+AGG - chr1_1:62605168-62605187 None:intergenic 40.0%
CTCTGCAAAAGACATCACAA+TGG + chr1_1:62605166-62605185 Msa0034540:CDS 40.0%
TCGTCTTTGTACTTCTGACT+TGG - chr1_1:62605221-62605240 None:intergenic 40.0%
AGATTTACGAGGGTTTCTGT+CGG + chr1_1:62605263-62605282 Msa0034540:CDS 40.0%
! ACTTGTGATGTAAGGTGTCA+AGG - chr1_1:62605342-62605361 None:intergenic 40.0%
GGAAATAGCAAGATTGTGGA+AGG + chr1_1:62605406-62605425 Msa0034540:CDS 40.0%
ACTAAACCACTTACGACTGT+TGG - chr1_1:62605473-62605492 None:intergenic 40.0%
GTAAATAAGTAGTGCAGCCT+CGG - chr1_1:62605651-62605670 None:intergenic 40.0%
TCTGAAAGCTGAGCAAAAAC+TGG - chr1_1:62605683-62605702 None:intergenic 40.0%
TGGATCACTTGGATAAGAGA+GGG - chr1_1:62605719-62605738 None:intergenic 40.0%
!! CACTTTTGTTCTGGATCACT+TGG - chr1_1:62605730-62605749 None:intergenic 40.0%
AGTGATCCAGAACAAAAGTG+AGG + chr1_1:62605730-62605749 Msa0034540:CDS 40.0%
TTGCTCAAGAATTGCTATGG+CGG - chr1_1:62605795-62605814 None:intergenic 40.0%
TCCAGCCATAGTCAAGTATT+TGG + chr1_1:62605883-62605902 Msa0034540:CDS 40.0%
TCCAAATACTTGACTATGGC+TGG - chr1_1:62605887-62605906 None:intergenic 40.0%
ATTTGGACAAAACCGAAGGA+AGG + chr1_1:62605900-62605919 Msa0034540:CDS 40.0%
AATTACAGGTCTCCTTCCTT+CGG - chr1_1:62605915-62605934 None:intergenic 40.0%
!! CAGAACTGGTTCGATTGAAT+AGG + chr1_1:62606071-62606090 Msa0034540:CDS 40.0%
!! ACTAAAATTGGTGTTGGACG+AGG - chr1_1:62606436-62606455 None:intergenic 40.0%
ATATCTTCAGATGGCTCCAA+TGG + chr1_1:62606555-62606574 Msa0034540:CDS 40.0%
CTGTAAATGCTCATCTTTCG+TGG - chr1_1:62606726-62606745 None:intergenic 40.0%
CACGAAAGATGAGCATTTAC+AGG + chr1_1:62606724-62606743 Msa0034540:CDS 40.0%
!! AGACACTGATAGAAGCACTT+TGG + chr1_1:62606760-62606779 Msa0034540:CDS 40.0%
!! GATAGAAGCACTTTGGCAAA+AGG + chr1_1:62606767-62606786 Msa0034540:CDS 40.0%
TTCAGTATATGACTTCCCTG+AGG - chr1_1:62606856-62606875 None:intergenic 40.0%
TTTAATGAAGGCCGAGCAAT+TGG + chr1_1:62606920-62606939 Msa0034540:CDS 40.0%
TTAATGAAGGCCGAGCAATT+GGG + chr1_1:62606921-62606940 Msa0034540:CDS 40.0%
! CCTTTTCTGCCAAGATTTCA+TGG - chr1_1:62607082-62607101 None:intergenic 40.0%
CCATGAAATCTTGGCAGAAA+AGG + chr1_1:62607079-62607098 Msa0034540:CDS 40.0%
CTCTTTACTCTACCTGATAC+TGG + chr1_1:62607228-62607247 Msa0034540:CDS 40.0%
TCTACCTGATACTGGTGTAA+GGG + chr1_1:62607236-62607255 Msa0034540:CDS 40.0%
GGTAAGTGGAGTAGTGATTA+AGG + chr1_1:62607582-62607601 Msa0034540:intron 40.0%
AGATTTGAGCTCAAATGGAG+AGG + chr1_1:62607707-62607726 Msa0034540:CDS 40.0%
ACATGCTGATGGAACTATCA+AGG + chr1_1:62607770-62607789 Msa0034540:CDS 40.0%
!! CCACACTGTTTCTGATTGTT+AGG - chr1_1:62607804-62607823 None:intergenic 40.0%
CCTAACAATCAGAAACAGTG+TGG + chr1_1:62607801-62607820 Msa0034540:intron 40.0%
CTTCCTTGGACAAAACAATC+CGG + chr1_1:62607975-62607994 Msa0034540:CDS 40.0%
TTCCTTGGACAAAACAATCC+GGG + chr1_1:62607976-62607995 Msa0034540:CDS 40.0%
GTCTGGACAATTAAACCTGA+CGG + chr1_1:62608330-62608349 Msa0034540:CDS 40.0%
TCTGGACAATTAAACCTGAC+GGG + chr1_1:62608331-62608350 Msa0034540:CDS 40.0%
ATGGCATGCTATGTAACTCA+AGG + chr1_1:62608417-62608436 Msa0034540:intron 40.0%
TGCTATGTAACTCAAGGAAC+GGG + chr1_1:62608423-62608442 Msa0034540:intron 40.0%
!! GTAAAATGCCTTGCTGTTTC+TGG + chr1_1:62608584-62608603 Msa0034540:CDS 40.0%
!! AAAATGCCTTGCTGTTTCTG+GGG + chr1_1:62608586-62608605 Msa0034540:CDS 40.0%
CACTGGTACCAGAAAATTGT+TGG + chr1_1:62608879-62608898 Msa0034540:CDS 40.0%
!! GATGATTTGCTCTTTGCTTG+TGG + chr1_1:62608934-62608953 Msa0034540:CDS 40.0%
ACAGACATATACCTTTCCTG+CGG - chr1_1:62608977-62608996 None:intergenic 40.0%
TTCACTTTCCTCCAAAATGG+TGG + chr1_1:62609064-62609083 Msa0034540:CDS 40.0%
!! CATTTTGATGGAAGCAACTC+GGG - chr1_1:62609201-62609220 None:intergenic 40.0%
!! CCATTTTGATGGAAGCAACT+CGG - chr1_1:62609202-62609221 None:intergenic 40.0%
!!! CTTTTTGTTGGTTCCTCTGA+TGG + chr1_1:62609275-62609294 Msa0034540:CDS 40.0%
ATTATGATCAGTGCCTAACC+TGG - chr1_1:62609307-62609326 None:intergenic 40.0%
TCAGTTAATGGGAAAGAAGC+TGG - chr1_1:62609354-62609373 None:intergenic 40.0%
GAGAGATTAGCAGCTGAAGA+TGG + chr1_1:62602753-62602772 Msa0034540:CDS 45.0%
AGGAACAACCTTCTTGCTTG+AGG - chr1_1:62603390-62603409 None:intergenic 45.0%
CCAGAACTCTTGGGCAAAAT+AGG - chr1_1:62603491-62603510 None:intergenic 45.0%
! CCTATTTTGCCCAAGAGTTC+TGG + chr1_1:62603488-62603507 Msa0034540:CDS 45.0%
!! TTGAGTGCATAGCTCTAACC+TGG - chr1_1:62603561-62603580 None:intergenic 45.0%
TTGTTCCCCCTTTGAATGGT+TGG - chr1_1:62603846-62603865 None:intergenic 45.0%
AGGGGGAACAATCATCACTA+TGG + chr1_1:62603855-62603874 Msa0034540:CDS 45.0%
GCTCTTCTTGGAGATTCCAT+AGG - chr1_1:62604179-62604198 None:intergenic 45.0%
CACTGCCGATGAAGAAGTTA+TGG + chr1_1:62604343-62604362 Msa0034540:CDS 45.0%
! ATAGTCTGGTGCTGAATGAC+AGG + chr1_1:62604645-62604664 Msa0034540:CDS 45.0%
CATAGGTTTGGCCTGTTTCA+AGG - chr1_1:62604950-62604969 None:intergenic 45.0%
! ATTCAAGAGTGGCTTGGAAC+AGG + chr1_1:62604981-62605000 Msa0034540:CDS 45.0%
GCTTGCGATAACACACTAGT+TGG - chr1_1:62605296-62605315 None:intergenic 45.0%
GGACTGTGAACAAGCTGTAT+TGG + chr1_1:62605385-62605404 Msa0034540:CDS 45.0%
TCAAAGCCAACAGTCGTAAG+TGG + chr1_1:62605464-62605483 Msa0034540:CDS 45.0%
! ACTTAAGAATGGTTTGGCCG+AGG + chr1_1:62605631-62605650 Msa0034540:CDS 45.0%
!! GAGCAAAAACTGGCCTTAGT+TGG - chr1_1:62605673-62605692 None:intergenic 45.0%
CTGGATCACTTGGATAAGAG+AGG - chr1_1:62605720-62605739 None:intergenic 45.0%
TGTGGAGTTTCTCTCAGAAC+TGG + chr1_1:62606057-62606076 Msa0034540:CDS 45.0%
!! ACATGTGGGGAGTGCTTAAT+AGG - chr1_1:62606386-62606405 None:intergenic 45.0%
! ATTGGACATGTCACTTCCTC+AGG + chr1_1:62606837-62606856 Msa0034540:CDS 45.0%
! TTGGACATGTCACTTCCTCA+GGG + chr1_1:62606838-62606857 Msa0034540:CDS 45.0%
GGGAAGTCATATACTGAAGC+TGG + chr1_1:62606858-62606877 Msa0034540:CDS 45.0%
TCAACCATGTGGCAAGAACA+AGG - chr1_1:62607200-62607219 None:intergenic 45.0%
CTCTACCTGATACTGGTGTA+AGG + chr1_1:62607235-62607254 Msa0034540:CDS 45.0%
ACATCCCTTACACCAGTATC+AGG - chr1_1:62607243-62607262 None:intergenic 45.0%
ATTCATGAGTGCCTCAAGCA+GGG - chr1_1:62607277-62607296 None:intergenic 45.0%
! GATCTTTTCCTCCAGGTTCT+TGG - chr1_1:62607313-62607332 None:intergenic 45.0%
! ATGCTAGGATCTTTTCCTCC+AGG - chr1_1:62607320-62607339 None:intergenic 45.0%
ACTTCAAAGCTAGGGATGCT+AGG - chr1_1:62607335-62607354 None:intergenic 45.0%
ACGCAAGGAAGAGAATACCA+CGG + chr1_1:62607879-62607898 Msa0034540:CDS 45.0%
!! TACCCGGATTGTTTTGTCCA+AGG - chr1_1:62607981-62608000 None:intergenic 45.0%
ACATAGCATGACGAGTTACC+CGG - chr1_1:62607997-62608016 None:intergenic 45.0%
GTGGGTCAACAAAAAGATGC+AGG - chr1_1:62608256-62608275 None:intergenic 45.0%
GCTAGCAGCCAATGCTAAAA+TGG + chr1_1:62608398-62608417 Msa0034540:CDS 45.0%
AACTCAAGGAACGGGAGTTA+AGG + chr1_1:62608431-62608450 Msa0034540:intron 45.0%
AAACTGTACTGTGGTTGCTC+TGG + chr1_1:62608611-62608630 Msa0034540:CDS 45.0%
! AAGACTTACCGGCTGAATGA+TGG + chr1_1:62608815-62608834 Msa0034540:intron 45.0%
TCTTCTATTGATGCAACCGC+AGG + chr1_1:62608958-62608977 Msa0034540:CDS 45.0%
TATTGATGCAACCGCAGGAA+AGG + chr1_1:62608963-62608982 Msa0034540:CDS 45.0%
ACTTTCCTCCAAAATGGTGG+TGG + chr1_1:62609067-62609086 Msa0034540:CDS 45.0%
CTTTCCTCCAAAATGGTGGT+GGG + chr1_1:62609068-62609087 Msa0034540:CDS 45.0%
CCGAGTTGCTTCCATCAAAA+TGG + chr1_1:62609199-62609218 Msa0034540:CDS 45.0%
GTTGCTTCCATCAAAATGGC+TGG + chr1_1:62609203-62609222 Msa0034540:CDS 45.0%
!! GTTACCACCAGCCATTTTGA+TGG - chr1_1:62609213-62609232 None:intergenic 45.0%
TCATTAGCGTCAGATGCTGA+TGG + chr1_1:62609245-62609264 Msa0034540:CDS 45.0%
TTCCTCTGATGGAAAGATCC+AGG + chr1_1:62609286-62609305 Msa0034540:CDS 45.0%
AACCTGGATCTTTCCATCAG+AGG - chr1_1:62609291-62609310 None:intergenic 45.0%
CTGATGGAAAGATCCAGGTT+AGG + chr1_1:62609291-62609310 Msa0034540:intron 45.0%
TTCTCTTGGCTTCTTGATGC+AGG + chr1_1:62609377-62609396 Msa0034540:intron 45.0%
!! AGAAATAAAATAAAATAAAA+TGG - chr1_1:62603645-62603664 None:intergenic 5.0%
TCATGCAAAGGAGTCATCGG+CGG - chr1_1:62603431-62603450 None:intergenic 50.0%
! CTCCTTTGCATGAGTTGAGC+CGG + chr1_1:62603438-62603457 Msa0034540:CDS 50.0%
ATATGATCGGAGCTCGTGTC+TGG - chr1_1:62604320-62604339 None:intergenic 50.0%
GATCCTGTCACCCTTGAAAC+AGG + chr1_1:62604936-62604955 Msa0034540:CDS 50.0%
GGAGAACATGAAGAACCCCT+TGG - chr1_1:62605146-62605165 None:intergenic 50.0%
TTGCTATGGCGGCAGCTTTA+GGG - chr1_1:62605784-62605803 None:intergenic 50.0%
ATTGCTATGGCGGCAGCTTT+AGG - chr1_1:62605785-62605804 None:intergenic 50.0%
TAGCGTGAGAGGAATCTGTG+TGG + chr1_1:62606039-62606058 Msa0034540:CDS 50.0%
!! AATTGGTGTTGGACGAGGAG+CGG - chr1_1:62606431-62606450 None:intergenic 50.0%
GCTGGATTGCTGAAGATTGC+AGG + chr1_1:62606876-62606895 Msa0034540:CDS 50.0%
! GTCAGAGTGTCCCAATTGCT+CGG - chr1_1:62606934-62606953 None:intergenic 50.0%
! CTTGCCTTGTTCTTGCCACA+TGG + chr1_1:62607193-62607212 Msa0034540:CDS 50.0%
GAGCATGTGTGTCAACCATG+TGG - chr1_1:62607211-62607230 None:intergenic 50.0%
CTGGTGTAAGGGATGTTGCT+CGG + chr1_1:62607247-62607266 Msa0034540:CDS 50.0%
CATTCATGAGTGCCTCAAGC+AGG - chr1_1:62607278-62607297 None:intergenic 50.0%
CTGAATGGTCAGGTCTTGAG+TGG + chr1_1:62607747-62607766 Msa0034540:CDS 50.0%
GTCTTGAGTGGACATGCTGA+TGG + chr1_1:62607759-62607778 Msa0034540:CDS 50.0%
CGCAAGGAAGAGAATACCAC+GGG + chr1_1:62607880-62607899 Msa0034540:CDS 50.0%
CGAGTTTCTTGAATCACCCG+TGG - chr1_1:62607899-62607918 None:intergenic 50.0%
GTTTGTCCCCAGAAACAGCA+AGG - chr1_1:62608595-62608614 None:intergenic 50.0%
TCTGGGGACAAACTGTACTG+TGG + chr1_1:62608602-62608621 Msa0034540:CDS 50.0%
! TAGCGATCCCACCACCATTT+TGG - chr1_1:62609078-62609097 None:intergenic 50.0%
!! CACTGTTGATGGCTACACGA+TGG - chr1_1:62609118-62609137 None:intergenic 50.0%
GCTTCCATCAAAATGGCTGG+TGG + chr1_1:62609206-62609225 Msa0034540:CDS 50.0%
TTGGCTTCTTGATGCAGGTC+TGG + chr1_1:62609382-62609401 Msa0034540:intron 50.0%
TGGCTTCTTGATGCAGGTCT+GGG + chr1_1:62609383-62609402 Msa0034540:intron 50.0%
GGCTCCGCAATTGGCAACAT+AGG - chr1_1:62603410-62603429 None:intergenic 55.0%
! GACCGGCTCAACTCATGCAA+AGG - chr1_1:62603443-62603462 None:intergenic 55.0%
TGGCCTGTTTCAAGGGTGAC+AGG - chr1_1:62604942-62604961 None:intergenic 55.0%
ATAGAGCCTGTCGCGTGATG+GGG - chr1_1:62605019-62605038 None:intergenic 55.0%
GATAGAGCCTGTCGCGTGAT+GGG - chr1_1:62605020-62605039 None:intergenic 55.0%
GCTGGAAACGATAGCGTGAG+AGG + chr1_1:62606028-62606047 Msa0034540:CDS 55.0%
TGCTCGGAAATCCCTGCTTG+AGG + chr1_1:62607263-62607282 Msa0034540:CDS 55.0%
CCAGGTTCTTGGATGACTGG+AGG - chr1_1:62607302-62607321 None:intergenic 55.0%
CCTCCAGTCATCCAAGAACC+TGG + chr1_1:62607299-62607318 Msa0034540:CDS 55.0%
CCTCCAGGTTCTTGGATGAC+TGG - chr1_1:62607305-62607324 None:intergenic 55.0%
CCAGTCATCCAAGAACCTGG+AGG + chr1_1:62607302-62607321 Msa0034540:CDS 55.0%
CTTCCTTGCGTCCCATACCT+AGG - chr1_1:62607870-62607889 None:intergenic 55.0%
! CTTACCGGCTGAATGATGGC+AGG + chr1_1:62608819-62608838 Msa0034540:intron 55.0%
ACCTCCTGCCATCATTCAGC+CGG - chr1_1:62608826-62608845 None:intergenic 55.0%
! CGATCCCACCACCATTTTGG+AGG - chr1_1:62609075-62609094 None:intergenic 55.0%
! GTGGTGGGATCGCTATCAAC+AGG + chr1_1:62609083-62609102 Msa0034540:CDS 55.0%
CTTGATGCAGGTCTGGGCAT+TGG + chr1_1:62609389-62609408 Msa0034540:intron 55.0%
AACATGCCCCATCACGCGAC+AGG + chr1_1:62605010-62605029 Msa0034540:CDS 60.0%
GGATAGAGCCTGTCGCGTGA+TGG - chr1_1:62605021-62605040 None:intergenic 60.0%
CCTTGCGTCCCATACCTAGG+AGG - chr1_1:62607867-62607886 None:intergenic 60.0%
CCTCCTAGGTATGGGACGCA+AGG + chr1_1:62607864-62607883 Msa0034540:intron 60.0%
ACCGGCTGAATGATGGCAGG+AGG + chr1_1:62608822-62608841 Msa0034540:intron 60.0%
GTCATCGGCGGCTCCGCAAT+TGG - chr1_1:62603419-62603438 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 62602621 62609416 62602621 ID=Msa0034540;Name=Msa0034540
chr1_1 mRNA 62602621 62609416 62602621 ID=Msa0034540-mRNA-1;Parent=Msa0034540;Name=Msa0034540-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.26|0.12|1|1|1|16|0|1494
chr1_1 exon 62602621 62603600 62602621 ID=Msa0034540-mRNA-1:exon:19786;Parent=Msa0034540-mRNA-1
chr1_1 exon 62603823 62603886 62603823 ID=Msa0034540-mRNA-1:exon:19787;Parent=Msa0034540-mRNA-1
chr1_1 exon 62603996 62604364 62603996 ID=Msa0034540-mRNA-1:exon:19788;Parent=Msa0034540-mRNA-1
chr1_1 exon 62604581 62604666 62604581 ID=Msa0034540-mRNA-1:exon:19789;Parent=Msa0034540-mRNA-1
chr1_1 exon 62604812 62606092 62604812 ID=Msa0034540-mRNA-1:exon:19790;Parent=Msa0034540-mRNA-1
chr1_1 exon 62606480 62606624 62606480 ID=Msa0034540-mRNA-1:exon:19791;Parent=Msa0034540-mRNA-1
chr1_1 exon 62606717 62606974 62606717 ID=Msa0034540-mRNA-1:exon:19792;Parent=Msa0034540-mRNA-1
chr1_1 exon 62607063 62607372 62607063 ID=Msa0034540-mRNA-1:exon:19793;Parent=Msa0034540-mRNA-1
chr1_1 exon 62607458 62607582 62607458 ID=Msa0034540-mRNA-1:exon:19794;Parent=Msa0034540-mRNA-1
chr1_1 exon 62607672 62607791 62607672 ID=Msa0034540-mRNA-1:exon:19795;Parent=Msa0034540-mRNA-1
chr1_1 exon 62607872 62607997 62607872 ID=Msa0034540-mRNA-1:exon:19796;Parent=Msa0034540-mRNA-1
chr1_1 exon 62608330 62608428 62608330 ID=Msa0034540-mRNA-1:exon:19797;Parent=Msa0034540-mRNA-1
chr1_1 exon 62608536 62608646 62608536 ID=Msa0034540-mRNA-1:exon:19798;Parent=Msa0034540-mRNA-1
chr1_1 exon 62608841 62608984 62608841 ID=Msa0034540-mRNA-1:exon:19799;Parent=Msa0034540-mRNA-1
chr1_1 exon 62609059 62609307 62609059 ID=Msa0034540-mRNA-1:exon:19800;Parent=Msa0034540-mRNA-1
chr1_1 exon 62609399 62609416 62609399 ID=Msa0034540-mRNA-1:exon:19801;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62602621 62603600 62602621 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62603823 62603886 62603823 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62603996 62604364 62603996 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62604581 62604666 62604581 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62604812 62606092 62604812 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62606480 62606624 62606480 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62606717 62606974 62606717 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62607063 62607372 62607063 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62607458 62607582 62607458 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62607672 62607791 62607672 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62607872 62607997 62607872 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62608330 62608428 62608330 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62608536 62608646 62608536 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62608841 62608984 62608841 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62609059 62609307 62609059 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
chr1_1 CDS 62609399 62609416 62609399 ID=Msa0034540-mRNA-1:cds;Parent=Msa0034540-mRNA-1
Gene Sequence

>Msa0034540

ATGTCAGGGAATTTCAGATTCATGATGGATCAGAAGGATATTGTTAGATTCTTGACTACAACTATAGATAGTTTCATTCAAGATAGGTTAATCAACAAAGAACAAAGAACACAACATAAAGATCAATGTGCTGAGAGATTAGCAGCTGAAGATGGAAACACCGACAAAGAAACTGAGGTAGAATATTCTGATCAAGCAGTATTAGCAAATTTGGATTGGGGCATTGAGGCTCTTGAAGAAGCTATTAATACCTATAATATGGAAACTAAGCTTGCAAGATTAGATTATGCTGAGAAAATGTTGCAAGTGTGTGCAATGTTGAATCCTAAGCAAAAAACTGCTGGAGTACCAAATTCATATTTATCAGCTTGGGCACATTTGAATCTATCCTATTTATGGAAATTGAGGAACAACATTAAGAGTTGTATTTATCATTCTCTGGAGATGTTCATTGTTGATCCTTTTTTCTCTAGGATTGATTTTGCTCCTGAATTATGGAAAAACCTGTTTCTTCCACATATGAGTTCAATTGTAGGGTGGTATTCAGAGGAGAGACATAAGCTTATGATGGAAGTGTTACCTGAATCTTCTGATTTTTCTTATACTGCTGATTTCGATAAAGTTTTCAATGAGTCTTTGGTATTTTCTATGAGGCCAAATCAGCTTGAGAAATTGCAAAAACTTGAGCAGCTTTATGGAGAGTCATTAGATGAGAACACAAGGCTATATGCAAAATATTATAATGATTGTATGAACCCTGATTCTACCTCAAGCAAGAAGGTTGTTCCTATGTTGCCAATTGCGGAGCCGCCGATGACTCCTTTGCATGAGTTGAGCCGGTCTGTTCCTGATTTTGTAAAGTTTGGTCCTATTTTGCCCAAGAGTTCTGGATTTTCTATGACAACAAGAAGACCTAATGATGGTTTAAATGAAACAACCAGGTTAGAGCTATGCACTCAAACTTTGAATTCTTGGAATCTAGAGACTATAGCTTCAAATTCCAACCATTCAAAGGGGGAACAATCATCACTATGGTGTGCTAAGGAGAGCATAATTGAAGAGATTGAAGACGGTTCGGATTCTGAGCATTATGATGCATCTGTGGATTCTGATAAAATCAATATTTTCTCACCTGAATCGAAGAAAAATATCAAGGATGAAGATGTTGAACCAAAAGTATATCGATCAAACCAAAAGAATCAAATGAATTCTCCCAATATATCTCCTATGGAATCTCCAAGAAGAGCTTCAAATAACTCATCTACAAATCCTCATATCCGTAGGAAAAAAGAATCAAAGTTTTTGCGGTTACTATCTAATCGTTTTACGGGATCAATTGTTTCTGATCACTCTCTATCATCATCTCCAGACACGAGCTCCGATCATATTTTCACTGCCGATGAAGAAGTTATGGTCTTGAATAATATTAAGAGGAAGAATGATAGTCAAACACCAAGTATGAATCAAGACAATGAGAATAGTCTGGTGCTGAATGACAGTTCACATTGTGAAAGTGAAGATGGTTATCAAAGCTCTAGTTCATTTCCAAAATTAGAGAAACTGACTATTGGATCAAAACCACCAAAAGATTTTGTTTGTCCAATCACAGGTCAGATATTTAGTGATCCTGTCACCCTTGAAACAGGCCAAACCTATGAAAGAAAAGCTATTCAAGAGTGGCTTGGAACAGGAAACACAACATGCCCCATCACGCGACAGGCTCTATCCGCAAACATCTTACCAAAAACAAACTATGTTTTGAAGAGATTGATAGTATCATGGAAAGAACAGAATCCTGAACTAGCTCAAGAATTCTCAAATTCTAATACACCAAGGGGTTCTTCATGTTCTCCCTCTGCAAAAGACATCACAATGGTTTCGAGTATACAAAGAACAACTGATTCACCAAGTCAGAAGTACAAAGACGACTATATTAAACAAAGAAACAACAGATTTACGAGGGTTTCTGTCGGTGCATCTCCAACTAGTGTGTTATCGCAAGCTGCAGTTGAAATGATTATAAATTCCTTGACACCTTACATCACAAGTCTATGTACATCAGAAAACTTGCAGGACTGTGAACAAGCTGTATTGGAAATAGCAAGATTGTGGAAGGATTCAAAGACTGATCCTCAGATTCATTCTTATTTATCAAAGCCAACAGTCGTAAGTGGTTTAGTAGAAATTCTCTCTGCTTCTCTAAATAGAGAAGTTCTGAGAAGATCAATTTATATTCTTTCAGAGCTAATCTTTTCAGATGAAAGAGTTGGAGAAACACTTAACAGTGTAGACTCTGATTTTGATTGCTTGGCTATGCTACTTAAGAATGGTTTGGCCGAGGCTGCACTACTTATTTACCAACTAAGGCCAGTTTTTGCTCAGCTTTCAGAACATGAACTTATACCCTCTCTTATCCAAGTGATCCAGAACAAAAGTGAGGATATAGATGATTTTCAGTTAGCTATAGACCCTAAAGCTGCCGCCATAGCAATTCTTGAGCAAATTTTAATAGGAGGGGATGAATATAATAGGTCAGTCAATGCTTCAAGTGTTATCTCAGCAAACGGAATTCCAGCCATAGTCAAGTATTTGGACAAAACCGAAGGAAGGAGACCTGTAATTTCCATACTTTTGTGTTGCATGCAAGCTGAAAAAAGTTGCAAGAGCTCAATAGCAAATAGAATTGAATTGTCACCCATTCTTGAATTATTTCACGCTGGAAACGATAGCGTGAGAGGAATCTGTGTGGAGTTTCTCTCAGAACTGGTTCGATTGAATAGAAGGACGTCCAGCAACCATATATTACAGATAATCAAGGATGAAGGAGCTTTCAGTACAATGCATACATTTCTTGTATATCTTCAGATGGCTCCAATGGAACATCAAATTGCTGTTGCCAGTCTTCTTCTTCAACTTGATCTTTTGACTGAGCCACGAAAGATGAGCATTTACAGGGAAGAAGCTGTAGAGACACTGATAGAAGCACTTTGGCAAAAGGACTTCTCAAATAATCAAATGAAGGCTTTAGATGCTTTACTATTTCTTATTGGACATGTCACTTCCTCAGGGAAGTCATATACTGAAGCTGGATTGCTGAAGATTGCAGGATTTGATCAACCTTACAATGTTTTAATGAAGGCCGAGCAATTGGGACACTCTGACAATGATTTCATGGAAACAATGGAGGATGAAAAAAACGCCATGAAATCTTGGCAGAAAAGGGTAGCTTCTGTACTTTGCAATCATGAAAACGGTTCAATATTTCAAGCTTTGGAAGAATGCCTAAAGAGTAACTCCTTAAAGATGGCAAAATCTTGCCTTGTTCTTGCCACATGGTTGACACACATGCTCTTTACTCTACCTGATACTGGTGTAAGGGATGTTGCTCGGAAATCCCTGCTTGAGGCACTCATGAATGTCCTCCAGTCATCCAAGAACCTGGAGGAAAAGATCCTAGCATCCCTAGCTTTGAAGTCTTTCATTAGTGATCCAACTGTTCACGAAGTACTAAGAGTTTATGCTAAAAGCATCTATAGAATCTTGAGGAAGCTGAAGAAATATTCAACAGTTGCAGCTGATATTTTGAAAGCCTTACTAAACTTAAATTCTGTTGATGTGACAGAGTTGTGGAGCTGTAAAGAAGTAGTTGAGTTAGATTTGAGCTCAAATGGAGAGGTGCTTTCTTTGCATTATCTGAATGGTCAGGTCTTGAGTGGACATGCTGATGGAACTATCAAGGTATGGGACGCAAGGAAGAGAATACCACGGGTGATTCAAGAAACTCGCGAGCACAAGAAAGCTGTTACATCTCTTTGCTCTTCAGTTGATAAACTCTACAGTTCTTCCTTGGACAAAACAATCCGGGTCTGGACAATTAAACCTGACGGGATTAAATGTATAGATGTTTATGACGTTAAGGAGGCAGTGTATGAGCTAGCAGCCAATGCTAAAATGGCATGCTATGTTTTTAATTGGATAGATGCTCCCAAGTTCATCAATTTCAACAAATATGTAAAATGCCTTGCTGTTTCTGGGGACAAACTGTACTGTGGTTGCTCTGGTTACAGCATACAAGAGGTTGACTTGTCCAAACATACATCTACTTCATTCTTCACTGGTACCAGAAAATTGTTGGGAAAGCAAACCATACACTCCCTTCAAATTCATGATGATTTGCTCTTTGCTTGTGGTTCTTCTATTGATGCAACCGCAGGAAAGATATTTTCACTTTCCTCCAAAATGGTGGTGGGATCGCTATCAACAGGACTCGACGTCCATCGTGTAGCCATCAACAGTGACTTCATATTTGCTGGTACGAAATTTGGCACCATTGAAGTTTGGCTAAAAGATAAGTTCACCCGAGTTGCTTCCATCAAAATGGCTGGTGGTAACACAAAAATTACATCATTAGCGTCAGATGCTGATGGAATGATGCTTTTTGTTGGTTCCTCTGATGGAAAGATCCAGGTCTGGGCATTGGACTAA
Protein sequence

>Msa0034540

MSGNFRFMMDQKDIVRFLTTTIDSFIQDRLINKEQRTQHKDQCAERLAAEDGNTDKETEVEYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKTAGVPNSYLSAWAHLNLSYLWKLRNNIKSCIYHSLEMFIVDPFFSRIDFAPELWKNLFLPHMSSIVGWYSEERHKLMMEVLPESSDFSYTADFDKVFNESLVFSMRPNQLEKLQKLEQLYGESLDENTRLYAKYYNDCMNPDSTSSKKVVPMLPIAEPPMTPLHELSRSVPDFVKFGPILPKSSGFSMTTRRPNDGLNETTRLELCTQTLNSWNLETIASNSNHSKGEQSSLWCAKESIIEEIEDGSDSEHYDASVDSDKINIFSPESKKNIKDEDVEPKVYRSNQKNQMNSPNISPMESPRRASNNSSTNPHIRRKKESKFLRLLSNRFTGSIVSDHSLSSSPDTSSDHIFTADEEVMVLNNIKRKNDSQTPSMNQDNENSLVLNDSSHCESEDGYQSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYVLKRLIVSWKEQNPELAQEFSNSNTPRGSSCSPSAKDITMVSSIQRTTDSPSQKYKDDYIKQRNNRFTRVSVGASPTSVLSQAAVEMIINSLTPYITSLCTSENLQDCEQAVLEIARLWKDSKTDPQIHSYLSKPTVVSGLVEILSASLNREVLRRSIYILSELIFSDERVGETLNSVDSDFDCLAMLLKNGLAEAALLIYQLRPVFAQLSEHELIPSLIQVIQNKSEDIDDFQLAIDPKAAAIAILEQILIGGDEYNRSVNASSVISANGIPAIVKYLDKTEGRRPVISILLCCMQAEKSCKSSIANRIELSPILELFHAGNDSVRGICVEFLSELVRLNRRTSSNHILQIIKDEGAFSTMHTFLVYLQMAPMEHQIAVASLLLQLDLLTEPRKMSIYREEAVETLIEALWQKDFSNNQMKALDALLFLIGHVTSSGKSYTEAGLLKIAGFDQPYNVLMKAEQLGHSDNDFMETMEDEKNAMKSWQKRVASVLCNHENGSIFQALEECLKSNSLKMAKSCLVLATWLTHMLFTLPDTGVRDVARKSLLEALMNVLQSSKNLEEKILASLALKSFISDPTVHEVLRVYAKSIYRILRKLKKYSTVAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKVWDARKRIPRVIQETREHKKAVTSLCSSVDKLYSSSLDKTIRVWTIKPDGIKCIDVYDVKEAVYELAANAKMACYVFNWIDAPKFINFNKYVKCLAVSGDKLYCGCSGYSIQEVDLSKHTSTSFFTGTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSKMVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLASDADGMMLFVGSSDGKIQVWALD*