Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236620 | XP_003593909.1 | 84.416 | 77 | 3 | 2 | 1 | 75 | 1 | 70 | 4.09e-34 | 121 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236620 | G7IP75 | 84.416 | 77 | 3 | 2 | 1 | 75 | 1 | 70 | 1.95e-34 | 121 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0236620 | 0.801276 | 9.716466e-49 | -8.615850e-47 |
| Msa0007850 | Msa0236620 | 0.809629 | 1.721726e-50 | -8.615850e-47 |
| Msa0010490 | Msa0236620 | 0.816532 | 5.267281e-52 | -8.615850e-47 |
| Msa0010500 | Msa0236620 | 0.813113 | 3.016393e-51 | -8.615850e-47 |
| Msa0029630 | Msa0236620 | 0.846908 | 1.615924e-59 | -8.615850e-47 |
| Msa0033880 | Msa0236620 | 0.814128 | 1.803601e-51 | -8.615850e-47 |
| Msa0048180 | Msa0236620 | 0.803886 | 2.813732e-49 | -8.615850e-47 |
| Msa0068020 | Msa0236620 | 0.808796 | 2.596700e-50 | -8.615850e-47 |
| Msa0077900 | Msa0236620 | 0.807498 | 4.909429e-50 | -8.615850e-47 |
| Msa0079920 | Msa0236620 | 0.827138 | 1.845770e-54 | -8.615850e-47 |
| Msa0080730 | Msa0236620 | 0.853374 | 2.493472e-61 | -8.615850e-47 |
| Msa0093010 | Msa0236620 | 0.851430 | 8.921049e-61 | -8.615850e-47 |
| Msa0095360 | Msa0236620 | 0.802521 | 5.393484e-49 | -8.615850e-47 |
| Msa0095770 | Msa0236620 | 0.803757 | 2.993845e-49 | -8.615850e-47 |
| Msa0115370 | Msa0236620 | 0.808303 | 3.310101e-50 | -8.615850e-47 |
| Msa0116130 | Msa0236620 | 0.806689 | 7.281367e-50 | -8.615850e-47 |
| Msa0119900 | Msa0236620 | 0.800425 | 1.450025e-48 | -8.615850e-47 |
| Msa0125450 | Msa0236620 | 0.841648 | 4.183319e-58 | -8.615850e-47 |
| Msa0125540 | Msa0236620 | 0.818484 | 1.913745e-52 | -8.615850e-47 |
| Msa0126840 | Msa0236620 | 0.806588 | 7.646934e-50 | -8.615850e-47 |
| Msa0126880 | Msa0236620 | 0.822016 | 2.968093e-53 | -8.615850e-47 |
| Msa0127850 | Msa0236620 | 0.816878 | 4.406785e-52 | -8.615850e-47 |
| Msa0136120 | Msa0236620 | 0.810693 | 1.015184e-50 | -8.615850e-47 |
| Msa0142410 | Msa0236620 | 0.828178 | 1.038767e-54 | -8.615850e-47 |
| Msa0149440 | Msa0236620 | 0.805797 | 1.122168e-49 | -8.615850e-47 |
| Msa0168090 | Msa0236620 | 0.805373 | 1.377615e-49 | -8.615850e-47 |
| Msa0169610 | Msa0236620 | 0.827248 | 1.737199e-54 | -8.615850e-47 |
| Msa0174000 | Msa0236620 | 0.816416 | 5.594102e-52 | -8.615850e-47 |
| Msa0177960 | Msa0236620 | 0.826696 | 2.353777e-54 | -8.615850e-47 |
| Msa0190590 | Msa0236620 | 0.812075 | 5.087821e-51 | -8.615850e-47 |
| Msa0202490 | Msa0236620 | 0.830914 | 2.245785e-55 | -8.615850e-47 |
| Msa0218830 | Msa0236620 | 0.818845 | 1.584348e-52 | -8.615850e-47 |
| Msa0223170 | Msa0236620 | 0.823869 | 1.098131e-53 | -8.615850e-47 |
| Msa0231790 | Msa0236620 | 0.812357 | 4.416266e-51 | -8.615850e-47 |
| Msa0236620 | Msa0241830 | 0.815165 | 1.063180e-51 | -8.615850e-47 |
| Msa0236620 | Msa0244980 | 0.830439 | 2.935436e-55 | -8.615850e-47 |
| Msa0236620 | Msa0245580 | 0.897087 | 1.975164e-76 | -8.615850e-47 |
| Msa0236620 | Msa0249580 | 0.831356 | 1.748616e-55 | -8.615850e-47 |
| Msa0236620 | Msa0257490 | 0.826107 | 3.252380e-54 | -8.615850e-47 |
| Msa0236620 | Msa0262480 | 0.822316 | 2.529017e-53 | -8.615850e-47 |
| Msa0236620 | Msa0269470 | 0.847307 | 1.255987e-59 | -8.615850e-47 |
| Msa0236620 | Msa0275360 | 0.802831 | 4.655091e-49 | -8.615850e-47 |
| Msa0236620 | Msa0281530 | 0.820712 | 5.933552e-53 | -8.615850e-47 |
| Msa0236620 | Msa0284180 | 0.838348 | 3.033896e-57 | -8.615850e-47 |
| Msa0236620 | Msa0295250 | 0.833188 | 6.153935e-56 | -8.615850e-47 |
| Msa0236620 | Msa0296250 | 0.832489 | 9.179645e-56 | -8.615850e-47 |
| Msa0236620 | Msa0296790 | 0.820954 | 5.220261e-53 | -8.615850e-47 |
| Msa0236620 | Msa0296920 | 0.807847 | 4.139247e-50 | -8.615850e-47 |
| Msa0236620 | Msa0300350 | 0.820445 | 6.833357e-53 | -8.615850e-47 |
| Msa0236620 | Msa0304660 | 0.802720 | 4.907028e-49 | -8.615850e-47 |
| Msa0236620 | Msa0305310 | 0.803034 | 4.225888e-49 | -8.615850e-47 |
| Msa0236620 | Msa0320590 | 0.831613 | 1.511787e-55 | -8.615850e-47 |
| Msa0236620 | Msa0322900 | 0.803755 | 2.995649e-49 | -8.615850e-47 |
| Msa0236620 | Msa0331700 | 0.804254 | 2.359287e-49 | -8.615850e-47 |
| Msa0236620 | Msa0348830 | 0.839257 | 1.765309e-57 | -8.615850e-47 |
| Msa0236620 | Msa0363640 | 0.804471 | 2.126384e-49 | -8.615850e-47 |
| Msa0236620 | Msa0376820 | 0.803555 | 3.296463e-49 | -8.615850e-47 |
| Msa0236620 | Msa0377820 | 0.805704 | 1.173911e-49 | -8.615850e-47 |
| Msa0236620 | Msa0384670 | 0.824430 | 8.104501e-54 | -8.615850e-47 |
| Msa0236620 | Msa0385500 | 0.836941 | 6.966051e-57 | -8.615850e-47 |
| Msa0236620 | Msa0423750 | 0.860301 | 2.271742e-63 | -8.615850e-47 |
| Msa0236620 | Msa0426580 | 0.815841 | 7.517234e-52 | -8.615850e-47 |
| Msa0236620 | Msa0434570 | 0.812302 | 4.540123e-51 | -8.615850e-47 |
| Msa0236620 | Msa0434770 | 0.816264 | 6.047062e-52 | -8.615850e-47 |
| Msa0236620 | Msa0443390 | 0.860920 | 1.475295e-63 | -8.615850e-47 |
| Msa0236620 | Msa0460100 | 0.814140 | 1.793239e-51 | -8.615850e-47 |
| Msa0236620 | Msa0470530 | 0.816844 | 4.484915e-52 | -8.615850e-47 |
| Msa0236620 | Msa0471960 | 0.806494 | 8.006095e-50 | -8.615850e-47 |
| Msa0236620 | Msa0472130 | 0.802880 | 4.547660e-49 | -8.615850e-47 |
| Msa0236620 | Msa0478580 | 0.825489 | 4.559418e-54 | -8.615850e-47 |
| Msa0236620 | Msa0511770 | 0.831764 | 1.387638e-55 | -8.615850e-47 |
| Msa0236620 | Msa0524500 | 0.804302 | 2.305755e-49 | -8.615850e-47 |
| Msa0236620 | Msa0527020 | 0.805316 | 1.415810e-49 | -8.615850e-47 |
| Msa0236620 | Msa0534750 | 0.801464 | 8.893483e-49 | -8.615850e-47 |
| Msa0236620 | Msa0547160 | 0.822716 | 2.041039e-53 | -8.615850e-47 |
| Msa0236620 | Msa0547990 | 0.836152 | 1.106100e-56 | -8.615850e-47 |
| Msa0236620 | Msa0550540 | 0.802666 | 5.034951e-49 | -8.615850e-47 |
| Msa0236620 | Msa0550570 | 0.805331 | 1.405778e-49 | -8.615850e-47 |
| Msa0236620 | Msa0581110 | 0.866858 | 2.096896e-65 | -8.615850e-47 |
| Msa0236620 | Msa0603570 | 0.845216 | 4.662423e-59 | -8.615850e-47 |
| Msa0236620 | Msa0610310 | 0.822691 | 2.068777e-53 | -8.615850e-47 |
| Msa0236620 | Msa0615580 | 0.837049 | 6.536058e-57 | -8.615850e-47 |
| Msa0236620 | Msa0615680 | 0.811375 | 7.224615e-51 | -8.615850e-47 |
| Msa0236620 | Msa0631250 | 0.810710 | 1.006941e-50 | -8.615850e-47 |
| Msa0236620 | Msa0642970 | 0.847351 | 1.221471e-59 | -8.615850e-47 |
| Msa0236620 | Msa0644030 | 0.816841 | 4.490757e-52 | -8.615850e-47 |
| Msa0236620 | Msa0661300 | 0.815835 | 7.543031e-52 | -8.615850e-47 |
| Msa0236620 | Msa0662630 | 0.817642 | 2.965785e-52 | -8.615850e-47 |
| Msa0236620 | Msa0666230 | 0.829600 | 4.701685e-55 | -8.615850e-47 |
| Msa0236620 | Msa0689440 | 0.812682 | 3.749096e-51 | -8.615850e-47 |
| Msa0236620 | Msa0693210 | 0.816486 | 5.394359e-52 | -8.615850e-47 |
| Msa0236620 | Msa0694990 | 0.821671 | 3.567453e-53 | -8.615850e-47 |
| Msa0236620 | Msa0699190 | 0.824584 | 7.457926e-54 | -8.615850e-47 |
| Msa0236620 | Msa0722300 | -0.810174 | 1.313967e-50 | -8.615850e-47 |
| Msa0236620 | Msa0751010 | 0.809835 | 1.554357e-50 | -8.615850e-47 |
| Msa0236620 | Msa0785130 | 0.814137 | 1.795536e-51 | -8.615850e-47 |
| Msa0236620 | Msa0794050 | 0.834757 | 2.492387e-56 | -8.615850e-47 |
| Msa0236620 | Msa0800370 | 0.818847 | 1.583304e-52 | -8.615850e-47 |
| Msa0236620 | Msa0808800 | 0.841438 | 4.752859e-58 | -8.615850e-47 |
| Msa0236620 | Msa0818770 | 0.815486 | 9.019746e-52 | -8.615850e-47 |
| Msa0236620 | Msa0822170 | 0.804691 | 1.912746e-49 | -8.615850e-47 |
| Msa0236620 | Msa0822180 | 0.801947 | 7.080808e-49 | -8.615850e-47 |
| Msa0236620 | Msa0826500 | 0.800756 | 1.241104e-48 | -8.615850e-47 |
| Msa0236620 | Msa0838370 | 0.822297 | 2.554686e-53 | -8.615850e-47 |
| Msa0236620 | Msa0844280 | 0.810639 | 1.042928e-50 | -8.615850e-47 |
| Msa0236620 | Msa0858440 | 0.830120 | 3.511727e-55 | -8.615850e-47 |
| Msa0236620 | Msa0859320 | 0.801289 | 9.658952e-49 | -8.615850e-47 |
| Msa0236620 | Msa0881270 | 0.800887 | 1.167045e-48 | -8.615850e-47 |
| Msa0236620 | Msa0882730 | 0.818699 | 1.710130e-52 | -8.615850e-47 |
| Msa0236620 | Msa0913240 | 0.821913 | 3.136184e-53 | -8.615850e-47 |
| Msa0236620 | Msa0943170 | 0.829072 | 6.315235e-55 | -8.615850e-47 |
| Msa0236620 | Msa0944200 | 0.809673 | 1.684574e-50 | -8.615850e-47 |
| Msa0236620 | Msa0947800 | 0.818879 | 1.556409e-52 | -8.615850e-47 |
| Msa0236620 | Msa0958000 | 0.837281 | 5.702237e-57 | -8.615850e-47 |
| Msa0236620 | Msa0963020 | 0.800444 | 1.437061e-48 | -8.615850e-47 |
| Msa0236620 | Msa0971840 | 0.809698 | 1.664010e-50 | -8.615850e-47 |
| Msa0236620 | Msa1019240 | 0.809446 | 1.884458e-50 | -8.615850e-47 |
| Msa0236620 | Msa1019260 | 0.815679 | 8.171089e-52 | -8.615850e-47 |
| Msa0236620 | Msa1025940 | 0.822136 | 2.783408e-53 | -8.615850e-47 |
| Msa0236620 | Msa1039900 | 0.818727 | 1.685539e-52 | -8.615850e-47 |
| Msa0236620 | Msa1042480 | 0.812211 | 4.751835e-51 | -8.615850e-47 |
| Msa0236620 | Msa1059300 | 0.808389 | 3.171812e-50 | -8.615850e-47 |
| Msa0236620 | Msa1070390 | 0.814743 | 1.318899e-51 | -8.615850e-47 |
| Msa0236620 | Msa1104210 | 0.814529 | 1.471029e-51 | -8.615850e-47 |
| Msa0236620 | Msa1123350 | 0.830741 | 2.475566e-55 | -8.615850e-47 |
| Msa0236620 | Msa1124070 | 0.814603 | 1.416272e-51 | -8.615850e-47 |
| Msa0236620 | Msa1126830 | 0.870619 | 1.272811e-66 | -8.615850e-47 |
| Msa0236620 | Msa1127590 | 0.817408 | 3.348937e-52 | -8.615850e-47 |
| Msa0236620 | Msa1131560 | 0.829692 | 4.465644e-55 | -8.615850e-47 |
| Msa0236620 | Msa1165780 | 0.888438 | 5.901919e-73 | -8.615850e-47 |
| Msa0236620 | Msa1166870 | 0.826231 | 3.038016e-54 | -8.615850e-47 |
| Msa0236620 | Msa1179980 | 0.804851 | 1.770909e-49 | -8.615850e-47 |
| Msa0236620 | Msa1184370 | 0.800211 | 1.602934e-48 | -8.615850e-47 |
| Msa0236620 | Msa1194230 | 0.801386 | 9.227214e-49 | -8.615850e-47 |
| Msa0236620 | Msa1195300 | 0.818633 | 1.770835e-52 | -8.615850e-47 |
| Msa0236620 | Msa1202580 | 0.806100 | 9.692260e-50 | -8.615850e-47 |
| Msa0236620 | Msa1206650 | 0.839393 | 1.627479e-57 | -8.615850e-47 |
| Msa0236620 | Msa1208020 | 0.820496 | 6.652930e-53 | -8.615850e-47 |
| Msa0236620 | Msa1211830 | 0.806503 | 7.971880e-50 | -8.615850e-47 |
| Msa0236620 | Msa1226610 | 0.803053 | 4.188051e-49 | -8.615850e-47 |
| Msa0236620 | Msa1227690 | 0.816918 | 4.315926e-52 | -8.615850e-47 |
| Msa0236620 | Msa1233850 | 0.818742 | 1.672274e-52 | -8.615850e-47 |
| Msa0236620 | Msa1262890 | 0.817857 | 2.653355e-52 | -8.615850e-47 |
| Msa0236620 | Msa1270620 | 0.813039 | 3.132160e-51 | -8.615850e-47 |
| Msa0236620 | Msa1270690 | 0.810676 | 1.024136e-50 | -8.615850e-47 |
| Msa0236620 | Msa1276970 | 0.804937 | 1.699607e-49 | -8.615850e-47 |
| Msa0236620 | Msa1296830 | 0.831642 | 1.487136e-55 | -8.615850e-47 |
| Msa0236620 | Msa1303580 | 0.814709 | 1.341979e-51 | -8.615850e-47 |
| Msa0236620 | Msa1329540 | 0.809890 | 1.513202e-50 | -8.615850e-47 |
| Msa0236620 | Msa1331250 | 0.821917 | 3.129448e-53 | -8.615850e-47 |
| Msa0236620 | Msa1336560 | 0.816092 | 6.608618e-52 | -8.615850e-47 |
| Msa0236620 | Msa1343290 | 0.851887 | 6.620479e-61 | -8.615850e-47 |
| Msa0236620 | Msa1344310 | 0.809914 | 1.495362e-50 | -8.615850e-47 |
| Msa0236620 | Msa1351540 | 0.817822 | 2.702091e-52 | -8.615850e-47 |
| Msa0236620 | Msa1352890 | 0.825626 | 4.230958e-54 | -8.615850e-47 |
| Msa0236620 | Msa1365800 | 0.804958 | 1.682377e-49 | -8.615850e-47 |
| Msa0236620 | Msa1367590 | 0.801488 | 8.793619e-49 | -8.615850e-47 |
| Msa0236620 | Msa1368530 | 0.811311 | 7.457975e-51 | -8.615850e-47 |
| Msa0236620 | Msa1369190 | 0.820857 | 5.495526e-53 | -8.615850e-47 |
| Msa0236620 | Msa1376650 | 0.822449 | 2.354747e-53 | -8.615850e-47 |
| Msa0236620 | Msa1391480 | 0.826903 | 2.101004e-54 | -8.615850e-47 |
| Msa0236620 | Msa1398790 | 0.822312 | 2.534130e-53 | -8.615850e-47 |
| Msa0236620 | Msa1400820 | 0.803485 | 3.409363e-49 | -8.615850e-47 |
| Msa0236620 | Msa1427160 | 0.815683 | 8.155263e-52 | -8.615850e-47 |
| Msa0236620 | Msa1432480 | 0.819798 | 9.613523e-53 | -8.615850e-47 |
| Msa0236620 | Msa1454680 | 0.813690 | 2.253021e-51 | -8.615850e-47 |
| Msa0236620 | Msa1459960 | 0.910073 | 2.815836e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236620 | MtrunA17_Chr2g0285861 | 84.416 | 77 | 3 | 2 | 1 | 75 | 1 | 70 | 3.76e-38 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236620 | AT2G34585.1 | 76.190 | 42 | 10 | 0 | 1 | 42 | 1 | 42 | 9.84e-19 | 73.2 |
Find 19 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGTTAGGGGCGGGGTTGAG+TGG | 0.375759 | 2_2:+9560321 | None:intergenic |
| TCGTCGTCGGGATCGTAATC+AGG | 0.386527 | 2_2:+9560363 | None:intergenic |
| TTGACGACCTTGTTCGAGGC+AGG | 0.394231 | 2_2:+9560407 | None:intergenic |
| GCAGTGGTAGCAGTGATTCT+AGG | 0.395537 | 2_2:-9560459 | Msa0236620:CDS |
| GCAGCGGTGGTGGAGGCGAC+GGG | 0.399580 | 2_2:+9560297 | None:intergenic |
| AGCAGCGGTGGTGGAGGCGA+CGG | 0.425781 | 2_2:+9560296 | None:intergenic |
| AGGATTGAGATTGCGATCAA+TGG | 0.439079 | 2_2:+9560383 | None:intergenic |
| ACTGCGTTGTCTTCGTCGTC+GGG | 0.450375 | 2_2:+9560351 | None:intergenic |
| AACTGCGTTGTCTTCGTCGT+CGG | 0.458028 | 2_2:+9560350 | None:intergenic |
| AGTGAATACCACTTATGAAA+CGG | 0.507725 | 2_2:+9560269 | None:intergenic |
| CAGCGGTGGTGGAGGCGACG+GGG | 0.518735 | 2_2:+9560298 | None:intergenic |
| TGGCTTGACGACCTTGTTCG+AGG | 0.522648 | 2_2:+9560403 | None:intergenic |
| GGGATCATGGGAGCAATCAC+CGG | 0.545095 | 2_2:-9560492 | None:intergenic |
| TGACGACCTTGTTCGAGGCA+GGG | 0.551454 | 2_2:+9560408 | None:intergenic |
| TGTAAACCCTGCCTCGAACA+AGG | 0.577165 | 2_2:-9560414 | Msa0236620:CDS |
| TACCACTGCTATCACTGCAC+CGG | 0.586478 | 2_2:+9560473 | None:intergenic |
| AGCGGTGGTGGAGGCGACGG+GGG | 0.608456 | 2_2:+9560299 | None:intergenic |
| TGGTAGCAGTGATTCTAGGT+TGG | 0.618694 | 2_2:-9560455 | Msa0236620:CDS |
| CACCGGTGCAGTGATAGCAG+TGG | 0.664884 | 2_2:-9560475 | Msa0236620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAAACGGTTTTAGCAG+CGG | + | chr2_2:9560489-9560508 | None:intergenic | 35.0% |
| AGGATTGAGATTGCGATCAA+TGG | + | chr2_2:9560387-9560406 | None:intergenic | 40.0% | |
| TGGTAGCAGTGATTCTAGGT+TGG | - | chr2_2:9560312-9560331 | Msa0236620:CDS | 45.0% | |
| TACCACTGCTATCACTGCAC+CGG | + | chr2_2:9560297-9560316 | None:intergenic | 50.0% | |
| GCAGTGGTAGCAGTGATTCT+AGG | - | chr2_2:9560308-9560327 | Msa0236620:CDS | 50.0% | |
| TGTAAACCCTGCCTCGAACA+AGG | - | chr2_2:9560353-9560372 | Msa0236620:CDS | 50.0% | |
| AACTGCGTTGTCTTCGTCGT+CGG | + | chr2_2:9560420-9560439 | None:intergenic | 50.0% | |
| !! | TGAAACGGTTTTAGCAGCGG+TGG | + | chr2_2:9560486-9560505 | None:intergenic | 50.0% |
| TGACGACCTTGTTCGAGGCA+GGG | + | chr2_2:9560362-9560381 | None:intergenic | 55.0% | |
| TTGACGACCTTGTTCGAGGC+AGG | + | chr2_2:9560363-9560382 | None:intergenic | 55.0% | |
| TGGCTTGACGACCTTGTTCG+AGG | + | chr2_2:9560367-9560386 | None:intergenic | 55.0% | |
| TCGTCGTCGGGATCGTAATC+AGG | + | chr2_2:9560407-9560426 | None:intergenic | 55.0% | |
| ACTGCGTTGTCTTCGTCGTC+GGG | + | chr2_2:9560419-9560438 | None:intergenic | 55.0% | |
| !! | AACGGTTTTAGCAGCGGTGG+TGG | + | chr2_2:9560483-9560502 | None:intergenic | 55.0% |
| CACCGGTGCAGTGATAGCAG+TGG | - | chr2_2:9560292-9560311 | Msa0236620:CDS | 60.0% | |
| !! | GGTTTTAGCAGCGGTGGTGG+AGG | + | chr2_2:9560480-9560499 | None:intergenic | 60.0% |
| GCGTTAGGGGCGGGGTTGAG+TGG | + | chr2_2:9560449-9560468 | None:intergenic | 70.0% | |
| !! | TGGAGGCGACGGGGGCGTTA+GGG | + | chr2_2:9560463-9560482 | None:intergenic | 70.0% |
| !! | AGCAGCGGTGGTGGAGGCGA+CGG | + | chr2_2:9560474-9560493 | None:intergenic | 70.0% |
| !! | GGAGGCGACGGGGGCGTTAG+GGG | + | chr2_2:9560462-9560481 | None:intergenic | 75.0% |
| !! | GTGGAGGCGACGGGGGCGTT+AGG | + | chr2_2:9560464-9560483 | None:intergenic | 75.0% |
| !! | AGCGGTGGTGGAGGCGACGG+GGG | + | chr2_2:9560471-9560490 | None:intergenic | 75.0% |
| !! | CAGCGGTGGTGGAGGCGACG+GGG | + | chr2_2:9560472-9560491 | None:intergenic | 75.0% |
| !! | GCAGCGGTGGTGGAGGCGAC+GGG | + | chr2_2:9560473-9560492 | None:intergenic | 75.0% |
| !!! | CGACGGGGGCGTTAGGGGCG+GGG | + | chr2_2:9560457-9560476 | None:intergenic | 80.0% |
| !!! | GCGACGGGGGCGTTAGGGGC+GGG | + | chr2_2:9560458-9560477 | None:intergenic | 80.0% |
| !!! | GGCGACGGGGGCGTTAGGGG+CGG | + | chr2_2:9560459-9560478 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 9560281 | 9560508 | 9560281 | ID=Msa0236620;Name=Msa0236620 |
| chr2_2 | mRNA | 9560281 | 9560508 | 9560281 | ID=Msa0236620-mRNA-1;Parent=Msa0236620;Name=Msa0236620-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|75 |
| chr2_2 | exon | 9560281 | 9560508 | 9560281 | ID=Msa0236620-mRNA-1:exon:4155;Parent=Msa0236620-mRNA-1 |
| chr2_2 | CDS | 9560281 | 9560508 | 9560281 | ID=Msa0236620-mRNA-1:cds;Parent=Msa0236620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
