Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27987.t1 | XP_013446706.1 | 96 | 202 | 8 | 0 | 1 | 202 | 1 | 202 | 2.10E-94 | 355.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27987.t1 | P80470 | 53.1 | 209 | 78 | 8 | 1 | 201 | 1 | 197 | 1.1e-38 | 161.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27987.t1 | I3SG83 | 96.0 | 202 | 8 | 0 | 1 | 202 | 1 | 202 | 1.5e-94 | 355.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene27987 | 0.814416 | 1.56E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene27987 | 0.879145 | 1.58E-69 | -1.69E-46 |
| MS.gene049173 | MS.gene27987 | 0.850209 | 1.97E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene27987 | 0.891445 | 3.95E-74 | -1.69E-46 |
| MS.gene049222 | MS.gene27987 | 0.887755 | 1.08E-72 | -1.69E-46 |
| MS.gene049232 | MS.gene27987 | 0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene27987 | 0.91272 | 1.41E-83 | -1.69E-46 |
| MS.gene049320 | MS.gene27987 | 0.911941 | 3.44E-83 | -1.69E-46 |
| MS.gene049369 | MS.gene27987 | 0.825658 | 4.16E-54 | -1.69E-46 |
| MS.gene04939 | MS.gene27987 | 0.815726 | 7.98E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene27987 | 0.808379 | 3.19E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene27987 | 0.874361 | 7.17E-68 | -1.69E-46 |
| MS.gene049611 | MS.gene27987 | -0.811837 | 5.73E-51 | -1.69E-46 |
| MS.gene049615 | MS.gene27987 | 0.836753 | 7.78E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene27987 | 0.844103 | 9.30E-59 | -1.69E-46 |
| MS.gene049805 | MS.gene27987 | 0.85677 | 2.57E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene27987 | 0.855826 | 4.86E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene27987 | 0.895309 | 1.08E-75 | -1.69E-46 |
| MS.gene050165 | MS.gene27987 | 0.891941 | 2.51E-74 | -1.69E-46 |
| MS.gene050216 | MS.gene27987 | 0.812899 | 3.36E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene27987 | 0.822598 | 2.17E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene27987 | 0.895476 | 9.24E-76 | -1.69E-46 |
| MS.gene050432 | MS.gene27987 | 0.810644 | 1.04E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene27987 | 0.874238 | 7.90E-68 | -1.69E-46 |
| MS.gene050496 | MS.gene27987 | 0.825146 | 5.49E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene27987 | 0.873141 | 1.85E-67 | -1.69E-46 |
| MS.gene050518 | MS.gene27987 | 0.881521 | 2.24E-70 | -1.69E-46 |
| MS.gene050538 | MS.gene27987 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene27987 | 0.834116 | 3.61E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene27987 | 0.855511 | 6.01E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene27987 | 0.909492 | 5.36E-82 | -1.69E-46 |
| MS.gene050662 | MS.gene27987 | 0.83049 | 2.85E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene27987 | 0.898085 | 7.49E-77 | -1.69E-46 |
| MS.gene050686 | MS.gene27987 | 0.839408 | 1.61E-57 | -1.69E-46 |
| MS.gene050690 | MS.gene27987 | 0.834045 | 3.76E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene27987 | 0.906701 | 1.12E-80 | -1.69E-46 |
| MS.gene050747 | MS.gene27987 | 0.832429 | 9.50E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene27987 | 0.837549 | 4.87E-57 | -1.69E-46 |
| MS.gene050770 | MS.gene27987 | 0.840572 | 8.02E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene27987 | 0.909246 | 7.04E-82 | -1.69E-46 |
| MS.gene05079 | MS.gene27987 | -0.808234 | 3.42E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene27987 | 0.838354 | 3.02E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene27987 | 0.820355 | 7.16E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene27987 | 0.81895 | 1.50E-52 | -1.69E-46 |
| MS.gene050876 | MS.gene27987 | 0.814616 | 1.41E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene27987 | 0.806665 | 7.37E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene27987 | 0.826432 | 2.72E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene27987 | 0.875533 | 2.86E-68 | -1.69E-46 |
| MS.gene05100 | MS.gene27987 | 0.867311 | 1.50E-65 | -1.69E-46 |
| MS.gene05105 | MS.gene27987 | 0.811056 | 8.47E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene27987 | 0.883404 | 4.62E-71 | -1.69E-46 |
| MS.gene051268 | MS.gene27987 | 0.817312 | 3.52E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene27987 | 0.850795 | 1.35E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene27987 | 0.823889 | 1.09E-53 | -1.69E-46 |
| MS.gene051434 | MS.gene27987 | 0.819423 | 1.17E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene27987 | 0.841948 | 3.48E-58 | -1.69E-46 |
| MS.gene051617 | MS.gene27987 | 0.812221 | 4.73E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene27987 | 0.862001 | 6.90E-64 | -1.69E-46 |
| MS.gene051692 | MS.gene27987 | 0.836131 | 1.12E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene27987 | 0.833309 | 5.74E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene27987 | 0.904162 | 1.64E-79 | -1.69E-46 |
| MS.gene051838 | MS.gene27987 | 0.808524 | 2.97E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene27987 | 0.863695 | 2.07E-64 | -1.69E-46 |
| MS.gene051874 | MS.gene27987 | 0.815177 | 1.06E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene27987 | 0.880565 | 4.94E-70 | -1.69E-46 |
| MS.gene052164 | MS.gene27987 | 0.814792 | 1.29E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene27987 | 0.902817 | 6.57E-79 | -1.69E-46 |
| MS.gene052290 | MS.gene27987 | 0.823864 | 1.10E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene27987 | 0.868756 | 5.15E-66 | -1.69E-46 |
| MS.gene052482 | MS.gene27987 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene27987 | 0.836673 | 8.15E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene27987 | 0.823873 | 1.10E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene27987 | 0.82819 | 1.03E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene27987 | 0.823175 | 1.60E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene27987 | 0.846664 | 1.88E-59 | -1.69E-46 |
| MS.gene052805 | MS.gene27987 | -0.803427 | 3.50E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene27987 | 0.84291 | 1.94E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene27987 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene27987 | 0.81535 | 9.67E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene27987 | 0.830431 | 2.95E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene27987 | 0.839122 | 1.91E-57 | -1.69E-46 |
| MS.gene052916 | MS.gene27987 | 0.857053 | 2.12E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene27987 | 0.847111 | 1.42E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene27987 | 0.843184 | 1.64E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene27987 | 0.813508 | 2.47E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene27987 | 0.861196 | 1.22E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene27987 | 0.838033 | 3.66E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene27987 | 0.876915 | 9.55E-69 | -1.69E-46 |
| MS.gene053213 | MS.gene27987 | 0.907869 | 3.18E-81 | -1.69E-46 |
| MS.gene053286 | MS.gene27987 | 0.905545 | 3.83E-80 | -1.69E-46 |
| MS.gene053322 | MS.gene27987 | 0.857892 | 1.20E-62 | -1.69E-46 |
| MS.gene053384 | MS.gene27987 | 0.810026 | 1.41E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene27987 | -0.80584 | 1.10E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene27987 | 0.829849 | 4.09E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene27987 | 0.858684 | 6.96E-63 | -1.69E-46 |
| MS.gene053479 | MS.gene27987 | 0.848275 | 6.80E-60 | -1.69E-46 |
| MS.gene053480 | MS.gene27987 | 0.806842 | 6.76E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene27987 | 0.855599 | 5.66E-62 | -1.69E-46 |
| MS.gene053632 | MS.gene27987 | 0.889406 | 2.49E-73 | -1.69E-46 |
| MS.gene053813 | MS.gene27987 | 0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene27987 | 0.836777 | 7.67E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene27987 | 0.874486 | 6.51E-68 | -1.69E-46 |
| MS.gene054376 | MS.gene27987 | 0.82938 | 5.32E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene27987 | 0.843849 | 1.09E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene27987 | 0.913444 | 6.11E-84 | -1.69E-46 |
| MS.gene054642 | MS.gene27987 | 0.91893 | 8.48E-87 | -1.69E-46 |
| MS.gene054706 | MS.gene27987 | -0.804802 | 1.81E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene27987 | 0.806237 | 9.07E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene27987 | 0.810823 | 9.52E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene27987 | 0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene054804 | MS.gene27987 | 0.814473 | 1.51E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene27987 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene27987 | 0.889929 | 1.56E-73 | -1.69E-46 |
| MS.gene05505 | MS.gene27987 | 0.843181 | 1.64E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene27987 | -0.82369 | 1.21E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene27987 | 0.866787 | 2.21E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene27987 | 0.851806 | 6.98E-61 | -1.69E-46 |
| MS.gene055224 | MS.gene27987 | 0.824047 | 9.97E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene27987 | 0.82515 | 5.48E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene27987 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene27987 | 0.913311 | 7.13E-84 | -1.69E-46 |
| MS.gene055397 | MS.gene27987 | 0.861982 | 6.99E-64 | -1.69E-46 |
| MS.gene055499 | MS.gene27987 | 0.852084 | 5.82E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene27987 | 0.887911 | 9.41E-73 | -1.69E-46 |
| MS.gene055577 | MS.gene27987 | 0.8811 | 3.18E-70 | -1.69E-46 |
| MS.gene055634 | MS.gene27987 | 0.815407 | 9.39E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene27987 | 0.864572 | 1.10E-64 | -1.69E-46 |
| MS.gene055638 | MS.gene27987 | 0.871638 | 5.87E-67 | -1.69E-46 |
| MS.gene055647 | MS.gene27987 | 0.880375 | 5.78E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene27987 | 0.884865 | 1.33E-71 | -1.69E-46 |
| MS.gene055748 | MS.gene27987 | 0.837392 | 5.34E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene27987 | 0.825897 | 3.65E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene27987 | 0.840128 | 1.05E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene27987 | 0.831186 | 1.93E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene27987 | 0.81557 | 8.64E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene27987 | 0.91006 | 2.86E-82 | -1.69E-46 |
| MS.gene055941 | MS.gene27987 | 0.877961 | 4.13E-69 | -1.69E-46 |
| MS.gene055956 | MS.gene27987 | -0.837714 | 4.42E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene27987 | 0.843855 | 1.08E-58 | -1.69E-46 |
| MS.gene056359 | MS.gene27987 | -0.805822 | 1.11E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene27987 | 0.905045 | 6.50E-80 | -1.69E-46 |
| MS.gene056449 | MS.gene27987 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene27987 | 0.841899 | 3.59E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene27987 | 0.860403 | 2.12E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene27987 | 0.873176 | 1.80E-67 | -1.69E-46 |
| MS.gene056549 | MS.gene27987 | 0.824528 | 7.69E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene27987 | 0.808232 | 3.43E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene27987 | 0.835286 | 1.83E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene27987 | 0.928783 | 1.77E-92 | -1.69E-46 |
| MS.gene05666 | MS.gene27987 | 0.82384 | 1.12E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene27987 | 0.843958 | 1.02E-58 | -1.69E-46 |
| MS.gene056898 | MS.gene27987 | 0.819951 | 8.87E-53 | -1.69E-46 |
| MS.gene056946 | MS.gene27987 | 0.835927 | 1.26E-56 | -1.69E-46 |
| MS.gene056947 | MS.gene27987 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene27987 | 0.859002 | 5.59E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene27987 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene27987 | 0.88594 | 5.27E-72 | -1.69E-46 |
| MS.gene057246 | MS.gene27987 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene27987 | 0.898598 | 4.54E-77 | -1.69E-46 |
| MS.gene057332 | MS.gene27987 | 0.82143 | 4.06E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene27987 | 0.80305 | 4.19E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene27987 | 0.89984 | 1.33E-77 | -1.69E-46 |
| MS.gene057658 | MS.gene27987 | 0.827421 | 1.58E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene27987 | 0.823158 | 1.61E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene27987 | 0.859891 | 3.02E-63 | -1.69E-46 |
| MS.gene057857 | MS.gene27987 | 0.81311 | 3.02E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene27987 | 0.883373 | 4.74E-71 | -1.69E-46 |
| MS.gene058006 | MS.gene27987 | 0.822712 | 2.05E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene27987 | 0.872475 | 3.09E-67 | -1.69E-46 |
| MS.gene058323 | MS.gene27987 | 0.823929 | 1.06E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene27987 | 0.811467 | 6.90E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene27987 | 0.823325 | 1.47E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene27987 | 0.918032 | 2.57E-86 | -1.69E-46 |
| MS.gene058544 | MS.gene27987 | 0.856012 | 4.29E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene27987 | 0.894387 | 2.59E-75 | -1.69E-46 |
| MS.gene058773 | MS.gene27987 | 0.90467 | 9.63E-80 | -1.69E-46 |
| MS.gene058838 | MS.gene27987 | 0.854458 | 1.21E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene27987 | 0.803691 | 3.09E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene27987 | 0.894431 | 2.48E-75 | -1.69E-46 |
| MS.gene059023 | MS.gene27987 | 0.862756 | 4.05E-64 | -1.69E-46 |
| MS.gene059029 | MS.gene27987 | 0.873755 | 1.15E-67 | -1.69E-46 |
| MS.gene059079 | MS.gene27987 | 0.807586 | 4.70E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene27987 | 0.863884 | 1.81E-64 | -1.69E-46 |
| MS.gene05934 | MS.gene27987 | 0.840281 | 9.56E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene27987 | 0.828903 | 6.94E-55 | -1.69E-46 |
| MS.gene059455 | MS.gene27987 | 0.810801 | 9.62E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene27987 | 0.832644 | 8.41E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene27987 | 0.911062 | 9.30E-83 | -1.69E-46 |
| MS.gene059711 | MS.gene27987 | 0.819413 | 1.18E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene27987 | 0.897417 | 1.43E-76 | -1.69E-46 |
| MS.gene059756 | MS.gene27987 | 0.847938 | 8.42E-60 | -1.69E-46 |
| MS.gene059801 | MS.gene27987 | 0.831372 | 1.73E-55 | -1.69E-46 |
| MS.gene059858 | MS.gene27987 | 0.802923 | 4.46E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene27987 | 0.860956 | 1.44E-63 | -1.69E-46 |
| MS.gene059902 | MS.gene27987 | 0.856689 | 2.71E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene27987 | 0.862995 | 3.41E-64 | -1.69E-46 |
| MS.gene060193 | MS.gene27987 | 0.856593 | 2.90E-62 | -1.69E-46 |
| MS.gene060341 | MS.gene27987 | 0.820615 | 6.25E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene27987 | 0.84603 | 2.81E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene27987 | 0.857117 | 2.03E-62 | -1.69E-46 |
| MS.gene060727 | MS.gene27987 | 0.813036 | 3.14E-51 | -1.69E-46 |
| MS.gene060728 | MS.gene27987 | 0.832063 | 1.17E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene27987 | 0.869473 | 3.02E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene27987 | 0.803408 | 3.54E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene27987 | 0.841933 | 3.52E-58 | -1.69E-46 |
| MS.gene060804 | MS.gene27987 | 0.872437 | 3.18E-67 | -1.69E-46 |
| MS.gene060818 | MS.gene27987 | 0.854733 | 1.01E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene27987 | 0.844451 | 7.50E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene27987 | 0.822736 | 2.02E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene27987 | 0.85983 | 3.15E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene27987 | 0.859032 | 5.48E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene27987 | 0.856259 | 3.63E-62 | -1.69E-46 |
| MS.gene061134 | MS.gene27987 | 0.850595 | 1.53E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene27987 | 0.875219 | 3.66E-68 | -1.69E-46 |
| MS.gene061171 | MS.gene27987 | 0.804996 | 1.65E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene27987 | 0.881649 | 2.01E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27987.t1 | MTR_8g089610 | 96.040 | 202 | 8 | 0 | 1 | 202 | 1 | 202 | 2.22e-120 | 339 |
| MS.gene27987.t1 | MTR_3g086230 | 64.390 | 205 | 59 | 10 | 1 | 201 | 1 | 195 | 1.03e-63 | 196 |
| MS.gene27987.t1 | MTR_3g086230 | 73.333 | 45 | 11 | 1 | 85 | 129 | 154 | 197 | 3.13e-13 | 65.9 |
| MS.gene27987.t1 | MTR_2g046810 | 74.172 | 151 | 17 | 4 | 10 | 158 | 1 | 131 | 1.31e-55 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27987.t1 | AT1G67740 | 62.420 | 157 | 55 | 2 | 47 | 201 | 32 | 186 | 3.45e-49 | 159 |
| MS.gene27987.t1 | AT1G67740 | 50.769 | 65 | 30 | 2 | 140 | 202 | 51 | 115 | 3.06e-12 | 63.2 |
Find 56 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTTTGTAATGAGCTTATT+TGG | 0.218893 | 4.4:-11725640 | None:intergenic |
| GGTGGTGGGTTAGCAGCTTC+AGG | 0.222861 | 4.4:+11725976 | MS.gene27987:CDS |
| CAAGCTATGGCTGGAATTAA+TGG | 0.225855 | 4.4:-11725868 | None:intergenic |
| AAGCTGCTGGTAGTGATAAT+AGG | 0.242204 | 4.4:+11726049 | MS.gene27987:CDS |
| TGGTAGCACCAGCTATTCTT+TGG | 0.258357 | 4.4:+11726091 | MS.gene27987:CDS |
| AAAGGAGTTATCATTGGTTT+AGG | 0.300660 | 4.4:+11725949 | MS.gene27987:CDS |
| AACCGTATGCGTAACGATAA+AGG | 0.307985 | 4.4:+11725931 | MS.gene27987:CDS |
| ACTGTCTCATTCTGTTGATT+TGG | 0.310184 | 4.4:-11726146 | None:intergenic |
| GTTATCATTGGTTTAGGTCT+TGG | 0.319441 | 4.4:+11725955 | MS.gene27987:CDS |
| CGTTACGCATACGGTTGATT+TGG | 0.341217 | 4.4:-11725924 | None:intergenic |
| AGCTGCTGGTAGTGATAATA+GGG | 0.355815 | 4.4:+11726050 | MS.gene27987:CDS |
| GGTTTGTAATGAGCTTATTT+GGG | 0.370406 | 4.4:-11725639 | None:intergenic |
| CCTGTTGTGGCAATTCCCTT+TGG | 0.390126 | 4.4:-11725694 | None:intergenic |
| GGTAGCACCAGCTATTCTTT+GGG | 0.391322 | 4.4:+11726092 | MS.gene27987:CDS |
| GTGGTGGGTTAGCAGCTTCA+GGG | 0.392842 | 4.4:+11725977 | MS.gene27987:CDS |
| CTCCTTTATCGTTACGCATA+CGG | 0.399509 | 4.4:-11725933 | None:intergenic |
| ATTGGTTTAGGTCTTGGTGG+TGG | 0.402929 | 4.4:+11725961 | MS.gene27987:CDS |
| AACGATAAAGGAGTTATCAT+TGG | 0.410305 | 4.4:+11725943 | MS.gene27987:CDS |
| TTGAGGGAAATGAGGGAAGT+GGG | 0.420587 | 4.4:-11725661 | None:intergenic |
| GGGTCAGCTTCTCTTGTTTG+TGG | 0.421686 | 4.4:+11726071 | MS.gene27987:CDS |
| CTTTGGAAGAAGGTTCTTGA+GGG | 0.435326 | 4.4:-11725677 | None:intergenic |
| CATTAATTCCAGCCATAGCT+TGG | 0.438157 | 4.4:+11725869 | MS.gene27987:CDS |
| AGCTAGTGCTGTTCCTGCTA+TGG | 0.441899 | 4.4:-11725737 | None:intergenic |
| CAAGGACTTTGAGTTGATCA+TGG | 0.443749 | 4.4:-11725587 | None:intergenic |
| TGGCAATTCCCTTTGGAAGA+AGG | 0.444343 | 4.4:-11725687 | None:intergenic |
| CTCAAGAACCTTCTTCCAAA+GGG | 0.458123 | 4.4:+11725679 | MS.gene27987:CDS |
| ATCATTGGTTTAGGTCTTGG+TGG | 0.458537 | 4.4:+11725958 | MS.gene27987:CDS |
| CCAAAGGGAATTGCCACAAC+AGG | 0.466016 | 4.4:+11725694 | MS.gene27987:CDS |
| TTATTTGGGTTGTGGAACTT+TGG | 0.470489 | 4.4:-11725625 | None:intergenic |
| TTGGTTTAGGTCTTGGTGGT+GGG | 0.471445 | 4.4:+11725962 | MS.gene27987:CDS |
| TAATGAGCTTATTTGGGTTG+TGG | 0.472958 | 4.4:-11725633 | None:intergenic |
| ATTAATTCCAGCCATAGCTT+GGG | 0.480687 | 4.4:+11725870 | MS.gene27987:CDS |
| CTGTTGATTTGGTTAAGAGC+AGG | 0.484319 | 4.4:-11726135 | None:intergenic |
| TGGTGAACTAGTAGTGTTCA+AGG | 0.485829 | 4.4:-11725605 | None:intergenic |
| TAGTTTAATGTTTCCTGTTG+TGG | 0.486608 | 4.4:-11725707 | None:intergenic |
| TAAAGAACCCAAAGAATAGC+TGG | 0.496379 | 4.4:-11726099 | None:intergenic |
| CCTCAAGAACCTTCTTCCAA+AGG | 0.498567 | 4.4:+11725678 | MS.gene27987:CDS |
| AAGGTTCTTGAGGGAAATGA+GGG | 0.499781 | 4.4:-11725668 | None:intergenic |
| ATAGCAGGAACAGCACTAGC+TGG | 0.506700 | 4.4:+11725739 | MS.gene27987:CDS |
| GATCATGGTCATTGCAATGA+TGG | 0.513443 | 4.4:-11725572 | None:intergenic |
| CTTGAGGGAAATGAGGGAAG+TGG | 0.514770 | 4.4:-11725662 | None:intergenic |
| GCTGCAATTGCTGAAGCTGC+TGG | 0.514881 | 4.4:+11726036 | MS.gene27987:CDS |
| TACAGAACCCAAGCTATGGC+TGG | 0.516463 | 4.4:-11725877 | None:intergenic |
| TGAGGGAAATGAGGGAAGTG+GGG | 0.522481 | 4.4:-11725660 | None:intergenic |
| TGCTGCAAAAGCTGCATCAC+AGG | 0.523420 | 4.4:-11725785 | None:intergenic |
| GAAGGTTCTTGAGGGAAATG+AGG | 0.523923 | 4.4:-11725669 | None:intergenic |
| AGATGCAATGGCTAGTGAAA+TGG | 0.532397 | 4.4:+11726014 | MS.gene27987:CDS |
| CGGTTGATTTGGTTAAGTGC+TGG | 0.533998 | 4.4:-11725913 | None:intergenic |
| CCTTTGGAAGAAGGTTCTTG+AGG | 0.537577 | 4.4:-11725678 | None:intergenic |
| AAACTATCAACTTCCATAGC+AGG | 0.544376 | 4.4:+11725724 | MS.gene27987:CDS |
| GTTGTACAGAACCCAAGCTA+TGG | 0.571265 | 4.4:-11725881 | None:intergenic |
| CAAATAGCTGAAATAGCAGA+AGG | 0.608735 | 4.4:+11725811 | MS.gene27987:CDS |
| TGTGTCAACACAAGATGCAA+TGG | 0.611402 | 4.4:+11726002 | MS.gene27987:CDS |
| GCTGCTGGTAGTGATAATAG+GGG | 0.720408 | 4.4:+11726051 | MS.gene27987:CDS |
| GTAACAGAAGTGCTAAACCA+CGG | 0.728265 | 4.4:-11725846 | None:intergenic |
| GAAGGATCATCAGACAACCG+TGG | 0.746201 | 4.4:+11725829 | MS.gene27987:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AACGATAAAGGAGTTATCAT+TGG | + | chr4.4:11725943-11725962 | MS.gene27987:CDS | 30.0% | |
| GGTTTGTAATGAGCTTATTT+GGG | - | chr4.4:11725642-11725661 | None:intergenic | 30.0% | |
| TAGTTTAATGTTTCCTGTTG+TGG | - | chr4.4:11725710-11725729 | None:intergenic | 30.0% | |
| !! | AAAGGAGTTATCATTGGTTT+AGG | + | chr4.4:11725949-11725968 | MS.gene27987:CDS | 30.0% |
| AAACTATCAACTTCCATAGC+AGG | + | chr4.4:11725724-11725743 | MS.gene27987:CDS | 35.0% | |
| ATTAATTCCAGCCATAGCTT+GGG | + | chr4.4:11725870-11725889 | MS.gene27987:CDS | 35.0% | |
| CAAATAGCTGAAATAGCAGA+AGG | + | chr4.4:11725811-11725830 | MS.gene27987:CDS | 35.0% | |
| GGGTTTGTAATGAGCTTATT+TGG | - | chr4.4:11725643-11725662 | None:intergenic | 35.0% | |
| TAAAGAACCCAAAGAATAGC+TGG | - | chr4.4:11726102-11726121 | None:intergenic | 35.0% | |
| ! | ACTGTCTCATTCTGTTGATT+TGG | - | chr4.4:11726149-11726168 | None:intergenic | 35.0% |
| !! | GTTATCATTGGTTTAGGTCT+TGG | + | chr4.4:11725955-11725974 | MS.gene27987:CDS | 35.0% |
| !! | TAATGAGCTTATTTGGGTTG+TGG | - | chr4.4:11725636-11725655 | None:intergenic | 35.0% |
| !! | TTATTTGGGTTGTGGAACTT+TGG | - | chr4.4:11725628-11725647 | None:intergenic | 35.0% |
| AACCGTATGCGTAACGATAA+AGG | + | chr4.4:11725931-11725950 | MS.gene27987:CDS | 40.0% | |
| AAGGTTCTTGAGGGAAATGA+GGG | - | chr4.4:11725671-11725690 | None:intergenic | 40.0% | |
| AGATGCAATGGCTAGTGAAA+TGG | + | chr4.4:11726014-11726033 | MS.gene27987:CDS | 40.0% | |
| CAAGCTATGGCTGGAATTAA+TGG | - | chr4.4:11725871-11725890 | None:intergenic | 40.0% | |
| CATTAATTCCAGCCATAGCT+TGG | + | chr4.4:11725869-11725888 | MS.gene27987:CDS | 40.0% | |
| CTCAAGAACCTTCTTCCAAA+GGG | + | chr4.4:11725679-11725698 | MS.gene27987:CDS | 40.0% | |
| CTCCTTTATCGTTACGCATA+CGG | - | chr4.4:11725936-11725955 | None:intergenic | 40.0% | |
| GATCATGGTCATTGCAATGA+TGG | - | chr4.4:11725575-11725594 | None:intergenic | 40.0% | |
| TGGTGAACTAGTAGTGTTCA+AGG | - | chr4.4:11725608-11725627 | None:intergenic | 40.0% | |
| TGTGTCAACACAAGATGCAA+TGG | + | chr4.4:11726002-11726021 | MS.gene27987:CDS | 40.0% | |
| ! | AAGCTGCTGGTAGTGATAAT+AGG | + | chr4.4:11726049-11726068 | MS.gene27987:CDS | 40.0% |
| ! | AGCTGCTGGTAGTGATAATA+GGG | + | chr4.4:11726050-11726069 | MS.gene27987:CDS | 40.0% |
| ! | CTTTGGAAGAAGGTTCTTGA+GGG | - | chr4.4:11725680-11725699 | None:intergenic | 40.0% |
| !! | ATCATTGGTTTAGGTCTTGG+TGG | + | chr4.4:11725958-11725977 | MS.gene27987:CDS | 40.0% |
| !! | CAAGGACTTTGAGTTGATCA+TGG | - | chr4.4:11725590-11725609 | None:intergenic | 40.0% |
| !! | CTGTTGATTTGGTTAAGAGC+AGG | - | chr4.4:11726138-11726157 | None:intergenic | 40.0% |
| !! | GTAACAGAAGTGCTAAACCA+CGG | - | chr4.4:11725849-11725868 | None:intergenic | 40.0% |
| CCTCAAGAACCTTCTTCCAA+AGG | + | chr4.4:11725678-11725697 | MS.gene27987:CDS | 45.0% | |
| CGTTACGCATACGGTTGATT+TGG | - | chr4.4:11725927-11725946 | None:intergenic | 45.0% | |
| GAAGGTTCTTGAGGGAAATG+AGG | - | chr4.4:11725672-11725691 | None:intergenic | 45.0% | |
| GGTAGCACCAGCTATTCTTT+GGG | + | chr4.4:11726092-11726111 | MS.gene27987:CDS | 45.0% | |
| GTTGTACAGAACCCAAGCTA+TGG | - | chr4.4:11725884-11725903 | None:intergenic | 45.0% | |
| TGGTAGCACCAGCTATTCTT+TGG | + | chr4.4:11726091-11726110 | MS.gene27987:CDS | 45.0% | |
| TTGAGGGAAATGAGGGAAGT+GGG | - | chr4.4:11725664-11725683 | None:intergenic | 45.0% | |
| ! | ATTGGTTTAGGTCTTGGTGG+TGG | + | chr4.4:11725961-11725980 | MS.gene27987:CDS | 45.0% |
| ! | CCTTTGGAAGAAGGTTCTTG+AGG | - | chr4.4:11725681-11725700 | None:intergenic | 45.0% |
| ! | GCTGCTGGTAGTGATAATAG+GGG | + | chr4.4:11726051-11726070 | MS.gene27987:CDS | 45.0% |
| ! | TGGCAATTCCCTTTGGAAGA+AGG | - | chr4.4:11725690-11725709 | None:intergenic | 45.0% |
| ! | TTGGTTTAGGTCTTGGTGGT+GGG | + | chr4.4:11725962-11725981 | MS.gene27987:CDS | 45.0% |
| !! | CGGTTGATTTGGTTAAGTGC+TGG | - | chr4.4:11725916-11725935 | None:intergenic | 45.0% |
| ATAGCAGGAACAGCACTAGC+TGG | + | chr4.4:11725739-11725758 | MS.gene27987:CDS | 50.0% | |
| CCAAAGGGAATTGCCACAAC+AGG | + | chr4.4:11725694-11725713 | MS.gene27987:CDS | 50.0% | |
| CCTGTTGTGGCAATTCCCTT+TGG | - | chr4.4:11725697-11725716 | None:intergenic | 50.0% | |
| CTTGAGGGAAATGAGGGAAG+TGG | - | chr4.4:11725665-11725684 | None:intergenic | 50.0% | |
| GAAGGATCATCAGACAACCG+TGG | + | chr4.4:11725829-11725848 | MS.gene27987:CDS | 50.0% | |
| TACAGAACCCAAGCTATGGC+TGG | - | chr4.4:11725880-11725899 | None:intergenic | 50.0% | |
| TGAGGGAAATGAGGGAAGTG+GGG | - | chr4.4:11725663-11725682 | None:intergenic | 50.0% | |
| TGCTGCAAAAGCTGCATCAC+AGG | - | chr4.4:11725788-11725807 | None:intergenic | 50.0% | |
| ! | AGCTAGTGCTGTTCCTGCTA+TGG | - | chr4.4:11725740-11725759 | None:intergenic | 50.0% |
| ! | GGGTCAGCTTCTCTTGTTTG+TGG | + | chr4.4:11726071-11726090 | MS.gene27987:CDS | 50.0% |
| GCTGCAATTGCTGAAGCTGC+TGG | + | chr4.4:11726036-11726055 | MS.gene27987:CDS | 55.0% | |
| !! | GTGGTGGGTTAGCAGCTTCA+GGG | + | chr4.4:11725977-11725996 | MS.gene27987:CDS | 55.0% |
| !! | GGTGGTGGGTTAGCAGCTTC+AGG | + | chr4.4:11725976-11725995 | MS.gene27987:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 11725562 | 11726170 | 11725562 | ID=MS.gene27987 |
| chr4.4 | mRNA | 11725562 | 11726170 | 11725562 | ID=MS.gene27987.t1;Parent=MS.gene27987 |
| chr4.4 | exon | 11725562 | 11726170 | 11725562 | ID=MS.gene27987.t1.exon1;Parent=MS.gene27987.t1 |
| chr4.4 | CDS | 11725562 | 11726170 | 11725562 | ID=cds.MS.gene27987.t1;Parent=MS.gene27987.t1 |
| Gene Sequence |
| Protein sequence |
