Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36341.t1 | XP_003597703.1 | 97.9 | 191 | 4 | 0 | 1 | 191 | 1 | 191 | 6.80E-103 | 383.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36341.t1 | Q9LU21 | 64.6 | 181 | 50 | 5 | 18 | 185 | 20 | 199 | 1.3e-57 | 224.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36341.t1 | G7IUN0 | 97.9 | 191 | 4 | 0 | 1 | 191 | 1 | 191 | 4.9e-103 | 383.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene36341 | 0.839322 | 1.70E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene36341 | 0.854731 | 1.01E-61 | -1.69E-46 |
| MS.gene049173 | MS.gene36341 | 0.818795 | 1.63E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene36341 | 0.869357 | 3.29E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene36341 | 0.874349 | 7.24E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene36341 | 0.823439 | 1.38E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene36341 | 0.901482 | 2.56E-78 | -1.69E-46 |
| MS.gene049320 | MS.gene36341 | 0.8938 | 4.49E-75 | -1.69E-46 |
| MS.gene049351 | MS.gene36341 | 0.811662 | 6.26E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene36341 | 0.815448 | 9.20E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene36341 | 0.873588 | 1.31E-67 | -1.69E-46 |
| MS.gene049609 | MS.gene36341 | 0.899855 | 1.31E-77 | -1.69E-46 |
| MS.gene049614 | MS.gene36341 | 0.837787 | 4.23E-57 | -1.69E-46 |
| MS.gene049615 | MS.gene36341 | 0.828746 | 7.57E-55 | -1.69E-46 |
| MS.gene049627 | MS.gene36341 | 0.823334 | 1.46E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene36341 | 0.819744 | 9.89E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene36341 | 0.813167 | 2.94E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene36341 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene36341 | 0.878837 | 2.03E-69 | -1.69E-46 |
| MS.gene05010 | MS.gene36341 | 0.856123 | 3.98E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene36341 | 0.880173 | 6.83E-70 | -1.69E-46 |
| MS.gene050165 | MS.gene36341 | 0.858996 | 5.61E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene36341 | 0.811456 | 6.94E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene36341 | 0.866453 | 2.82E-65 | -1.69E-46 |
| MS.gene050353 | MS.gene36341 | -0.825842 | 3.76E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene36341 | 0.837076 | 6.43E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene36341 | 0.86777 | 1.07E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene36341 | 0.865873 | 4.31E-65 | -1.69E-46 |
| MS.gene050520 | MS.gene36341 | 0.841749 | 3.93E-58 | -1.69E-46 |
| MS.gene050538 | MS.gene36341 | 0.826806 | 2.22E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene36341 | 0.893198 | 7.86E-75 | -1.69E-46 |
| MS.gene050612 | MS.gene36341 | 0.863791 | 1.93E-64 | -1.69E-46 |
| MS.gene050662 | MS.gene36341 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene36341 | 0.865365 | 6.22E-65 | -1.69E-46 |
| MS.gene050686 | MS.gene36341 | 0.817524 | 3.15E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene36341 | 0.872579 | 2.85E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene36341 | 0.87686 | 9.98E-69 | -1.69E-46 |
| MS.gene050767 | MS.gene36341 | 0.87298 | 2.10E-67 | -1.69E-46 |
| MS.gene050770 | MS.gene36341 | 0.876204 | 1.68E-68 | -1.69E-46 |
| MS.gene050772 | MS.gene36341 | 0.925929 | 9.41E-91 | -1.69E-46 |
| MS.gene05080 | MS.gene36341 | 0.812542 | 4.02E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene36341 | 0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene36341 | 0.814392 | 1.58E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene36341 | 0.877915 | 4.28E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene36341 | 0.868861 | 4.76E-66 | -1.69E-46 |
| MS.gene05100 | MS.gene36341 | 0.850663 | 1.47E-60 | -1.69E-46 |
| MS.gene05101 | MS.gene36341 | 0.8089 | 2.47E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene36341 | 0.848979 | 4.34E-60 | -1.69E-46 |
| MS.gene051228 | MS.gene36341 | 0.854996 | 8.48E-62 | -1.69E-46 |
| MS.gene051255 | MS.gene36341 | 0.825978 | 3.49E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene36341 | 0.870373 | 1.53E-66 | -1.69E-46 |
| MS.gene051434 | MS.gene36341 | 0.811741 | 6.02E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene36341 | 0.862864 | 3.75E-64 | -1.69E-46 |
| MS.gene051666 | MS.gene36341 | 0.850623 | 1.51E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene36341 | 0.83946 | 1.56E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene36341 | 0.865136 | 7.35E-65 | -1.69E-46 |
| MS.gene051810 | MS.gene36341 | 0.880121 | 7.12E-70 | -1.69E-46 |
| MS.gene051858 | MS.gene36341 | 0.872332 | 3.45E-67 | -1.69E-46 |
| MS.gene051877 | MS.gene36341 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene36341 | 0.81691 | 4.33E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene36341 | 0.88158 | 2.13E-70 | -1.69E-46 |
| MS.gene052290 | MS.gene36341 | 0.814262 | 1.69E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene36341 | 0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene052322 | MS.gene36341 | 0.834817 | 2.41E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene36341 | 0.869543 | 2.86E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene36341 | 0.858167 | 9.92E-63 | -1.69E-46 |
| MS.gene052481 | MS.gene36341 | 0.80687 | 6.67E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene36341 | 0.838318 | 3.09E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene36341 | 0.801997 | 6.91E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene36341 | 0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene36341 | 0.827511 | 1.50E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene36341 | 0.811648 | 6.30E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene36341 | 0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene052508 | MS.gene36341 | 0.808083 | 3.69E-50 | -1.69E-46 |
| MS.gene052510 | MS.gene36341 | 0.825308 | 5.03E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene36341 | 0.887292 | 1.62E-72 | -1.69E-46 |
| MS.gene052670 | MS.gene36341 | 0.803983 | 2.69E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene36341 | 0.833614 | 4.82E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene36341 | 0.816203 | 6.24E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene36341 | 0.808213 | 3.46E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene36341 | 0.834599 | 2.73E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene36341 | 0.837025 | 6.63E-57 | -1.69E-46 |
| MS.gene052916 | MS.gene36341 | 0.862607 | 4.50E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene36341 | 0.825364 | 4.88E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene36341 | 0.858637 | 7.19E-63 | -1.69E-46 |
| MS.gene053018 | MS.gene36341 | 0.824179 | 9.29E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene36341 | 0.826345 | 2.85E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene36341 | 0.855911 | 4.59E-62 | -1.69E-46 |
| MS.gene053107 | MS.gene36341 | 0.838193 | 3.33E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene36341 | 0.854491 | 1.19E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene36341 | 0.894574 | 2.17E-75 | -1.69E-46 |
| MS.gene053209 | MS.gene36341 | 0.814609 | 1.41E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene36341 | 0.928103 | 4.63E-92 | -1.69E-46 |
| MS.gene053286 | MS.gene36341 | 0.920556 | 1.10E-87 | -1.69E-46 |
| MS.gene053322 | MS.gene36341 | 0.892314 | 1.78E-74 | -1.69E-46 |
| MS.gene053384 | MS.gene36341 | 0.806467 | 8.11E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene36341 | 0.855211 | 7.35E-62 | -1.69E-46 |
| MS.gene053449 | MS.gene36341 | 0.812544 | 4.02E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene36341 | 0.897112 | 1.93E-76 | -1.69E-46 |
| MS.gene053632 | MS.gene36341 | 0.856065 | 4.14E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene36341 | 0.830476 | 2.87E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene36341 | 0.833175 | 6.20E-56 | -1.69E-46 |
| MS.gene053915 | MS.gene36341 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene36341 | 0.83767 | 4.53E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene36341 | 0.871244 | 7.92E-67 | -1.69E-46 |
| MS.gene054408 | MS.gene36341 | 0.838918 | 2.16E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene36341 | 0.851682 | 7.57E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene36341 | 0.869815 | 2.33E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene36341 | 0.912985 | 1.04E-83 | -1.69E-46 |
| MS.gene054802 | MS.gene36341 | 0.863445 | 2.48E-64 | -1.69E-46 |
| MS.gene054803 | MS.gene36341 | 0.859928 | 2.94E-63 | -1.69E-46 |
| MS.gene054804 | MS.gene36341 | 0.864877 | 8.86E-65 | -1.69E-46 |
| MS.gene054927 | MS.gene36341 | 0.829254 | 5.70E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene36341 | 0.869644 | 2.65E-66 | -1.69E-46 |
| MS.gene05505 | MS.gene36341 | 0.881934 | 1.59E-70 | -1.69E-46 |
| MS.gene055154 | MS.gene36341 | -0.822021 | 2.96E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene36341 | 0.859788 | 3.25E-63 | -1.69E-46 |
| MS.gene055212 | MS.gene36341 | 0.846234 | 2.47E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene36341 | 0.843991 | 9.97E-59 | -1.69E-46 |
| MS.gene055254 | MS.gene36341 | 0.810188 | 1.31E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene36341 | 0.818285 | 2.12E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene36341 | 0.846039 | 2.79E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene36341 | 0.89097 | 6.08E-74 | -1.69E-46 |
| MS.gene055397 | MS.gene36341 | 0.852352 | 4.88E-61 | -1.69E-46 |
| MS.gene055412 | MS.gene36341 | 0.822686 | 2.07E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene36341 | 0.897858 | 9.35E-77 | -1.69E-46 |
| MS.gene055502 | MS.gene36341 | 0.870336 | 1.58E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene36341 | 0.860251 | 2.35E-63 | -1.69E-46 |
| MS.gene055636 | MS.gene36341 | 0.858586 | 7.44E-63 | -1.69E-46 |
| MS.gene055638 | MS.gene36341 | 0.839171 | 1.86E-57 | -1.69E-46 |
| MS.gene055647 | MS.gene36341 | 0.897261 | 1.67E-76 | -1.69E-46 |
| MS.gene055722 | MS.gene36341 | 0.89871 | 4.06E-77 | -1.69E-46 |
| MS.gene055750 | MS.gene36341 | 0.805224 | 1.48E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene36341 | 0.903672 | 2.72E-79 | -1.69E-46 |
| MS.gene055941 | MS.gene36341 | 0.8545 | 1.18E-61 | -1.69E-46 |
| MS.gene055956 | MS.gene36341 | -0.822127 | 2.80E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene36341 | 0.883623 | 3.84E-71 | -1.69E-46 |
| MS.gene056374 | MS.gene36341 | 0.902995 | 5.48E-79 | -1.69E-46 |
| MS.gene056409 | MS.gene36341 | 0.816332 | 5.84E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene36341 | 0.838405 | 2.93E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene36341 | 0.805898 | 1.07E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene36341 | 0.829095 | 6.24E-55 | -1.69E-46 |
| MS.gene056452 | MS.gene36341 | 0.810633 | 1.05E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene36341 | 0.806092 | 9.73E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene36341 | 0.832062 | 1.17E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene36341 | 0.838932 | 2.14E-57 | -1.69E-46 |
| MS.gene056511 | MS.gene36341 | 0.835545 | 1.58E-56 | -1.69E-46 |
| MS.gene056549 | MS.gene36341 | 0.825109 | 5.61E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene36341 | 0.809925 | 1.49E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene36341 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene056611 | MS.gene36341 | 0.804955 | 1.69E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene36341 | 0.900808 | 5.06E-78 | -1.69E-46 |
| MS.gene05666 | MS.gene36341 | 0.808542 | 2.94E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene36341 | 0.840431 | 8.73E-58 | -1.69E-46 |
| MS.gene056796 | MS.gene36341 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene36341 | 0.832147 | 1.12E-55 | -1.69E-46 |
| MS.gene056898 | MS.gene36341 | 0.802323 | 5.92E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene36341 | 0.803543 | 3.32E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene36341 | 0.883778 | 3.36E-71 | -1.69E-46 |
| MS.gene057076 | MS.gene36341 | 0.835013 | 2.15E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene36341 | 0.802339 | 5.88E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene36341 | 0.890596 | 8.54E-74 | -1.69E-46 |
| MS.gene057146 | MS.gene36341 | 0.852117 | 5.70E-61 | -1.69E-46 |
| MS.gene057285 | MS.gene36341 | 0.804494 | 2.10E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene36341 | 0.920384 | 1.37E-87 | -1.69E-46 |
| MS.gene05735 | MS.gene36341 | 0.802428 | 5.64E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene36341 | 0.935773 | 5.00E-97 | -1.69E-46 |
| MS.gene057658 | MS.gene36341 | 0.819656 | 1.04E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene36341 | 0.831936 | 1.26E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene36341 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene36341 | 0.835233 | 1.89E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene36341 | 0.837011 | 6.69E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene36341 | 0.856756 | 2.59E-62 | -1.69E-46 |
| MS.gene058130 | MS.gene36341 | 0.829236 | 5.76E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene36341 | 0.811225 | 7.79E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene36341 | 0.892668 | 1.28E-74 | -1.69E-46 |
| MS.gene058338 | MS.gene36341 | 0.831944 | 1.25E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene36341 | 0.84724 | 1.31E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene36341 | 0.891774 | 2.92E-74 | -1.69E-46 |
| MS.gene058544 | MS.gene36341 | 0.878279 | 3.19E-69 | -1.69E-46 |
| MS.gene058660 | MS.gene36341 | 0.836096 | 1.14E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene36341 | 0.859693 | 3.47E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene36341 | 0.880172 | 6.83E-70 | -1.69E-46 |
| MS.gene058838 | MS.gene36341 | 0.83639 | 9.63E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene36341 | 0.879081 | 1.67E-69 | -1.69E-46 |
| MS.gene058840 | MS.gene36341 | -0.816109 | 6.55E-52 | -1.69E-46 |
| MS.gene058903 | MS.gene36341 | 0.820701 | 5.97E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene36341 | 0.880301 | 6.14E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene36341 | 0.855093 | 7.95E-62 | -1.69E-46 |
| MS.gene059029 | MS.gene36341 | 0.870634 | 1.26E-66 | -1.69E-46 |
| MS.gene05913 | MS.gene36341 | 0.813594 | 2.37E-51 | -1.69E-46 |
| MS.gene059305 | MS.gene36341 | 0.822275 | 2.59E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene36341 | 0.868919 | 4.56E-66 | -1.69E-46 |
| MS.gene059367 | MS.gene36341 | 0.807299 | 5.41E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene36341 | 0.890974 | 6.06E-74 | -1.69E-46 |
| MS.gene059676 | MS.gene36341 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene36341 | 0.887195 | 1.77E-72 | -1.69E-46 |
| MS.gene059688 | MS.gene36341 | 0.828976 | 6.66E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene36341 | 0.805269 | 1.45E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene36341 | 0.810203 | 1.30E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene36341 | 0.837803 | 4.19E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene36341 | 0.899197 | 2.52E-77 | -1.69E-46 |
| MS.gene059756 | MS.gene36341 | 0.838084 | 3.55E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene36341 | 0.829954 | 3.86E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene36341 | 0.841422 | 4.80E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene36341 | 0.875401 | 3.17E-68 | -1.69E-46 |
| MS.gene059960 | MS.gene36341 | 0.88129 | 2.71E-70 | -1.69E-46 |
| MS.gene060193 | MS.gene36341 | 0.838203 | 3.31E-57 | -1.69E-46 |
| MS.gene060356 | MS.gene36341 | 0.815833 | 7.55E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene36341 | 0.820791 | 5.69E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene36341 | 0.871943 | 4.65E-67 | -1.69E-46 |
| MS.gene060703 | MS.gene36341 | 0.815081 | 1.11E-51 | -1.69E-46 |
| MS.gene060727 | MS.gene36341 | 0.800442 | 1.44E-48 | -1.69E-46 |
| MS.gene060728 | MS.gene36341 | 0.820486 | 6.69E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene36341 | 0.836524 | 8.90E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene36341 | 0.858054 | 1.07E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene36341 | 0.90225 | 1.17E-78 | -1.69E-46 |
| MS.gene060818 | MS.gene36341 | 0.853304 | 2.61E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene36341 | 0.853336 | 2.56E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene36341 | 0.850984 | 1.19E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene36341 | 0.889811 | 1.73E-73 | -1.69E-46 |
| MS.gene060982 | MS.gene36341 | 0.814436 | 1.54E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene36341 | 0.845171 | 4.80E-59 | -1.69E-46 |
| MS.gene061134 | MS.gene36341 | 0.871192 | 8.24E-67 | -1.69E-46 |
| MS.gene061150 | MS.gene36341 | 0.886156 | 4.37E-72 | -1.69E-46 |
| MS.gene061171 | MS.gene36341 | 0.846715 | 1.83E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene36341 | 0.906042 | 2.26E-80 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36341.t1 | MTR_2g101380 | 97.906 | 191 | 4 | 0 | 1 | 191 | 1 | 191 | 1.10e-139 | 387 |
| MS.gene36341.t1 | MTR_1g011510 | 53.846 | 104 | 46 | 2 | 72 | 174 | 60 | 162 | 1.95e-24 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36341.t1 | AT3G16250 | 64.641 | 181 | 50 | 5 | 18 | 185 | 20 | 199 | 2.73e-77 | 230 |
| MS.gene36341.t1 | AT4G32590 | 53.846 | 104 | 46 | 2 | 72 | 174 | 70 | 172 | 1.57e-25 | 97.4 |
| MS.gene36341.t1 | AT4G32590 | 53.763 | 93 | 41 | 2 | 72 | 163 | 70 | 161 | 3.36e-19 | 80.9 |
Find 43 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCTGAGTCCTTCCTTTC+AGG | 0.071476 | 2.2:-2165392 | None:intergenic |
| AGTGCCAACTGCTCTAATTT+TGG | 0.198239 | 2.2:-2165366 | None:intergenic |
| CATGCTAATCTCCAATTCTT+TGG | 0.246574 | 2.2:-2166194 | None:intergenic |
| GAGAGAGATGTGAATGCATT+AGG | 0.312328 | 2.2:-2165293 | None:intergenic |
| AGAGAGATGTGAATGCATTA+GGG | 0.331294 | 2.2:-2165292 | None:intergenic |
| TCTCTGAGTCCTTCCTTTCA+GGG | 0.356821 | 2.2:-2165391 | None:intergenic |
| TCTAATGACCCTCCCTCTAT+AGG | 0.376560 | 2.2:+2165425 | MS.gene36341:CDS |
| GACAAATGCAAAGCCTATAG+AGG | 0.388630 | 2.2:-2165438 | None:intergenic |
| GATTCTAATATTGAACTCTA+TGG | 0.391241 | 2.2:+2165695 | MS.gene36341:CDS |
| TAGGGGTTAGTTTGAGTTGG+AGG | 0.393377 | 2.2:-2165274 | None:intergenic |
| CTTGCAAAGAGTGTTGTGTT+TGG | 0.404915 | 2.2:-2165341 | None:intergenic |
| CATTCATGTCCTTTCCACTC+TGG | 0.430702 | 2.2:-2166396 | None:intergenic |
| TGCACATCTGGTGTTCCATC+TGG | 0.437999 | 2.2:-2165626 | None:intergenic |
| CATTAGGGGTTAGTTTGAGT+TGG | 0.450485 | 2.2:-2165277 | None:intergenic |
| AATTGCTATTAGGTTCTTGA+AGG | 0.451453 | 2.2:+2165958 | MS.gene36341:intron |
| GCTGTACGATAATGCACATC+TGG | 0.480063 | 2.2:-2165638 | None:intergenic |
| GTGGGTGAAGCAGATTCTAC+AGG | 0.486617 | 2.2:+2166227 | MS.gene36341:CDS |
| CTATTAGGTTCTTGAAGGCA+AGG | 0.503895 | 2.2:+2165963 | MS.gene36341:intron |
| GAAGCTTAGGAACATAATGT+TGG | 0.511451 | 2.2:+2165673 | MS.gene36341:CDS |
| CTTGTGGTGGACAGAAGCTT+AGG | 0.512735 | 2.2:+2165660 | MS.gene36341:CDS |
| ACATGAATGGAAATATGAAA+AGG | 0.521149 | 2.2:+2166410 | MS.gene36341:CDS |
| CAGAGTGGAAAGGACATGAA+TGG | 0.529406 | 2.2:+2166397 | MS.gene36341:CDS |
| AGAACCAAAATTAGAGCAGT+TGG | 0.536986 | 2.2:+2165362 | MS.gene36341:CDS |
| TGGCACTGTCCCTGAAAGGA+AGG | 0.557748 | 2.2:+2165382 | MS.gene36341:CDS |
| TGGAACTTGTGCTACATGTA+TGG | 0.561485 | 2.2:+2165838 | MS.gene36341:CDS |
| TAGTCTGTGTTGCTACCAGA+TGG | 0.569681 | 2.2:+2165611 | MS.gene36341:intron |
| TGGGTGAAGCAGATTCTACA+GGG | 0.575014 | 2.2:+2166228 | MS.gene36341:CDS |
| TCTTTCTCTTTGTCAGTGCG+AGG | 0.589508 | 2.2:-2165997 | None:intergenic |
| CAGTTGGCACTGTCCCTGAA+AGG | 0.596043 | 2.2:+2165378 | MS.gene36341:CDS |
| TTAGCATGTCAAACAACTGT+GGG | 0.604116 | 2.2:+2166209 | MS.gene36341:CDS |
| TTGTGCTACATGTATGGTAG+AGG | 0.614537 | 2.2:+2165844 | MS.gene36341:CDS |
| ACAAATGCAAAGCCTATAGA+GGG | 0.622154 | 2.2:-2165437 | None:intergenic |
| GTGCATTATCGTACAGCTTG+TGG | 0.644594 | 2.2:+2165644 | MS.gene36341:CDS |
| CAACAATTACCAGAGTGGAA+AGG | 0.648231 | 2.2:+2166387 | MS.gene36341:CDS |
| TGAAGCAGATTCTACAGGGG+TGG | 0.651914 | 2.2:+2166232 | MS.gene36341:CDS |
| AATGCAAAGCCTATAGAGGG+AGG | 0.652647 | 2.2:-2165434 | None:intergenic |
| ATGCAAAGCCTATAGAGGGA+GGG | 0.653148 | 2.2:-2165433 | None:intergenic |
| ATTAGCATGTCAAACAACTG+TGG | 0.658456 | 2.2:+2166208 | MS.gene36341:CDS |
| GAGAGATGTGAATGCATTAG+GGG | 0.663309 | 2.2:-2165291 | None:intergenic |
| TGATTCAACAATTACCAGAG+TGG | 0.670303 | 2.2:+2166382 | MS.gene36341:CDS |
| GAGTCAGCAGACTCTTTGTG+AGG | 0.678932 | 2.2:+2166441 | MS.gene36341:CDS |
| CATTATCGTACAGCTTGTGG+TGG | 0.680953 | 2.2:+2165647 | MS.gene36341:CDS |
| GGGTGAAGCAGATTCTACAG+GGG | 0.770570 | 2.2:+2166229 | MS.gene36341:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTAATTGCTATT+AGG | + | chr2.2:2165948-2165967 | MS.gene36341:intron | 10.0% |
| !!! | TTTATTTTTAAGCAATAATT+GGG | + | chr2.2:2165756-2165775 | MS.gene36341:intron | 10.0% |
| !!! | TTTTATTTTTAAGCAATAAT+TGG | + | chr2.2:2165755-2165774 | MS.gene36341:intron | 10.0% |
| !! | CAGATTAGAAATTAATAAAA+TGG | + | chr2.2:2166285-2166304 | MS.gene36341:intron | 15.0% |
| !! | ATTTATGTTGAGCAATATAT+TGG | + | chr2.2:2166330-2166349 | MS.gene36341:intron | 20.0% |
| !!! | AATTAATGTCTAATGTTTTG+TGG | + | chr2.2:2165586-2165605 | MS.gene36341:intron | 20.0% |
| !!! | AGCAAAAATACACATTTTAT+TGG | + | chr2.2:2165896-2165915 | MS.gene36341:intron | 20.0% |
| !!! | GCAAAAATACACATTTTATT+GGG | + | chr2.2:2165897-2165916 | MS.gene36341:intron | 20.0% |
| !!! | GTTAGTACTACTAATTTTTT+GGG | + | chr2.2:2166254-2166273 | MS.gene36341:intron | 20.0% |
| !!! | TTTTATAGAAACCAAAGAAT+TGG | + | chr2.2:2166183-2166202 | MS.gene36341:intron | 20.0% |
| ! | AAGAGAAAGAAAAACTTAAG+AGG | + | chr2.2:2166010-2166029 | MS.gene36341:CDS | 25.0% |
| ! | AATTTAACAAAATTCTACCC+TGG | - | chr2.2:2165808-2165827 | None:intergenic | 25.0% |
| ! | ACATGAATGGAAATATGAAA+AGG | + | chr2.2:2166410-2166429 | MS.gene36341:CDS | 25.0% |
| ! | AGAGAAAGAAAAACTTAAGA+GGG | + | chr2.2:2166011-2166030 | MS.gene36341:CDS | 25.0% |
| ! | GATTCTAATATTGAACTCTA+TGG | + | chr2.2:2165695-2165714 | MS.gene36341:CDS | 25.0% |
| ! | GTTAGTGAGATAATTACATA+AGG | - | chr2.2:2165722-2165741 | None:intergenic | 25.0% |
| !! | AATTTTGTTAAATTGTGGAG+GGG | + | chr2.2:2165814-2165833 | MS.gene36341:CDS | 25.0% |
| !! | AGAATTTTGTTAAATTGTGG+AGG | + | chr2.2:2165812-2165831 | MS.gene36341:CDS | 25.0% |
| !! | GAATTTTGTTAAATTGTGGA+GGG | + | chr2.2:2165813-2165832 | MS.gene36341:CDS | 25.0% |
| !! | GGTAGAATTTTGTTAAATTG+TGG | + | chr2.2:2165809-2165828 | MS.gene36341:CDS | 25.0% |
| !!! | ATTTTATTGTTGCTTTTTCC+AGG | + | chr2.2:2165787-2165806 | MS.gene36341:intron | 25.0% |
| !!! | GGTTAGTACTACTAATTTTT+TGG | + | chr2.2:2166253-2166272 | MS.gene36341:intron | 25.0% |
| !!! | TTTTATTGTTGCTTTTTCCA+GGG | + | chr2.2:2165788-2165807 | MS.gene36341:intron | 25.0% |
| ! | AATTGCTATTAGGTTCTTGA+AGG | + | chr2.2:2165958-2165977 | MS.gene36341:intron | 30.0% |
| ! | ATTTTCATTCCATGTGATGT+AGG | + | chr2.2:2166356-2166375 | MS.gene36341:intron | 30.0% |
| ! | ATTTTGTTAAATTGTGGAGG+GGG | + | chr2.2:2165815-2165834 | MS.gene36341:CDS | 30.0% |
| !!! | TGGTCTGAATTTTTTATGTG+AGG | - | chr2.2:2165324-2165343 | None:intergenic | 30.0% |
| ACAAATGCAAAGCCTATAGA+GGG | - | chr2.2:2165440-2165459 | None:intergenic | 35.0% | |
| AGAACCAAAATTAGAGCAGT+TGG | + | chr2.2:2165362-2165381 | MS.gene36341:CDS | 35.0% | |
| AGAGAGATGTGAATGCATTA+GGG | - | chr2.2:2165295-2165314 | None:intergenic | 35.0% | |
| ATGTGAAATGTGAACTCTTG+TGG | + | chr2.2:2166126-2166145 | MS.gene36341:intron | 35.0% | |
| ATTAGCATGTCAAACAACTG+TGG | + | chr2.2:2166208-2166227 | MS.gene36341:CDS | 35.0% | |
| CATGCTAATCTCCAATTCTT+TGG | - | chr2.2:2166197-2166216 | None:intergenic | 35.0% | |
| GAAGCTTAGGAACATAATGT+TGG | + | chr2.2:2165673-2165692 | MS.gene36341:CDS | 35.0% | |
| TGATTCAACAATTACCAGAG+TGG | + | chr2.2:2166382-2166401 | MS.gene36341:CDS | 35.0% | |
| TTAGCATGTCAAACAACTGT+GGG | + | chr2.2:2166209-2166228 | MS.gene36341:CDS | 35.0% | |
| CAACAATTACCAGAGTGGAA+AGG | + | chr2.2:2166387-2166406 | MS.gene36341:CDS | 40.0% | |
| CTATTAGGTTCTTGAAGGCA+AGG | + | chr2.2:2165963-2165982 | MS.gene36341:intron | 40.0% | |
| GAATCACAACCTACATCACA+TGG | - | chr2.2:2166368-2166387 | None:intergenic | 40.0% | |
| GACAAATGCAAAGCCTATAG+AGG | - | chr2.2:2165441-2165460 | None:intergenic | 40.0% | |
| GAGAGAGATGTGAATGCATT+AGG | - | chr2.2:2165296-2165315 | None:intergenic | 40.0% | |
| GAGAGATGTGAATGCATTAG+GGG | - | chr2.2:2165294-2165313 | None:intergenic | 40.0% | |
| TGGAACTTGTGCTACATGTA+TGG | + | chr2.2:2165838-2165857 | MS.gene36341:CDS | 40.0% | |
| TTGTGCTACATGTATGGTAG+AGG | + | chr2.2:2165844-2165863 | MS.gene36341:CDS | 40.0% | |
| ! | AGTGCCAACTGCTCTAATTT+TGG | - | chr2.2:2165369-2165388 | None:intergenic | 40.0% |
| !! | CATTAGGGGTTAGTTTGAGT+TGG | - | chr2.2:2165280-2165299 | None:intergenic | 40.0% |
| !! | CTTGCAAAGAGTGTTGTGTT+TGG | - | chr2.2:2165344-2165363 | None:intergenic | 40.0% |
| AATGCAAAGCCTATAGAGGG+AGG | - | chr2.2:2165437-2165456 | None:intergenic | 45.0% | |
| ATGCAAAGCCTATAGAGGGA+GGG | - | chr2.2:2165436-2165455 | None:intergenic | 45.0% | |
| CAGAGTGGAAAGGACATGAA+TGG | + | chr2.2:2166397-2166416 | MS.gene36341:CDS | 45.0% | |
| CATTATCGTACAGCTTGTGG+TGG | + | chr2.2:2165647-2165666 | MS.gene36341:CDS | 45.0% | |
| CATTCATGTCCTTTCCACTC+TGG | - | chr2.2:2166399-2166418 | None:intergenic | 45.0% | |
| GCTGTACGATAATGCACATC+TGG | - | chr2.2:2165641-2165660 | None:intergenic | 45.0% | |
| GTGCATTATCGTACAGCTTG+TGG | + | chr2.2:2165644-2165663 | MS.gene36341:CDS | 45.0% | |
| TCTAATGACCCTCCCTCTAT+AGG | + | chr2.2:2165425-2165444 | MS.gene36341:CDS | 45.0% | |
| TCTCTGAGTCCTTCCTTTCA+GGG | - | chr2.2:2165394-2165413 | None:intergenic | 45.0% | |
| TCTTTCTCTTTGTCAGTGCG+AGG | - | chr2.2:2166000-2166019 | None:intergenic | 45.0% | |
| TGGGTGAAGCAGATTCTACA+GGG | + | chr2.2:2166228-2166247 | MS.gene36341:CDS | 45.0% | |
| TTGTTAAATTGTGGAGGGGG+TGG | + | chr2.2:2165818-2165837 | MS.gene36341:CDS | 45.0% | |
| ! | TAGTCTGTGTTGCTACCAGA+TGG | + | chr2.2:2165611-2165630 | MS.gene36341:intron | 45.0% |
| !! | TAGGGGTTAGTTTGAGTTGG+AGG | - | chr2.2:2165277-2165296 | None:intergenic | 45.0% |
| GGGTGAAGCAGATTCTACAG+GGG | + | chr2.2:2166229-2166248 | MS.gene36341:CDS | 50.0% | |
| GTCTCTGAGTCCTTCCTTTC+AGG | - | chr2.2:2165395-2165414 | None:intergenic | 50.0% | |
| GTGGGTGAAGCAGATTCTAC+AGG | + | chr2.2:2166227-2166246 | MS.gene36341:CDS | 50.0% | |
| TGAAGCAGATTCTACAGGGG+TGG | + | chr2.2:2166232-2166251 | MS.gene36341:CDS | 50.0% | |
| TGCACATCTGGTGTTCCATC+TGG | - | chr2.2:2165629-2165648 | None:intergenic | 50.0% | |
| !! | CTTGTGGTGGACAGAAGCTT+AGG | + | chr2.2:2165660-2165679 | MS.gene36341:CDS | 50.0% |
| CAGTTGGCACTGTCCCTGAA+AGG | + | chr2.2:2165378-2165397 | MS.gene36341:CDS | 55.0% | |
| TGGCACTGTCCCTGAAAGGA+AGG | + | chr2.2:2165382-2165401 | MS.gene36341:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 2165266 | 2166461 | 2165266 | ID=MS.gene36341 |
| chr2.2 | mRNA | 2165266 | 2166461 | 2165266 | ID=MS.gene36341.t1;Parent=MS.gene36341 |
| chr2.2 | exon | 2165266 | 2165463 | 2165266 | ID=MS.gene36341.t1.exon1;Parent=MS.gene36341.t1 |
| chr2.2 | CDS | 2165266 | 2165463 | 2165266 | ID=cds.MS.gene36341.t1;Parent=MS.gene36341.t1 |
| chr2.2 | exon | 2165614 | 2165724 | 2165614 | ID=MS.gene36341.t1.exon2;Parent=MS.gene36341.t1 |
| chr2.2 | CDS | 2165614 | 2165724 | 2165614 | ID=cds.MS.gene36341.t1;Parent=MS.gene36341.t1 |
| chr2.2 | exon | 2165809 | 2165865 | 2165809 | ID=MS.gene36341.t1.exon3;Parent=MS.gene36341.t1 |
| chr2.2 | CDS | 2165809 | 2165865 | 2165809 | ID=cds.MS.gene36341.t1;Parent=MS.gene36341.t1 |
| chr2.2 | exon | 2165970 | 2166032 | 2165970 | ID=MS.gene36341.t1.exon4;Parent=MS.gene36341.t1 |
| chr2.2 | CDS | 2165970 | 2166032 | 2165970 | ID=cds.MS.gene36341.t1;Parent=MS.gene36341.t1 |
| chr2.2 | exon | 2166191 | 2166253 | 2166191 | ID=MS.gene36341.t1.exon5;Parent=MS.gene36341.t1 |
| chr2.2 | CDS | 2166191 | 2166253 | 2166191 | ID=cds.MS.gene36341.t1;Parent=MS.gene36341.t1 |
| chr2.2 | exon | 2166378 | 2166461 | 2166378 | ID=MS.gene36341.t1.exon6;Parent=MS.gene36341.t1 |
| chr2.2 | CDS | 2166378 | 2166461 | 2166378 | ID=cds.MS.gene36341.t1;Parent=MS.gene36341.t1 |
| Gene Sequence |
| Protein sequence |
