Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43940.t1 | AFK41919.1 | 91.3 | 311 | 20 | 3 | 1 | 310 | 1 | 305 | 5.80E-120 | 440.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43940.t1 | Q8GWQ2 | 46.6 | 320 | 122 | 8 | 1 | 310 | 1 | 281 | 1.8e-53 | 211.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43940.t1 | G7I674 | 92.3 | 311 | 17 | 3 | 1 | 310 | 1 | 305 | 4.2e-120 | 440.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene43940 | -0.823689 | 1.21E-53 | -1.69E-46 |
MS.gene049171 | MS.gene43940 | -0.869551 | 2.85E-66 | -1.69E-46 |
MS.gene049217 | MS.gene43940 | -0.8508 | 1.34E-60 | -1.69E-46 |
MS.gene049222 | MS.gene43940 | -0.876358 | 1.49E-68 | -1.69E-46 |
MS.gene049232 | MS.gene43940 | -0.825436 | 4.69E-54 | -1.69E-46 |
MS.gene049281 | MS.gene43940 | 0.826573 | 2.52E-54 | -1.69E-46 |
MS.gene049285 | MS.gene43940 | -0.866064 | 3.75E-65 | -1.69E-46 |
MS.gene049320 | MS.gene43940 | -0.85717 | 1.96E-62 | -1.69E-46 |
MS.gene049609 | MS.gene43940 | -0.852169 | 5.51E-61 | -1.69E-46 |
MS.gene049611 | MS.gene43940 | 0.831134 | 1.98E-55 | -1.69E-46 |
MS.gene049633 | MS.gene43940 | -0.831441 | 1.67E-55 | -1.69E-46 |
MS.gene049634 | MS.gene43940 | 0.800946 | 1.14E-48 | -1.69E-46 |
MS.gene049805 | MS.gene43940 | -0.838233 | 3.25E-57 | -1.69E-46 |
MS.gene05010 | MS.gene43940 | -0.831538 | 1.58E-55 | -1.69E-46 |
MS.gene050163 | MS.gene43940 | -0.835518 | 1.60E-56 | -1.69E-46 |
MS.gene050165 | MS.gene43940 | -0.829138 | 6.09E-55 | -1.69E-46 |
MS.gene050170 | MS.gene43940 | -0.843599 | 1.27E-58 | -1.69E-46 |
MS.gene050216 | MS.gene43940 | -0.80592 | 1.06E-49 | -1.69E-46 |
MS.gene050323 | MS.gene43940 | -0.858962 | 5.74E-63 | -1.69E-46 |
MS.gene050333 | MS.gene43940 | -0.831274 | 1.83E-55 | -1.69E-46 |
MS.gene050380 | MS.gene43940 | 0.82362 | 1.26E-53 | -1.69E-46 |
MS.gene050381 | MS.gene43940 | 0.850274 | 1.89E-60 | -1.69E-46 |
MS.gene050444 | MS.gene43940 | -0.808755 | 2.65E-50 | -1.69E-46 |
MS.gene050496 | MS.gene43940 | -0.845992 | 2.87E-59 | -1.69E-46 |
MS.gene050504 | MS.gene43940 | -0.863469 | 2.43E-64 | -1.69E-46 |
MS.gene050518 | MS.gene43940 | -0.825327 | 4.98E-54 | -1.69E-46 |
MS.gene050538 | MS.gene43940 | -0.844313 | 8.17E-59 | -1.69E-46 |
MS.gene050577 | MS.gene43940 | -0.846775 | 1.76E-59 | -1.69E-46 |
MS.gene050593 | MS.gene43940 | -0.819241 | 1.29E-52 | -1.69E-46 |
MS.gene050612 | MS.gene43940 | -0.861396 | 1.06E-63 | -1.69E-46 |
MS.gene050647 | MS.gene43940 | 0.807438 | 5.05E-50 | -1.69E-46 |
MS.gene050662 | MS.gene43940 | -0.801327 | 9.49E-49 | -1.69E-46 |
MS.gene050675 | MS.gene43940 | -0.850373 | 1.77E-60 | -1.69E-46 |
MS.gene050699 | MS.gene43940 | -0.862268 | 5.72E-64 | -1.69E-46 |
MS.gene050747 | MS.gene43940 | -0.864618 | 1.07E-64 | -1.69E-46 |
MS.gene050772 | MS.gene43940 | -0.867603 | 1.21E-65 | -1.69E-46 |
MS.gene050800 | MS.gene43940 | 0.807557 | 4.77E-50 | -1.69E-46 |
MS.gene050809 | MS.gene43940 | 0.818649 | 1.76E-52 | -1.69E-46 |
MS.gene05080 | MS.gene43940 | -0.841044 | 6.03E-58 | -1.69E-46 |
MS.gene05081 | MS.gene43940 | -0.822043 | 2.93E-53 | -1.69E-46 |
MS.gene050868 | MS.gene43940 | -0.851858 | 6.75E-61 | -1.69E-46 |
MS.gene050871 | MS.gene43940 | -0.850086 | 2.13E-60 | -1.69E-46 |
MS.gene050883 | MS.gene43940 | 0.815012 | 1.15E-51 | -1.69E-46 |
MS.gene050950 | MS.gene43940 | -0.856988 | 2.22E-62 | -1.69E-46 |
MS.gene050986 | MS.gene43940 | -0.831687 | 1.45E-55 | -1.69E-46 |
MS.gene05100 | MS.gene43940 | -0.82207 | 2.88E-53 | -1.69E-46 |
MS.gene051044 | MS.gene43940 | 0.806521 | 7.90E-50 | -1.69E-46 |
MS.gene05104 | MS.gene43940 | 0.840363 | 9.10E-58 | -1.69E-46 |
MS.gene051113 | MS.gene43940 | 0.813512 | 2.47E-51 | -1.69E-46 |
MS.gene051127 | MS.gene43940 | 0.809507 | 1.83E-50 | -1.69E-46 |
MS.gene051138 | MS.gene43940 | 0.802426 | 5.64E-49 | -1.69E-46 |
MS.gene051167 | MS.gene43940 | 0.83282 | 7.60E-56 | -1.69E-46 |
MS.gene051268 | MS.gene43940 | -0.80628 | 8.88E-50 | -1.69E-46 |
MS.gene051317 | MS.gene43940 | -0.826414 | 2.75E-54 | -1.69E-46 |
MS.gene051364 | MS.gene43940 | 0.834331 | 3.19E-56 | -1.69E-46 |
MS.gene051366 | MS.gene43940 | 0.826136 | 3.20E-54 | -1.69E-46 |
MS.gene051387 | MS.gene43940 | -0.810894 | 9.18E-51 | -1.69E-46 |
MS.gene051551 | MS.gene43940 | -0.817615 | 3.01E-52 | -1.69E-46 |
MS.gene051632 | MS.gene43940 | 0.830941 | 2.21E-55 | -1.69E-46 |
MS.gene051651 | MS.gene43940 | 0.807625 | 4.61E-50 | -1.69E-46 |
MS.gene051666 | MS.gene43940 | -0.824312 | 8.64E-54 | -1.69E-46 |
MS.gene051694 | MS.gene43940 | -0.833883 | 4.13E-56 | -1.69E-46 |
MS.gene051810 | MS.gene43940 | -0.823975 | 1.04E-53 | -1.69E-46 |
MS.gene051838 | MS.gene43940 | -0.852061 | 5.91E-61 | -1.69E-46 |
MS.gene051858 | MS.gene43940 | -0.825835 | 3.77E-54 | -1.69E-46 |
MS.gene051946 | MS.gene43940 | 0.800247 | 1.58E-48 | -1.69E-46 |
MS.gene051949 | MS.gene43940 | -0.802284 | 6.04E-49 | -1.69E-46 |
MS.gene052164 | MS.gene43940 | -0.850879 | 1.28E-60 | -1.69E-46 |
MS.gene05234 | MS.gene43940 | 0.825098 | 5.64E-54 | -1.69E-46 |
MS.gene05240 | MS.gene43940 | 0.826349 | 2.85E-54 | -1.69E-46 |
MS.gene052482 | MS.gene43940 | -0.836642 | 8.30E-57 | -1.69E-46 |
MS.gene052486 | MS.gene43940 | -0.843312 | 1.51E-58 | -1.69E-46 |
MS.gene052501 | MS.gene43940 | -0.807938 | 3.96E-50 | -1.69E-46 |
MS.gene052503 | MS.gene43940 | -0.851477 | 8.65E-61 | -1.69E-46 |
MS.gene052506 | MS.gene43940 | -0.838707 | 2.45E-57 | -1.69E-46 |
MS.gene052615 | MS.gene43940 | -0.857669 | 1.39E-62 | -1.69E-46 |
MS.gene052822 | MS.gene43940 | -0.835373 | 1.74E-56 | -1.69E-46 |
MS.gene052823 | MS.gene43940 | -0.851582 | 8.08E-61 | -1.69E-46 |
MS.gene052825 | MS.gene43940 | -0.852266 | 5.17E-61 | -1.69E-46 |
MS.gene052870 | MS.gene43940 | -0.802013 | 6.86E-49 | -1.69E-46 |
MS.gene052872 | MS.gene43940 | -0.819576 | 1.08E-52 | -1.69E-46 |
MS.gene052916 | MS.gene43940 | -0.830641 | 2.62E-55 | -1.69E-46 |
MS.gene052966 | MS.gene43940 | -0.825581 | 4.34E-54 | -1.69E-46 |
MS.gene053117 | MS.gene43940 | -0.80569 | 1.18E-49 | -1.69E-46 |
MS.gene053203 | MS.gene43940 | -0.87163 | 5.90E-67 | -1.69E-46 |
MS.gene053207 | MS.gene43940 | -0.822205 | 2.68E-53 | -1.69E-46 |
MS.gene053213 | MS.gene43940 | -0.858809 | 6.38E-63 | -1.69E-46 |
MS.gene053286 | MS.gene43940 | -0.854915 | 8.96E-62 | -1.69E-46 |
MS.gene053420 | MS.gene43940 | 0.858402 | 8.44E-63 | -1.69E-46 |
MS.gene053421 | MS.gene43940 | 0.854729 | 1.01E-61 | -1.69E-46 |
MS.gene053436 | MS.gene43940 | -0.863901 | 1.79E-64 | -1.69E-46 |
MS.gene053479 | MS.gene43940 | -0.841362 | 4.98E-58 | -1.69E-46 |
MS.gene053480 | MS.gene43940 | -0.81797 | 2.50E-52 | -1.69E-46 |
MS.gene053574 | MS.gene43940 | -0.850648 | 1.48E-60 | -1.69E-46 |
MS.gene053579 | MS.gene43940 | -0.806285 | 8.86E-50 | -1.69E-46 |
MS.gene053626 | MS.gene43940 | -0.807974 | 3.89E-50 | -1.69E-46 |
MS.gene053632 | MS.gene43940 | -0.854364 | 1.29E-61 | -1.69E-46 |
MS.gene053776 | MS.gene43940 | 0.807121 | 5.90E-50 | -1.69E-46 |
MS.gene053824 | MS.gene43940 | -0.857505 | 1.56E-62 | -1.69E-46 |
MS.gene053916 | MS.gene43940 | -0.832882 | 7.34E-56 | -1.69E-46 |
MS.gene054003 | MS.gene43940 | -0.806578 | 7.69E-50 | -1.69E-46 |
MS.gene054408 | MS.gene43940 | -0.822675 | 2.09E-53 | -1.69E-46 |
MS.gene054595 | MS.gene43940 | -0.860845 | 1.55E-63 | -1.69E-46 |
MS.gene054600 | MS.gene43940 | -0.836714 | 7.96E-57 | -1.69E-46 |
MS.gene054642 | MS.gene43940 | -0.8636 | 2.22E-64 | -1.69E-46 |
MS.gene054706 | MS.gene43940 | 0.882909 | 7.01E-71 | -1.69E-46 |
MS.gene054707 | MS.gene43940 | 0.837896 | 3.97E-57 | -1.69E-46 |
MS.gene054708 | MS.gene43940 | 0.816541 | 5.24E-52 | -1.69E-46 |
MS.gene05470 | MS.gene43940 | -0.836523 | 8.90E-57 | -1.69E-46 |
MS.gene054742 | MS.gene43940 | 0.809986 | 1.44E-50 | -1.69E-46 |
MS.gene054927 | MS.gene43940 | -0.81199 | 5.31E-51 | -1.69E-46 |
MS.gene05494 | MS.gene43940 | -0.808087 | 3.68E-50 | -1.69E-46 |
MS.gene054954 | MS.gene43940 | -0.858643 | 7.15E-63 | -1.69E-46 |
MS.gene054959 | MS.gene43940 | 0.826368 | 2.82E-54 | -1.69E-46 |
MS.gene05505 | MS.gene43940 | -0.806234 | 9.08E-50 | -1.69E-46 |
MS.gene055154 | MS.gene43940 | 0.851307 | 9.66E-61 | -1.69E-46 |
MS.gene055202 | MS.gene43940 | 0.807022 | 6.19E-50 | -1.69E-46 |
MS.gene055206 | MS.gene43940 | -0.851138 | 1.08E-60 | -1.69E-46 |
MS.gene055224 | MS.gene43940 | -0.819268 | 1.27E-52 | -1.69E-46 |
MS.gene055289 | MS.gene43940 | -0.831969 | 1.23E-55 | -1.69E-46 |
MS.gene055362 | MS.gene43940 | -0.866443 | 2.84E-65 | -1.69E-46 |
MS.gene055502 | MS.gene43940 | -0.884785 | 1.43E-71 | -1.69E-46 |
MS.gene055577 | MS.gene43940 | -0.879228 | 1.48E-69 | -1.69E-46 |
MS.gene055722 | MS.gene43940 | -0.812895 | 3.37E-51 | -1.69E-46 |
MS.gene055748 | MS.gene43940 | -0.83204 | 1.19E-55 | -1.69E-46 |
MS.gene055750 | MS.gene43940 | -0.82946 | 5.08E-55 | -1.69E-46 |
MS.gene055751 | MS.gene43940 | -0.824553 | 7.58E-54 | -1.69E-46 |
MS.gene05589 | MS.gene43940 | -0.847531 | 1.09E-59 | -1.69E-46 |
MS.gene055941 | MS.gene43940 | -0.842488 | 2.51E-58 | -1.69E-46 |
MS.gene056046 | MS.gene43940 | -0.815314 | 9.85E-52 | -1.69E-46 |
MS.gene056083 | MS.gene43940 | -0.808643 | 2.80E-50 | -1.69E-46 |
MS.gene056224 | MS.gene43940 | 0.806219 | 9.15E-50 | -1.69E-46 |
MS.gene056374 | MS.gene43940 | -0.805444 | 1.33E-49 | -1.69E-46 |
MS.gene056387 | MS.gene43940 | -0.809859 | 1.54E-50 | -1.69E-46 |
MS.gene056409 | MS.gene43940 | -0.804719 | 1.89E-49 | -1.69E-46 |
MS.gene056448 | MS.gene43940 | -0.814516 | 1.48E-51 | -1.69E-46 |
MS.gene056487 | MS.gene43940 | -0.82437 | 8.38E-54 | -1.69E-46 |
MS.gene056504 | MS.gene43940 | -0.871747 | 5.40E-67 | -1.69E-46 |
MS.gene056510 | MS.gene43940 | -0.842456 | 2.56E-58 | -1.69E-46 |
MS.gene056550 | MS.gene43940 | 0.807286 | 5.44E-50 | -1.69E-46 |
MS.gene056590 | MS.gene43940 | 0.827893 | 1.22E-54 | -1.69E-46 |
MS.gene056591 | MS.gene43940 | 0.82834 | 9.49E-55 | -1.69E-46 |
MS.gene056610 | MS.gene43940 | -0.810767 | 9.79E-51 | -1.69E-46 |
MS.gene056657 | MS.gene43940 | -0.867169 | 1.67E-65 | -1.69E-46 |
MS.gene056688 | MS.gene43940 | 0.801443 | 8.98E-49 | -1.69E-46 |
MS.gene056692 | MS.gene43940 | -0.849927 | 2.36E-60 | -1.69E-46 |
MS.gene056856 | MS.gene43940 | 0.820926 | 5.30E-53 | -1.69E-46 |
MS.gene057014 | MS.gene43940 | 0.801208 | 1.00E-48 | -1.69E-46 |
MS.gene057076 | MS.gene43940 | -0.807224 | 5.61E-50 | -1.69E-46 |
MS.gene057086 | MS.gene43940 | -0.81607 | 6.68E-52 | -1.69E-46 |
MS.gene057261 | MS.gene43940 | 0.808877 | 2.50E-50 | -1.69E-46 |
MS.gene057331 | MS.gene43940 | -0.800234 | 1.59E-48 | -1.69E-46 |
MS.gene057416 | MS.gene43940 | -0.85192 | 6.48E-61 | -1.69E-46 |
MS.gene057658 | MS.gene43940 | -0.845359 | 4.27E-59 | -1.69E-46 |
MS.gene057831 | MS.gene43940 | -0.847702 | 9.79E-60 | -1.69E-46 |
MS.gene05787 | MS.gene43940 | -0.804329 | 2.28E-49 | -1.69E-46 |
MS.gene058019 | MS.gene43940 | -0.814708 | 1.34E-51 | -1.69E-46 |
MS.gene058067 | MS.gene43940 | 0.801153 | 1.03E-48 | -1.69E-46 |
MS.gene058068 | MS.gene43940 | 0.80414 | 2.49E-49 | -1.69E-46 |
MS.gene058099 | MS.gene43940 | 0.819393 | 1.19E-52 | -1.69E-46 |
MS.gene058111 | MS.gene43940 | 0.8026 | 5.19E-49 | -1.69E-46 |
MS.gene058130 | MS.gene43940 | -0.806299 | 8.80E-50 | -1.69E-46 |
MS.gene058157 | MS.gene43940 | -0.849042 | 4.17E-60 | -1.69E-46 |
MS.gene058171 | MS.gene43940 | 0.803487 | 3.41E-49 | -1.69E-46 |
MS.gene058175 | MS.gene43940 | 0.80254 | 5.34E-49 | -1.69E-46 |
MS.gene058268 | MS.gene43940 | 0.831282 | 1.82E-55 | -1.69E-46 |
MS.gene058269 | MS.gene43940 | 0.828456 | 8.90E-55 | -1.69E-46 |
MS.gene058334 | MS.gene43940 | 0.820586 | 6.34E-53 | -1.69E-46 |
MS.gene058338 | MS.gene43940 | -0.842294 | 2.82E-58 | -1.69E-46 |
MS.gene05837 | MS.gene43940 | -0.861732 | 8.35E-64 | -1.69E-46 |
MS.gene058382 | MS.gene43940 | 0.80894 | 2.42E-50 | -1.69E-46 |
MS.gene058419 | MS.gene43940 | -0.863504 | 2.37E-64 | -1.69E-46 |
MS.gene058544 | MS.gene43940 | -0.876776 | 1.07E-68 | -1.69E-46 |
MS.gene058603 | MS.gene43940 | 0.824864 | 6.41E-54 | -1.69E-46 |
MS.gene058723 | MS.gene43940 | -0.81937 | 1.20E-52 | -1.69E-46 |
MS.gene058773 | MS.gene43940 | -0.843204 | 1.62E-58 | -1.69E-46 |
MS.gene058838 | MS.gene43940 | -0.869089 | 4.02E-66 | -1.69E-46 |
MS.gene05883 | MS.gene43940 | -0.837684 | 4.50E-57 | -1.69E-46 |
MS.gene058840 | MS.gene43940 | 0.804181 | 2.44E-49 | -1.69E-46 |
MS.gene059022 | MS.gene43940 | -0.862586 | 4.56E-64 | -1.69E-46 |
MS.gene059023 | MS.gene43940 | -0.879656 | 1.04E-69 | -1.69E-46 |
MS.gene05913 | MS.gene43940 | -0.807225 | 5.61E-50 | -1.69E-46 |
MS.gene05914 | MS.gene43940 | -0.821239 | 4.49E-53 | -1.69E-46 |
MS.gene05934 | MS.gene43940 | -0.82117 | 4.66E-53 | -1.69E-46 |
MS.gene059367 | MS.gene43940 | -0.835333 | 1.78E-56 | -1.69E-46 |
MS.gene059536 | MS.gene43940 | -0.809143 | 2.19E-50 | -1.69E-46 |
MS.gene059667 | MS.gene43940 | -0.82671 | 2.34E-54 | -1.69E-46 |
MS.gene059677 | MS.gene43940 | -0.869546 | 2.86E-66 | -1.69E-46 |
MS.gene059682 | MS.gene43940 | 0.802861 | 4.59E-49 | -1.69E-46 |
MS.gene059699 | MS.gene43940 | 0.823538 | 1.31E-53 | -1.69E-46 |
MS.gene059703 | MS.gene43940 | 0.827553 | 1.47E-54 | -1.69E-46 |
MS.gene059718 | MS.gene43940 | -0.876662 | 1.17E-68 | -1.69E-46 |
MS.gene059756 | MS.gene43940 | -0.843575 | 1.29E-58 | -1.69E-46 |
MS.gene059801 | MS.gene43940 | -0.823434 | 1.39E-53 | -1.69E-46 |
MS.gene059865 | MS.gene43940 | -0.845328 | 4.35E-59 | -1.69E-46 |
MS.gene059902 | MS.gene43940 | -0.82404 | 1.00E-53 | -1.69E-46 |
MS.gene059953 | MS.gene43940 | 0.815039 | 1.13E-51 | -1.69E-46 |
MS.gene059955 | MS.gene43940 | 0.819479 | 1.14E-52 | -1.69E-46 |
MS.gene06000 | MS.gene43940 | -0.811931 | 5.47E-51 | -1.69E-46 |
MS.gene060405 | MS.gene43940 | 0.802475 | 5.51E-49 | -1.69E-46 |
MS.gene060482 | MS.gene43940 | -0.851214 | 1.03E-60 | -1.69E-46 |
MS.gene060703 | MS.gene43940 | -0.811352 | 7.31E-51 | -1.69E-46 |
MS.gene060762 | MS.gene43940 | -0.856246 | 3.66E-62 | -1.69E-46 |
MS.gene060778 | MS.gene43940 | -0.836349 | 9.86E-57 | -1.69E-46 |
MS.gene06077 | MS.gene43940 | -0.869587 | 2.77E-66 | -1.69E-46 |
MS.gene060804 | MS.gene43940 | -0.800768 | 1.23E-48 | -1.69E-46 |
MS.gene060823 | MS.gene43940 | 0.813859 | 2.07E-51 | -1.69E-46 |
MS.gene060835 | MS.gene43940 | -0.83177 | 1.38E-55 | -1.69E-46 |
MS.gene06092 | MS.gene43940 | -0.852748 | 3.77E-61 | -1.69E-46 |
MS.gene060982 | MS.gene43940 | -0.852022 | 6.06E-61 | -1.69E-46 |
MS.gene061041 | MS.gene43940 | -0.804717 | 1.89E-49 | -1.69E-46 |
MS.gene061150 | MS.gene43940 | -0.86341 | 2.54E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43940.t1 | MTR_1g079810 | 96.785 | 311 | 3 | 3 | 1 | 310 | 1 | 305 | 0.0 | 590 |
MS.gene43940.t1 | MTR_1g073860 | 52.000 | 325 | 106 | 10 | 1 | 310 | 33 | 322 | 4.25e-75 | 233 |
MS.gene43940.t1 | MTR_1g044155 | 64.159 | 226 | 75 | 5 | 1 | 225 | 55 | 275 | 4.35e-75 | 234 |
MS.gene43940.t1 | MTR_5g091630 | 62.963 | 162 | 60 | 0 | 74 | 235 | 45 | 206 | 2.79e-63 | 201 |
MS.gene43940.t1 | MTR_5g011520 | 62.434 | 189 | 71 | 0 | 41 | 229 | 65 | 253 | 5.19e-63 | 202 |
MS.gene43940.t1 | MTR_8g036060 | 71.084 | 166 | 48 | 0 | 76 | 241 | 86 | 251 | 4.43e-62 | 199 |
MS.gene43940.t1 | MTR_3g068035 | 66.667 | 153 | 45 | 1 | 86 | 238 | 89 | 235 | 6.49e-60 | 194 |
MS.gene43940.t1 | MTR_7g080980 | 62.500 | 152 | 57 | 0 | 85 | 236 | 66 | 217 | 2.88e-56 | 183 |
MS.gene43940.t1 | MTR_4g098450 | 63.087 | 149 | 55 | 0 | 83 | 231 | 83 | 231 | 1.47e-52 | 174 |
MS.gene43940.t1 | MTR_3g100470 | 43.049 | 223 | 117 | 5 | 24 | 242 | 26 | 242 | 1.23e-51 | 172 |
MS.gene43940.t1 | MTR_5g080580 | 60.452 | 177 | 68 | 1 | 49 | 225 | 64 | 238 | 4.43e-51 | 171 |
MS.gene43940.t1 | MTR_5g066020 | 43.103 | 174 | 89 | 4 | 85 | 253 | 60 | 228 | 4.27e-39 | 138 |
MS.gene43940.t1 | MTR_5g089600 | 33.951 | 162 | 96 | 3 | 73 | 223 | 74 | 235 | 1.79e-24 | 99.4 |
MS.gene43940.t1 | MTR_4g057487 | 32.941 | 170 | 104 | 2 | 73 | 232 | 14 | 183 | 3.57e-24 | 98.6 |
MS.gene43940.t1 | MTR_5g010330 | 36.207 | 174 | 98 | 5 | 71 | 232 | 99 | 271 | 3.39e-23 | 97.8 |
MS.gene43940.t1 | MTR_1g079780 | 41.912 | 136 | 75 | 2 | 85 | 216 | 88 | 223 | 9.77e-23 | 96.7 |
MS.gene43940.t1 | MTR_4g057525 | 31.176 | 170 | 107 | 2 | 69 | 228 | 29 | 198 | 2.20e-21 | 91.3 |
MS.gene43940.t1 | MTR_7g116320 | 46.903 | 113 | 60 | 0 | 103 | 215 | 143 | 255 | 2.00e-20 | 90.9 |
MS.gene43940.t1 | MTR_1g073870 | 43.791 | 153 | 39 | 4 | 71 | 223 | 47 | 152 | 2.02e-20 | 88.2 |
MS.gene43940.t1 | MTR_1g053685 | 30.952 | 168 | 107 | 1 | 73 | 231 | 82 | 249 | 5.84e-20 | 88.2 |
MS.gene43940.t1 | MTR_1g061530 | 44.348 | 115 | 58 | 3 | 106 | 215 | 144 | 257 | 1.47e-19 | 88.2 |
MS.gene43940.t1 | MTR_7g116320 | 44.800 | 125 | 65 | 1 | 103 | 223 | 143 | 267 | 2.00e-19 | 86.7 |
MS.gene43940.t1 | MTR_1g032910 | 32.203 | 177 | 104 | 4 | 70 | 232 | 95 | 269 | 4.87e-19 | 85.9 |
MS.gene43940.t1 | MTR_6g061670 | 39.655 | 116 | 67 | 1 | 103 | 215 | 130 | 245 | 2.69e-18 | 84.0 |
MS.gene43940.t1 | MTR_7g077120 | 37.297 | 185 | 97 | 5 | 68 | 236 | 119 | 300 | 2.94e-18 | 84.3 |
MS.gene43940.t1 | MTR_6g061670 | 39.655 | 116 | 67 | 1 | 103 | 215 | 125 | 240 | 3.62e-18 | 83.6 |
MS.gene43940.t1 | MTR_5g089700 | 30.128 | 156 | 100 | 3 | 74 | 220 | 73 | 228 | 7.37e-17 | 78.6 |
MS.gene43940.t1 | MTR_5g089090 | 32.515 | 163 | 98 | 2 | 69 | 222 | 21 | 180 | 9.85e-17 | 77.8 |
MS.gene43940.t1 | MTR_1g076710 | 41.379 | 116 | 64 | 2 | 103 | 215 | 134 | 248 | 8.03e-16 | 77.4 |
MS.gene43940.t1 | MTR_8g036160 | 41.228 | 114 | 63 | 1 | 106 | 215 | 145 | 258 | 1.78e-15 | 76.3 |
MS.gene43940.t1 | MTR_4g055813 | 35.156 | 128 | 81 | 2 | 102 | 227 | 18 | 145 | 2.02e-15 | 75.5 |
MS.gene43940.t1 | MTR_4g055803 | 37.008 | 127 | 68 | 3 | 106 | 223 | 128 | 251 | 6.82e-15 | 75.1 |
MS.gene43940.t1 | MTR_8g098390 | 32.000 | 150 | 91 | 4 | 94 | 234 | 157 | 304 | 1.11e-14 | 73.9 |
MS.gene43940.t1 | MTR_7g074935 | 47.761 | 67 | 35 | 0 | 106 | 172 | 130 | 196 | 1.34e-14 | 73.6 |
MS.gene43940.t1 | MTR_4g098460 | 33.553 | 152 | 76 | 5 | 76 | 215 | 57 | 195 | 1.47e-14 | 72.8 |
MS.gene43940.t1 | MTR_8g031100 | 37.576 | 165 | 95 | 3 | 76 | 232 | 125 | 289 | 2.88e-14 | 72.8 |
MS.gene43940.t1 | MTR_4g069110 | 36.842 | 95 | 60 | 0 | 74 | 168 | 32 | 126 | 7.01e-14 | 68.9 |
MS.gene43940.t1 | MTR_8g078930 | 32.593 | 135 | 81 | 3 | 107 | 232 | 5 | 138 | 1.22e-13 | 68.2 |
MS.gene43940.t1 | MTR_4g055833 | 38.211 | 123 | 64 | 3 | 102 | 215 | 121 | 240 | 1.82e-13 | 70.5 |
MS.gene43940.t1 | MTR_5g011620 | 33.945 | 109 | 70 | 1 | 107 | 215 | 119 | 225 | 3.53e-13 | 70.5 |
MS.gene43940.t1 | MTR_5g011610 | 33.333 | 117 | 75 | 2 | 107 | 222 | 62 | 176 | 1.47e-12 | 67.8 |
MS.gene43940.t1 | MTR_4g098460 | 32.484 | 157 | 76 | 6 | 76 | 215 | 57 | 200 | 1.97e-12 | 67.0 |
MS.gene43940.t1 | MTR_5g011680 | 32.258 | 124 | 77 | 2 | 106 | 222 | 145 | 268 | 5.45e-12 | 65.5 |
MS.gene43940.t1 | MTR_4g101990 | 40.299 | 67 | 40 | 0 | 106 | 172 | 147 | 213 | 2.25e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43940.t1 | AT3G04570 | 61.603 | 237 | 79 | 3 | 1 | 225 | 1 | 237 | 3.76e-79 | 243 |
MS.gene43940.t1 | AT4G14465 | 50.313 | 320 | 110 | 10 | 1 | 310 | 1 | 281 | 6.21e-79 | 241 |
MS.gene43940.t1 | AT2G35270 | 64.744 | 156 | 55 | 0 | 76 | 231 | 78 | 233 | 2.11e-62 | 199 |
MS.gene43940.t1 | AT2G42940 | 61.078 | 167 | 60 | 1 | 76 | 237 | 53 | 219 | 1.49e-60 | 194 |
MS.gene43940.t1 | AT3G60870 | 60.927 | 151 | 57 | 1 | 70 | 220 | 53 | 201 | 7.85e-58 | 187 |
MS.gene43940.t1 | AT2G45430 | 67.251 | 171 | 51 | 3 | 72 | 238 | 85 | 254 | 1.69e-57 | 188 |
MS.gene43940.t1 | AT4G22810 | 58.763 | 194 | 77 | 1 | 41 | 231 | 70 | 263 | 6.47e-57 | 187 |
MS.gene43940.t1 | AT4G12050 | 58.854 | 192 | 78 | 1 | 41 | 231 | 83 | 274 | 9.57e-57 | 187 |
MS.gene43940.t1 | AT3G55560 | 43.849 | 317 | 145 | 10 | 1 | 301 | 1 | 300 | 9.56e-53 | 175 |
MS.gene43940.t1 | AT4G17800 | 63.226 | 155 | 56 | 1 | 85 | 239 | 91 | 244 | 2.97e-51 | 171 |
MS.gene43940.t1 | AT4G35390 | 57.297 | 185 | 76 | 2 | 42 | 223 | 28 | 212 | 6.65e-50 | 167 |
MS.gene43940.t1 | AT5G49700 | 46.512 | 172 | 82 | 3 | 75 | 239 | 55 | 223 | 1.05e-49 | 166 |
MS.gene43940.t1 | AT1G20900 | 55.497 | 191 | 70 | 2 | 50 | 225 | 54 | 244 | 9.86e-49 | 165 |
MS.gene43940.t1 | AT1G14490 | 42.857 | 182 | 88 | 4 | 77 | 244 | 6 | 185 | 2.84e-39 | 137 |
MS.gene43940.t1 | AT1G14490 | 42.857 | 182 | 88 | 4 | 77 | 244 | 25 | 204 | 4.14e-39 | 137 |
MS.gene43940.t1 | AT4G25320 | 44.248 | 113 | 60 | 1 | 106 | 215 | 169 | 281 | 1.63e-21 | 94.4 |
MS.gene43940.t1 | AT5G51590 | 43.363 | 113 | 61 | 1 | 106 | 215 | 181 | 293 | 2.03e-21 | 94.0 |
MS.gene43940.t1 | AT5G62260 | 39.516 | 124 | 72 | 1 | 103 | 223 | 160 | 283 | 2.45e-21 | 92.0 |
MS.gene43940.t1 | AT1G63470 | 39.726 | 146 | 81 | 3 | 76 | 215 | 147 | 291 | 4.28e-21 | 92.8 |
MS.gene43940.t1 | AT4G12080 | 41.739 | 115 | 60 | 2 | 106 | 215 | 173 | 285 | 5.73e-21 | 92.0 |
MS.gene43940.t1 | AT3G04590 | 32.093 | 215 | 116 | 5 | 106 | 308 | 174 | 370 | 9.13e-21 | 92.0 |
MS.gene43940.t1 | AT5G62260 | 40.517 | 116 | 66 | 1 | 103 | 215 | 160 | 275 | 4.68e-20 | 90.1 |
MS.gene43940.t1 | AT5G62260 | 40.517 | 116 | 66 | 1 | 103 | 215 | 160 | 275 | 4.68e-20 | 90.1 |
MS.gene43940.t1 | AT3G04590 | 40.000 | 110 | 66 | 0 | 106 | 215 | 174 | 283 | 5.87e-20 | 88.6 |
MS.gene43940.t1 | AT2G45850 | 35.948 | 153 | 92 | 3 | 69 | 215 | 125 | 277 | 1.99e-19 | 87.8 |
MS.gene43940.t1 | AT2G45850 | 35.948 | 153 | 92 | 3 | 69 | 215 | 125 | 277 | 1.99e-19 | 87.8 |
MS.gene43940.t1 | AT2G45850 | 36.364 | 154 | 92 | 3 | 69 | 216 | 125 | 278 | 4.48e-19 | 85.5 |
MS.gene43940.t1 | AT4G17950 | 40.690 | 145 | 79 | 3 | 76 | 215 | 196 | 338 | 1.67e-18 | 85.9 |
MS.gene43940.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene43940.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene43940.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene43940.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene43940.t1 | AT4G00200 | 39.850 | 133 | 66 | 2 | 106 | 235 | 126 | 247 | 1.58e-14 | 73.2 |
MS.gene43940.t1 | AT4G00200 | 39.850 | 133 | 66 | 2 | 106 | 235 | 126 | 247 | 1.58e-14 | 73.2 |
MS.gene43940.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 130 | 274 | 4.66e-14 | 72.4 |
MS.gene43940.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 130 | 274 | 4.66e-14 | 72.4 |
MS.gene43940.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene43940.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene43940.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene43940.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene43940.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene43940.t1 | AT5G46640 | 43.299 | 97 | 53 | 1 | 75 | 171 | 154 | 248 | 2.60e-13 | 70.1 |
MS.gene43940.t1 | AT3G61310 | 34.459 | 148 | 91 | 3 | 74 | 215 | 132 | 279 | 2.82e-12 | 67.0 |
MS.gene43940.t1 | AT4G22770 | 39.823 | 113 | 65 | 1 | 106 | 215 | 153 | 265 | 3.81e-12 | 66.6 |
MS.gene43940.t1 | AT4G22770 | 39.823 | 113 | 65 | 1 | 106 | 215 | 153 | 265 | 3.81e-12 | 66.6 |
Find 121 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGACTATTTATCTTTC+TGG | 0.085538 | 1.4:-64811779 | MS.gene43940:CDS |
GGAGCTATGGTGGCGCTTCC+TGG | 0.123030 | 1.4:-64811866 | MS.gene43940:CDS |
TAACAATGTTGGTGGTAATT+TGG | 0.176970 | 1.4:-64811504 | MS.gene43940:CDS |
GGGCATCAAGGTGGTGGTGG+TGG | 0.274335 | 1.4:-64811623 | MS.gene43940:CDS |
GTTAATTAGTATACTTAGTA+TGG | 0.281421 | 1.4:+64811395 | None:intergenic |
CATCAAGGTGGTGGTGGTGG+TGG | 0.310580 | 1.4:-64811620 | MS.gene43940:CDS |
TGTTACAGCACTTTGGTTCA+TGG | 0.311013 | 1.4:+64812225 | None:intergenic |
AACCTGATGGACGGCCTCTT+GGG | 0.312471 | 1.4:+64812089 | None:intergenic |
GTTATGAATATCGGTGGTTT+TGG | 0.313396 | 1.4:+64812055 | None:intergenic |
GGCCGGGCCGGTTATGTTGA+TGG | 0.324168 | 1.4:-64811708 | MS.gene43940:CDS |
TCCACTAGGAAAACCGGATC+TGG | 0.327318 | 1.4:-64812254 | MS.gene43940:CDS |
GAACCTGATGGACGGCCTCT+TGG | 0.345631 | 1.4:+64812088 | None:intergenic |
ACATGGCTTCGTAGCGCGTT+AGG | 0.352279 | 1.4:+64812022 | None:intergenic |
TTGACCGGTTCAGTGCTTCC+TGG | 0.357484 | 1.4:-64811824 | MS.gene43940:CDS |
AACAATGTTGGTGGTAATTT+GGG | 0.370360 | 1.4:-64811503 | MS.gene43940:CDS |
CCTTCACCGCCGGGAGCTAC+TGG | 0.381049 | 1.4:-64811800 | MS.gene43940:CDS |
GGTAATTTGGGTGTTTCAAA+TGG | 0.389870 | 1.4:-64811491 | MS.gene43940:CDS |
CTATCTCTTGTTATGAATAT+CGG | 0.390991 | 1.4:+64812046 | None:intergenic |
TCCACTTGTGGCGGCCGGGC+CGG | 0.400817 | 1.4:-64811720 | MS.gene43940:CDS |
GTTGGTCCACTTGTGGCGGC+CGG | 0.404963 | 1.4:-64811725 | MS.gene43940:CDS |
ATGAACCAAAGTGCTGTAAC+AGG | 0.409806 | 1.4:-64812223 | MS.gene43940:CDS |
TGGACCGGACCGGTTGGTCT+AGG | 0.409931 | 1.4:-64812304 | MS.gene43940:CDS |
CGCCCAAGAGGCCGTCCATC+AGG | 0.416707 | 1.4:-64812091 | MS.gene43940:CDS |
TCCGACGCGTGCCGCGGGGA+TGG | 0.423656 | 1.4:-64811579 | MS.gene43940:CDS |
CAGTTAGCAATTGGATCTGT+TGG | 0.425855 | 1.4:-64811554 | MS.gene43940:CDS |
GAGCTATGGTGGCGCTTCCT+GGG | 0.429894 | 1.4:-64811865 | MS.gene43940:CDS |
GAGTCTCCGACGCGTGCCGC+GGG | 0.430495 | 1.4:-64811584 | MS.gene43940:CDS |
CTCCTCTCCACTAGGAAAAC+CGG | 0.439999 | 1.4:-64812260 | MS.gene43940:CDS |
ACTCAACTTTGATGGCAAAC+AGG | 0.443330 | 1.4:-64812330 | None:intergenic |
CCGACGCGTGCCGCGGGGAT+GGG | 0.452814 | 1.4:-64811578 | MS.gene43940:CDS |
AGGAAGCGCCACCATAGCTC+CGG | 0.468113 | 1.4:+64811868 | None:intergenic |
GTGGTTGGCGGTGGTGTGGT+TGG | 0.473855 | 1.4:-64811743 | MS.gene43940:CDS |
GTATGAGAGGCTGCCGGTTG+AGG | 0.473968 | 1.4:-64811663 | MS.gene43940:CDS |
GGGATGGGACAGTTAGCAAT+TGG | 0.474463 | 1.4:-64811563 | MS.gene43940:CDS |
GAAGGGCATCAAGGTGGTGG+TGG | 0.477044 | 1.4:-64811626 | MS.gene43940:CDS |
CCCTCCTAGACCAACCGGTC+CGG | 0.477578 | 1.4:+64812300 | None:intergenic |
CTGTCGTTAACGTTTCTCTT+CGG | 0.480165 | 1.4:-64811904 | MS.gene43940:CDS |
GCTTCCTGGACCTTCACCGC+CGG | 0.480251 | 1.4:-64811810 | MS.gene43940:CDS |
TCCATCCCTCCTAGACCAAC+CGG | 0.482993 | 1.4:+64812295 | None:intergenic |
GTTTCTCTTCGGCAACCTAC+AGG | 0.485903 | 1.4:-64811893 | MS.gene43940:CDS |
CTTCCTGGACCTTCACCGCC+GGG | 0.487921 | 1.4:-64811809 | MS.gene43940:CDS |
TGATCATCACCATCCTCAAC+CGG | 0.488150 | 1.4:+64811650 | None:intergenic |
GTCGCCGCCATCAACATAAC+CGG | 0.488771 | 1.4:+64811701 | None:intergenic |
ACCTACAGGTCCCGGAGCTA+TGG | 0.490105 | 1.4:-64811879 | MS.gene43940:CDS |
CCAGTAGCTCCCGGCGGTGA+AGG | 0.497293 | 1.4:+64811800 | None:intergenic |
AGGTCCAGGAAGCACTGAAC+CGG | 0.501544 | 1.4:+64811820 | None:intergenic |
ATGAAGCTTATAATTCTCCC+TGG | 0.502086 | 1.4:-64811442 | MS.gene43940:CDS |
TTGGTCCACTTGTGGCGGCC+GGG | 0.506396 | 1.4:-64811724 | MS.gene43940:CDS |
TTCATGGAGAAACCCAGATC+CGG | 0.506944 | 1.4:+64812241 | None:intergenic |
CAGGAAGGGCATCAAGGTGG+TGG | 0.509483 | 1.4:-64811629 | MS.gene43940:CDS |
TGAAGCTTATAATTCTCCCT+GGG | 0.512515 | 1.4:-64811441 | MS.gene43940:CDS |
CCCATCCCCGCGGCACGCGT+CGG | 0.513325 | 1.4:+64811578 | None:intergenic |
CATGGCTTCGTAGCGCGTTA+GGG | 0.516021 | 1.4:+64812023 | None:intergenic |
CCCTGGGGTCATGCTAGTCA+TGG | 0.516025 | 1.4:-64811425 | MS.gene43940:CDS |
GCTCCCGGCGGTGAAGGTCC+AGG | 0.516377 | 1.4:+64811806 | None:intergenic |
ACCGGCCCGGCCGCCACAAG+TGG | 0.517030 | 1.4:+64811719 | None:intergenic |
CCACCAACATTGTTATAGCC+TGG | 0.521278 | 1.4:+64811512 | None:intergenic |
AAACAGGTGGTGGACCGGAC+CGG | 0.521308 | 1.4:-64812314 | MS.gene43940:CDS |
CTTTGATGGCAAACAGGTGG+TGG | 0.523292 | 1.4:-64812324 | None:intergenic |
ACCTCCACGCGCCGCCCAAG+AGG | 0.524400 | 1.4:-64812103 | MS.gene43940:CDS |
GCAATTGGATCTGTTGGAGA+AGG | 0.525138 | 1.4:-64811548 | MS.gene43940:CDS |
CGAGTCTCCGACGCGTGCCG+CGG | 0.526236 | 1.4:-64811585 | MS.gene43940:CDS |
TTACTCCTGTTACAGCACTT+TGG | 0.526257 | 1.4:+64812218 | None:intergenic |
ACCATGACTAGCATGACCCC+AGG | 0.526448 | 1.4:+64811424 | None:intergenic |
CGCCATCAACATAACCGGCC+CGG | 0.529330 | 1.4:+64811706 | None:intergenic |
GGTTGAGGATGGTGATGATC+AGG | 0.530058 | 1.4:-64811648 | MS.gene43940:CDS |
ACGGCCTCTTGGGCGGCGCG+TGG | 0.532452 | 1.4:+64812099 | None:intergenic |
CATGTCATGGAAGTAGCATC+AGG | 0.533990 | 1.4:-64812004 | MS.gene43940:CDS |
TTTGATATACTCTCTTTGAC+CGG | 0.534621 | 1.4:-64811839 | MS.gene43940:CDS |
GCCTCTTGGGCGGCGCGTGG+AGG | 0.535225 | 1.4:+64812102 | None:intergenic |
CTGATGCTACTTCCATGACA+TGG | 0.535449 | 1.4:+64812005 | None:intergenic |
CTTCGGCAACCTACAGGTCC+CGG | 0.535710 | 1.4:-64811887 | MS.gene43940:CDS |
CGCGCTACGAAGCCATGTCA+TGG | 0.542213 | 1.4:-64812017 | MS.gene43940:CDS |
ACCGGACCGGTTGGTCTAGG+AGG | 0.542357 | 1.4:-64812301 | MS.gene43940:CDS |
GGAAGCGCCACCATAGCTCC+GGG | 0.544398 | 1.4:+64811869 | None:intergenic |
TTTCGAATGCGACGTATGAG+AGG | 0.546898 | 1.4:-64811676 | MS.gene43940:CDS |
TGGTGTGGTTGGTCCACTTG+TGG | 0.553800 | 1.4:-64811732 | MS.gene43940:CDS |
CCACTAGGAAAACCGGATCT+GGG | 0.555591 | 1.4:-64812253 | MS.gene43940:CDS |
ATGGCAAACAGGTGGTGGAC+CGG | 0.556090 | 1.4:-64812319 | MS.gene43940:CDS |
CAAGGACAAGTGGTTGGCGG+TGG | 0.556749 | 1.4:-64811752 | MS.gene43940:CDS |
ATTTATCTTTCTGGAGGACA+AGG | 0.556764 | 1.4:-64811770 | MS.gene43940:CDS |
ACCGGTTGGTCTAGGAGGGA+TGG | 0.562112 | 1.4:-64812296 | MS.gene43940:CDS |
TACAGGTCCCGGAGCTATGG+TGG | 0.562505 | 1.4:-64811876 | MS.gene43940:CDS |
CCGGACCGGTTGGTCTAGGA+GGG | 0.566185 | 1.4:-64812300 | MS.gene43940:CDS |
CCAGGCTATAACAATGTTGG+TGG | 0.566237 | 1.4:-64811512 | MS.gene43940:CDS |
TTGACTATTTATCTTTCTGG+AGG | 0.567765 | 1.4:-64811776 | MS.gene43940:CDS |
CCACCAGGCTATAACAATGT+TGG | 0.572328 | 1.4:-64811515 | MS.gene43940:CDS |
GGACAAGGACAAGTGGTTGG+CGG | 0.574410 | 1.4:-64811755 | MS.gene43940:CDS |
AATTTGGGTGTTTCAAATGG+AGG | 0.577814 | 1.4:-64811488 | MS.gene43940:CDS |
AGCGACGAACACAAAGGAGG+TGG | 0.581244 | 1.4:-64812139 | MS.gene43940:CDS |
ACAAGTGGTTGGCGGTGGTG+TGG | 0.585162 | 1.4:-64811747 | MS.gene43940:CDS |
GATGATCAGGAAGGGCATCA+AGG | 0.592117 | 1.4:-64811635 | MS.gene43940:CDS |
TCAGTAACCTCCTCTCCACT+AGG | 0.593822 | 1.4:-64812268 | MS.gene43940:CDS |
ATAGTCAAACCAGTAGCTCC+CGG | 0.594640 | 1.4:+64811791 | None:intergenic |
GGAGGACAAGGACAAGTGGT+TGG | 0.595598 | 1.4:-64811758 | MS.gene43940:CDS |
AATTAGTATACTTAGTATGG+TGG | 0.597096 | 1.4:+64811398 | None:intergenic |
ATTTGCATTCTAAGCGCAAG+TGG | 0.597435 | 1.4:-64811929 | MS.gene43940:CDS |
CTGATGGACGGCCTCTTGGG+CGG | 0.597863 | 1.4:+64812092 | None:intergenic |
GAGAGGCTGCCGGTTGAGGA+TGG | 0.598538 | 1.4:-64811659 | MS.gene43940:CDS |
TCTCTTGTTATGAATATCGG+TGG | 0.603718 | 1.4:+64812049 | None:intergenic |
TTCTGGAGGACAAGGACAAG+TGG | 0.603921 | 1.4:-64811762 | MS.gene43940:CDS |
ACCATAGCTCCGGGACCTGT+AGG | 0.618743 | 1.4:+64811878 | None:intergenic |
AGGTGGTGGACCGGACCGGT+TGG | 0.621643 | 1.4:-64812310 | MS.gene43940:CDS |
GAGAGTATATCAAATCTCCC+AGG | 0.628363 | 1.4:+64811848 | None:intergenic |
TGTGGTTGGTCCACTTGTGG+CGG | 0.637462 | 1.4:-64811729 | MS.gene43940:CDS |
GAAGGTTCTTCAATTCCACC+AGG | 0.641251 | 1.4:-64811530 | MS.gene43940:CDS |
GAGGATGGTGATGATCAGGA+AGG | 0.642087 | 1.4:-64811644 | MS.gene43940:CDS |
GAAAACAGCGACGAACACAA+AGG | 0.642908 | 1.4:-64812145 | MS.gene43940:CDS |
AGGATGGTGATGATCAGGAA+GGG | 0.650071 | 1.4:-64811643 | MS.gene43940:CDS |
AGTCTCCGACGCGTGCCGCG+GGG | 0.661832 | 1.4:-64811583 | MS.gene43940:CDS |
AACAGCGACGAACACAAAGG+AGG | 0.671516 | 1.4:-64812142 | MS.gene43940:CDS |
CAACTTTGATGGCAAACAGG+TGG | 0.677591 | 1.4:-64812327 | None:intergenic |
TGCGACGTATGAGAGGCTGC+CGG | 0.686290 | 1.4:-64811669 | MS.gene43940:CDS |
CCAACATTGTTATAGCCTGG+TGG | 0.688924 | 1.4:+64811515 | None:intergenic |
CCATGACTAGCATGACCCCA+GGG | 0.694474 | 1.4:+64811425 | None:intergenic |
CGGGCCGGTTATGTTGATGG+CGG | 0.696514 | 1.4:-64811705 | MS.gene43940:CDS |
TGCTAACTGTCCCATCCCCG+CGG | 0.697320 | 1.4:+64811568 | None:intergenic |
GATCAGGAAGGGCATCAAGG+TGG | 0.707265 | 1.4:-64811632 | MS.gene43940:CDS |
TTTGCAAGAAAACGACAGAG+AGG | 0.730654 | 1.4:-64811953 | MS.gene43940:CDS |
GAAGCTTATAATTCTCCCTG+GGG | 0.741712 | 1.4:-64811440 | MS.gene43940:CDS |
GTCAAACCAGTAGCTCCCGG+CGG | 0.770924 | 1.4:+64811794 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTATCTCTTGTTATGAATAT+CGG | + | chr1.4:64811685-64811704 | None:intergenic | 25.0% |
GGTTTGACTATTTATCTTTC+TGG | - | chr1.4:64811949-64811968 | MS.gene43940:CDS | 30.0% | |
TTGACTATTTATCTTTCTGG+AGG | - | chr1.4:64811952-64811971 | MS.gene43940:CDS | 30.0% | |
TTTGATATACTCTCTTTGAC+CGG | - | chr1.4:64811889-64811908 | MS.gene43940:CDS | 30.0% | |
!! | AACAATGTTGGTGGTAATTT+GGG | - | chr1.4:64812225-64812244 | MS.gene43940:CDS | 30.0% |
!! | TAACAATGTTGGTGGTAATT+TGG | - | chr1.4:64812224-64812243 | MS.gene43940:CDS | 30.0% |
AATTTGGGTGTTTCAAATGG+AGG | - | chr1.4:64812240-64812259 | MS.gene43940:CDS | 35.0% | |
ATGAAGCTTATAATTCTCCC+TGG | - | chr1.4:64812286-64812305 | MS.gene43940:CDS | 35.0% | |
GGTAATTTGGGTGTTTCAAA+TGG | - | chr1.4:64812237-64812256 | MS.gene43940:CDS | 35.0% | |
TGAAGCTTATAATTCTCCCT+GGG | - | chr1.4:64812287-64812306 | MS.gene43940:CDS | 35.0% | |
! | ATTTATCTTTCTGGAGGACA+AGG | - | chr1.4:64811958-64811977 | MS.gene43940:CDS | 35.0% |
! | GTTATGAATATCGGTGGTTT+TGG | + | chr1.4:64811676-64811695 | None:intergenic | 35.0% |
! | TCTCTTGTTATGAATATCGG+TGG | + | chr1.4:64811682-64811701 | None:intergenic | 35.0% |
!!! | GGTTTGTTTTTTGAACCTGA+TGG | + | chr1.4:64811655-64811674 | None:intergenic | 35.0% |
!!! | TGTTTTTTGAACCTGATGGA+CGG | + | chr1.4:64811651-64811670 | None:intergenic | 35.0% |
ATTTGCATTCTAAGCGCAAG+TGG | - | chr1.4:64811799-64811818 | MS.gene43940:CDS | 40.0% | |
CAGTTAGCAATTGGATCTGT+TGG | - | chr1.4:64812174-64812193 | MS.gene43940:CDS | 40.0% | |
CTGTCGTTAACGTTTCTCTT+CGG | - | chr1.4:64811824-64811843 | MS.gene43940:CDS | 40.0% | |
GAAGCTTATAATTCTCCCTG+GGG | - | chr1.4:64812288-64812307 | MS.gene43940:CDS | 40.0% | |
TTACTCCTGTTACAGCACTT+TGG | + | chr1.4:64811513-64811532 | None:intergenic | 40.0% | |
TTTGCAAGAAAACGACAGAG+AGG | - | chr1.4:64811775-64811794 | MS.gene43940:CDS | 40.0% | |
! | GAGAGTATATCAAATCTCCC+AGG | + | chr1.4:64811883-64811902 | None:intergenic | 40.0% |
! | TGTTACAGCACTTTGGTTCA+TGG | + | chr1.4:64811506-64811525 | None:intergenic | 40.0% |
!! | ATGAACCAAAGTGCTGTAAC+AGG | - | chr1.4:64811505-64811524 | MS.gene43940:CDS | 40.0% |
ATAGTCAAACCAGTAGCTCC+CGG | + | chr1.4:64811940-64811959 | None:intergenic | 45.0% | |
CATGTCATGGAAGTAGCATC+AGG | - | chr1.4:64811724-64811743 | MS.gene43940:CDS | 45.0% | |
CCAACATTGTTATAGCCTGG+TGG | + | chr1.4:64812216-64812235 | None:intergenic | 45.0% | |
CCACCAACATTGTTATAGCC+TGG | + | chr1.4:64812219-64812238 | None:intergenic | 45.0% | |
CCACCAGGCTATAACAATGT+TGG | - | chr1.4:64812213-64812232 | MS.gene43940:CDS | 45.0% | |
CCAGGCTATAACAATGTTGG+TGG | - | chr1.4:64812216-64812235 | MS.gene43940:CDS | 45.0% | |
GAAAACAGCGACGAACACAA+AGG | - | chr1.4:64811583-64811602 | MS.gene43940:CDS | 45.0% | |
GAAGGTTCTTCAATTCCACC+AGG | - | chr1.4:64812198-64812217 | MS.gene43940:CDS | 45.0% | |
GCAATTGGATCTGTTGGAGA+AGG | - | chr1.4:64812180-64812199 | MS.gene43940:CDS | 45.0% | |
TGATCATCACCATCCTCAAC+CGG | + | chr1.4:64812081-64812100 | None:intergenic | 45.0% | |
TTCATGGAGAAACCCAGATC+CGG | + | chr1.4:64811490-64811509 | None:intergenic | 45.0% | |
TTTCGAATGCGACGTATGAG+AGG | - | chr1.4:64812052-64812071 | MS.gene43940:CDS | 45.0% | |
! | AGGATGGTGATGATCAGGAA+GGG | - | chr1.4:64812085-64812104 | MS.gene43940:CDS | 45.0% |
! | CTGATGCTACTTCCATGACA+TGG | + | chr1.4:64811726-64811745 | None:intergenic | 45.0% |
AACAGCGACGAACACAAAGG+AGG | - | chr1.4:64811586-64811605 | MS.gene43940:CDS | 50.0% | |
CCACTAGGAAAACCGGATCT+GGG | - | chr1.4:64811475-64811494 | MS.gene43940:CDS | 50.0% | |
CTCCTCTCCACTAGGAAAAC+CGG | - | chr1.4:64811468-64811487 | MS.gene43940:CDS | 50.0% | |
GGGATGGGACAGTTAGCAAT+TGG | - | chr1.4:64812165-64812184 | MS.gene43940:CDS | 50.0% | |
GTTTCTCTTCGGCAACCTAC+AGG | - | chr1.4:64811835-64811854 | MS.gene43940:CDS | 50.0% | |
TCAGTAACCTCCTCTCCACT+AGG | - | chr1.4:64811460-64811479 | MS.gene43940:CDS | 50.0% | |
TCCACTAGGAAAACCGGATC+TGG | - | chr1.4:64811474-64811493 | MS.gene43940:CDS | 50.0% | |
! | ATCCGGTTTTCCTAGTGGAG+AGG | + | chr1.4:64811473-64811492 | None:intergenic | 50.0% |
! | GAGGATGGTGATGATCAGGA+AGG | - | chr1.4:64812084-64812103 | MS.gene43940:CDS | 50.0% |
! | GGTTGAGGATGGTGATGATC+AGG | - | chr1.4:64812080-64812099 | MS.gene43940:CDS | 50.0% |
! | TTCTGGAGGACAAGGACAAG+TGG | - | chr1.4:64811966-64811985 | MS.gene43940:CDS | 50.0% |
!! | GATGATCAGGAAGGGCATCA+AGG | - | chr1.4:64812093-64812112 | MS.gene43940:CDS | 50.0% |
ACATGGCTTCGTAGCGCGTT+AGG | + | chr1.4:64811709-64811728 | None:intergenic | 55.0% | |
ACCATGACTAGCATGACCCC+AGG | + | chr1.4:64812307-64812326 | None:intergenic | 55.0% | |
AGCGACGAACACAAAGGAGG+TGG | - | chr1.4:64811589-64811608 | MS.gene43940:CDS | 55.0% | |
CATGGCTTCGTAGCGCGTTA+GGG | + | chr1.4:64811708-64811727 | None:intergenic | 55.0% | |
CCATGACTAGCATGACCCCA+GGG | + | chr1.4:64812306-64812325 | None:intergenic | 55.0% | |
GGACAAGGACAAGTGGTTGG+CGG | - | chr1.4:64811973-64811992 | MS.gene43940:CDS | 55.0% | |
GGAGGACAAGGACAAGTGGT+TGG | - | chr1.4:64811970-64811989 | MS.gene43940:CDS | 55.0% | |
GTCGCCGCCATCAACATAAC+CGG | + | chr1.4:64812030-64812049 | None:intergenic | 55.0% | |
TCCATCCCTCCTAGACCAAC+CGG | + | chr1.4:64811436-64811455 | None:intergenic | 55.0% | |
! | AACCTGATGGACGGCCTCTT+GGG | + | chr1.4:64811642-64811661 | None:intergenic | 55.0% |
! | CCCAGATCCGGTTTTCCTAG+TGG | + | chr1.4:64811478-64811497 | None:intergenic | 55.0% |
! | CGGTTTTCCTAGTGGAGAGG+AGG | + | chr1.4:64811470-64811489 | None:intergenic | 55.0% |
! | TGGTGTGGTTGGTCCACTTG+TGG | - | chr1.4:64811996-64812015 | MS.gene43940:CDS | 55.0% |
! | TGTGGTTGGTCCACTTGTGG+CGG | - | chr1.4:64811999-64812018 | MS.gene43940:CDS | 55.0% |
! | TTGACCGGTTCAGTGCTTCC+TGG | - | chr1.4:64811904-64811923 | MS.gene43940:CDS | 55.0% |
!! | AGGTCCAGGAAGCACTGAAC+CGG | + | chr1.4:64811911-64811930 | None:intergenic | 55.0% |
!! | ATGGCAAACAGGTGGTGGAC+CGG | - | chr1.4:64811409-64811428 | MS.gene43940:CDS | 55.0% |
!! | GATCAGGAAGGGCATCAAGG+TGG | - | chr1.4:64812096-64812115 | MS.gene43940:CDS | 55.0% |
ACAAGTGGTTGGCGGTGGTG+TGG | - | chr1.4:64811981-64812000 | MS.gene43940:CDS | 60.0% | |
ACCATAGCTCCGGGACCTGT+AGG | + | chr1.4:64811853-64811872 | None:intergenic | 60.0% | |
ACCTACAGGTCCCGGAGCTA+TGG | - | chr1.4:64811849-64811868 | MS.gene43940:CDS | 60.0% | |
CAAGGACAAGTGGTTGGCGG+TGG | - | chr1.4:64811976-64811995 | MS.gene43940:CDS | 60.0% | |
CCCTGGGGTCATGCTAGTCA+TGG | - | chr1.4:64812303-64812322 | MS.gene43940:CDS | 60.0% | |
CGCCATCAACATAACCGGCC+CGG | + | chr1.4:64812025-64812044 | None:intergenic | 60.0% | |
CGCGCTACGAAGCCATGTCA+TGG | - | chr1.4:64811711-64811730 | MS.gene43940:CDS | 60.0% | |
CTTCGGCAACCTACAGGTCC+CGG | - | chr1.4:64811841-64811860 | MS.gene43940:CDS | 60.0% | |
GTCAAACCAGTAGCTCCCGG+CGG | + | chr1.4:64811937-64811956 | None:intergenic | 60.0% | |
TACAGGTCCCGGAGCTATGG+TGG | - | chr1.4:64811852-64811871 | MS.gene43940:CDS | 60.0% | |
TGCGACGTATGAGAGGCTGC+CGG | - | chr1.4:64812059-64812078 | MS.gene43940:CDS | 60.0% | |
TGCTAACTGTCCCATCCCCG+CGG | + | chr1.4:64812163-64812182 | None:intergenic | 60.0% | |
! | CGGGCCGGTTATGTTGATGG+CGG | - | chr1.4:64812023-64812042 | MS.gene43940:CDS | 60.0% |
! | GAACCTGATGGACGGCCTCT+TGG | + | chr1.4:64811643-64811662 | None:intergenic | 60.0% |
! | GAGCTATGGTGGCGCTTCCT+GGG | - | chr1.4:64811863-64811882 | MS.gene43940:CDS | 60.0% |
! | GTATGAGAGGCTGCCGGTTG+AGG | - | chr1.4:64812065-64812084 | MS.gene43940:CDS | 60.0% |
!! | AAACAGGTGGTGGACCGGAC+CGG | - | chr1.4:64811414-64811433 | MS.gene43940:CDS | 60.0% |
!! | ACCGGTTGGTCTAGGAGGGA+TGG | - | chr1.4:64811432-64811451 | MS.gene43940:CDS | 60.0% |
!! | AGGAAGCGCCACCATAGCTC+CGG | + | chr1.4:64811863-64811882 | None:intergenic | 60.0% |
!! | CAGGAAGGGCATCAAGGTGG+TGG | - | chr1.4:64812099-64812118 | MS.gene43940:CDS | 60.0% |
!! | CATCAAGGTGGTGGTGGTGG+TGG | - | chr1.4:64812108-64812127 | MS.gene43940:CDS | 60.0% |
!! | GAAGGGCATCAAGGTGGTGG+TGG | - | chr1.4:64812102-64812121 | MS.gene43940:CDS | 60.0% |
CCCTCCTAGACCAACCGGTC+CGG | + | chr1.4:64811431-64811450 | None:intergenic | 65.0% | |
CTTCCTGGACCTTCACCGCC+GGG | - | chr1.4:64811919-64811938 | MS.gene43940:CDS | 65.0% | |
GCTTCCTGGACCTTCACCGC+CGG | - | chr1.4:64811918-64811937 | MS.gene43940:CDS | 65.0% | |
GGCCGGGCCGGTTATGTTGA+TGG | - | chr1.4:64812020-64812039 | MS.gene43940:CDS | 65.0% | |
GTGGTTGGCGGTGGTGTGGT+TGG | - | chr1.4:64811985-64812004 | MS.gene43940:CDS | 65.0% | |
GTTGGTCCACTTGTGGCGGC+CGG | - | chr1.4:64812003-64812022 | MS.gene43940:CDS | 65.0% | |
TTGGTCCACTTGTGGCGGCC+GGG | - | chr1.4:64812004-64812023 | MS.gene43940:CDS | 65.0% | |
! | CTGATGGACGGCCTCTTGGG+CGG | + | chr1.4:64811639-64811658 | None:intergenic | 65.0% |
! | GAGAGGCTGCCGGTTGAGGA+TGG | - | chr1.4:64812069-64812088 | MS.gene43940:CDS | 65.0% |
! | GGAGCTATGGTGGCGCTTCC+TGG | - | chr1.4:64811862-64811881 | MS.gene43940:CDS | 65.0% |
!! | ACCGGACCGGTTGGTCTAGG+AGG | - | chr1.4:64811427-64811446 | MS.gene43940:CDS | 65.0% |
!! | CAAGGTGGTGGTGGTGGTGG+TGG | - | chr1.4:64812111-64812130 | MS.gene43940:CDS | 65.0% |
!! | CCGGACCGGTTGGTCTAGGA+GGG | - | chr1.4:64811428-64811447 | MS.gene43940:CDS | 65.0% |
!! | GGAAGCGCCACCATAGCTCC+GGG | + | chr1.4:64811862-64811881 | None:intergenic | 65.0% |
!! | GGGCATCAAGGTGGTGGTGG+TGG | - | chr1.4:64812105-64812124 | MS.gene43940:CDS | 65.0% |
!! | TGGACCGGACCGGTTGGTCT+AGG | - | chr1.4:64811424-64811443 | MS.gene43940:CDS | 65.0% |
CCAGTAGCTCCCGGCGGTGA+AGG | + | chr1.4:64811931-64811950 | None:intergenic | 70.0% | |
CCTTCACCGCCGGGAGCTAC+TGG | - | chr1.4:64811928-64811947 | MS.gene43940:CDS | 70.0% | |
CGCCCAAGAGGCCGTCCATC+AGG | - | chr1.4:64811637-64811656 | MS.gene43940:CDS | 70.0% | |
!! | AGGTGGTGGACCGGACCGGT+TGG | - | chr1.4:64811418-64811437 | MS.gene43940:CDS | 70.0% |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr1.4:64812114-64812133 | MS.gene43940:CDS | 70.0% |
ACCTCCACGCGCCGCCCAAG+AGG | - | chr1.4:64811625-64811644 | MS.gene43940:CDS | 75.0% | |
AGTCTCCGACGCGTGCCGCG+GGG | - | chr1.4:64812145-64812164 | MS.gene43940:CDS | 75.0% | |
CGAGTCTCCGACGCGTGCCG+CGG | - | chr1.4:64812143-64812162 | MS.gene43940:CDS | 75.0% | |
GAGTCTCCGACGCGTGCCGC+GGG | - | chr1.4:64812144-64812163 | MS.gene43940:CDS | 75.0% | |
GCTCCCGGCGGTGAAGGTCC+AGG | + | chr1.4:64811925-64811944 | None:intergenic | 75.0% | |
TCCACTTGTGGCGGCCGGGC+CGG | - | chr1.4:64812008-64812027 | MS.gene43940:CDS | 75.0% | |
! | ACCGGCCCGGCCGCCACAAG+TGG | + | chr1.4:64812012-64812031 | None:intergenic | 80.0% |
! | ACGGCCTCTTGGGCGGCGCG+TGG | + | chr1.4:64811632-64811651 | None:intergenic | 80.0% |
! | CCCATCCCCGCGGCACGCGT+CGG | + | chr1.4:64812153-64812172 | None:intergenic | 80.0% |
! | CCGACGCGTGCCGCGGGGAT+GGG | - | chr1.4:64812150-64812169 | MS.gene43940:CDS | 80.0% |
! | GCCTCTTGGGCGGCGCGTGG+AGG | + | chr1.4:64811629-64811648 | None:intergenic | 80.0% |
! | TCCGACGCGTGCCGCGGGGA+TGG | - | chr1.4:64812149-64812168 | MS.gene43940:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 64811409 | 64812341 | 64811409 | ID=MS.gene43940 |
chr1.4 | mRNA | 64811409 | 64812341 | 64811409 | ID=MS.gene43940.t1;Parent=MS.gene43940 |
chr1.4 | exon | 64811409 | 64812341 | 64811409 | ID=MS.gene43940.t1.exon1;Parent=MS.gene43940.t1 |
chr1.4 | CDS | 64811409 | 64812341 | 64811409 | ID=cds.MS.gene43940.t1;Parent=MS.gene43940.t1 |
Gene Sequence |
Protein sequence |