Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101850 | XP_024630982.1 | 96.360 | 467 | 17 | 0 | 1 | 467 | 119 | 585 | 0.0 | 937 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101850 | sp|Q8VYD6|PP374_ARATH | 60.265 | 453 | 180 | 0 | 1 | 453 | 122 | 574 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101850 | A0A396JEZ4 | 96.360 | 467 | 17 | 0 | 1 | 467 | 119 | 585 | 0.0 | 937 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0101850 | 0.814891 | 1.222666e-51 | -8.615850e-47 |
| Msa0007930 | Msa0101850 | 0.900271 | 8.653855e-78 | -8.615850e-47 |
| Msa0009210 | Msa0101850 | 0.826301 | 2.924589e-54 | -8.615850e-47 |
| Msa0017120 | Msa0101850 | 0.816683 | 4.873249e-52 | -8.615850e-47 |
| Msa0034320 | Msa0101850 | 0.801734 | 7.831359e-49 | -8.615850e-47 |
| Msa0041540 | Msa0101850 | 0.815693 | 8.113183e-52 | -8.615850e-47 |
| Msa0049990 | Msa0101850 | 0.805338 | 1.400820e-49 | -8.615850e-47 |
| Msa0056370 | Msa0101850 | 0.830434 | 2.943240e-55 | -8.615850e-47 |
| Msa0058970 | Msa0101850 | 0.812030 | 5.203395e-51 | -8.615850e-47 |
| Msa0065390 | Msa0101850 | 0.840286 | 9.530860e-58 | -8.615850e-47 |
| Msa0077910 | Msa0101850 | 0.821130 | 4.753942e-53 | -8.615850e-47 |
| Msa0090800 | Msa0101850 | 0.810638 | 1.043557e-50 | -8.615850e-47 |
| Msa0091550 | Msa0101850 | 0.829081 | 6.282564e-55 | -8.615850e-47 |
| Msa0092660 | Msa0101850 | 0.810984 | 8.781588e-51 | -8.615850e-47 |
| Msa0092730 | Msa0101850 | 0.813679 | 2.264899e-51 | -8.615850e-47 |
| Msa0101850 | Msa0103780 | 0.832013 | 1.204231e-55 | -8.615850e-47 |
| Msa0101850 | Msa0110710 | 0.838419 | 2.907545e-57 | -8.615850e-47 |
| Msa0101850 | Msa0123900 | 0.807988 | 3.861933e-50 | -8.615850e-47 |
| Msa0101850 | Msa0125800 | 0.821746 | 3.426650e-53 | -8.615850e-47 |
| Msa0101850 | Msa0135980 | 0.812808 | 3.519005e-51 | -8.615850e-47 |
| Msa0101850 | Msa0137600 | 0.804140 | 2.491588e-49 | -8.615850e-47 |
| Msa0101850 | Msa0141670 | 0.807488 | 4.932884e-50 | -8.615850e-47 |
| Msa0101850 | Msa0146470 | 0.825485 | 4.570020e-54 | -8.615850e-47 |
| Msa0101850 | Msa0149070 | 0.800424 | 1.450801e-48 | -8.615850e-47 |
| Msa0101850 | Msa0150210 | 0.849806 | 2.552497e-60 | -8.615850e-47 |
| Msa0101850 | Msa0157020 | 0.812793 | 3.544817e-51 | -8.615850e-47 |
| Msa0101850 | Msa0170440 | 0.821256 | 4.446536e-53 | -8.615850e-47 |
| Msa0101850 | Msa0173610 | 0.800283 | 1.550117e-48 | -8.615850e-47 |
| Msa0101850 | Msa0185550 | 0.800896 | 1.162275e-48 | -8.615850e-47 |
| Msa0101850 | Msa0206970 | 0.810366 | 1.194640e-50 | -8.615850e-47 |
| Msa0101850 | Msa0217470 | 0.811002 | 8.705803e-51 | -8.615850e-47 |
| Msa0101850 | Msa0223390 | 0.810995 | 8.733541e-51 | -8.615850e-47 |
| Msa0101850 | Msa0247310 | 0.842676 | 2.235337e-58 | -8.615850e-47 |
| Msa0101850 | Msa0261440 | 0.803433 | 3.493783e-49 | -8.615850e-47 |
| Msa0101850 | Msa0274780 | 0.800357 | 1.497077e-48 | -8.615850e-47 |
| Msa0101850 | Msa0280140 | 0.819056 | 1.418900e-52 | -8.615850e-47 |
| Msa0101850 | Msa0285740 | 0.805047 | 1.611815e-49 | -8.615850e-47 |
| Msa0101850 | Msa0302660 | 0.810236 | 1.274644e-50 | -8.615850e-47 |
| Msa0101850 | Msa0304870 | 0.807155 | 5.801786e-50 | -8.615850e-47 |
| Msa0101850 | Msa0341260 | 0.805949 | 1.042717e-49 | -8.615850e-47 |
| Msa0101850 | Msa0362840 | 0.805380 | 1.373007e-49 | -8.615850e-47 |
| Msa0101850 | Msa0367370 | 0.828007 | 1.141879e-54 | -8.615850e-47 |
| Msa0101850 | Msa0379450 | 0.808498 | 3.006991e-50 | -8.615850e-47 |
| Msa0101850 | Msa0396970 | 0.800326 | 1.518935e-48 | -8.615850e-47 |
| Msa0101850 | Msa0399180 | 0.854686 | 1.043242e-61 | -8.615850e-47 |
| Msa0101850 | Msa0415050 | 0.819454 | 1.151842e-52 | -8.615850e-47 |
| Msa0101850 | Msa0415460 | 0.805192 | 1.502981e-49 | -8.615850e-47 |
| Msa0101850 | Msa0417630 | 0.806655 | 7.401246e-50 | -8.615850e-47 |
| Msa0101850 | Msa0436310 | 0.811726 | 6.060900e-51 | -8.615850e-47 |
| Msa0101850 | Msa0436450 | 0.827914 | 1.202403e-54 | -8.615850e-47 |
| Msa0101850 | Msa0439780 | 0.812176 | 4.835649e-51 | -8.615850e-47 |
| Msa0101850 | Msa0448160 | 0.808254 | 3.389455e-50 | -8.615850e-47 |
| Msa0101850 | Msa0476150 | 0.800445 | 1.436420e-48 | -8.615850e-47 |
| Msa0101850 | Msa0482960 | 0.814850 | 1.249048e-51 | -8.615850e-47 |
| Msa0101850 | Msa0485280 | 0.803319 | 3.689278e-49 | -8.615850e-47 |
| Msa0101850 | Msa0486200 | 0.813618 | 2.336852e-51 | -8.615850e-47 |
| Msa0101850 | Msa0504740 | 0.826388 | 2.787508e-54 | -8.615850e-47 |
| Msa0101850 | Msa0524090 | 0.804402 | 2.197478e-49 | -8.615850e-47 |
| Msa0101850 | Msa0526130 | 0.822002 | 2.989682e-53 | -8.615850e-47 |
| Msa0101850 | Msa0546740 | 0.820947 | 5.238403e-53 | -8.615850e-47 |
| Msa0101850 | Msa0555940 | 0.801804 | 7.574584e-49 | -8.615850e-47 |
| Msa0101850 | Msa0567290 | 0.819519 | 1.112902e-52 | -8.615850e-47 |
| Msa0101850 | Msa0600390 | 0.808587 | 2.878877e-50 | -8.615850e-47 |
| Msa0101850 | Msa0619330 | 0.815403 | 9.410753e-52 | -8.615850e-47 |
| Msa0101850 | Msa0620270 | 0.803479 | 3.419132e-49 | -8.615850e-47 |
| Msa0101850 | Msa0640880 | 0.822314 | 2.530691e-53 | -8.615850e-47 |
| Msa0101850 | Msa0667970 | 0.802722 | 4.901922e-49 | -8.615850e-47 |
| Msa0101850 | Msa0681890 | 0.815727 | 7.973328e-52 | -8.615850e-47 |
| Msa0101850 | Msa0685520 | 0.802609 | 5.173092e-49 | -8.615850e-47 |
| Msa0101850 | Msa0701320 | 0.803031 | 4.231682e-49 | -8.615850e-47 |
| Msa0101850 | Msa0703760 | 0.830407 | 2.989073e-55 | -8.615850e-47 |
| Msa0101850 | Msa0704990 | 0.803760 | 2.988855e-49 | -8.615850e-47 |
| Msa0101850 | Msa0705030 | 0.800016 | 1.756578e-48 | -8.615850e-47 |
| Msa0101850 | Msa0719340 | 0.802544 | 5.334504e-49 | -8.615850e-47 |
| Msa0101850 | Msa0732100 | 0.815588 | 8.559157e-52 | -8.615850e-47 |
| Msa0101850 | Msa0738970 | 0.800898 | 1.161070e-48 | -8.615850e-47 |
| Msa0101850 | Msa0772150 | 0.801267 | 9.762273e-49 | -8.615850e-47 |
| Msa0101850 | Msa0773080 | 0.806142 | 9.496233e-50 | -8.615850e-47 |
| Msa0101850 | Msa0803130 | 0.805654 | 1.202422e-49 | -8.615850e-47 |
| Msa0101850 | Msa0804110 | 0.825593 | 4.307877e-54 | -8.615850e-47 |
| Msa0101850 | Msa0810370 | 0.817770 | 2.775399e-52 | -8.615850e-47 |
| Msa0101850 | Msa0841490 | 0.800285 | 1.548305e-48 | -8.615850e-47 |
| Msa0101850 | Msa0859390 | 0.802824 | 4.671300e-49 | -8.615850e-47 |
| Msa0101850 | Msa0884730 | 0.821671 | 3.566080e-53 | -8.615850e-47 |
| Msa0101850 | Msa0893390 | 0.801154 | 1.029283e-48 | -8.615850e-47 |
| Msa0101850 | Msa0910650 | 0.811153 | 8.072336e-51 | -8.615850e-47 |
| Msa0101850 | Msa0930160 | 0.814444 | 1.535939e-51 | -8.615850e-47 |
| Msa0101850 | Msa0946650 | 0.813661 | 2.285663e-51 | -8.615850e-47 |
| Msa0101850 | Msa1002980 | 0.800288 | 1.546462e-48 | -8.615850e-47 |
| Msa0101850 | Msa1013510 | 0.800909 | 1.155410e-48 | -8.615850e-47 |
| Msa0101850 | Msa1027790 | 0.821119 | 4.783212e-53 | -8.615850e-47 |
| Msa0101850 | Msa1028460 | 0.807382 | 5.194252e-50 | -8.615850e-47 |
| Msa0101850 | Msa1033120 | 0.808305 | 3.305502e-50 | -8.615850e-47 |
| Msa0101850 | Msa1033960 | 0.800568 | 1.355615e-48 | -8.615850e-47 |
| Msa0101850 | Msa1035090 | 0.808216 | 3.453113e-50 | -8.615850e-47 |
| Msa0101850 | Msa1044040 | 0.809028 | 2.316423e-50 | -8.615850e-47 |
| Msa0101850 | Msa1045440 | 0.813027 | 3.150492e-51 | -8.615850e-47 |
| Msa0101850 | Msa1061310 | 0.801098 | 1.056873e-48 | -8.615850e-47 |
| Msa0101850 | Msa1067430 | 0.826802 | 2.221406e-54 | -8.615850e-47 |
| Msa0101850 | Msa1070900 | 0.807174 | 5.749250e-50 | -8.615850e-47 |
| Msa0101850 | Msa1080620 | 0.807188 | 5.710553e-50 | -8.615850e-47 |
| Msa0101850 | Msa1080690 | 0.818437 | 1.961452e-52 | -8.615850e-47 |
| Msa0101850 | Msa1084150 | 0.844984 | 5.389113e-59 | -8.615850e-47 |
| Msa0101850 | Msa1106580 | 0.816303 | 5.929006e-52 | -8.615850e-47 |
| Msa0101850 | Msa1112610 | 0.807334 | 5.317415e-50 | -8.615850e-47 |
| Msa0101850 | Msa1121630 | 0.800586 | 1.344573e-48 | -8.615850e-47 |
| Msa0101850 | Msa1126310 | 0.833198 | 6.119736e-56 | -8.615850e-47 |
| Msa0101850 | Msa1127510 | 0.838030 | 3.662851e-57 | -8.615850e-47 |
| Msa0101850 | Msa1132820 | 0.803317 | 3.693712e-49 | -8.615850e-47 |
| Msa0101850 | Msa1149960 | 0.819951 | 8.869385e-53 | -8.615850e-47 |
| Msa0101850 | Msa1166180 | 0.818949 | 1.500706e-52 | -8.615850e-47 |
| Msa0101850 | Msa1166280 | 0.813847 | 2.080449e-51 | -8.615850e-47 |
| Msa0101850 | Msa1167160 | 0.816824 | 4.531790e-52 | -8.615850e-47 |
| Msa0101850 | Msa1180410 | 0.809699 | 1.662734e-50 | -8.615850e-47 |
| Msa0101850 | Msa1183760 | 0.814763 | 1.305688e-51 | -8.615850e-47 |
| Msa0101850 | Msa1186210 | 0.802015 | 6.855122e-49 | -8.615850e-47 |
| Msa0101850 | Msa1189630 | 0.806886 | 6.614765e-50 | -8.615850e-47 |
| Msa0101850 | Msa1206440 | 0.802449 | 5.581175e-49 | -8.615850e-47 |
| Msa0101850 | Msa1208750 | 0.828717 | 7.695854e-55 | -8.615850e-47 |
| Msa0101850 | Msa1219250 | 0.849337 | 3.449680e-60 | -8.615850e-47 |
| Msa0101850 | Msa1232010 | 0.827609 | 1.423165e-54 | -8.615850e-47 |
| Msa0101850 | Msa1271600 | 0.807153 | 5.808917e-50 | -8.615850e-47 |
| Msa0101850 | Msa1274740 | 0.831449 | 1.659107e-55 | -8.615850e-47 |
| Msa0101850 | Msa1279700 | 0.820703 | 5.962067e-53 | -8.615850e-47 |
| Msa0101850 | Msa1293530 | 0.835185 | 1.944261e-56 | -8.615850e-47 |
| Msa0101850 | Msa1312730 | 0.840895 | 6.601571e-58 | -8.615850e-47 |
| Msa0101850 | Msa1315980 | 0.801411 | 9.119504e-49 | -8.615850e-47 |
| Msa0101850 | Msa1344430 | 0.803777 | 2.964974e-49 | -8.615850e-47 |
| Msa0101850 | Msa1354040 | 0.811609 | 6.427204e-51 | -8.615850e-47 |
| Msa0101850 | Msa1367810 | 0.815657 | 8.260856e-52 | -8.615850e-47 |
| Msa0101850 | Msa1375400 | 0.807912 | 4.008390e-50 | -8.615850e-47 |
| Msa0101850 | Msa1379980 | 0.838276 | 3.166435e-57 | -8.615850e-47 |
| Msa0101850 | Msa1398840 | 0.845558 | 3.769354e-59 | -8.615850e-47 |
| Msa0101850 | Msa1407710 | 0.805420 | 1.346718e-49 | -8.615850e-47 |
| Msa0101850 | Msa1410170 | 0.826929 | 2.071254e-54 | -8.615850e-47 |
| Msa0101850 | Msa1415250 | 0.827535 | 1.483001e-54 | -8.615850e-47 |
| Msa0101850 | Msa1416460 | 0.809439 | 1.891337e-50 | -8.615850e-47 |
| Msa0101850 | Msa1422490 | 0.802912 | 4.479326e-49 | -8.615850e-47 |
| Msa0101850 | Msa1424240 | 0.810460 | 1.139940e-50 | -8.615850e-47 |
| Msa0101850 | Msa1429390 | 0.817671 | 2.922464e-52 | -8.615850e-47 |
| Msa0101850 | Msa1437150 | 0.800262 | 1.565238e-48 | -8.615850e-47 |
| Msa0101850 | Msa1442030 | 0.801129 | 1.041570e-48 | -8.615850e-47 |
| Msa0101850 | Msa1449680 | 0.800013 | 1.758650e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101850 | MtrunA17_Chr1g0147931 | 96.360 | 467 | 17 | 0 | 1 | 467 | 119 | 585 | 0.0 | 937 |
| Msa0101850 | MtrunA17_Chr8g0392911 | 27.700 | 213 | 138 | 4 | 37 | 249 | 271 | 467 | 4.49e-17 | 84.0 |
| Msa0101850 | MtrunA17_Chr8g0392911 | 24.908 | 273 | 163 | 9 | 1 | 272 | 379 | 610 | 2.23e-13 | 72.4 |
| Msa0101850 | MtrunA17_Chr2g0296401 | 31.707 | 164 | 102 | 3 | 47 | 208 | 215 | 370 | 2.38e-15 | 79.0 |
| Msa0101850 | MtrunA17_Chr2g0296401 | 29.936 | 157 | 101 | 3 | 60 | 216 | 195 | 342 | 3.30e-13 | 72.0 |
| Msa0101850 | MtrunA17_Chr4g0060641 | 28.571 | 175 | 114 | 3 | 37 | 211 | 432 | 595 | 4.28e-15 | 78.2 |
| Msa0101850 | MtrunA17_Chr4g0060641 | 27.751 | 209 | 137 | 5 | 68 | 273 | 425 | 622 | 3.08e-14 | 75.5 |
| Msa0101850 | MtrunA17_Chr3g0136851 | 26.506 | 249 | 163 | 5 | 1 | 249 | 875 | 1103 | 1.73e-14 | 76.3 |
| Msa0101850 | MtrunA17_Chr3g0136851 | 27.797 | 295 | 180 | 11 | 1 | 291 | 279 | 544 | 2.18e-12 | 69.7 |
| Msa0101850 | MtrunA17_Chr7g0241721 | 25.506 | 247 | 156 | 6 | 37 | 279 | 28 | 250 | 8.01e-14 | 73.9 |
| Msa0101850 | MtrunA17_Chr4g0059671 | 27.143 | 210 | 136 | 5 | 36 | 244 | 178 | 371 | 8.56e-14 | 73.9 |
| Msa0101850 | MtrunA17_Chr1g0162741 | 27.179 | 195 | 125 | 5 | 1 | 194 | 253 | 431 | 9.77e-14 | 73.6 |
| Msa0101850 | MtrunA17_Chr4g0033981 | 27.358 | 212 | 126 | 6 | 34 | 243 | 436 | 621 | 1.01e-13 | 73.6 |
| Msa0101850 | MtrunA17_Chr4g0052491 | 27.600 | 250 | 154 | 8 | 37 | 283 | 223 | 448 | 1.19e-13 | 73.6 |
| Msa0101850 | MtrunA17_Chr1g0182521 | 26.159 | 302 | 161 | 11 | 37 | 301 | 313 | 589 | 2.12e-13 | 72.8 |
| Msa0101850 | MtrunA17_Chr6g0482651 | 30.047 | 213 | 121 | 7 | 37 | 246 | 130 | 317 | 3.58e-13 | 71.6 |
| Msa0101850 | MtrunA17_Chr6g0482561 | 23.834 | 193 | 134 | 4 | 47 | 239 | 160 | 339 | 7.05e-13 | 70.1 |
| Msa0101850 | MtrunA17_Chr3g0116201 | 24.651 | 215 | 146 | 4 | 37 | 251 | 188 | 386 | 8.78e-13 | 70.1 |
| Msa0101850 | MtrunA17_Chr6g0482901 | 29.577 | 213 | 122 | 7 | 37 | 246 | 144 | 331 | 9.77e-13 | 70.1 |
| Msa0101850 | MtrunA17_Chr6g0482571 | 24.631 | 203 | 137 | 5 | 37 | 239 | 171 | 357 | 1.38e-12 | 69.3 |
| Msa0101850 | MtrunA17_Chr6g0482571 | 24.883 | 213 | 144 | 4 | 37 | 249 | 136 | 332 | 1.09e-11 | 66.6 |
| Msa0101850 | MtrunA17_Chr6g0481431 | 25.263 | 190 | 129 | 4 | 47 | 236 | 23 | 199 | 1.42e-12 | 67.8 |
| Msa0101850 | MtrunA17_Chr6g0482821 | 23.316 | 193 | 135 | 4 | 47 | 239 | 324 | 503 | 1.57e-12 | 69.7 |
| Msa0101850 | MtrunA17_Chr6g0482921 | 22.041 | 245 | 173 | 5 | 47 | 291 | 58 | 284 | 1.58e-12 | 68.2 |
| Msa0101850 | MtrunA17_Chr7g0241871 | 26.446 | 242 | 152 | 7 | 1 | 239 | 173 | 391 | 1.60e-12 | 69.7 |
| Msa0101850 | MtrunA17_Chr7g0241871 | 24.390 | 205 | 141 | 4 | 35 | 238 | 94 | 285 | 3.61e-11 | 65.5 |
| Msa0101850 | MtrunA17_Chr1g0211881 | 29.651 | 172 | 110 | 3 | 37 | 208 | 321 | 481 | 1.84e-12 | 69.3 |
| Msa0101850 | MtrunA17_Chr6g0477341 | 26.163 | 172 | 114 | 4 | 68 | 239 | 401 | 559 | 1.95e-12 | 69.3 |
| Msa0101850 | MtrunA17_Chr6g0477341 | 24.380 | 242 | 161 | 6 | 37 | 273 | 338 | 562 | 4.19e-12 | 68.6 |
| Msa0101850 | MtrunA17_Chr6g0482601 | 24.044 | 183 | 126 | 4 | 57 | 239 | 243 | 412 | 2.13e-12 | 68.9 |
| Msa0101850 | MtrunA17_Chr8g0390501 | 25.306 | 245 | 160 | 8 | 1 | 242 | 87 | 311 | 2.22e-12 | 69.3 |
| Msa0101850 | MtrunA17_Chr2g0282801 | 29.064 | 203 | 128 | 6 | 1 | 202 | 94 | 281 | 2.27e-12 | 68.9 |
| Msa0101850 | MtrunA17_Chr5g0412071 | 26.971 | 241 | 154 | 7 | 10 | 249 | 313 | 532 | 2.32e-12 | 69.3 |
| Msa0101850 | MtrunA17_Chr8g0334641 | 27.228 | 202 | 127 | 6 | 37 | 236 | 240 | 423 | 2.36e-12 | 68.9 |
| Msa0101850 | MtrunA17_Chr6g0481751 | 23.305 | 236 | 163 | 6 | 48 | 283 | 241 | 458 | 2.50e-12 | 68.6 |
| Msa0101850 | MtrunA17_Chr6g0481621 | 25.532 | 188 | 116 | 5 | 37 | 218 | 301 | 470 | 2.53e-12 | 68.9 |
| Msa0101850 | MtrunA17_Chr6g0482751 | 22.348 | 264 | 184 | 7 | 28 | 291 | 304 | 546 | 3.24e-12 | 68.6 |
| Msa0101850 | MtrunA17_Chr6g0482541 | 24.352 | 193 | 133 | 4 | 47 | 239 | 160 | 339 | 3.68e-12 | 67.8 |
| Msa0101850 | MtrunA17_Chr2g0331911 | 27.488 | 211 | 138 | 5 | 1 | 211 | 416 | 611 | 4.36e-12 | 68.6 |
| Msa0101850 | MtrunA17_Chr6g0481601 | 28.571 | 168 | 99 | 4 | 57 | 218 | 318 | 470 | 4.49e-12 | 68.2 |
| Msa0101850 | MtrunA17_Chr4g0039041 | 23.970 | 267 | 181 | 6 | 9 | 274 | 481 | 726 | 4.91e-12 | 68.6 |
| Msa0101850 | MtrunA17_Chr6g0478291 | 25.824 | 182 | 123 | 4 | 37 | 218 | 280 | 449 | 6.68e-12 | 67.8 |
| Msa0101850 | MtrunA17_Chr6g0481971 | 26.289 | 194 | 128 | 5 | 47 | 239 | 314 | 493 | 9.22e-12 | 67.0 |
| Msa0101850 | MtrunA17_Chr1g0168761 | 27.014 | 211 | 127 | 5 | 7 | 211 | 239 | 428 | 9.87e-12 | 67.0 |
| Msa0101850 | MtrunA17_Chr3g0143411 | 22.424 | 165 | 119 | 2 | 44 | 208 | 153 | 308 | 1.04e-11 | 67.0 |
| Msa0101850 | MtrunA17_Chr8g0359781 | 29.310 | 174 | 107 | 5 | 51 | 215 | 119 | 285 | 1.11e-11 | 66.6 |
| Msa0101850 | MtrunA17_Chr6g0482611 | 23.005 | 213 | 148 | 4 | 37 | 249 | 284 | 480 | 1.24e-11 | 66.6 |
| Msa0101850 | MtrunA17_Chr3g0133151 | 27.841 | 176 | 108 | 6 | 68 | 239 | 198 | 358 | 1.82e-11 | 66.2 |
| Msa0101850 | MtrunA17_Chr3g0102961 | 23.000 | 200 | 138 | 5 | 37 | 236 | 320 | 503 | 2.41e-11 | 65.9 |
| Msa0101850 | MtrunA17_Chr6g0481981 | 23.316 | 193 | 135 | 4 | 47 | 239 | 225 | 404 | 2.46e-11 | 65.5 |
| Msa0101850 | MtrunA17_Chr6g0481981 | 24.272 | 206 | 128 | 5 | 37 | 236 | 183 | 366 | 4.30e-11 | 64.7 |
| Msa0101850 | MtrunA17_Chr2g0292711 | 26.286 | 175 | 116 | 4 | 45 | 217 | 441 | 604 | 2.75e-11 | 65.9 |
| Msa0101850 | MtrunA17_Chr5g0446031 | 28.272 | 191 | 123 | 5 | 26 | 216 | 549 | 725 | 2.83e-11 | 65.9 |
| Msa0101850 | MtrunA17_Chr6g0478011 | 25.275 | 182 | 124 | 4 | 37 | 218 | 92 | 261 | 3.62e-11 | 64.3 |
| Msa0101850 | MtrunA17_Chr6g0481991 | 24.123 | 228 | 158 | 5 | 13 | 239 | 317 | 530 | 3.76e-11 | 65.5 |
| Msa0101850 | MtrunA17_Chr1g0210801 | 26.168 | 214 | 130 | 8 | 30 | 237 | 206 | 397 | 4.84e-11 | 65.1 |
| Msa0101850 | MtrunA17_Chr6g0458411 | 27.941 | 204 | 125 | 5 | 37 | 237 | 310 | 494 | 5.61e-11 | 64.7 |
| Msa0101850 | MtrunA17_Chr5g0416631 | 25.000 | 180 | 122 | 3 | 57 | 236 | 142 | 308 | 5.88e-11 | 65.1 |
| Msa0101850 | MtrunA17_Chr4g0037841 | 26.761 | 213 | 135 | 6 | 27 | 236 | 198 | 392 | 6.27e-11 | 64.7 |
| Msa0101850 | MtrunA17_Chr6g0471481 | 25.110 | 227 | 129 | 6 | 7 | 208 | 73 | 283 | 7.13e-11 | 63.2 |
| Msa0101850 | MtrunA17_Chr6g0482801 | 24.599 | 187 | 119 | 4 | 63 | 249 | 4 | 168 | 8.57e-11 | 60.8 |
| Msa0101850 | MtrunA17_Chr7g0220501 | 27.222 | 180 | 107 | 6 | 34 | 209 | 257 | 416 | 8.65e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101850 | AT5G10690.1 | 60.265 | 453 | 180 | 0 | 1 | 453 | 122 | 574 | 0.0 | 568 |
| Msa0101850 | AT5G10690.2 | 60.265 | 453 | 180 | 0 | 1 | 453 | 122 | 574 | 0.0 | 568 |
| Msa0101850 | AT5G01110.1 | 26.923 | 234 | 144 | 5 | 14 | 236 | 347 | 564 | 2.43e-16 | 82.4 |
| Msa0101850 | AT5G01110.1 | 25.688 | 218 | 146 | 6 | 1 | 217 | 524 | 726 | 2.64e-12 | 69.7 |
| Msa0101850 | AT5G01110.1 | 23.944 | 213 | 146 | 5 | 37 | 249 | 241 | 437 | 1.51e-11 | 67.4 |
| Msa0101850 | AT5G01110.2 | 26.923 | 234 | 144 | 5 | 14 | 236 | 375 | 592 | 2.72e-16 | 82.0 |
| Msa0101850 | AT5G01110.2 | 25.688 | 218 | 146 | 6 | 1 | 217 | 552 | 754 | 2.56e-12 | 69.7 |
| Msa0101850 | AT5G01110.2 | 23.944 | 213 | 146 | 5 | 37 | 249 | 269 | 465 | 1.49e-11 | 67.4 |
| Msa0101850 | AT1G64580.1 | 24.911 | 281 | 166 | 7 | 1 | 251 | 228 | 493 | 1.16e-15 | 79.7 |
| Msa0101850 | AT1G09680.1 | 26.821 | 302 | 182 | 9 | 1 | 286 | 284 | 562 | 1.23e-15 | 79.7 |
| Msa0101850 | AT1G09900.1 | 27.200 | 250 | 155 | 9 | 1 | 246 | 283 | 509 | 1.51e-15 | 79.7 |
| Msa0101850 | AT1G74850.1 | 30.337 | 178 | 110 | 4 | 68 | 244 | 210 | 374 | 2.71e-15 | 79.3 |
| Msa0101850 | AT1G63070.1 | 26.609 | 233 | 146 | 7 | 7 | 236 | 300 | 510 | 3.03e-14 | 75.5 |
| Msa0101850 | AT1G79490.1 | 24.696 | 247 | 165 | 6 | 37 | 283 | 249 | 474 | 3.49e-14 | 75.5 |
| Msa0101850 | AT1G12775.1 | 28.571 | 210 | 135 | 5 | 1 | 210 | 307 | 501 | 5.10e-14 | 74.7 |
| Msa0101850 | AT1G62720.1 | 25.100 | 251 | 159 | 6 | 4 | 251 | 256 | 480 | 8.50e-14 | 73.9 |
| Msa0101850 | AT4G31850.1 | 26.271 | 236 | 156 | 5 | 1 | 236 | 864 | 1081 | 8.72e-14 | 74.7 |
| Msa0101850 | AT1G63130.1 | 27.076 | 277 | 168 | 9 | 7 | 270 | 306 | 561 | 9.30e-14 | 73.9 |
| Msa0101850 | AT1G63130.2 | 27.076 | 277 | 168 | 9 | 7 | 270 | 306 | 561 | 9.30e-14 | 73.9 |
| Msa0101850 | AT2G36240.1 | 28.431 | 204 | 133 | 6 | 2 | 201 | 123 | 317 | 1.04e-13 | 73.6 |
| Msa0101850 | AT1G62670.2 | 27.953 | 254 | 152 | 8 | 32 | 270 | 324 | 561 | 1.04e-13 | 73.9 |
| Msa0101850 | AT1G62670.2 | 26.230 | 183 | 122 | 3 | 69 | 251 | 396 | 565 | 9.19e-11 | 64.7 |
| Msa0101850 | AT1G62670.1 | 27.953 | 254 | 152 | 8 | 32 | 270 | 324 | 561 | 1.04e-13 | 73.9 |
| Msa0101850 | AT1G62670.1 | 26.230 | 183 | 122 | 3 | 69 | 251 | 396 | 565 | 9.19e-11 | 64.7 |
| Msa0101850 | AT5G02860.1 | 27.907 | 215 | 119 | 8 | 64 | 249 | 309 | 516 | 1.44e-13 | 73.6 |
| Msa0101850 | AT5G02860.4 | 27.907 | 215 | 119 | 8 | 64 | 249 | 309 | 516 | 1.44e-13 | 73.6 |
| Msa0101850 | AT5G02860.2 | 27.907 | 215 | 119 | 8 | 64 | 249 | 309 | 516 | 1.44e-13 | 73.6 |
| Msa0101850 | AT5G02860.5 | 27.907 | 215 | 119 | 8 | 64 | 249 | 309 | 516 | 1.44e-13 | 73.6 |
| Msa0101850 | AT5G02860.3 | 27.907 | 215 | 119 | 8 | 64 | 249 | 309 | 516 | 1.44e-13 | 73.6 |
| Msa0101850 | AT1G62914.1 | 25.854 | 205 | 136 | 4 | 36 | 240 | 328 | 516 | 3.27e-13 | 72.0 |
| Msa0101850 | AT1G63400.1 | 26.122 | 245 | 153 | 7 | 36 | 268 | 335 | 563 | 3.46e-13 | 72.0 |
| Msa0101850 | AT3G59040.1 | 27.879 | 165 | 111 | 2 | 45 | 209 | 325 | 481 | 4.20e-13 | 72.0 |
| Msa0101850 | AT5G12100.1 | 28.077 | 260 | 151 | 9 | 1 | 254 | 468 | 697 | 5.03e-13 | 72.0 |
| Msa0101850 | AT3G09060.2 | 25.616 | 203 | 136 | 3 | 37 | 239 | 120 | 307 | 5.21e-13 | 71.6 |
| Msa0101850 | AT3G09060.1 | 25.616 | 203 | 136 | 3 | 37 | 239 | 120 | 307 | 5.21e-13 | 71.6 |
| Msa0101850 | AT3G54980.1 | 26.442 | 208 | 138 | 4 | 1 | 208 | 628 | 820 | 7.47e-13 | 71.6 |
| Msa0101850 | AT3G54980.2 | 26.442 | 208 | 138 | 4 | 1 | 208 | 628 | 820 | 7.47e-13 | 71.6 |
| Msa0101850 | AT3G59040.2 | 27.879 | 165 | 111 | 2 | 45 | 209 | 332 | 488 | 8.22e-13 | 70.9 |
| Msa0101850 | AT5G39710.1 | 26.070 | 257 | 165 | 9 | 1 | 252 | 249 | 485 | 1.00e-12 | 70.9 |
| Msa0101850 | AT3G22470.1 | 27.014 | 211 | 137 | 5 | 1 | 210 | 289 | 483 | 1.03e-12 | 70.9 |
| Msa0101850 | AT3G16010.1 | 28.750 | 160 | 94 | 4 | 2 | 158 | 489 | 631 | 1.06e-12 | 70.9 |
| Msa0101850 | AT1G03560.1 | 25.946 | 185 | 121 | 5 | 32 | 213 | 327 | 498 | 1.34e-12 | 70.5 |
| Msa0101850 | AT1G74580.2 | 26.000 | 200 | 132 | 4 | 37 | 236 | 222 | 405 | 1.94e-12 | 70.1 |
| Msa0101850 | AT1G74580.1 | 26.000 | 200 | 132 | 4 | 37 | 236 | 222 | 405 | 1.94e-12 | 70.1 |
| Msa0101850 | AT1G74580.3 | 26.000 | 200 | 132 | 4 | 37 | 236 | 222 | 405 | 1.94e-12 | 70.1 |
| Msa0101850 | AT5G14770.2 | 25.862 | 232 | 149 | 6 | 27 | 253 | 643 | 856 | 2.15e-12 | 70.1 |
| Msa0101850 | AT5G14770.5 | 25.862 | 232 | 149 | 6 | 27 | 253 | 643 | 856 | 2.15e-12 | 70.1 |
| Msa0101850 | AT5G14770.4 | 25.862 | 232 | 149 | 6 | 27 | 253 | 643 | 856 | 2.15e-12 | 70.1 |
| Msa0101850 | AT5G14770.1 | 25.862 | 232 | 149 | 6 | 27 | 253 | 643 | 856 | 2.15e-12 | 70.1 |
| Msa0101850 | AT5G14770.3 | 25.862 | 232 | 149 | 6 | 27 | 253 | 643 | 856 | 2.15e-12 | 70.1 |
| Msa0101850 | AT1G62930.1 | 27.076 | 277 | 168 | 9 | 7 | 270 | 305 | 560 | 2.19e-12 | 69.7 |
| Msa0101850 | AT1G22960.1 | 29.167 | 192 | 119 | 6 | 61 | 249 | 400 | 577 | 2.38e-12 | 69.7 |
| Msa0101850 | AT1G22960.1 | 24.051 | 237 | 147 | 5 | 37 | 249 | 279 | 506 | 9.46e-11 | 64.7 |
| Msa0101850 | AT1G22960.2 | 29.167 | 192 | 119 | 6 | 61 | 249 | 400 | 577 | 2.38e-12 | 69.7 |
| Msa0101850 | AT1G22960.2 | 24.051 | 237 | 147 | 5 | 37 | 249 | 279 | 506 | 9.46e-11 | 64.7 |
| Msa0101850 | AT1G52620.1 | 29.310 | 174 | 104 | 5 | 69 | 239 | 345 | 502 | 2.61e-12 | 69.7 |
| Msa0101850 | AT1G62680.1 | 26.047 | 215 | 137 | 5 | 37 | 248 | 301 | 496 | 2.72e-12 | 69.3 |
| Msa0101850 | AT1G62680.2 | 26.047 | 215 | 137 | 5 | 37 | 248 | 301 | 496 | 2.72e-12 | 69.3 |
| Msa0101850 | AT5G65560.1 | 26.642 | 274 | 175 | 10 | 5 | 273 | 336 | 588 | 2.89e-12 | 69.7 |
| Msa0101850 | AT5G65560.1 | 23.701 | 308 | 206 | 10 | 28 | 329 | 176 | 460 | 1.99e-11 | 67.0 |
| Msa0101850 | AT5G65560.2 | 26.642 | 274 | 175 | 10 | 5 | 273 | 336 | 588 | 2.89e-12 | 69.7 |
| Msa0101850 | AT5G65560.2 | 23.701 | 308 | 206 | 10 | 28 | 329 | 176 | 460 | 1.99e-11 | 67.0 |
| Msa0101850 | AT5G65560.3 | 26.642 | 274 | 175 | 10 | 5 | 273 | 336 | 588 | 2.89e-12 | 69.7 |
| Msa0101850 | AT5G65560.3 | 23.701 | 308 | 206 | 10 | 28 | 329 | 176 | 460 | 1.99e-11 | 67.0 |
| Msa0101850 | AT3G13160.1 | 27.805 | 205 | 125 | 6 | 69 | 268 | 177 | 363 | 3.80e-12 | 68.2 |
| Msa0101850 | AT1G62590.2 | 26.471 | 204 | 134 | 4 | 36 | 239 | 335 | 522 | 4.07e-12 | 68.9 |
| Msa0101850 | AT1G62590.2 | 27.545 | 167 | 108 | 3 | 69 | 235 | 400 | 553 | 3.06e-11 | 66.2 |
| Msa0101850 | AT1G62590.2 | 26.570 | 207 | 137 | 5 | 2 | 208 | 270 | 461 | 7.04e-11 | 65.1 |
| Msa0101850 | AT1G62590.1 | 26.471 | 204 | 134 | 4 | 36 | 239 | 335 | 522 | 4.07e-12 | 68.9 |
| Msa0101850 | AT1G62590.1 | 27.545 | 167 | 108 | 3 | 69 | 235 | 400 | 553 | 3.06e-11 | 66.2 |
| Msa0101850 | AT1G62590.1 | 26.570 | 207 | 137 | 5 | 2 | 208 | 270 | 461 | 7.04e-11 | 65.1 |
| Msa0101850 | AT4G26680.2 | 26.818 | 220 | 143 | 5 | 72 | 291 | 276 | 477 | 4.08e-12 | 68.6 |
| Msa0101850 | AT4G26680.1 | 26.818 | 220 | 143 | 5 | 72 | 291 | 276 | 477 | 4.08e-12 | 68.6 |
| Msa0101850 | AT3G18110.1 | 26.705 | 176 | 98 | 4 | 72 | 217 | 263 | 437 | 4.76e-12 | 68.9 |
| Msa0101850 | AT1G63230.1 | 26.923 | 182 | 122 | 3 | 36 | 217 | 151 | 321 | 6.75e-12 | 67.0 |
| Msa0101850 | AT1G13630.3 | 26.437 | 174 | 114 | 3 | 1 | 174 | 316 | 475 | 8.31e-12 | 68.2 |
| Msa0101850 | AT1G13630.6 | 26.437 | 174 | 114 | 3 | 1 | 174 | 279 | 438 | 1.08e-11 | 67.4 |
| Msa0101850 | AT5G61400.1 | 24.893 | 233 | 137 | 5 | 33 | 236 | 305 | 528 | 1.11e-11 | 67.4 |
| Msa0101850 | AT5G41170.3 | 30.114 | 176 | 112 | 3 | 36 | 211 | 152 | 316 | 1.24e-11 | 67.0 |
| Msa0101850 | AT1G13630.4 | 26.437 | 174 | 114 | 3 | 1 | 174 | 454 | 613 | 1.34e-11 | 67.4 |
| Msa0101850 | AT5G61990.1 | 24.611 | 321 | 159 | 11 | 1 | 275 | 601 | 884 | 1.38e-11 | 67.4 |
| Msa0101850 | AT1G13630.5 | 26.437 | 174 | 114 | 3 | 1 | 174 | 441 | 600 | 1.49e-11 | 67.4 |
| Msa0101850 | AT1G13630.2 | 26.437 | 174 | 114 | 3 | 1 | 174 | 449 | 608 | 1.51e-11 | 67.4 |
| Msa0101850 | AT5G41170.1 | 30.114 | 176 | 112 | 3 | 36 | 211 | 252 | 416 | 1.75e-11 | 66.6 |
| Msa0101850 | AT2G31400.2 | 24.348 | 230 | 139 | 5 | 68 | 268 | 408 | 631 | 1.79e-11 | 67.0 |
| Msa0101850 | AT2G31400.1 | 24.348 | 230 | 139 | 5 | 68 | 268 | 408 | 631 | 1.95e-11 | 67.0 |
| Msa0101850 | AT1G13040.2 | 27.500 | 200 | 129 | 4 | 37 | 236 | 261 | 444 | 1.98e-11 | 66.6 |
| Msa0101850 | AT1G13040.1 | 27.500 | 200 | 129 | 4 | 37 | 236 | 261 | 444 | 1.98e-11 | 66.6 |
| Msa0101850 | AT3G53700.1 | 24.171 | 211 | 142 | 5 | 1 | 209 | 268 | 462 | 2.05e-11 | 66.6 |
| Msa0101850 | AT1G13630.1 | 26.437 | 174 | 114 | 3 | 1 | 174 | 407 | 566 | 2.09e-11 | 67.0 |
| Msa0101850 | AT1G62910.1 | 26.697 | 221 | 140 | 6 | 1 | 218 | 267 | 468 | 2.10e-11 | 66.6 |
| Msa0101850 | AT5G41170.2 | 30.114 | 176 | 112 | 3 | 36 | 211 | 252 | 416 | 2.20e-11 | 66.2 |
| Msa0101850 | AT5G42310.1 | 26.244 | 221 | 142 | 6 | 1 | 215 | 278 | 483 | 2.56e-11 | 66.6 |
| Msa0101850 | AT5G46100.1 | 28.311 | 219 | 140 | 6 | 1 | 218 | 95 | 297 | 3.02e-11 | 65.9 |
| Msa0101850 | AT5G55840.2 | 28.019 | 207 | 131 | 6 | 46 | 248 | 312 | 504 | 3.53e-11 | 66.2 |
| Msa0101850 | AT5G55840.1 | 28.019 | 207 | 131 | 6 | 46 | 248 | 312 | 504 | 3.53e-11 | 66.2 |
| Msa0101850 | AT5G64320.1 | 24.457 | 184 | 126 | 3 | 68 | 251 | 423 | 593 | 3.72e-11 | 65.9 |
| Msa0101850 | AT5G55840.3 | 28.019 | 207 | 131 | 6 | 46 | 248 | 272 | 464 | 4.54e-11 | 65.9 |
| Msa0101850 | AT2G41720.1 | 25.444 | 169 | 115 | 3 | 71 | 239 | 180 | 337 | 5.71e-11 | 65.5 |
| Msa0101850 | AT2G41720.3 | 25.444 | 169 | 115 | 3 | 71 | 239 | 180 | 337 | 5.84e-11 | 65.5 |
| Msa0101850 | AT1G63330.3 | 26.946 | 167 | 109 | 3 | 69 | 235 | 325 | 478 | 5.86e-11 | 65.1 |
| Msa0101850 | AT1G63330.1 | 26.946 | 167 | 109 | 3 | 69 | 235 | 325 | 478 | 5.86e-11 | 65.1 |
| Msa0101850 | AT1G63330.2 | 26.946 | 167 | 109 | 3 | 69 | 235 | 325 | 478 | 5.86e-11 | 65.1 |
| Msa0101850 | AT2G02150.1 | 25.743 | 202 | 134 | 5 | 36 | 237 | 232 | 417 | 7.69e-11 | 65.1 |
| Msa0101850 | AT2G02150.2 | 25.743 | 202 | 134 | 5 | 36 | 237 | 232 | 417 | 7.69e-11 | 65.1 |
| Msa0101850 | AT2G41720.2 | 25.444 | 169 | 115 | 3 | 71 | 239 | 48 | 205 | 8.90e-11 | 64.7 |
Find 120 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCACATCCTTCAGCTTTA+TGG | 0.088937 | 1_3:-8501859 | None:intergenic |
| CTAAAATGTGGCTCAGTTAA+AGG | 0.174702 | 1_3:+8499950 | Msa0101850:CDS |
| TCATGTAATTGATTTAATTT+TGG | 0.186516 | 1_3:+8502348 | Msa0101850:CDS |
| TTCTCGTATTGAGGCCTTAT+TGG | 0.188977 | 1_3:+8501443 | Msa0101850:CDS |
| TCTCTTTATTTGCAGGGTTT+GGG | 0.203176 | 1_3:+8499821 | Msa0101850:intron |
| GATGTTGCCATGCAATTATT+TGG | 0.260218 | 1_3:+8499327 | Msa0101850:CDS |
| ATAATACCTGGCCAGCGTTC+AGG | 0.288132 | 1_3:-8500848 | None:intergenic |
| AATGGCCTCCTTGCCTGTTA+TGG | 0.294395 | 1_3:+8498993 | Msa0101850:CDS |
| TTTAAATTTATAAAGGGTTT+AGG | 0.297675 | 1_3:+8498467 | None:intergenic |
| AGGTCTGTCTCTTTCACTTC+AGG | 0.301705 | 1_3:-8502490 | None:intergenic |
| GTCTCTTTCACTTCAGGTGC+AGG | 0.310158 | 1_3:-8502484 | None:intergenic |
| TTGCTTGAATCTGTCGAAAA+TGG | 0.316041 | 1_3:+8498521 | Msa0101850:CDS |
| TCTCGTATTGAGGCCTTATT+GGG | 0.317110 | 1_3:+8501444 | Msa0101850:CDS |
| GAAGGTGGTCAGCTTCTTCT+TGG | 0.327463 | 1_3:-8500812 | None:intergenic |
| AGTATACAACCTTCTAATAA+AGG | 0.328017 | 1_3:+8499052 | Msa0101850:CDS |
| AGAAGTAAACCTTTATTAGA+AGG | 0.343566 | 1_3:-8499061 | None:intergenic |
| TCAGCTTCTTCTTGGGAAAC+TGG | 0.369690 | 1_3:-8500804 | None:intergenic |
| TTGTCAGCACCATTGGTCTT+TGG | 0.370073 | 1_3:+8498566 | Msa0101850:CDS |
| TGAAACACCATGGAAACTAT+TGG | 0.371568 | 1_3:-8502609 | None:intergenic |
| ATGTTGCCATGCAATTATTT+GGG | 0.377718 | 1_3:+8499328 | Msa0101850:CDS |
| ACGAAGCACGGAACCATAAC+AGG | 0.384680 | 1_3:-8499006 | None:intergenic |
| AGAAGCTGACCACCTTCTAA+TGG | 0.395651 | 1_3:+8500818 | Msa0101850:CDS |
| AGTACCAAACTTCTCTCGTT+TGG | 0.395870 | 1_3:+8502674 | Msa0101850:three_prime_UTR |
| TCAGGGCTGCTTCCATTAGA+AGG | 0.396733 | 1_3:-8500830 | None:intergenic |
| CTAAACATGTTATATTACTA+TGG | 0.398270 | 1_3:-8502526 | None:intergenic |
| TTCACCTTCTGAACCGGTTG+AGG | 0.399630 | 1_3:+8501794 | Msa0101850:CDS |
| ATAATTGAAGAGAAACAAAA+AGG | 0.400814 | 1_3:-8502745 | None:intergenic |
| TTACATTAGAACAATTGAAT+AGG | 0.402924 | 1_3:+8502452 | Msa0101850:CDS |
| AAGATTGTTCCTGAAGTATC+TGG | 0.404575 | 1_3:-8500780 | None:intergenic |
| TCAGGTTTCACCTTCTGAAC+CGG | 0.408469 | 1_3:+8501788 | Msa0101850:intron |
| GATGAGTGGGGCAGTTGTAC+AGG | 0.408510 | 1_3:+8501918 | Msa0101850:CDS |
| GTTGTGTATGTAACGATATC+TGG | 0.410768 | 1_3:-8499482 | None:intergenic |
| CAATCCTTTCTTACTTCCTC+AGG | 0.413532 | 1_3:+8501485 | Msa0101850:CDS |
| GTGTTATATGTGAGCCTGTC+AGG | 0.415560 | 1_3:-8499270 | None:intergenic |
| CAAGATGGAAGGGCATATCT+TGG | 0.424966 | 1_3:+8500990 | Msa0101850:CDS |
| AATTTACAATGATAACCATT+AGG | 0.425061 | 1_3:-8502381 | None:intergenic |
| CTGCCCCACTCATCTACAAT+AGG | 0.426731 | 1_3:-8501909 | None:intergenic |
| TTGTCCAAACGAGAGAAGTT+TGG | 0.426912 | 1_3:-8502678 | None:intergenic |
| GCAATTATTTGGGGAAATGA+AGG | 0.427781 | 1_3:+8499338 | Msa0101850:CDS |
| AGCATGTTTATTGCAGTATG+AGG | 0.427855 | 1_3:-8499219 | None:intergenic |
| TTATTTGCAGGGTTTGGGGC+AGG | 0.430752 | 1_3:+8499826 | Msa0101850:intron |
| TTTGGAGAAGGGTTACCTAA+TGG | 0.434463 | 1_3:+8502366 | Msa0101850:CDS |
| GGAGACCTGCGTCGTGCAAA+TGG | 0.442030 | 1_3:+8498975 | Msa0101850:intron |
| AGCAGCCCTGAACGCTGGCC+AGG | 0.442752 | 1_3:+8500842 | Msa0101850:CDS |
| AGATGCTGAGAATCCCAATA+AGG | 0.445424 | 1_3:-8501457 | None:intergenic |
| TAATACCTGGCCAGCGTTCA+GGG | 0.449125 | 1_3:-8500847 | None:intergenic |
| TTCAGTTATGCAAATAGTGC+TGG | 0.453662 | 1_3:+8499862 | Msa0101850:CDS |
| AGAAGCAAAGGCACGCATCA+TGG | 0.454416 | 1_3:-8500712 | None:intergenic |
| TCCAAAGTTGTCAGCACCAT+TGG | 0.459587 | 1_3:+8498559 | Msa0101850:CDS |
| ATACCTGATTGCAGTCTTCA+CGG | 0.459732 | 1_3:-8501950 | None:intergenic |
| CTCTTTATTTGCAGGGTTTG+GGG | 0.460659 | 1_3:+8499822 | Msa0101850:intron |
| TGCAGGGTTTGGGGCAGGCA+AGG | 0.462186 | 1_3:+8499831 | Msa0101850:intron |
| ACCAATGGTGCTGACAACTT+TGG | 0.463056 | 1_3:-8498560 | None:intergenic |
| AAGGTGGTCAGCTTCTTCTT+GGG | 0.465281 | 1_3:-8500811 | None:intergenic |
| CTTCTCATCATTGTTGAAAG+TGG | 0.468936 | 1_3:-8502289 | None:intergenic |
| AGTAATATAACATGTTTAGT+TGG | 0.479207 | 1_3:+8502530 | Msa0101850:exon |
| GCAGGGTTTGGGGCAGGCAA+GGG | 0.480626 | 1_3:+8499832 | Msa0101850:intron |
| TGAGGCTTCGGTCTCAACTC+TGG | 0.482708 | 1_3:-8500678 | None:intergenic |
| CTAAATGCCTTAGCAGAAGC+AGG | 0.483292 | 1_3:+8498593 | Msa0101850:CDS |
| TTAGGTTGCTTCTCGTATTG+AGG | 0.492333 | 1_3:+8501434 | Msa0101850:intron |
| GACATCATGAAACCCTCAAC+CGG | 0.493018 | 1_3:-8501807 | None:intergenic |
| AAATACAGAAACAGGTTGGT+TGG | 0.498251 | 1_3:+8500652 | Msa0101850:CDS |
| TCACCTTCTGAACCGGTTGA+GGG | 0.500243 | 1_3:+8501795 | Msa0101850:CDS |
| CATTTCCCCAAATAATTGCA+TGG | 0.511780 | 1_3:-8499334 | None:intergenic |
| ATCAAGGAATAATGCCTGAC+AGG | 0.514559 | 1_3:+8499256 | Msa0101850:CDS |
| ACACCGTGAAGACTGCAATC+AGG | 0.518070 | 1_3:+8501947 | Msa0101850:CDS |
| AGTACCTGAGGAAGTAAGAA+AGG | 0.519933 | 1_3:-8501489 | None:intergenic |
| GTATATTGTTTCAAGATGGA+AGG | 0.520854 | 1_3:+8500979 | Msa0101850:CDS |
| TTCTAGAGGAGATTATGATC+TGG | 0.521453 | 1_3:+8500731 | Msa0101850:CDS |
| GACTCGTATGCTACTTCATA+CGG | 0.525717 | 1_3:+8502409 | Msa0101850:CDS |
| AGCTTTATGGTACCTTGTAG+TGG | 0.528748 | 1_3:-8501846 | None:intergenic |
| CAACTCACCTGCTTCTGCTA+AGG | 0.528939 | 1_3:-8498600 | None:intergenic |
| GAAAGATAGAGATGAGGCTT+CGG | 0.529644 | 1_3:-8500690 | None:intergenic |
| TTATGTATATTGTTTCAAGA+TGG | 0.531921 | 1_3:+8500975 | Msa0101850:CDS |
| GGCATATCTTGGACGAGTCA+TGG | 0.532942 | 1_3:+8501001 | Msa0101850:CDS |
| AAGAGAGAGTTAGTGAAGAG+AGG | 0.533305 | 1_3:+8502640 | Msa0101850:three_prime_UTR |
| TATATTGTTTCAAGATGGAA+GGG | 0.539141 | 1_3:+8500980 | Msa0101850:CDS |
| AGATGTTGAAGCTGTAACAC+TGG | 0.539184 | 1_3:-8502320 | None:intergenic |
| TTCTTTAAGTTGAAACACCA+TGG | 0.541027 | 1_3:-8502619 | None:intergenic |
| TACCATAAAGCTGAAGGATG+TGG | 0.545197 | 1_3:+8501857 | Msa0101850:CDS |
| ATTTATAAAGGGTTTAGGCA+AGG | 0.549418 | 1_3:+8498472 | None:intergenic |
| AGTTCCTATTGTAGATGAGT+GGG | 0.551954 | 1_3:+8501905 | Msa0101850:CDS |
| GGAGAAATACAGAAACAGGT+TGG | 0.562601 | 1_3:+8500648 | Msa0101850:CDS |
| GTTGATGCTTTACTAAAATG+TGG | 0.563108 | 1_3:+8499938 | Msa0101850:CDS |
| ATAATCTCCTCTAGAAGCAA+AGG | 0.563776 | 1_3:-8500724 | None:intergenic |
| ACTATGGTCTGCAGAGTGAA+AGG | 0.571848 | 1_3:-8502510 | None:intergenic |
| ATGTTCGCCTTCACGAAGCA+CGG | 0.574322 | 1_3:-8499018 | None:intergenic |
| TATGGTTCCGTGCTTCGTGA+AGG | 0.575619 | 1_3:+8499011 | Msa0101850:CDS |
| AAACCCTCAACCGGTTCAGA+AGG | 0.579685 | 1_3:-8501798 | None:intergenic |
| ATGCGTGCCTTTGCTTCTAG+AGG | 0.581476 | 1_3:+8500717 | Msa0101850:CDS |
| TGTCGAAAATGGTACTGCCG+TGG | 0.581683 | 1_3:+8498532 | Msa0101850:CDS |
| TAGTTCCTATTGTAGATGAG+TGG | 0.581776 | 1_3:+8501904 | Msa0101850:CDS |
| TCATACGGCTGTAGAGCAGT+TGG | 0.582194 | 1_3:+8502424 | Msa0101850:CDS |
| GGAGGCCATTTGCACGACGC+AGG | 0.591746 | 1_3:-8498980 | None:intergenic |
| GTTACAGCTTCAACATCTGT+TGG | 0.591905 | 1_3:+8502325 | Msa0101850:CDS |
| ATGGAAGCAGCCCTGAACGC+TGG | 0.592021 | 1_3:+8500837 | Msa0101850:CDS |
| GTCGAAAATGGTACTGCCGT+GGG | 0.593460 | 1_3:+8498533 | Msa0101850:CDS |
| AAAGCAACACGGCCACTACA+AGG | 0.595532 | 1_3:+8501834 | Msa0101850:CDS |
| ATGTGTTCAGAGTGAAAAGT+TGG | 0.598519 | 1_3:+8499305 | Msa0101850:CDS |
| ATGAGTGGGGCAGTTGTACA+GGG | 0.608082 | 1_3:+8501919 | Msa0101850:CDS |
| GAAGCTGTAACACTGGGAGG+AGG | 0.610682 | 1_3:-8502313 | None:intergenic |
| ACAAGGTACCATAAAGCTGA+AGG | 0.615792 | 1_3:+8501851 | Msa0101850:CDS |
| ATTTAGGGGCATATAAACTC+AGG | 0.617242 | 1_3:+8499192 | Msa0101850:intron |
| TACATACACAACATTGCTCA+AGG | 0.622162 | 1_3:+8499493 | Msa0101850:CDS |
| TGTTGCCATGCAATTATTTG+GGG | 0.622414 | 1_3:+8499329 | Msa0101850:CDS |
| GATGTTGAAGCTGTAACACT+GGG | 0.624035 | 1_3:-8502319 | None:intergenic |
| GCACGGAACCATAACAGGCA+AGG | 0.625395 | 1_3:-8499001 | None:intergenic |
| GCATAAGTATGAATTTGTAG+TGG | 0.632099 | 1_3:-8502817 | None:intergenic |
| TTGGACGAGTCATGGAGGCA+TGG | 0.639562 | 1_3:+8501009 | Msa0101850:CDS |
| TTTAGTAAACCAAAGACCAA+TGG | 0.639879 | 1_3:-8498575 | None:intergenic |
| GGGCTGCTTCCATTAGAAGG+TGG | 0.643430 | 1_3:-8500827 | None:intergenic |
| TATCTGGAAACAGATCATCA+TGG | 0.649083 | 1_3:-8499466 | None:intergenic |
| TGACAACTTTGGACTTCCCA+CGG | 0.656849 | 1_3:-8498549 | None:intergenic |
| CGGAACCATAACAGGCAAGG+AGG | 0.674149 | 1_3:-8498998 | None:intergenic |
| TGATGTCATTTAAAGCAACA+CGG | 0.676814 | 1_3:+8501823 | Msa0101850:CDS |
| ATCATGGAAAGATAGAGATG+AGG | 0.679599 | 1_3:-8500696 | None:intergenic |
| GTTCCTATTGTAGATGAGTG+GGG | 0.696190 | 1_3:+8501906 | Msa0101850:CDS |
| GTTGAAGCTGTAACACTGGG+AGG | 0.703547 | 1_3:-8502316 | None:intergenic |
| AGAAATGCAGAAGATTGACG+TGG | 0.704033 | 1_3:+8502772 | Msa0101850:three_prime_UTR |
| ATATCTTGGACGAGTCATGG+AGG | 0.748915 | 1_3:+8501004 | Msa0101850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACTTGATTTAAATTTTAA+TGG | - | chr1_3:8499571-8499590 | None:intergenic | 10.0% |
| !!! | TTGTTTAAAATAAATGTTAA+AGG | - | chr1_3:8499730-8499749 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATTTTTTTGACT+TGG | + | chr1_3:8501232-8501251 | Msa0101850:intron | 10.0% |
| !!! | CTAAATAAAATTTTACATTT+TGG | - | chr1_3:8502558-8502577 | None:intergenic | 10.0% |
| !!! | AAATGTAAAATTTTATTTAG+TGG | + | chr1_3:8502558-8502577 | Msa0101850:three_prime_UTR | 10.0% |
| !!! | TATTAAATGTTTTTCATTTC+TGG | + | chr1_3:8498687-8498706 | Msa0101850:intron | 15.0% |
| !!! | ATTAAATGTTTTTCATTTCT+GGG | + | chr1_3:8498688-8498707 | Msa0101850:intron | 15.0% |
| !!! | TATAACTTTTAATAGTTTTG+TGG | + | chr1_3:8499380-8499399 | Msa0101850:intron | 15.0% |
| !! | ATTAAAAGGATAAATGTTTA+TGG | + | chr1_3:8500029-8500048 | Msa0101850:intron | 15.0% |
| !!! | ACAAATTTAAAGTTTTAACT+TGG | - | chr1_3:8500379-8500398 | None:intergenic | 15.0% |
| !! | AAGTTAAAACTTTAAATTTG+TGG | + | chr1_3:8500378-8500397 | Msa0101850:intron | 15.0% |
| !! | AGTTAAAACTTTAAATTTGT+GGG | + | chr1_3:8500379-8500398 | Msa0101850:intron | 15.0% |
| !! | ATCATATAATTGAATTATCT+TGG | + | chr1_3:8500599-8500618 | Msa0101850:intron | 15.0% |
| !! | TCATATAATTGAATTATCTT+GGG | + | chr1_3:8500600-8500619 | Msa0101850:intron | 15.0% |
| !!! | TAATTTTCAACATTTTGATT+GGG | + | chr1_3:8500886-8500905 | Msa0101850:intron | 15.0% |
| !!! | TTCTTATCACATTAATTTTT+AGG | + | chr1_3:8501122-8501141 | Msa0101850:intron | 15.0% |
| !!! | TCATGTAATTGATTTAATTT+TGG | + | chr1_3:8502348-8502367 | Msa0101850:CDS | 15.0% |
| !!! | ATTTTTTTTCCCACTAATTT+AGG | + | chr1_3:8499176-8499195 | Msa0101850:intron | 20.0% |
| !!! | TTTTTTTTCCCACTAATTTA+GGG | + | chr1_3:8499177-8499196 | Msa0101850:intron | 20.0% |
| !! | AATTCCAACCTTTATATTAT+AGG | + | chr1_3:8499424-8499443 | Msa0101850:intron | 20.0% |
| !!! | TTTTCCTATAATATAAAGGT+TGG | - | chr1_3:8499431-8499450 | None:intergenic | 20.0% |
| !!! | TCCTCTATTATAATTTTATC+AGG | + | chr1_3:8499761-8499780 | Msa0101850:intron | 20.0% |
| !!! | CCTCTATTATAATTTTATCA+GGG | + | chr1_3:8499762-8499781 | Msa0101850:intron | 20.0% |
| !!! | CTCTATTATAATTTTATCAG+GGG | + | chr1_3:8499763-8499782 | Msa0101850:intron | 20.0% |
| !! | TAGTTTCAGGAATAATTAAA+AGG | + | chr1_3:8500015-8500034 | Msa0101850:intron | 20.0% |
| !! | ACCAATTATTTAGTTAGAAA+TGG | + | chr1_3:8500261-8500280 | Msa0101850:intron | 20.0% |
| !! | TCCATTTCTAACTAAATAAT+TGG | - | chr1_3:8500265-8500284 | None:intergenic | 20.0% |
| !!! | ATGGATAATAGTTTAACTTT+TGG | + | chr1_3:8500280-8500299 | Msa0101850:intron | 20.0% |
| !! | TACTCAATTAAACATAGTAA+AGG | + | chr1_3:8500421-8500440 | Msa0101850:intron | 20.0% |
| !! | AATTAAACATAGTAAAGGAA+TGG | + | chr1_3:8500426-8500445 | Msa0101850:intron | 20.0% |
| !! | CAATTAGTTAATGAAACAAA+AGG | - | chr1_3:8500560-8500579 | None:intergenic | 20.0% |
| !! | CATATAATTGAATTATCTTG+GGG | + | chr1_3:8500601-8500620 | Msa0101850:intron | 20.0% |
| !! | ACAGAAATATTAATAATACC+TGG | - | chr1_3:8500863-8500882 | None:intergenic | 20.0% |
| !!! | CTAATTTTCAACATTTTGAT+TGG | + | chr1_3:8500885-8500904 | Msa0101850:intron | 20.0% |
| !! | TTATGTATATTGTTTCAAGA+TGG | + | chr1_3:8500975-8500994 | Msa0101850:CDS | 20.0% |
| !! | ATACTTAAAAGTCTACTAAA+TGG | - | chr1_3:8501075-8501094 | None:intergenic | 20.0% |
| !!! | TTAGCATTGATTTATATATC+TGG | + | chr1_3:8501094-8501113 | Msa0101850:intron | 20.0% |
| !!! | AATTGATTTAATTTTGGAGA+AGG | + | chr1_3:8502354-8502373 | Msa0101850:CDS | 20.0% |
| !!! | ATTGATTTAATTTTGGAGAA+GGG | + | chr1_3:8502355-8502374 | Msa0101850:CDS | 20.0% |
| !! | AATTTACAATGATAACCATT+AGG | - | chr1_3:8502384-8502403 | None:intergenic | 20.0% |
| !! | TTACATTAGAACAATTGAAT+AGG | + | chr1_3:8502452-8502471 | Msa0101850:CDS | 20.0% |
| !! | CTAAACATGTTATATTACTA+TGG | - | chr1_3:8502529-8502548 | None:intergenic | 20.0% |
| !! | AGTAATATAACATGTTTAGT+TGG | + | chr1_3:8502530-8502549 | Msa0101850:exon | 20.0% |
| !! | ATAATTGAAGAGAAACAAAA+AGG | - | chr1_3:8502748-8502767 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTCTCTTCAATTA+TGG | + | chr1_3:8502747-8502766 | Msa0101850:three_prime_UTR | 20.0% |
| !!! | TTTTGTTTCTCTTCAATTAT+GGG | + | chr1_3:8502748-8502767 | Msa0101850:three_prime_UTR | 20.0% |
| ! | TGCAAAAACAAAAATTGATC+AGG | - | chr1_3:8498771-8498790 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTTTGCATTGCA+TGG | + | chr1_3:8498776-8498795 | Msa0101850:intron | 25.0% |
| ! | TTGTTTGCTTTCAATGTTTA+AGG | + | chr1_3:8498861-8498880 | Msa0101850:intron | 25.0% |
| ! | AGTATACAACCTTCTAATAA+AGG | + | chr1_3:8499052-8499071 | Msa0101850:CDS | 25.0% |
| ! | AGAAGTAAACCTTTATTAGA+AGG | - | chr1_3:8499064-8499083 | None:intergenic | 25.0% |
| !! | ATAATGAAATTTTCTCCCTA+AGG | - | chr1_3:8499090-8499109 | None:intergenic | 25.0% |
| ! | TAACCATTCAAATTATTGCT+CGG | - | chr1_3:8499157-8499176 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCCACTAATTTAG+GGG | + | chr1_3:8499178-8499197 | Msa0101850:intron | 25.0% |
| !! | CTCAATGAAATTTTACATCA+AGG | + | chr1_3:8499240-8499259 | Msa0101850:CDS | 25.0% |
| ! | TATAAAGGTTGGAATTTAGA+AGG | - | chr1_3:8499420-8499439 | None:intergenic | 25.0% |
| !!! | CGCTTTTTCCTATAATATAA+AGG | - | chr1_3:8499435-8499454 | None:intergenic | 25.0% |
| ! | CCCTGATAAAATTATAATAG+AGG | - | chr1_3:8499765-8499784 | None:intergenic | 25.0% |
| !! | TATAATTTTATCAGGGGTTT+AGG | + | chr1_3:8499769-8499788 | Msa0101850:intron | 25.0% |
| !!! | AGTTTTTCTCTTTATTTGCA+GGG | + | chr1_3:8499815-8499834 | Msa0101850:intron | 25.0% |
| !!! | GATATTCCACCTTTTTTTTT+TGG | + | chr1_3:8500064-8500083 | Msa0101850:intron | 25.0% |
| ! | TTTGATTATTAGCACTTGTT+AGG | - | chr1_3:8500109-8500128 | None:intergenic | 25.0% |
| ! | TGATAAAACTTTCAGTTAAG+TGG | + | chr1_3:8500337-8500356 | Msa0101850:intron | 25.0% |
| !!! | TAAAGTTTTAACTTGGTACT+TGG | - | chr1_3:8500372-8500391 | None:intergenic | 25.0% |
| !! | ATTTTCTAATGAAGCTTGAA+TGG | + | chr1_3:8500482-8500501 | Msa0101850:intron | 25.0% |
| ! | TATATTGTTTCAAGATGGAA+GGG | + | chr1_3:8500980-8500999 | Msa0101850:CDS | 25.0% |
| !!! | CATTAATTTTTAGGATCAAC+TGG | + | chr1_3:8501131-8501150 | Msa0101850:intron | 25.0% |
| ! | TTCTAAGTATAATATTACCG+TGG | + | chr1_3:8501269-8501288 | Msa0101850:intron | 25.0% |
| ! | ACAGTATTAAATGTAATCCA+CGG | - | chr1_3:8501289-8501308 | None:intergenic | 25.0% |
| ! | TTATATATGTTAAGTACCTG+AGG | - | chr1_3:8501504-8501523 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGCATTGCATTTT+TGG | + | chr1_3:8501707-8501726 | Msa0101850:intron | 25.0% |
| ! | TAGAACACTATTTCATCAAA+CGG | - | chr1_3:8501990-8502009 | None:intergenic | 25.0% |
| ! | GAATTCATCATAGTATTAGA+TGG | - | chr1_3:8502251-8502270 | None:intergenic | 25.0% |
| ! | AAAAAAACCAATAGTTTCCA+TGG | + | chr1_3:8502602-8502621 | Msa0101850:three_prime_UTR | 25.0% |
| ! | TGTGAAGAGAGAATAAAAAT+AGG | + | chr1_3:8502710-8502729 | Msa0101850:three_prime_UTR | 25.0% |
| ! | AAGAGAGAATAAAAATAGGT+GGG | + | chr1_3:8502714-8502733 | Msa0101850:three_prime_UTR | 25.0% |
| TTTAGTAAACCAAAGACCAA+TGG | - | chr1_3:8498578-8498597 | None:intergenic | 30.0% | |
| !! | TTTTCATTTCTGGGAATTTC+TGG | + | chr1_3:8498697-8498716 | Msa0101850:intron | 30.0% |
| AAAGTAATGTACACTTAGCA+AGG | - | chr1_3:8498723-8498742 | None:intergenic | 30.0% | |
| CATTAAAAAGTCATGTTGAC+TGG | + | chr1_3:8498923-8498942 | Msa0101850:intron | 30.0% | |
| CATATTTCAGTAGTAGAGAT+TGG | + | chr1_3:8499116-8499135 | Msa0101850:intron | 30.0% | |
| TTATATGCCCCTAAATTAGT+GGG | - | chr1_3:8499188-8499207 | None:intergenic | 30.0% | |
| TTTATATGCCCCTAAATTAG+TGG | - | chr1_3:8499189-8499208 | None:intergenic | 30.0% | |
| ATGTTGCCATGCAATTATTT+GGG | + | chr1_3:8499328-8499347 | Msa0101850:CDS | 30.0% | |
| !! | AGTTTTGTGGTAGATAAATC+TGG | + | chr1_3:8499393-8499412 | Msa0101850:intron | 30.0% |
| ! | TATATTATAGGAAAAAGCGC+AGG | + | chr1_3:8499436-8499455 | Msa0101850:intron | 30.0% |
| !!! | CTGTATAACGTTTTGATTGT+TGG | + | chr1_3:8499600-8499619 | Msa0101850:intron | 30.0% |
| TAAGCAGTCATGTATGAAAA+TGG | + | chr1_3:8499700-8499719 | Msa0101850:intron | 30.0% | |
| !! | CAGTTTTTCTCTTTATTTGC+AGG | + | chr1_3:8499814-8499833 | Msa0101850:intron | 30.0% |
| GTTGATGCTTTACTAAAATG+TGG | + | chr1_3:8499938-8499957 | Msa0101850:CDS | 30.0% | |
| GGATAAATGTTTATGGTAGT+TGG | + | chr1_3:8500036-8500055 | Msa0101850:intron | 30.0% | |
| !!! | TTCCACCTTTTTTTTTTGGA+TGG | + | chr1_3:8500068-8500087 | Msa0101850:intron | 30.0% |
| !!! | TCCACCTTTTTTTTTTGGAT+GGG | + | chr1_3:8500069-8500088 | Msa0101850:intron | 30.0% |
| AAACTTTAAATTTGTGGGTG+TGG | + | chr1_3:8500384-8500403 | Msa0101850:intron | 30.0% | |
| TGAATTATCTTGGGGTATAT+AGG | + | chr1_3:8500609-8500628 | Msa0101850:intron | 30.0% | |
| !! | TTTTGGAGAAATACAGAAAC+AGG | + | chr1_3:8500644-8500663 | Msa0101850:CDS | 30.0% |
| TGGTTAAAAACTTGCATAAG+CGG | + | chr1_3:8500751-8500770 | Msa0101850:CDS | 30.0% | |
| !!! | TTTCAACATTTTGATTGGGA+CGG | + | chr1_3:8500890-8500909 | Msa0101850:intron | 30.0% |
| GTATATTGTTTCAAGATGGA+AGG | + | chr1_3:8500979-8500998 | Msa0101850:CDS | 30.0% | |
| !! | GGTACTTCAGTTGATATTTT+TGG | + | chr1_3:8501152-8501171 | Msa0101850:intron | 30.0% |
| GGAATCTTTGCATTGTAAAA+AGG | - | chr1_3:8501181-8501200 | None:intergenic | 30.0% | |
| ACTTACTACTGGACAATATT+TGG | - | chr1_3:8501314-8501333 | None:intergenic | 30.0% | |
| TCATTTCCCTTAAAATGCTA+AGG | + | chr1_3:8501365-8501384 | Msa0101850:intron | 30.0% | |
| !!! | ACAGTAGTTTTAGACAAACT+AGG | - | chr1_3:8501618-8501637 | None:intergenic | 30.0% |
| ! | TGATGTCATTTAAAGCAACA+CGG | + | chr1_3:8501823-8501842 | Msa0101850:CDS | 30.0% |
| TATAGTCTTTAAGTCAGACA+TGG | + | chr1_3:8502028-8502047 | Msa0101850:intron | 30.0% | |
| TTTGACAAAGCATGAACAAA+CGG | - | chr1_3:8502104-8502123 | None:intergenic | 30.0% | |
| CGTATTGTCAATTTCTGATT+CGG | + | chr1_3:8502218-8502237 | Msa0101850:intron | 30.0% | |
| TCATAGTATTAGATGGTTAG+AGG | - | chr1_3:8502244-8502263 | None:intergenic | 30.0% | |
| !! | TTCTTTAAGTTGAAACACCA+TGG | - | chr1_3:8502622-8502641 | None:intergenic | 30.0% |
| GAAGAGAGAATAAAAATAGG+TGG | + | chr1_3:8502713-8502732 | Msa0101850:three_prime_UTR | 30.0% | |
| ATTGAAGAGAAACAAAAAGG+TGG | - | chr1_3:8502745-8502764 | None:intergenic | 30.0% | |
| TTGCTTGAATCTGTCGAAAA+TGG | + | chr1_3:8498521-8498540 | Msa0101850:CDS | 35.0% | |
| ! | AAGGTGTTAGATGTATGTTC+TGG | + | chr1_3:8498880-8498899 | Msa0101850:intron | 35.0% |
| AAGGTTTACTTCTGAACCTT+AGG | + | chr1_3:8499071-8499090 | Msa0101850:intron | 35.0% | |
| AGGTTTACTTCTGAACCTTA+GGG | + | chr1_3:8499072-8499091 | Msa0101850:intron | 35.0% | |
| GATCCGAGCAATAATTTGAA+TGG | + | chr1_3:8499151-8499170 | Msa0101850:intron | 35.0% | |
| ! | ATTTAGGGGCATATAAACTC+AGG | + | chr1_3:8499192-8499211 | Msa0101850:intron | 35.0% |
| AGCATGTTTATTGCAGTATG+AGG | - | chr1_3:8499222-8499241 | None:intergenic | 35.0% | |
| ATGTGTTCAGAGTGAAAAGT+TGG | + | chr1_3:8499305-8499324 | Msa0101850:CDS | 35.0% | |
| GATGTTGCCATGCAATTATT+TGG | + | chr1_3:8499327-8499346 | Msa0101850:CDS | 35.0% | |
| TGTTGCCATGCAATTATTTG+GGG | + | chr1_3:8499329-8499348 | Msa0101850:CDS | 35.0% | |
| CATTTCCCCAAATAATTGCA+TGG | - | chr1_3:8499337-8499356 | None:intergenic | 35.0% | |
| GCAATTATTTGGGGAAATGA+AGG | + | chr1_3:8499338-8499357 | Msa0101850:CDS | 35.0% | |
| TATCTGGAAACAGATCATCA+TGG | - | chr1_3:8499469-8499488 | None:intergenic | 35.0% | |
| GTTGTGTATGTAACGATATC+TGG | - | chr1_3:8499485-8499504 | None:intergenic | 35.0% | |
| TACATACACAACATTGCTCA+AGG | + | chr1_3:8499493-8499512 | Msa0101850:CDS | 35.0% | |
| GAAATGAGTGAACATAACTC+CGG | - | chr1_3:8499629-8499648 | None:intergenic | 35.0% | |
| ! | AATTTTATCAGGGGTTTAGG+AGG | + | chr1_3:8499772-8499791 | Msa0101850:intron | 35.0% |
| ! | ATTTTATCAGGGGTTTAGGA+GGG | + | chr1_3:8499773-8499792 | Msa0101850:intron | 35.0% |
| ! | TTCTCTTTATTTGCAGGGTT+TGG | + | chr1_3:8499820-8499839 | Msa0101850:intron | 35.0% |
| ! | TCTCTTTATTTGCAGGGTTT+GGG | + | chr1_3:8499821-8499840 | Msa0101850:intron | 35.0% |
| TTCAGTTATGCAAATAGTGC+TGG | + | chr1_3:8499862-8499881 | Msa0101850:CDS | 35.0% | |
| CTAAAATGTGGCTCAGTTAA+AGG | + | chr1_3:8499950-8499969 | Msa0101850:CDS | 35.0% | |
| GGTATGCTTTCATTTGATTC+CGG | + | chr1_3:8499971-8499990 | Msa0101850:intron | 35.0% | |
| TCCAAGCAACTAAAGAAAAC+CGG | - | chr1_3:8499993-8500012 | None:intergenic | 35.0% | |
| ACCCATCCAAAAAAAAAAGG+TGG | - | chr1_3:8500073-8500092 | None:intergenic | 35.0% | |
| !!! | ACCTTTTTTTTTTGGATGGG+TGG | + | chr1_3:8500072-8500091 | Msa0101850:intron | 35.0% |
| TCCACCCATCCAAAAAAAAA+AGG | - | chr1_3:8500076-8500095 | None:intergenic | 35.0% | |
| TACCTGTCTCTTGAATTGAA+GGG | + | chr1_3:8500152-8500171 | Msa0101850:intron | 35.0% | |
| ACATAACCTTTCAGCAAACA+CGG | - | chr1_3:8500306-8500325 | None:intergenic | 35.0% | |
| CTGAAAGGTTATGTCTCATA+AGG | + | chr1_3:8500312-8500331 | Msa0101850:intron | 35.0% | |
| ! | ATAGGTGCTCTGTGTATTTT+TGG | + | chr1_3:8500627-8500646 | Msa0101850:intron | 35.0% |
| !! | AAATACAGAAACAGGTTGGT+TGG | + | chr1_3:8500652-8500671 | Msa0101850:CDS | 35.0% |
| ATCATGGAAAGATAGAGATG+AGG | - | chr1_3:8500699-8500718 | None:intergenic | 35.0% | |
| ! | ATAATCTCCTCTAGAAGCAA+AGG | - | chr1_3:8500727-8500746 | None:intergenic | 35.0% |
| ! | TTCTAGAGGAGATTATGATC+TGG | + | chr1_3:8500731-8500750 | Msa0101850:CDS | 35.0% |
| ! | AAGATTGTTCCTGAAGTATC+TGG | - | chr1_3:8500783-8500802 | None:intergenic | 35.0% |
| !!! | TTCAACATTTTGATTGGGAC+GGG | + | chr1_3:8500891-8500910 | Msa0101850:intron | 35.0% |
| AAGATTCCTTTGCAGAGAAT+CGG | + | chr1_3:8501193-8501212 | Msa0101850:intron | 35.0% | |
| ! | TAAAAACCGATTCTCTGCAA+AGG | - | chr1_3:8501202-8501221 | None:intergenic | 35.0% |
| CTTGTTCAGAAACTTACTAC+TGG | - | chr1_3:8501325-8501344 | None:intergenic | 35.0% | |
| AAGTTTCTGAACAAGCTGTT+AGG | + | chr1_3:8501330-8501349 | Msa0101850:intron | 35.0% | |
| ! | AACCTAAATTACAGAAGCAC+AGG | - | chr1_3:8501421-8501440 | None:intergenic | 35.0% |
| AATGCAGAAAAAACAGCCAA+AGG | - | chr1_3:8501700-8501719 | None:intergenic | 35.0% | |
| !! | AGTCTTATTATGCAACCTCA+TGG | + | chr1_3:8501764-8501783 | Msa0101850:intron | 35.0% |
| TAGTTCCTATTGTAGATGAG+TGG | + | chr1_3:8501904-8501923 | Msa0101850:CDS | 35.0% | |
| AGTTCCTATTGTAGATGAGT+GGG | + | chr1_3:8501905-8501924 | Msa0101850:CDS | 35.0% | |
| AATGCATGTACTTTCTGTCT+TGG | + | chr1_3:8502066-8502085 | Msa0101850:intron | 35.0% | |
| ATGCATGTACTTTCTGTCTT+GGG | + | chr1_3:8502067-8502086 | Msa0101850:intron | 35.0% | |
| TTGACAAAGCATGAACAAAC+GGG | - | chr1_3:8502103-8502122 | None:intergenic | 35.0% | |
| TGATGAATTCATTCTGCAGT+TGG | + | chr1_3:8502261-8502280 | Msa0101850:intron | 35.0% | |
| CTTCTCATCATTGTTGAAAG+TGG | - | chr1_3:8502292-8502311 | None:intergenic | 35.0% | |
| TGAAACACCATGGAAACTAT+TGG | - | chr1_3:8502612-8502631 | None:intergenic | 35.0% | |
| AAGAGAAACAAAAAGGTGGT+GGG | - | chr1_3:8502741-8502760 | None:intergenic | 35.0% | |
| TACTTGCAATGCTATAGTGC+AGG | + | chr1_3:8498954-8498973 | Msa0101850:intron | 40.0% | |
| ATCAAGGAATAATGCCTGAC+AGG | + | chr1_3:8499256-8499275 | Msa0101850:CDS | 40.0% | |
| !!! | ACGTTTTGATTGTTGGAGTC+CGG | + | chr1_3:8499607-8499626 | Msa0101850:intron | 40.0% |
| ! | CTCTTTATTTGCAGGGTTTG+GGG | + | chr1_3:8499822-8499841 | Msa0101850:intron | 40.0% |
| ! | TCCGGTTTTCTTTAGTTGCT+TGG | + | chr1_3:8499989-8500008 | Msa0101850:intron | 40.0% |
| AGTTGCTTGGAGATAGTTTC+AGG | + | chr1_3:8500002-8500021 | Msa0101850:intron | 40.0% | |
| CTACCTGTCTCTTGAATTGA+AGG | + | chr1_3:8500151-8500170 | Msa0101850:intron | 40.0% | |
| AACTTGGTACTTGGTTCAAC+TGG | - | chr1_3:8500363-8500382 | None:intergenic | 40.0% | |
| GGAGAAATACAGAAACAGGT+TGG | + | chr1_3:8500648-8500667 | Msa0101850:CDS | 40.0% | |
| GAAAGATAGAGATGAGGCTT+CGG | - | chr1_3:8500693-8500712 | None:intergenic | 40.0% | |
| !!! | TCAACATTTTGATTGGGACG+GGG | + | chr1_3:8500892-8500911 | Msa0101850:intron | 40.0% |
| ! | TGCTCTTGACATTTTATCCC+AGG | + | chr1_3:8500931-8500950 | Msa0101850:intron | 40.0% |
| TTTAGTAGCGACATCAACCT+GGG | - | chr1_3:8500951-8500970 | None:intergenic | 40.0% | |
| ! | TTTTAGTAGCGACATCAACC+TGG | - | chr1_3:8500952-8500971 | None:intergenic | 40.0% |
| TTCCCTTAAAATGCTAAGGC+TGG | + | chr1_3:8501369-8501388 | Msa0101850:intron | 40.0% | |
| ! | TGCCAGCCTTAGCATTTTAA+GGG | - | chr1_3:8501374-8501393 | None:intergenic | 40.0% |
| TGCCTGTGCTTCTGTAATTT+AGG | + | chr1_3:8501416-8501435 | Msa0101850:intron | 40.0% | |
| ! | TTAGGTTGCTTCTCGTATTG+AGG | + | chr1_3:8501434-8501453 | Msa0101850:intron | 40.0% |
| ! | TTCTCGTATTGAGGCCTTAT+TGG | + | chr1_3:8501443-8501462 | Msa0101850:CDS | 40.0% |
| !! | TCTCGTATTGAGGCCTTATT+GGG | + | chr1_3:8501444-8501463 | Msa0101850:CDS | 40.0% |
| AGATGCTGAGAATCCCAATA+AGG | - | chr1_3:8501460-8501479 | None:intergenic | 40.0% | |
| CAATCCTTTCTTACTTCCTC+AGG | + | chr1_3:8501485-8501504 | Msa0101850:CDS | 40.0% | |
| AGTACCTGAGGAAGTAAGAA+AGG | - | chr1_3:8501492-8501511 | None:intergenic | 40.0% | |
| ! | TCACTGACATCCTTTTCTCT+AGG | + | chr1_3:8501529-8501548 | Msa0101850:intron | 40.0% |
| ! | GTCTAAAACTACTGTCTTGC+AGG | + | chr1_3:8501623-8501642 | Msa0101850:intron | 40.0% |
| ATTATGCAACCTCATGGTTC+AGG | + | chr1_3:8501770-8501789 | Msa0101850:intron | 40.0% | |
| ! | AGCTTTATGGTACCTTGTAG+TGG | - | chr1_3:8501849-8501868 | None:intergenic | 40.0% |
| ! | ACAAGGTACCATAAAGCTGA+AGG | + | chr1_3:8501851-8501870 | Msa0101850:CDS | 40.0% |
| TACCATAAAGCTGAAGGATG+TGG | + | chr1_3:8501857-8501876 | Msa0101850:CDS | 40.0% | |
| GTTCCTATTGTAGATGAGTG+GGG | + | chr1_3:8501906-8501925 | Msa0101850:CDS | 40.0% | |
| ATACCTGATTGCAGTCTTCA+CGG | - | chr1_3:8501953-8501972 | None:intergenic | 40.0% | |
| GATGTTGAAGCTGTAACACT+GGG | - | chr1_3:8502322-8502341 | None:intergenic | 40.0% | |
| AGATGTTGAAGCTGTAACAC+TGG | - | chr1_3:8502323-8502342 | None:intergenic | 40.0% | |
| GTTACAGCTTCAACATCTGT+TGG | + | chr1_3:8502325-8502344 | Msa0101850:CDS | 40.0% | |
| TTTGGAGAAGGGTTACCTAA+TGG | + | chr1_3:8502366-8502385 | Msa0101850:CDS | 40.0% | |
| ! | GACTCGTATGCTACTTCATA+CGG | + | chr1_3:8502409-8502428 | Msa0101850:CDS | 40.0% |
| AAGAGAGAGTTAGTGAAGAG+AGG | + | chr1_3:8502640-8502659 | Msa0101850:three_prime_UTR | 40.0% | |
| AGTACCAAACTTCTCTCGTT+TGG | + | chr1_3:8502674-8502693 | Msa0101850:three_prime_UTR | 40.0% | |
| TTGTCCAAACGAGAGAAGTT+TGG | - | chr1_3:8502681-8502700 | None:intergenic | 40.0% | |
| AGAGAAACAAAAAGGTGGTG+GGG | - | chr1_3:8502740-8502759 | None:intergenic | 40.0% | |
| GAAGAGAAACAAAAAGGTGG+TGG | - | chr1_3:8502742-8502761 | None:intergenic | 40.0% | |
| AGAAATGCAGAAGATTGACG+TGG | + | chr1_3:8502772-8502791 | Msa0101850:three_prime_UTR | 40.0% | |
| TGACAACTTTGGACTTCCCA+CGG | - | chr1_3:8498552-8498571 | None:intergenic | 45.0% | |
| TCCAAAGTTGTCAGCACCAT+TGG | + | chr1_3:8498559-8498578 | Msa0101850:CDS | 45.0% | |
| !! | ACCAATGGTGCTGACAACTT+TGG | - | chr1_3:8498563-8498582 | None:intergenic | 45.0% |
| !! | TTGTCAGCACCATTGGTCTT+TGG | + | chr1_3:8498566-8498585 | Msa0101850:CDS | 45.0% |
| CTAAATGCCTTAGCAGAAGC+AGG | + | chr1_3:8498593-8498612 | Msa0101850:CDS | 45.0% | |
| CAAACAGCAAAGATCCGACA+GGG | - | chr1_3:8498652-8498671 | None:intergenic | 45.0% | |
| ACAAACAGCAAAGATCCGAC+AGG | - | chr1_3:8498653-8498672 | None:intergenic | 45.0% | |
| GTGTTATATGTGAGCCTGTC+AGG | - | chr1_3:8499273-8499292 | None:intergenic | 45.0% | |
| CACCCTTCAATTCAAGAGAC+AGG | - | chr1_3:8500157-8500176 | None:intergenic | 45.0% | |
| !! | TTTTGGCCGTGTTTGCTGAA+AGG | + | chr1_3:8500297-8500316 | Msa0101850:intron | 45.0% |
| ! | CGGATTTTGCCAGATACTTC+AGG | + | chr1_3:8500771-8500790 | Msa0101850:CDS | 45.0% |
| TCAGCTTCTTCTTGGGAAAC+TGG | - | chr1_3:8500807-8500826 | None:intergenic | 45.0% | |
| AAGGTGGTCAGCTTCTTCTT+GGG | - | chr1_3:8500814-8500833 | None:intergenic | 45.0% | |
| AGAAGCTGACCACCTTCTAA+TGG | + | chr1_3:8500818-8500837 | Msa0101850:CDS | 45.0% | |
| ! | CAAGATGGAAGGGCATATCT+TGG | + | chr1_3:8500990-8501009 | Msa0101850:CDS | 45.0% |
| ATATCTTGGACGAGTCATGG+AGG | + | chr1_3:8501004-8501023 | Msa0101850:CDS | 45.0% | |
| ! | CTGCCAGCCTTAGCATTTTA+AGG | - | chr1_3:8501375-8501394 | None:intergenic | 45.0% |
| ! | CTGACATCCTTTTCTCTAGG+TGG | + | chr1_3:8501532-8501551 | Msa0101850:intron | 45.0% |
| CTCAATGCCACCTAGAGAAA+AGG | - | chr1_3:8501542-8501561 | None:intergenic | 45.0% | |
| CAGAAAAAACAGCCAAAGGC+TGG | - | chr1_3:8501696-8501715 | None:intergenic | 45.0% | |
| AAGGTGAAACCTGAACCATG+AGG | - | chr1_3:8501782-8501801 | None:intergenic | 45.0% | |
| TCAGGTTTCACCTTCTGAAC+CGG | + | chr1_3:8501788-8501807 | Msa0101850:intron | 45.0% | |
| GACATCATGAAACCCTCAAC+CGG | - | chr1_3:8501810-8501829 | None:intergenic | 45.0% | |
| CACCACATCCTTCAGCTTTA+TGG | - | chr1_3:8501862-8501881 | None:intergenic | 45.0% | |
| AGGTCTGTCTCTTTCACTTC+AGG | - | chr1_3:8502493-8502512 | None:intergenic | 45.0% | |
| ACTATGGTCTGCAGAGTGAA+AGG | - | chr1_3:8502513-8502532 | None:intergenic | 45.0% | |
| TGTCGAAAATGGTACTGCCG+TGG | + | chr1_3:8498532-8498551 | Msa0101850:CDS | 50.0% | |
| GTCGAAAATGGTACTGCCGT+GGG | + | chr1_3:8498533-8498552 | Msa0101850:CDS | 50.0% | |
| CAACTCACCTGCTTCTGCTA+AGG | - | chr1_3:8498603-8498622 | None:intergenic | 50.0% | |
| CTTAGCAGAAGCAGGTGAGT+TGG | + | chr1_3:8498601-8498620 | Msa0101850:intron | 50.0% | |
| TCCCTGATACCTATCCCTGT+CGG | + | chr1_3:8498635-8498654 | Msa0101850:intron | 50.0% | |
| TCCGACAGGGATAGGTATCA+GGG | - | chr1_3:8498639-8498658 | None:intergenic | 50.0% | |
| ATCCGACAGGGATAGGTATC+AGG | - | chr1_3:8498640-8498659 | None:intergenic | 50.0% | |
| AGCAAAGATCCGACAGGGAT+AGG | - | chr1_3:8498647-8498666 | None:intergenic | 50.0% | |
| AATGGCCTCCTTGCCTGTTA+TGG | + | chr1_3:8498993-8499012 | Msa0101850:CDS | 50.0% | |
| ACGAAGCACGGAACCATAAC+AGG | - | chr1_3:8499009-8499028 | None:intergenic | 50.0% | |
| TATGGTTCCGTGCTTCGTGA+AGG | + | chr1_3:8499011-8499030 | Msa0101850:CDS | 50.0% | |
| ATGTTCGCCTTCACGAAGCA+CGG | - | chr1_3:8499021-8499040 | None:intergenic | 50.0% | |
| AGGGGTTTAGGAGGGATATG+TGG | + | chr1_3:8499781-8499800 | Msa0101850:intron | 50.0% | |
| ! | TTATTTGCAGGGTTTGGGGC+AGG | + | chr1_3:8499826-8499845 | Msa0101850:intron | 50.0% |
| ! | AGAAGCAAAGGCACGCATCA+TGG | - | chr1_3:8500715-8500734 | None:intergenic | 50.0% |
| ATGCGTGCCTTTGCTTCTAG+AGG | + | chr1_3:8500717-8500736 | Msa0101850:CDS | 50.0% | |
| GAAGGTGGTCAGCTTCTTCT+TGG | - | chr1_3:8500815-8500834 | None:intergenic | 50.0% | |
| TCAGGGCTGCTTCCATTAGA+AGG | - | chr1_3:8500833-8500852 | None:intergenic | 50.0% | |
| TAATACCTGGCCAGCGTTCA+GGG | - | chr1_3:8500850-8500869 | None:intergenic | 50.0% | |
| ATAATACCTGGCCAGCGTTC+AGG | - | chr1_3:8500851-8500870 | None:intergenic | 50.0% | |
| GGCATATCTTGGACGAGTCA+TGG | + | chr1_3:8501001-8501020 | Msa0101850:CDS | 50.0% | |
| TTCACCTTCTGAACCGGTTG+AGG | + | chr1_3:8501794-8501813 | Msa0101850:CDS | 50.0% | |
| TCACCTTCTGAACCGGTTGA+GGG | + | chr1_3:8501795-8501814 | Msa0101850:CDS | 50.0% | |
| ! | AAACCCTCAACCGGTTCAGA+AGG | - | chr1_3:8501801-8501820 | None:intergenic | 50.0% |
| AAAGCAACACGGCCACTACA+AGG | + | chr1_3:8501834-8501853 | Msa0101850:CDS | 50.0% | |
| CTGCCCCACTCATCTACAAT+AGG | - | chr1_3:8501912-8501931 | None:intergenic | 50.0% | |
| ATGAGTGGGGCAGTTGTACA+GGG | + | chr1_3:8501919-8501938 | Msa0101850:CDS | 50.0% | |
| ACACCGTGAAGACTGCAATC+AGG | + | chr1_3:8501947-8501966 | Msa0101850:CDS | 50.0% | |
| GTTGAAGCTGTAACACTGGG+AGG | - | chr1_3:8502319-8502338 | None:intergenic | 50.0% | |
| TCATACGGCTGTAGAGCAGT+TGG | + | chr1_3:8502424-8502443 | Msa0101850:CDS | 50.0% | |
| GTCTCTTTCACTTCAGGTGC+AGG | - | chr1_3:8502487-8502506 | None:intergenic | 50.0% | |
| CGGAACCATAACAGGCAAGG+AGG | - | chr1_3:8499001-8499020 | None:intergenic | 55.0% | |
| GCACGGAACCATAACAGGCA+AGG | - | chr1_3:8499004-8499023 | None:intergenic | 55.0% | |
| TGAGGCTTCGGTCTCAACTC+TGG | - | chr1_3:8500681-8500700 | None:intergenic | 55.0% | |
| GGGCTGCTTCCATTAGAAGG+TGG | - | chr1_3:8500830-8500849 | None:intergenic | 55.0% | |
| TTGGACGAGTCATGGAGGCA+TGG | + | chr1_3:8501009-8501028 | Msa0101850:CDS | 55.0% | |
| AGCCAAAGGCTGGAGTCAGA+GGG | - | chr1_3:8501686-8501705 | None:intergenic | 55.0% | |
| GATGAGTGGGGCAGTTGTAC+AGG | + | chr1_3:8501918-8501937 | Msa0101850:CDS | 55.0% | |
| GAAGCTGTAACACTGGGAGG+AGG | - | chr1_3:8502316-8502335 | None:intergenic | 55.0% | |
| GGAGACCTGCGTCGTGCAAA+TGG | + | chr1_3:8498975-8498994 | Msa0101850:intron | 60.0% | |
| ATGGAAGCAGCCCTGAACGC+TGG | + | chr1_3:8500837-8500856 | Msa0101850:CDS | 60.0% | |
| GCTAAGGCTGGCAGCAAGTC+AGG | + | chr1_3:8501381-8501400 | Msa0101850:intron | 60.0% | |
| GACCCTCTGACTCCAGCCTT+TGG | + | chr1_3:8501681-8501700 | Msa0101850:intron | 60.0% | |
| CAGCCAAAGGCTGGAGTCAG+AGG | - | chr1_3:8501687-8501706 | None:intergenic | 60.0% | |
| GGAGGCCATTTGCACGACGC+AGG | - | chr1_3:8498983-8499002 | None:intergenic | 65.0% | |
| ! | TGCAGGGTTTGGGGCAGGCA+AGG | + | chr1_3:8499831-8499850 | Msa0101850:intron | 65.0% |
| ! | GCAGGGTTTGGGGCAGGCAA+GGG | + | chr1_3:8499832-8499851 | Msa0101850:intron | 65.0% |
| AGCAGCCCTGAACGCTGGCC+AGG | + | chr1_3:8500842-8500861 | Msa0101850:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 8498482 | 8502830 | 8498482 | ID=Msa0101850;Name=Msa0101850 |
| chr1_3 | mRNA | 8498482 | 8502830 | 8498482 | ID=Msa0101850-mRNA-1;Parent=Msa0101850;Name=Msa0101850-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.88|0.9|1|1|1|10|299|468 |
| chr1_3 | exon | 8498482 | 8498614 | 8498482 | ID=Msa0101850-mRNA-1:exon:3387;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8498976 | 8499073 | 8498976 | ID=Msa0101850-mRNA-1:exon:3388;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8499198 | 8499359 | 8499198 | ID=Msa0101850-mRNA-1:exon:3389;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8499446 | 8499514 | 8499446 | ID=Msa0101850-mRNA-1:exon:3390;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8499836 | 8499971 | 8499836 | ID=Msa0101850-mRNA-1:exon:3391;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8500631 | 8500863 | 8500631 | ID=Msa0101850-mRNA-1:exon:3392;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8500953 | 8501030 | 8500953 | ID=Msa0101850-mRNA-1:exon:3393;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8501438 | 8501506 | 8501438 | ID=Msa0101850-mRNA-1:exon:3394;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8501792 | 8501968 | 8501792 | ID=Msa0101850-mRNA-1:exon:3395;Parent=Msa0101850-mRNA-1 |
| chr1_3 | exon | 8502280 | 8502830 | 8502280 | ID=Msa0101850-mRNA-1:exon:3396;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8498482 | 8498614 | 8498482 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8498976 | 8499073 | 8498976 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8499198 | 8499359 | 8499198 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8499446 | 8499514 | 8499446 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8499836 | 8499971 | 8499836 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8500631 | 8500863 | 8500631 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8500953 | 8501030 | 8500953 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8501438 | 8501506 | 8501438 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8501792 | 8501968 | 8501792 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | CDS | 8502280 | 8502531 | 8502280 | ID=Msa0101850-mRNA-1:cds;Parent=Msa0101850-mRNA-1 |
| chr1_3 | three_prime_UTR | 8502532 | 8502830 | 8502532 | ID=Msa0101850-mRNA-1:three_prime_utr;Parent=Msa0101850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
