AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1132820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132820 MtrunA17_Chr5g0398861 96.429 252 8 1 1 252 1 251 4.41e-178 489
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132820 AT1G62780.1 63.095 252 78 3 1 252 1 237 2.39e-107 310

Find 70 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTTATTATCACCATTTC+TGG 0.102111 7_3:+85682038 Msa1132820:three_prime_UTR
ATCCTTTGATGTCAAGATTT+TGG 0.138015 7_3:-85681451 None:intergenic
TTTCCTTCAACTTAAATAAA+TGG 0.193641 7_3:+85674580 Msa1132820:exon
ATGAGGTCTTGTGGAGTATC+AGG 0.256254 7_3:-85675458 None:intergenic
GTCCTATTGGTCCTGTTGAT+TGG 0.268287 7_3:+85674717 Msa1132820:CDS
TTTGCCTCTGCTCCATGATT+TGG 0.296156 7_3:-85674669 None:intergenic
GGCCGGCCTAGTACACCTTC+TGG 0.301594 7_3:-85674834 None:intergenic
CAAACCTGTTCCTTCTTGTA+TGG 0.344252 7_3:-85675840 None:intergenic
TCCTATTGGTCCTGTTGATT+GGG 0.352061 7_3:+85674718 Msa1132820:CDS
AGAAGTTTGAATGCTACTTC+TGG 0.364092 7_3:+85674632 Msa1132820:CDS
GAACCAAATTCTCGATTAAC+AGG 0.370461 7_3:-85682221 None:intergenic
TTGGCATTAAAATCCGAGTT+AGG 0.370670 7_3:+85675661 Msa1132820:CDS
TGTATTGGTCCAGGTCCTAT+TGG 0.371658 7_3:+85674704 Msa1132820:CDS
CCTAGCAAGGTGGCCAGTAT+TGG 0.381900 7_3:-85674856 None:intergenic
CTAGCAAGGTGGCCAGTATT+GGG 0.384134 7_3:-85674855 None:intergenic
TAGCCATTTATTTAAGTTGA+AGG 0.385215 7_3:-85674583 None:intergenic
CCAATACTGGCCACCTTGCT+AGG 0.385665 7_3:+85674856 Msa1132820:CDS
TACGACTATGTATCTTTAGT+TGG 0.395397 7_3:+85682158 Msa1132820:three_prime_UTR
GACGACGTTCTTTCTCTTCA+CGG 0.402885 7_3:-85674941 None:intergenic
GTACTAGGCCGGCCCAATAC+TGG 0.406350 7_3:+85674843 Msa1132820:CDS
GCCGGCCTAGTACACCTTCT+GGG 0.410951 7_3:-85674833 None:intergenic
CTGAGCTTGCATCTTATCAT+AGG 0.423174 7_3:-85681403 None:intergenic
AGTTAAGTTACCCAATCAAC+AGG 0.425418 7_3:-85674728 None:intergenic
CGAGATTAATCGATCATTGT+TGG 0.431377 7_3:+85681604 Msa1132820:CDS
TAAATGGCTACGCTTAACTT+TGG 0.446560 7_3:+85674596 Msa1132820:exon
AAATCCACTATTGTGTGTAT+TGG 0.451283 7_3:+85674689 Msa1132820:CDS
TTCAATACAGTTGCTGGAGT+TGG 0.461932 7_3:+85681571 Msa1132820:intron
ACCCAATCAACAGGACCAAT+AGG 0.472506 7_3:-85674719 None:intergenic
TCTAACCACCTTGCTTGCTA+TGG 0.486696 7_3:-85674535 None:intergenic
TGGACCAATACACACAATAG+TGG 0.498779 7_3:-85674693 None:intergenic
TTCGAACTAGAACCAAATCA+TGG 0.502050 7_3:+85674657 Msa1132820:CDS
TGTATCTTTAGTTGGAAAGC+TGG 0.504899 7_3:+85682166 Msa1132820:three_prime_UTR
GAAGCAAGCTGCAGAATACA+TGG 0.509642 7_3:+85681952 Msa1132820:intron
CTTACTTGACACTGAAGCTC+AGG 0.510721 7_3:+85675487 Msa1132820:CDS
TAGGACCCAGAAGGTGTACT+AGG 0.511032 7_3:+85674828 Msa1132820:intron
AAGGCCATACAAGAAGGAAC+AGG 0.513579 7_3:+85675836 Msa1132820:CDS
TTCACGGACTTGACGCTCAA+AGG 0.514787 7_3:-85674925 None:intergenic
ACTATTGTGTGTATTGGTCC+AGG 0.514965 7_3:+85674695 Msa1132820:CDS
GGAGGATAGATTGACTGAGC+TGG 0.528319 7_3:+85675802 Msa1132820:CDS
AAGTGCACATGGTGCCAACC+AGG 0.543322 7_3:+85681649 Msa1132820:CDS
CAAGGTGGCCAGTATTGGGC+CGG 0.546539 7_3:-85674851 None:intergenic
AAATCGAAGTTGTCCTAACT+CGG 0.556942 7_3:-85675674 None:intergenic
AGCATTCAAACTTCTTGTTG+TGG 0.561221 7_3:-85674624 None:intergenic
ACCCAGAAGGTGTACTAGGC+CGG 0.561282 7_3:+85674832 Msa1132820:CDS
AACCAAAATCTTGACATCAA+AGG 0.566416 7_3:+85681449 Msa1132820:CDS
AAGTATTCAATGAGGTCTTG+TGG 0.566777 7_3:-85675467 None:intergenic
GATAGTAACCATAGCAAGCA+AGG 0.570122 7_3:+85674527 Msa1132820:five_prime_UTR
AATACATGGAGAAGCTCCGT+GGG 0.575310 7_3:+85681966 Msa1132820:CDS
AGCTCAGCTCATAAAAGCCA+AGG 0.578424 7_3:+85681419 Msa1132820:CDS
TGAGGTCTTGTGGAGTATCA+GGG 0.585430 7_3:-85675457 None:intergenic
TCTTAAACTCAAGCCTAGCA+AGG 0.605985 7_3:-85674869 None:intergenic
TTAGAGAAGGCCATACAAGA+AGG 0.624872 7_3:+85675830 Msa1132820:CDS
AAGTAAACTTACATCACGAA+GGG 0.626470 7_3:-85674967 None:intergenic
TCAACAGGACCAATAGGACC+TGG 0.627773 7_3:-85674713 None:intergenic
AAAGTAAACTTACATCACGA+AGG 0.630395 7_3:-85674968 None:intergenic
ATGATTTCTGCAGCTTACGG+AGG 0.630425 7_3:+85675784 Msa1132820:intron
ATATTTGATACAATTATCGA+CGG 0.631236 7_3:-85682070 None:intergenic
TGAGCTGGAGGCTTTAGAGA+AGG 0.633356 7_3:+85675817 Msa1132820:CDS
ATTTGCTGTTAACAAAACGC+AGG 0.637369 7_3:+85675693 Msa1132820:CDS
AGAACCAAATCATGGAGCAG+AGG 0.649829 7_3:+85674665 Msa1132820:CDS
GGATAGATTGACTGAGCTGG+AGG 0.664651 7_3:+85675805 Msa1132820:CDS
GAATACATGGAGAAGCTCCG+TGG 0.672335 7_3:+85681965 Msa1132820:CDS
AGATTGCAAGAATGAGACCA+CGG 0.675769 7_3:+85675522 Msa1132820:CDS
TGTCAAGTAAGTATTCAATG+AGG 0.689411 7_3:-85675475 None:intergenic
TGTATTTGAGAACAGCCCCA+CGG 0.699113 7_3:-85681982 None:intergenic
TAAACTCAAGCCTAGCAAGG+TGG 0.709876 7_3:-85674866 None:intergenic
TGATTGATGTAGGACCCAGA+AGG 0.731704 7_3:+85674819 Msa1132820:intron
GAAAACATATCAAGTGCACA+TGG 0.748043 7_3:+85681638 Msa1132820:CDS
AGTAACCATAGCAAGCAAGG+TGG 0.761290 7_3:+85674530 Msa1132820:five_prime_UTR
ATACATGGAGAAGCTCCGTG+GGG 0.765327 7_3:+85681967 Msa1132820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATTTAGAGATTAAAT+TGG + chr7_3:85675299-85675318 Msa1132820:intron 10.0%
!! AAAAAGATGTATAATAAATA+GGG + chr7_3:85676201-85676220 Msa1132820:intron 10.0%
!! GAAAAAGATGTATAATAAAT+AGG + chr7_3:85676200-85676219 Msa1132820:intron 15.0%
!! AAAAGATGTATAATAAATAG+GGG + chr7_3:85676202-85676221 Msa1132820:intron 15.0%
!! AAAGAAATAATTAATGTAGT+TGG + chr7_3:85676234-85676253 Msa1132820:intron 15.0%
!! TTTATATTTGATTGATGAAT+TGG + chr7_3:85678987-85679006 Msa1132820:intron 15.0%
!! TTGATATATTAACAATTTGA+AGG + chr7_3:85681231-85681250 Msa1132820:intron 15.0%
!! TTTCCTTCAACTTAAATAAA+TGG + chr7_3:85674580-85674599 Msa1132820:exon 20.0%
!!! GATTAGAGTAATAATCATTT+TGG - chr7_3:85675217-85675236 None:intergenic 20.0%
!!! TAGCCTTTATTATTTTATGA+CGG + chr7_3:85675387-85675406 Msa1132820:intron 20.0%
!! ACTAAGCAAATGAAAAATAA+CGG - chr7_3:85675427-85675446 None:intergenic 20.0%
!! CACTAGAATAATTTATTCAA+TGG - chr7_3:85675745-85675764 None:intergenic 20.0%
!! GACAAAAAAAATTCTCAAAA+GGG + chr7_3:85676284-85676303 Msa1132820:intron 20.0%
!!! AAAACAGATTTTGATATAGA+AGG + chr7_3:85678243-85678262 Msa1132820:intron 20.0%
!! ATGAATCTAACATTAAAGTA+CGG + chr7_3:85678610-85678629 Msa1132820:intron 20.0%
!! AAAAAATTTAAATGCAGTGA+AGG + chr7_3:85678824-85678843 Msa1132820:intron 20.0%
!! AAAAATGTCACAAATTATTG+TGG - chr7_3:85679476-85679495 Msa1132830:intron 20.0%
!! ATCTCAATTTCATAAGAAAT+TGG + chr7_3:85680062-85680081 Msa1132820:intron 20.0%
!! TACAATTTCATGAACTAAAT+TGG - chr7_3:85681052-85681071 None:intergenic 20.0%
!!! AATTTAGTTCATGAAATTGT+AGG + chr7_3:85681051-85681070 Msa1132820:intron 20.0%
!!! ATTTAGTTCATGAAATTGTA+GGG + chr7_3:85681052-85681071 Msa1132820:intron 20.0%
!!! GTGAAATTTTCTTAATTTCA+AGG - chr7_3:85681093-85681112 None:intergenic 20.0%
!!! TTCTTTATAGTTGATAGTAT+CGG + chr7_3:85681508-85681527 Msa1132820:intron 20.0%
!!! AACTTTTATGTTTCTAGTTT+CGG - chr7_3:85681819-85681838 None:intergenic 20.0%
!! ATATTTGATACAATTATCGA+CGG - chr7_3:85682073-85682092 None:intergenic 20.0%
!!! TAGCCATTTATTTAAGTTGA+AGG - chr7_3:85674586-85674605 None:intergenic 25.0%
! TCAATCAATAAAGAGTTAGT+TGG - chr7_3:85674785-85674804 None:intergenic 25.0%
! TTTGATTGATTGATTGATGT+AGG + chr7_3:85674809-85674828 Msa1132820:intron 25.0%
!! GTGTGTTTTCTTAGTAATTT+TGG + chr7_3:85675070-85675089 Msa1132820:intron 25.0%
! TTTGATACTTTCAAAGACTA+TGG + chr7_3:85675166-85675185 Msa1132820:intron 25.0%
! ATTTAGAGATTAAATTGGAG+AGG + chr7_3:85675304-85675323 Msa1132820:intron 25.0%
! TTTAGAGATTAAATTGGAGA+GGG + chr7_3:85675305-85675324 Msa1132820:intron 25.0%
! GAACCGTCATAAAATAATAA+AGG - chr7_3:85675393-85675412 None:intergenic 25.0%
!! ATTAAACGACGAATTCTTTT+TGG + chr7_3:85675642-85675661 Msa1132820:CDS 25.0%
! GAATAAATTATTCTAGTGTC+TGG + chr7_3:85675747-85675766 Msa1132820:intron 25.0%
! CAGAAATCATCATTGTAAAA+AGG - chr7_3:85675774-85675793 None:intergenic 25.0%
! GTTTAACAATTCACTCTATT+CGG - chr7_3:85675878-85675897 None:intergenic 25.0%
! ATGTTAAACTCAGAGAAATT+AGG + chr7_3:85675923-85675942 Msa1132820:intron 25.0%
! TGTTAAACTCAGAGAAATTA+GGG + chr7_3:85675924-85675943 Msa1132820:intron 25.0%
!!! TTCCCGTTATTTTTTCAAAA+GGG - chr7_3:85676064-85676083 None:intergenic 25.0%
!!! ATTCCCGTTATTTTTTCAAA+AGG - chr7_3:85676065-85676084 None:intergenic 25.0%
!!! AATTTTATCCTTTAAGAGAG+AGG + chr7_3:85676137-85676156 Msa1132820:intron 25.0%
! GGACAAAAAAAATTCTCAAA+AGG + chr7_3:85676283-85676302 Msa1132820:intron 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG + chr7_3:85676298-85676317 Msa1132820:intron 25.0%
! ATTATGACTGTACAATATGT+TGG + chr7_3:85676349-85676368 Msa1132820:intron 25.0%
!!! ATTATTCATTAGTGCTGATT+TGG - chr7_3:85676432-85676451 None:intergenic 25.0%
!! ACTTTTTATCGAAAATTGGT+TGG - chr7_3:85677139-85677158 None:intergenic 25.0%
!! ACCAATTTTCGATAAAAAGT+TGG + chr7_3:85677139-85677158 Msa1132820:intron 25.0%
!! CCAATTTTCGATAAAAAGTT+GGG + chr7_3:85677140-85677159 Msa1132820:intron 25.0%
!! TTCTTTGTATGGATTAAAAC+AGG - chr7_3:85677563-85677582 None:intergenic 25.0%
!!! TTTAGTTTGCAAACAGTATT+AGG + chr7_3:85677586-85677605 Msa1132820:intron 25.0%
! AATATAAAGATTCGTTCAGA+TGG - chr7_3:85677847-85677866 None:intergenic 25.0%
! TATTCCTTCTTCATATAAAC+AGG - chr7_3:85677995-85678014 None:intergenic 25.0%
! TGTTTATATGAAGAAGGAAT+AGG + chr7_3:85677994-85678013 Msa1132820:intron 25.0%
!!! TTATTTCCTAATAGTTCTGA+AGG - chr7_3:85678219-85678238 Msa1132830:intron 25.0%
! TCAGAACTATTAGGAAATAA+TGG + chr7_3:85678219-85678238 Msa1132820:intron 25.0%
! ATATAGAAGGATGATTATCT+TGG + chr7_3:85678256-85678275 Msa1132820:intron 25.0%
!! AGCATAAAAAACCTTTTTGA+TGG + chr7_3:85678355-85678374 Msa1132820:intron 25.0%
!! GCATAAAAAACCTTTTTGAT+GGG + chr7_3:85678356-85678375 Msa1132820:intron 25.0%
!! TCATTGTTTAAAACATGAGA+AGG + chr7_3:85678525-85678544 Msa1132820:intron 25.0%
! AAAATGGCATATTATCTCAA+AGG - chr7_3:85678704-85678723 Msa1132830:intron 25.0%
! TTTATTTCAAGAATTCTTGC+AGG - chr7_3:85678727-85678746 Msa1132830:intron 25.0%
!! AAATTTTACGTTCTGACAAT+GGG - chr7_3:85678767-85678786 Msa1132830:intron 25.0%
!! AAAATTTTACGTTCTGACAA+TGG - chr7_3:85678768-85678787 Msa1132830:intron 25.0%
!! TATGATTCATAGTGATTTGT+GGG - chr7_3:85678955-85678974 Msa1132830:intron 25.0%
! ATATGATTCATAGTGATTTG+TGG - chr7_3:85678956-85678975 Msa1132830:intron 25.0%
! TCACTATGAATCATATCAAA+AGG + chr7_3:85678960-85678979 Msa1132820:intron 25.0%
! ATTTGATTGATGAATTGGAA+AGG + chr7_3:85678992-85679011 Msa1132820:intron 25.0%
! TTTGATTGATGAATTGGAAA+GGG + chr7_3:85678993-85679012 Msa1132820:intron 25.0%
! CTTCATGATTTAATAAAGTC+AGG - chr7_3:85679104-85679123 Msa1132830:intron 25.0%
! AAAGTTGAATTCTCAAATTC+TGG - chr7_3:85679308-85679327 Msa1132830:intron 25.0%
! TTATTAAAGAATGTCCAATC+AGG - chr7_3:85679736-85679755 Msa1132830:CDS 25.0%
!! AAATTGAGATCTGATTTTGA+GGG - chr7_3:85680052-85680071 Msa1132830:intron 25.0%
! TTCTCATTTCATGAATCTTT+GGG - chr7_3:85680173-85680192 Msa1132830:intron 25.0%
! ATTCTCATTTCATGAATCTT+TGG - chr7_3:85680174-85680193 Msa1132830:intron 25.0%
! TGAAATTTCAGTTTATCAAC+AGG - chr7_3:85680221-85680240 Msa1132830:intron 25.0%
! ATGTTAAACTCAGAGAAATT+AGG + chr7_3:85675923-85675942 Msa1132820:intron 25.0%
! TGTTAAACTCAGAGAAATTA+GGG + chr7_3:85675924-85675943 Msa1132820:intron 25.0%
! ATTATGACTGTACAATATGT+TGG + chr7_3:85676349-85676368 Msa1132820:intron 25.0%
!!! ATTATTCATTAGTGCTGATT+TGG - chr7_3:85676432-85676451 None:intergenic 25.0%
!! TGATTGAGAATTTTCAAATC+CGG - chr7_3:85681124-85681143 None:intergenic 25.0%
! TTAATATATCAAAACAGTCC+TGG - chr7_3:85681223-85681242 None:intergenic 25.0%
! AATTGATCAAATAGCCAATT+TGG - chr7_3:85681289-85681308 None:intergenic 25.0%
! AAATTGGCTATTTGATCAAT+TGG + chr7_3:85681288-85681307 Msa1132820:intron 25.0%
!! TGATATGTTTTCATCAAGAA+GGG - chr7_3:85681630-85681649 None:intergenic 25.0%
!! TTGATATGTTTTCATCAAGA+AGG - chr7_3:85681631-85681650 None:intergenic 25.0%
!! CATTCAATTGATATTTTACC+TGG - chr7_3:85681670-85681689 None:intergenic 25.0%
! AATGAGTTAAAGATTATAGC+TGG - chr7_3:85681763-85681782 None:intergenic 25.0%
! CATGTTCAGTAAATTAAATC+TGG - chr7_3:85681850-85681869 None:intergenic 25.0%
!! CAGATTTAATTTACTGAACA+TGG + chr7_3:85681848-85681867 Msa1132820:intron 25.0%
! TACTTTATTATCACCATTTC+TGG + chr7_3:85682038-85682057 Msa1132820:three_prime_UTR 25.0%
AAATCCACTATTGTGTGTAT+TGG + chr7_3:85674689-85674708 Msa1132820:CDS 30.0%
AAGTAAACTTACATCACGAA+GGG - chr7_3:85674970-85674989 None:intergenic 30.0%
AAAGTAAACTTACATCACGA+AGG - chr7_3:85674971-85674990 None:intergenic 30.0%
! TTTTGGTCTCTAAATATTCG+AGG - chr7_3:85675200-85675219 None:intergenic 30.0%
!!! GAAAACTTGTCATTTTAGCA+TGG - chr7_3:85675279-85675298 None:intergenic 30.0%
TGTCAAGTAAGTATTCAATG+AGG - chr7_3:85675478-85675497 None:intergenic 30.0%
AGAGAAACTAAGAGAAATGA+GGG + chr7_3:85675900-85675919 Msa1132820:intron 30.0%
ATGAAAACATTCCAGCAAAA+GGG - chr7_3:85675963-85675982 None:intergenic 30.0%
AATGAAAACATTCCAGCAAA+AGG - chr7_3:85675964-85675983 None:intergenic 30.0%
! AATAACGGGAATTAAGATAG+TGG + chr7_3:85676073-85676092 Msa1132820:intron 30.0%
AATGTAGTTGGAAATAGCAA+AGG + chr7_3:85676246-85676265 Msa1132820:intron 30.0%
ATGTAGTTGGAAATAGCAAA+GGG + chr7_3:85676247-85676266 Msa1132820:intron 30.0%
! CTCAAAAGGGTCTTATAATT+AGG + chr7_3:85676297-85676316 Msa1132820:intron 30.0%
! CCCAACTTTTTATCGAAAAT+TGG - chr7_3:85677143-85677162 None:intergenic 30.0%
! TGTGATACTTCTTGTTTATG+TGG - chr7_3:85677434-85677453 None:intergenic 30.0%
! AAGTATCACAATTCCTTTTG+AGG + chr7_3:85677444-85677463 Msa1132820:intron 30.0%
TTTCTACAAAGAACCTCAAA+AGG - chr7_3:85677460-85677479 None:intergenic 30.0%
! AAACTAAAGCGTTCTTTGTA+TGG - chr7_3:85677574-85677593 None:intergenic 30.0%
CAAACAGTATTAGGTAATGA+GGG + chr7_3:85677595-85677614 Msa1132820:intron 30.0%
TGATGTAAACTTCTTCTTTG+AGG + chr7_3:85677635-85677654 Msa1132820:intron 30.0%
AACACAAATTTACTACCAAG+AGG + chr7_3:85677868-85677887 Msa1132820:intron 30.0%
TTCTTCATATAAACAGGCTA+TGG - chr7_3:85677989-85678008 None:intergenic 30.0%
ATAGCCTGTTTATATGAAGA+AGG + chr7_3:85677988-85678007 Msa1132820:intron 30.0%
AAAGTTGCAGTCAAAGATAA+AGG + chr7_3:85678027-85678046 Msa1132820:intron 30.0%
TTAGAATAACCATACTTCTC+TGG + chr7_3:85678051-85678070 Msa1132820:intron 30.0%
TAGAATAACCATACTTCTCT+GGG + chr7_3:85678052-85678071 Msa1132820:intron 30.0%
! TCTGTTAAATGTGCTTTTCT+TGG - chr7_3:85678390-85678409 Msa1132830:intron 30.0%
TTACCAAATAACCTCAAGAA+GGG + chr7_3:85678498-85678517 Msa1132820:intron 30.0%
! AATTTTACGTTCTGACAATG+GGG - chr7_3:85678766-85678785 Msa1132830:intron 30.0%
TATTGTGCATGAGATATAAC+AGG + chr7_3:85678921-85678940 Msa1132820:intron 30.0%
! ATGATTCATAGTGATTTGTG+GGG - chr7_3:85678954-85678973 Msa1132830:intron 30.0%
GATTGCAATTCTTGTAAACT+TGG - chr7_3:85679035-85679054 Msa1132830:intron 30.0%
TTAATAAAGTCAGGAGTTCT+TGG - chr7_3:85679095-85679114 Msa1132830:intron 30.0%
! TCATGAAGTACATTTGAGTT+TGG + chr7_3:85679116-85679135 Msa1132820:intron 30.0%
! CATGAAGTACATTTGAGTTT+GGG + chr7_3:85679117-85679136 Msa1132820:intron 30.0%
! CAACTGTTAGTTTCCAATTA+TGG - chr7_3:85679160-85679179 Msa1132830:intron 30.0%
TAATTGGAAACTAACAGTTG+CGG + chr7_3:85679160-85679179 Msa1132820:intron 30.0%
GCGGAATTACAAGAAATAAA+AGG + chr7_3:85679179-85679198 Msa1132820:intron 30.0%
GAAGACAACAATGAATTAAG+AGG + chr7_3:85679215-85679234 Msa1132820:intron 30.0%
TTGAAAATACATACTGCAGA+TGG - chr7_3:85679449-85679468 Msa1132830:intron 30.0%
! ATCATTTGTTGAACCATTTC+AGG + chr7_3:85679608-85679627 Msa1132820:intron 30.0%
TTCATTAAGACATTCATCCA+AGG + chr7_3:85679988-85680007 Msa1132820:intron 30.0%
! GAAATTGAGATCTGATTTTG+AGG - chr7_3:85680053-85680072 Msa1132830:intron 30.0%
TATAAAGATTTGTCAGCTGA+GGG - chr7_3:85680130-85680149 Msa1132830:intron 30.0%
TTATAAAGATTTGTCAGCTG+AGG - chr7_3:85680131-85680150 Msa1132830:intron 30.0%
CTGAAATTTCATGTTCAAGT+TGG + chr7_3:85680230-85680249 Msa1132820:intron 30.0%
TGGAATAGTTCTTTCCATTT+AGG + chr7_3:85680512-85680531 Msa1132820:intron 30.0%
ATCAAACTTATCTGTAGACA+TGG + chr7_3:85680549-85680568 Msa1132820:intron 30.0%
TGGAAAAAAAAATCACAGCA+GGG + chr7_3:85680587-85680606 Msa1132820:intron 30.0%
ACAAAAAGAAAACACTGTGA+TGG + chr7_3:85680709-85680728 Msa1132820:intron 30.0%
GTTTAACATGGTATCAATCT+AGG - chr7_3:85680742-85680761 None:intergenic 30.0%
TAGTTTCTCTGAGTTTAACA+TGG - chr7_3:85675890-85675909 None:intergenic 30.0%
AGAGAAACTAAGAGAAATGA+GGG + chr7_3:85675900-85675919 Msa1132820:intron 30.0%
ATGAAAACATTCCAGCAAAA+GGG - chr7_3:85675963-85675982 None:intergenic 30.0%
AATGAAAACATTCCAGCAAA+AGG - chr7_3:85675964-85675983 None:intergenic 30.0%
GAAAATTTCACAATGATCTC+CGG + chr7_3:85681102-85681121 Msa1132820:intron 30.0%
! ATCAGTGATTTTCAATATCC+AGG + chr7_3:85681202-85681221 Msa1132820:intron 30.0%
!!! TTGATGTCAAGATTTTGGTT+AGG - chr7_3:85681449-85681468 None:intergenic 30.0%
AACCAAAATCTTGACATCAA+AGG + chr7_3:85681449-85681468 Msa1132820:CDS 30.0%
! ATCCTTTGATGTCAAGATTT+TGG - chr7_3:85681454-85681473 None:intergenic 30.0%
! ACTTCTGTTCTAGTTAAACT+AGG + chr7_3:85681537-85681556 Msa1132820:intron 30.0%
TTTATCTTCAATACAGTTGC+TGG + chr7_3:85681565-85681584 Msa1132820:intron 30.0%
! CAATTGATATTTTACCTGGT+TGG - chr7_3:85681666-85681685 None:intergenic 30.0%
!!! GGAATTGTCAATTTTGAAAC+AGG + chr7_3:85681721-85681740 Msa1132820:intron 30.0%
! AATATGCTGTACTCTAAGAA+GGG - chr7_3:85681787-85681806 None:intergenic 30.0%
! AAATATGCTGTACTCTAAGA+AGG - chr7_3:85681788-85681807 None:intergenic 30.0%
TTTGAACATAACAGAACTTG+TGG + chr7_3:85681877-85681896 Msa1132820:intron 30.0%
TACGACTATGTATCTTTAGT+TGG + chr7_3:85682158-85682177 Msa1132820:three_prime_UTR 30.0%
TAAATGGCTACGCTTAACTT+TGG + chr7_3:85674596-85674615 Msa1132820:exon 35.0%
AGCATTCAAACTTCTTGTTG+TGG - chr7_3:85674627-85674646 None:intergenic 35.0%
! AGAAGTTTGAATGCTACTTC+TGG + chr7_3:85674632-85674651 Msa1132820:CDS 35.0%
TTCGAACTAGAACCAAATCA+TGG + chr7_3:85674657-85674676 Msa1132820:CDS 35.0%
AGTTAAGTTACCCAATCAAC+AGG - chr7_3:85674731-85674750 None:intergenic 35.0%
!!! AACTTGTCATTTTAGCATGG+TGG - chr7_3:85675276-85675295 None:intergenic 35.0%
AAGTATTCAATGAGGTCTTG+TGG - chr7_3:85675470-85675489 None:intergenic 35.0%
TTGGCATTAAAATCCGAGTT+AGG + chr7_3:85675661-85675680 Msa1132820:CDS 35.0%
AAATCGAAGTTGTCCTAACT+CGG - chr7_3:85675677-85675696 None:intergenic 35.0%
!! ATTTGCTGTTAACAAAACGC+AGG + chr7_3:85675693-85675712 Msa1132820:CDS 35.0%
! AGGTATCTGACTCTTTTTGT+TGG + chr7_3:85675713-85675732 Msa1132820:intron 35.0%
ATGATGATTTCTGCAGCTTA+CGG + chr7_3:85675781-85675800 Msa1132820:intron 35.0%
AAGGAACAGGTTTGTGAAAA+TGG + chr7_3:85675849-85675868 Msa1132820:intron 35.0%
CAGAGAAACTAAGAGAAATG+AGG + chr7_3:85675899-85675918 Msa1132820:intron 35.0%
! AAAACTATGATCCCTTTTGC+TGG + chr7_3:85675949-85675968 Msa1132820:intron 35.0%
TGTAACTGTTATCTACAGCT+AGG + chr7_3:85676004-85676023 Msa1132820:intron 35.0%
TCAAAAGGGCCCTATAATTA+GGG - chr7_3:85676050-85676069 None:intergenic 35.0%
TTCAAAAGGGCCCTATAATT+AGG - chr7_3:85676051-85676070 None:intergenic 35.0%
!! GGGCCCTTTTGAAAAAATAA+CGG + chr7_3:85676058-85676077 Msa1132820:intron 35.0%
!! GGCCCTTTTGAAAAAATAAC+GGG + chr7_3:85676059-85676078 Msa1132820:intron 35.0%
! TTATCCTTTAAGAGAGAGGT+TGG + chr7_3:85676141-85676160 Msa1132820:intron 35.0%
TAAACCAACCTCTCTCTTAA+AGG - chr7_3:85676148-85676167 None:intergenic 35.0%
TGTAGTTGGAAATAGCAAAG+GGG + chr7_3:85676248-85676267 Msa1132820:intron 35.0%
! AGCAAAGGGGTCTTATAAAA+AGG + chr7_3:85676261-85676280 Msa1132820:intron 35.0%
! GCAAAGGGGTCTTATAAAAA+GGG + chr7_3:85676262-85676281 Msa1132820:intron 35.0%
! AAGGGTCTTATAATTAGGGA+CGG + chr7_3:85676302-85676321 Msa1132820:intron 35.0%
ACTTACCAGCATCAATTTGA+GGG - chr7_3:85676481-85676500 None:intergenic 35.0%
! AGTGATAATTTTGCGGTCAT+AGG + chr7_3:85676601-85676620 Msa1132820:intron 35.0%
GGTTGATTGTCATTCAATCA+GGG - chr7_3:85676630-85676649 None:intergenic 35.0%
! AGGTTGATTGTCATTCAATC+AGG - chr7_3:85676631-85676650 None:intergenic 35.0%
! ACTGGATGGTGTATGTTTTT+AGG - chr7_3:85676884-85676903 None:intergenic 35.0%
GTATGCTTGAAGTTGTATTG+CGG + chr7_3:85676949-85676968 Msa1132820:intron 35.0%
! TAGCTTTACATTAACCTCCA+TGG + chr7_3:85677192-85677211 Msa1132820:intron 35.0%
AGCTTTACATTAACCTCCAT+GGG + chr7_3:85677193-85677212 Msa1132820:intron 35.0%
TACTCAGGATCTTATTCACA+TGG - chr7_3:85677251-85677270 None:intergenic 35.0%
TGACAAAGATGCCTTTATGT+TGG + chr7_3:85677284-85677303 Msa1132820:intron 35.0%
GAAGTGCAATTCCAACATAA+AGG - chr7_3:85677298-85677317 None:intergenic 35.0%
! GGACAACTCACTTATTTCTT+GGG - chr7_3:85677325-85677344 None:intergenic 35.0%
! TGGACAACTCACTTATTTCT+TGG - chr7_3:85677326-85677345 None:intergenic 35.0%
ACTTTCCACATGAAAGATCT+TGG - chr7_3:85677346-85677365 None:intergenic 35.0%
GTTCTTTGTAGAAAGAGAGA+TGG + chr7_3:85677466-85677485 Msa1132820:intron 35.0%
! AAGTTTAGAACAACACTGCT+TGG - chr7_3:85677520-85677539 None:intergenic 35.0%
! AACTTTTCAAACCACACTCT+AGG + chr7_3:85677535-85677554 Msa1132820:intron 35.0%
GCAAACAGTATTAGGTAATG+AGG + chr7_3:85677594-85677613 Msa1132820:intron 35.0%
GTTTACATCAAACTTCCAAC+TGG - chr7_3:85677625-85677644 None:intergenic 35.0%
!! AGTTCTGACAGTAGTCATTT+TGG + chr7_3:85677732-85677751 Msa1132820:intron 35.0%
GAATAAGCAAGAATTTGGTC+TGG - chr7_3:85677785-85677804 None:intergenic 35.0%
CTTGGGAATAAGCAAGAATT+TGG - chr7_3:85677790-85677809 None:intergenic 35.0%
ACTAGAGGAAAATCAGACAT+GGG - chr7_3:85677923-85677942 None:intergenic 35.0%
AGAATAACCATACTTCTCTG+GGG + chr7_3:85678053-85678072 Msa1132820:intron 35.0%
TGTTCACCTTCAGAACTATT+AGG + chr7_3:85678210-85678229 Msa1132820:intron 35.0%
TTCTTGAAACACGAATCCTA+TGG + chr7_3:85678319-85678338 Msa1132820:intron 35.0%
AACAAAACAAACACAGCCAA+AGG + chr7_3:85678449-85678468 Msa1132820:intron 35.0%
CTTACCAAATAACCTCAAGA+AGG + chr7_3:85678497-85678516 Msa1132820:intron 35.0%
TTAAAACATGAGAAGGCAAG+CGG + chr7_3:85678532-85678551 Msa1132820:intron 35.0%
TAGATTCATTTGTACCCTCT+CGG - chr7_3:85678599-85678618 Msa1132830:intron 35.0%
CAAGAATTCTTGCAGGAAAA+TGG - chr7_3:85678720-85678739 Msa1132830:intron 35.0%
! ATTTTACGTTCTGACAATGG+GGG - chr7_3:85678765-85678784 Msa1132830:intron 35.0%
TGAAAACTGAGTCTGAACAA+AGG + chr7_3:85678797-85678816 Msa1132820:intron 35.0%
AATTGAACAGCACTAAGAGA+CGG + chr7_3:85679056-85679075 Msa1132820:intron 35.0%
! AAATTCTGGTTGTTATGTGC+AGG - chr7_3:85679294-85679313 Msa1132830:intron 35.0%
TGCAACCATTGTCAACTAAT+TGG + chr7_3:85679327-85679346 Msa1132820:intron 35.0%
ATATCACCTATTGCTGTGAT+AGG + chr7_3:85679413-85679432 Msa1132820:intron 35.0%
AGTTTACCTATCACAGCAAT+AGG - chr7_3:85679422-85679441 Msa1132830:intron 35.0%
TTTAAGAGCAGCAGCATTAT+TGG + chr7_3:85679493-85679512 Msa1132820:intron 35.0%
TCAAAATACCAAGGAGAACT+AGG + chr7_3:85679539-85679558 Msa1132820:intron 35.0%
!! TTTTCTGCTTTAGGTCTTTC+AGG - chr7_3:85679578-85679597 Msa1132830:CDS 35.0%
TGAAAGACCTAAAGCAGAAA+AGG + chr7_3:85679577-85679596 Msa1132820:intron 35.0%
!! TTCTACTTCAGTTGTTTCTG+TGG - chr7_3:85679669-85679688 Msa1132830:CDS 35.0%
AACAACTGAAGTAGAAGAAC+CGG + chr7_3:85679673-85679692 Msa1132820:intron 35.0%
!!! TGCAAACCTTTTTAGGACAA+TGG + chr7_3:85679780-85679799 Msa1132820:intron 35.0%
!!! GCAAACCTTTTTAGGACAAT+GGG + chr7_3:85679781-85679800 Msa1132820:intron 35.0%
ATTAAGACATTCATCCAAGG+AGG + chr7_3:85679991-85680010 Msa1132820:intron 35.0%
TTAAGACATTCATCCAAGGA+GGG + chr7_3:85679992-85680011 Msa1132820:intron 35.0%
!! AAGAAATTGGTCTCGTTTTG+TGG + chr7_3:85680075-85680094 Msa1132820:intron 35.0%
AATCTTTGGGCTGAATATAC+TGG - chr7_3:85680160-85680179 Msa1132830:intron 35.0%
CTGAGATTGAGGACAATATT+AGG + chr7_3:85680328-85680347 Msa1132820:intron 35.0%
!! TCCTTGTGAGTTGTTTTGTT+AGG + chr7_3:85680415-85680434 Msa1132820:intron 35.0%
TCCTAACAAAACAACTCACA+AGG - chr7_3:85680419-85680438 Msa1132830:CDS 35.0%
TGGAAAGAACTATTCCACAT+GGG - chr7_3:85680509-85680528 Msa1132830:CDS 35.0%
ATGGAAAGAACTATTCCACA+TGG - chr7_3:85680510-85680529 Msa1132830:CDS 35.0%
TTCCATTTAGGCGAACAAAA+AGG + chr7_3:85680524-85680543 Msa1132820:intron 35.0%
CTGGAAAAAAAAATCACAGC+AGG + chr7_3:85680586-85680605 Msa1132820:intron 35.0%
AACTCAGAAAGACACTAAAC+TGG + chr7_3:85680684-85680703 Msa1132820:intron 35.0%
ACTCAGAAAGACACTAAACT+GGG + chr7_3:85680685-85680704 Msa1132820:intron 35.0%
CAGAGAAACTAAGAGAAATG+AGG + chr7_3:85675899-85675918 Msa1132820:intron 35.0%
! AAAACTATGATCCCTTTTGC+TGG + chr7_3:85675949-85675968 Msa1132820:intron 35.0%
TGTAACTGTTATCTACAGCT+AGG + chr7_3:85676004-85676023 Msa1132820:intron 35.0%
ATTTGGTCCTTGAAATGGTA+CGG - chr7_3:85681272-85681291 None:intergenic 35.0%
TACCATTTCAAGGACCAAAT+TGG + chr7_3:85681272-85681291 Msa1132820:intron 35.0%
!!! GATTTTGGTTAGGTTTTCCT+TGG - chr7_3:85681439-85681458 None:intergenic 35.0%
CGAGATTAATCGATCATTGT+TGG + chr7_3:85681604-85681623 Msa1132820:CDS 35.0%
GAAAACATATCAAGTGCACA+TGG + chr7_3:85681638-85681657 Msa1132820:CDS 35.0%
AGATTATAGCTGGATGATAC+TGG - chr7_3:85681753-85681772 None:intergenic 35.0%
TGTATCTTTAGTTGGAAAGC+TGG + chr7_3:85682166-85682185 Msa1132820:three_prime_UTR 35.0%
GATAGTAACCATAGCAAGCA+AGG + chr7_3:85674527-85674546 Msa1132820:five_prime_UTR 40.0%
TGGACCAATACACACAATAG+TGG - chr7_3:85674696-85674715 None:intergenic 40.0%
! ACTATTGTGTGTATTGGTCC+AGG + chr7_3:85674695-85674714 Msa1132820:CDS 40.0%
! TCCTATTGGTCCTGTTGATT+GGG + chr7_3:85674718-85674737 Msa1132820:CDS 40.0%
TCTTAAACTCAAGCCTAGCA+AGG - chr7_3:85674872-85674891 None:intergenic 40.0%
AGATTGCAAGAATGAGACCA+CGG + chr7_3:85675522-85675541 Msa1132820:CDS 40.0%
!! TTGAAAAGTACTACGAACCG+TGG - chr7_3:85675542-85675561 None:intergenic 40.0%
TTAGAGAAGGCCATACAAGA+AGG + chr7_3:85675830-85675849 Msa1132820:CDS 40.0%
CAAACCTGTTCCTTCTTGTA+TGG - chr7_3:85675843-85675862 None:intergenic 40.0%
TACCTCCGTCCCTAATTATA+GGG + chr7_3:85676038-85676057 Msa1132820:intron 40.0%
TCAAGTCTGTACAAATCTGC+TGG + chr7_3:85676384-85676403 Msa1132820:intron 40.0%
TTACCAGCATCAATTTGAGG+GGG - chr7_3:85676479-85676498 None:intergenic 40.0%
CTTACCAGCATCAATTTGAG+GGG - chr7_3:85676480-85676499 None:intergenic 40.0%
GACTTACCAGCATCAATTTG+AGG - chr7_3:85676482-85676501 None:intergenic 40.0%
! GAGGCAGAGTGATAATTTTG+CGG + chr7_3:85676594-85676613 Msa1132820:intron 40.0%
TGATTGTCATTCAATCAGGG+AGG - chr7_3:85676627-85676646 None:intergenic 40.0%
AGGATTTGCAGCAATCTGTA+TGG + chr7_3:85676679-85676698 Msa1132820:intron 40.0%
CTTGTATTATCAGCATGCAG+TGG + chr7_3:85676704-85676723 Msa1132820:intron 40.0%
! TCTGAGATTATTTGGTTGCG+AGG - chr7_3:85676770-85676789 None:intergenic 40.0%
TAGGAGATGCTCTTATCTCA+TGG - chr7_3:85676865-85676884 None:intergenic 40.0%
! GCATGAATTTACTGACTGTG+TGG + chr7_3:85677065-85677084 Msa1132820:intron 40.0%
GTGGACAGCAAAAGAGATAT+CGG + chr7_3:85677084-85677103 Msa1132820:intron 40.0%
TGGACAGCAAAAGAGATATC+GGG + chr7_3:85677085-85677104 Msa1132820:intron 40.0%
GATAAAAAGTTGGGTCTTGC+AGG + chr7_3:85677149-85677168 Msa1132820:intron 40.0%
CACTCAGCACAAATATACTC+AGG - chr7_3:85677266-85677285 None:intergenic 40.0%
GTTGTCCAAGATCTTTCATG+TGG + chr7_3:85677338-85677357 Msa1132820:intron 40.0%
!! ATCATAGCTGCTTTGGAGAA+AGG + chr7_3:85677489-85677508 Msa1132820:intron 40.0%
GTGAAAAATGCCTTTCTCCA+TGG - chr7_3:85677664-85677683 None:intergenic 40.0%
! AGGCATTTTTCACATCTAGC+TGG + chr7_3:85677671-85677690 Msa1132820:intron 40.0%
CTATTGCTGCATCTGAATCT+TGG - chr7_3:85677705-85677724 None:intergenic 40.0%
AGAATTTGGTCTGGACTATG+AGG - chr7_3:85677776-85677795 None:intergenic 40.0%
! AGGCTAGATTGGTTGTTCTT+GGG - chr7_3:85677807-85677826 None:intergenic 40.0%
! AAGGCTAGATTGGTTGTTCT+TGG - chr7_3:85677808-85677827 None:intergenic 40.0%
CACTAGAGGAAAATCAGACA+TGG - chr7_3:85677924-85677943 None:intergenic 40.0%
AGCTATAGAAGCTGAACTTC+TGG - chr7_3:85677947-85677966 None:intergenic 40.0%
TATGGAGCATAAATGTTGGC+AGG - chr7_3:85677971-85677990 None:intergenic 40.0%
AGGCTATGGAGCATAAATGT+TGG - chr7_3:85677975-85677994 None:intergenic 40.0%
ACACGAATCCTATGGAGATT+AGG + chr7_3:85678327-85678346 Msa1132820:intron 40.0%
GCTATGATCCTAATCTCCAT+AGG - chr7_3:85678338-85678357 Msa1132830:intron 40.0%
AACAGATTGAGCTGTGAGTT+TGG + chr7_3:85678404-85678423 Msa1132820:intron 40.0%
TATTCTACTCTTCGCACCTT+TGG - chr7_3:85678468-85678487 Msa1132830:intron 40.0%
GTGCGAAGAGTAGAATAGTT+TGG + chr7_3:85678471-85678490 Msa1132820:intron 40.0%
CGAAGAGTAGAATAGTTTGG+TGG + chr7_3:85678474-85678493 Msa1132820:intron 40.0%
TCTCCCTTCTTGAGGTTATT+TGG - chr7_3:85678504-85678523 Msa1132830:intron 40.0%
ACAATGATTCTCCCTTCTTG+AGG - chr7_3:85678512-85678531 Msa1132830:intron 40.0%
GTTAATTAGGTGTACAGCAG+TGG + chr7_3:85678554-85678573 Msa1132820:intron 40.0%
AAATCGCCATCTTCTTGATG+TGG - chr7_3:85678637-85678656 Msa1132830:intron 40.0%
! TTTTACGTTCTGACAATGGG+GGG - chr7_3:85678764-85678783 Msa1132830:intron 40.0%
CGACTATAGTCGTTTCACAT+GGG - chr7_3:85678877-85678896 Msa1132830:intron 40.0%
ACGACTATAGTCGTTTCACA+TGG - chr7_3:85678878-85678897 Msa1132830:intron 40.0%
ATTGAACAGCACTAAGAGAC+GGG + chr7_3:85679057-85679076 Msa1132820:intron 40.0%
CAATTATGGCATAAGCGTCT+TGG - chr7_3:85679146-85679165 Msa1132830:intron 40.0%
CAAGACGCTTATGCCATAAT+TGG + chr7_3:85679144-85679163 Msa1132820:intron 40.0%
GGAAAAAGACGTCCAACTTT+AGG + chr7_3:85679236-85679255 Msa1132820:intron 40.0%
ATGTGCAGGATCAACAATCA+GGG - chr7_3:85679280-85679299 Msa1132830:intron 40.0%
TATGTGCAGGATCAACAATC+AGG - chr7_3:85679281-85679300 Msa1132830:intron 40.0%
GTTGGCCAATTAGTTGACAA+TGG - chr7_3:85679335-85679354 Msa1132830:intron 40.0%
CTAATTGGCCAACTGAAATG+AGG + chr7_3:85679342-85679361 Msa1132820:intron 40.0%
ACCAGTAACCTCATTTCAGT+TGG - chr7_3:85679353-85679372 Msa1132830:intron 40.0%
! AATGAGGTTACTGGTTAGAC+CGG + chr7_3:85679358-85679377 Msa1132820:intron 40.0%
ACTGATGCTTATGTTTCTCC+CGG - chr7_3:85679380-85679399 Msa1132830:intron 40.0%
ACATAAGCATCAGTGAGAGA+TGG + chr7_3:85679386-85679405 Msa1132820:intron 40.0%
CATAAGCATCAGTGAGAGAT+GGG + chr7_3:85679387-85679406 Msa1132820:intron 40.0%
ATAAGCATCAGTGAGAGATG+GGG + chr7_3:85679388-85679407 Msa1132820:intron 40.0%
!!! TCCTTGGTATTTTGACTCTG+GGG - chr7_3:85679534-85679553 Msa1132830:intron 40.0%
!!! CTCCTTGGTATTTTGACTCT+GGG - chr7_3:85679535-85679554 Msa1132830:intron 40.0%
!!! TCTCCTTGGTATTTTGACTC+TGG - chr7_3:85679536-85679555 Msa1132830:intron 40.0%
!! CTTTTTCACCTAGTTCTCCT+TGG - chr7_3:85679550-85679569 Msa1132830:intron 40.0%
! GTTTCAGCCTTTTCTGCTTT+AGG - chr7_3:85679587-85679606 Msa1132830:CDS 40.0%
AAAGCTGTTGCATTTCTCCT+TGG + chr7_3:85679707-85679726 Msa1132820:intron 40.0%
! CAGTAGCTGCAAACCTTTTT+AGG + chr7_3:85679773-85679792 Msa1132820:intron 40.0%
TGCTTCCCATTGTCCTAAAA+AGG - chr7_3:85679789-85679808 Msa1132830:intron 40.0%
AGCAGATTTCTGTTGATCCA+TGG + chr7_3:85679928-85679947 Msa1132820:intron 40.0%
TAAGACATTCATCCAAGGAG+GGG + chr7_3:85679993-85680012 Msa1132820:intron 40.0%
TTGTGGTCTCATGAACTGTT+TGG + chr7_3:85680092-85680111 Msa1132820:intron 40.0%
CAAGGATGCATATGCCAAAT+GGG - chr7_3:85680401-85680420 Msa1132830:CDS 40.0%
ACAAGGATGCATATGCCAAA+TGG - chr7_3:85680402-85680421 Msa1132830:CDS 40.0%
!! GTGAGTTGTTTTGTTAGGAG+CGG + chr7_3:85680420-85680439 Msa1132820:intron 40.0%
!! TGAGTTGTTTTGTTAGGAGC+GGG + chr7_3:85680421-85680440 Msa1132820:intron 40.0%
AGAGATCTTTGTCAAAGGCA+AGG - chr7_3:85680476-85680495 Msa1132830:CDS 40.0%
CAGCTAGAGATCTTTGTCAA+AGG - chr7_3:85680481-85680500 Msa1132830:CDS 40.0%
CTTTGACAAAGATCTCTAGC+TGG + chr7_3:85680479-85680498 Msa1132820:intron 40.0%
! GTCCTTTTTGTTCGCCTAAA+TGG - chr7_3:85680529-85680548 Msa1132830:CDS 40.0%
TGAGAAATTGCTACGAGACT+TGG + chr7_3:85680631-85680650 Msa1132820:intron 40.0%
TCAAGTCTGTACAAATCTGC+TGG + chr7_3:85676384-85676403 Msa1132820:intron 40.0%
TTCATGAAATTGTAGGGTGC+TGG + chr7_3:85681058-85681077 Msa1132820:intron 40.0%
AGCCAATTTGGTCCTTGAAA+TGG - chr7_3:85681277-85681296 None:intergenic 40.0%
AGGCATCTGCATAAGCAAAT+GGG - chr7_3:85681386-85681405 None:intergenic 40.0%
TAGGCATCTGCATAAGCAAA+TGG - chr7_3:85681387-85681406 None:intergenic 40.0%
CTGAGCTTGCATCTTATCAT+AGG - chr7_3:85681406-85681425 None:intergenic 40.0%
TTCAATACAGTTGCTGGAGT+TGG + chr7_3:85681571-85681590 Msa1132820:intron 40.0%
CACACACAGATTCTGGTAAT+CGG - chr7_3:85681702-85681721 None:intergenic 40.0%
ACAATTCCACACACAGATTC+TGG - chr7_3:85681709-85681728 None:intergenic 40.0%
! ACGGCACAATTTTCCAGAAA+TGG - chr7_3:85682054-85682073 None:intergenic 40.0%
AGTAACCATAGCAAGCAAGG+TGG + chr7_3:85674530-85674549 Msa1132820:five_prime_UTR 45.0%
! TCTAACCACCTTGCTTGCTA+TGG - chr7_3:85674538-85674557 None:intergenic 45.0%
AGAACCAAATCATGGAGCAG+AGG + chr7_3:85674665-85674684 Msa1132820:CDS 45.0%
TTTGCCTCTGCTCCATGATT+TGG - chr7_3:85674672-85674691 None:intergenic 45.0%
! TGTATTGGTCCAGGTCCTAT+TGG + chr7_3:85674704-85674723 Msa1132820:CDS 45.0%
GTCCTATTGGTCCTGTTGAT+TGG + chr7_3:85674717-85674736 Msa1132820:CDS 45.0%
ACCCAATCAACAGGACCAAT+AGG - chr7_3:85674722-85674741 None:intergenic 45.0%
TGATTGATGTAGGACCCAGA+AGG + chr7_3:85674819-85674838 Msa1132820:intron 45.0%
TAAACTCAAGCCTAGCAAGG+TGG - chr7_3:85674869-85674888 None:intergenic 45.0%
GACGACGTTCTTTCTCTTCA+CGG - chr7_3:85674944-85674963 None:intergenic 45.0%
! TGAGGTCTTGTGGAGTATCA+GGG - chr7_3:85675460-85675479 None:intergenic 45.0%
! ATGAGGTCTTGTGGAGTATC+AGG - chr7_3:85675461-85675480 None:intergenic 45.0%
CTTACTTGACACTGAAGCTC+AGG + chr7_3:85675487-85675506 Msa1132820:CDS 45.0%
ATGATTTCTGCAGCTTACGG+AGG + chr7_3:85675784-85675803 Msa1132820:intron 45.0%
AAGGCCATACAAGAAGGAAC+AGG + chr7_3:85675836-85675855 Msa1132820:CDS 45.0%
CTACCTCCGTCCCTAATTAT+AGG + chr7_3:85676037-85676056 Msa1132820:intron 45.0%
AAGGGCCCTATAATTAGGGA+CGG - chr7_3:85676046-85676065 None:intergenic 45.0%
! GGTCTTATAATTAGGGACGG+AGG + chr7_3:85676305-85676324 Msa1132820:intron 45.0%
!! CTGATTTGGTGCTGATCTGT+TGG - chr7_3:85676418-85676437 None:intergenic 45.0%
TACCAGCATCAATTTGAGGG+GGG - chr7_3:85676478-85676497 None:intergenic 45.0%
ATTATGACGCTGACGTGTCA+TGG + chr7_3:85676529-85676548 Msa1132820:intron 45.0%
TGAACTGATGTAGACACGTG+AGG + chr7_3:85676575-85676594 Msa1132820:intron 45.0%
TTCGTTCGCTCATGGTATAC+AGG + chr7_3:85676659-85676678 Msa1132820:intron 45.0%
TTATCAGCATGCAGTGGAGT+TGG + chr7_3:85676710-85676729 Msa1132820:intron 45.0%
CGAGGACTTCTTTCAGAACT+TGG - chr7_3:85676752-85676771 None:intergenic 45.0%
!! CAGCGTGCTCTGAGATTATT+TGG - chr7_3:85676778-85676797 None:intergenic 45.0%
! AGCATACAGCGATGCTGATT+GGG - chr7_3:85676936-85676955 None:intergenic 45.0%
AAGCATACAGCGATGCTGAT+TGG - chr7_3:85676937-85676956 None:intergenic 45.0%
GCAGAAAGATGCAAGTGTCT+CGG + chr7_3:85677037-85677056 Msa1132820:intron 45.0%
AGAGATATCGGGTCTAGTGA+TGG + chr7_3:85677096-85677115 Msa1132820:intron 45.0%
TATCGGGTCTAGTGATGGTT+AGG + chr7_3:85677101-85677120 Msa1132820:intron 45.0%
GTAAAGCTACGACGAGATGA+GGG - chr7_3:85677181-85677200 None:intergenic 45.0%
TGTAAAGCTACGACGAGATG+AGG - chr7_3:85677182-85677201 None:intergenic 45.0%
CAGGATCTTATTCACATGGC+TGG - chr7_3:85677247-85677266 None:intergenic 45.0%
GTGGACGACATTGTCATTAC+CGG - chr7_3:85677415-85677434 None:intergenic 45.0%
GAGATGGATCATAGCTGCTT+TGG + chr7_3:85677482-85677501 Msa1132820:intron 45.0%
TAAAACAGGCACCTAGAGTG+TGG - chr7_3:85677549-85677568 None:intergenic 45.0%
!! CTTCTTCTTTGAGGTCACCA+TGG + chr7_3:85677644-85677663 Msa1132820:intron 45.0%
! TTTGAGGTCACCATGGAGAA+AGG + chr7_3:85677651-85677670 Msa1132820:intron 45.0%
!! ACAGTAGTCATTTTGGCCAC+AGG + chr7_3:85677739-85677758 Msa1132820:intron 45.0%
! TGGATCAATAGAGCGCTACA+AGG - chr7_3:85677827-85677846 None:intergenic 45.0%
CTACCAAGAGGCTTAACAGA+TGG + chr7_3:85677880-85677899 Msa1132820:intron 45.0%
!! GCTGGTTCTGGTTGAAATGT+CGG + chr7_3:85678108-85678127 Msa1132820:intron 45.0%
AAATGTCGGATCAGCATCCA+GGG + chr7_3:85678122-85678141 Msa1132820:intron 45.0%
ATCAGCATCCAGGGATTGAT+CGG + chr7_3:85678131-85678150 Msa1132820:intron 45.0%
CGTCTTTGATAGACCAAGAG+AGG + chr7_3:85678177-85678196 Msa1132820:intron 45.0%
GGCTATTCAGCCCATCAAAA+AGG - chr7_3:85678369-85678388 Msa1132830:intron 45.0%
GAGAAGGCAAGCGGTTAATT+AGG + chr7_3:85678541-85678560 Msa1132820:intron 45.0%
! CATTTGTACCCTCTCGGTTT+TGG - chr7_3:85678593-85678612 Msa1132830:intron 45.0%
TACGGACCACATCAAGAAGA+TGG + chr7_3:85678628-85678647 Msa1132820:intron 45.0%
TTTACGTTCTGACAATGGGG+GGG - chr7_3:85678763-85678782 Msa1132830:intron 45.0%
GCCAACTGAAATGAGGTTAC+TGG + chr7_3:85679349-85679368 Msa1132820:intron 45.0%
! ATGAGGTTACTGGTTAGACC+GGG + chr7_3:85679359-85679378 Msa1132820:intron 45.0%
! ACCATTTCAGGTGTCAACGT+TGG + chr7_3:85679620-85679639 Msa1132820:intron 45.0%
TGCAGCTACTGCAAACAAGA+AGG - chr7_3:85679764-85679783 Msa1132830:CDS 45.0%
! TGTTTCTGCTGCAAAGGTCT+TGG - chr7_3:85679818-85679837 Msa1132830:intron 45.0%
GACCTTTGCAGCAGAAACAT+TGG + chr7_3:85679819-85679838 Msa1132820:intron 45.0%
! GTCCAATGTTTCTGCTGCAA+AGG - chr7_3:85679824-85679843 Msa1132830:intron 45.0%
CAGCACAAGGAAAACCTAGA+GGG - chr7_3:85679862-85679881 Msa1132830:CDS 45.0%
TGCAGCACAAGGAAAACCTA+TGG - chr7_3:85679864-85679883 Msa1132830:CDS 45.0%
GAAATCTGCTTCCCTTTCTG+TGG - chr7_3:85679918-85679937 Msa1132830:CDS 45.0%
CAAGTTATGGCGTGGATCAT+AGG - chr7_3:85680364-85680383 Msa1132830:intron 45.0%
AAGATGCACAAGTTATGGCG+TGG - chr7_3:85680372-85680391 Msa1132830:intron 45.0%
! CGCCATAACTTGTGCATCTT+TGG + chr7_3:85680372-85680391 Msa1132820:intron 45.0%
GGCCAAAGATGCACAAGTTA+TGG - chr7_3:85680377-85680396 Msa1132830:intron 45.0%
!! GAGTTGTTTTGTTAGGAGCG+GGG + chr7_3:85680422-85680441 Msa1132820:intron 45.0%
TGTCAAAGGCAAGGAGCTTT+GGG - chr7_3:85680467-85680486 Msa1132830:CDS 45.0%
TTGTCAAAGGCAAGGAGCTT+TGG - chr7_3:85680468-85680487 Msa1132830:CDS 45.0%
GAGACTTGGCAAGAGATTGA+GGG + chr7_3:85680645-85680664 Msa1132820:intron 45.0%
!! CTGATTTGGTGCTGATCTGT+TGG - chr7_3:85676418-85676437 None:intergenic 45.0%
ATGCAAGCTTACTCCTTGCT+CGG + chr7_3:85681355-85681374 Msa1132820:intron 45.0%
AGCTCAGCTCATAAAAGCCA+AGG + chr7_3:85681419-85681438 Msa1132820:CDS 45.0%
CGATTACCAGAATCTGTGTG+TGG + chr7_3:85681700-85681719 Msa1132820:intron 45.0%
GAAGCAAGCTGCAGAATACA+TGG + chr7_3:85681952-85681971 Msa1132820:intron 45.0%
AATACATGGAGAAGCTCCGT+GGG + chr7_3:85681966-85681985 Msa1132820:CDS 45.0%
TGTATTTGAGAACAGCCCCA+CGG - chr7_3:85681985-85682004 None:intergenic 45.0%
TCAACAGGACCAATAGGACC+TGG - chr7_3:85674716-85674735 None:intergenic 50.0%
! TAGGACCCAGAAGGTGTACT+AGG + chr7_3:85674828-85674847 Msa1132820:intron 50.0%
CTAGCAAGGTGGCCAGTATT+GGG - chr7_3:85674858-85674877 None:intergenic 50.0%
TTCACGGACTTGACGCTCAA+AGG - chr7_3:85674928-85674947 None:intergenic 50.0%
! TTGGAGAGGGCGTGAAACTT+TGG + chr7_3:85675318-85675337 Msa1132820:intron 50.0%
GGAGGATAGATTGACTGAGC+TGG + chr7_3:85675802-85675821 Msa1132820:CDS 50.0%
GGATAGATTGACTGAGCTGG+AGG + chr7_3:85675805-85675824 Msa1132820:CDS 50.0%
!! TGAGCTGGAGGCTTTAGAGA+AGG + chr7_3:85675817-85675836 Msa1132820:CDS 50.0%
ATCCCCCCTCAAATTGATGC+TGG + chr7_3:85676473-85676492 Msa1132820:intron 50.0%
TGAGCGAACGAAGCACATAG+AGG - chr7_3:85676651-85676670 None:intergenic 50.0%
CTATGTGCTTCGTTCGCTCA+TGG + chr7_3:85676651-85676670 Msa1132820:intron 50.0%
CAAGGAAGTCTACGACTGGA+TGG - chr7_3:85676898-85676917 None:intergenic 50.0%
GACACAAGGAAGTCTACGAC+TGG - chr7_3:85676902-85676921 None:intergenic 50.0%
GTCGTAGACTTCCTTGTGTC+TGG + chr7_3:85676902-85676921 Msa1132820:intron 50.0%
AGTTGTATTGCGGCACCTGT+CGG + chr7_3:85676959-85676978 Msa1132820:intron 50.0%
! ACTTGCTAGCCACTTCCAAG+CGG - chr7_3:85676997-85677016 None:intergenic 50.0%
AGTGTCAACTGGAGCTGCAT+TGG + chr7_3:85677216-85677235 Msa1132820:intron 50.0%
AACAGCCTCTTGATCTGAGC+CGG + chr7_3:85677393-85677412 Msa1132820:intron 50.0%
!! CATTACCGGCTCAGATCAAG+AGG - chr7_3:85677401-85677420 None:intergenic 50.0%
! GGTAATGAGGGCATACCAGT+TGG + chr7_3:85677607-85677626 Msa1132820:intron 50.0%
!! CATTTTGGCCACAGGTGCAA+AGG + chr7_3:85677747-85677766 Msa1132820:intron 50.0%
! AGAGCGCTACAAGGCTAGAT+TGG - chr7_3:85677818-85677837 None:intergenic 50.0%
CCTCCATCTGTTAAGCCTCT+TGG - chr7_3:85677886-85677905 None:intergenic 50.0%
CCAAGAGGCTTAACAGATGG+AGG + chr7_3:85677883-85677902 Msa1132820:intron 50.0%
GGCTTAACAGATGGAGGACA+TGG + chr7_3:85677889-85677908 Msa1132820:intron 50.0%
AGCTGAACTTCTGGCACTAG+AGG - chr7_3:85677938-85677957 None:intergenic 50.0%
CGTAAAGCCCCAGAGAAGTA+TGG - chr7_3:85678063-85678082 None:intergenic 50.0%
ATCGCGAGTACTACGACGTA+AGG + chr7_3:85678083-85678102 Msa1132820:intron 50.0%
TCGCGAGTACTACGACGTAA+GGG + chr7_3:85678084-85678103 Msa1132820:intron 50.0%
GAAATGTCGGATCAGCATCC+AGG + chr7_3:85678121-85678140 Msa1132820:intron 50.0%
TCAGCATCCAGGGATTGATC+GGG + chr7_3:85678132-85678151 Msa1132820:intron 50.0%
ACAAACGCGTCAACCTCTCT+TGG - chr7_3:85678193-85678212 Msa1132830:CDS 50.0%
TGCTTCACACCAAAACCGAG+AGG + chr7_3:85678581-85678600 Msa1132820:intron 50.0%
GCTTCACACCAAAACCGAGA+GGG + chr7_3:85678582-85678601 Msa1132820:intron 50.0%
!! TTTCCGCTACGCCGTTTTGT+TGG + chr7_3:85678661-85678680 Msa1132820:intron 50.0%
!! TTCCGCTACGCCGTTTTGTT+GGG + chr7_3:85678662-85678681 Msa1132820:intron 50.0%
CCTTCCACTCCCCAACAAAA+CGG - chr7_3:85678675-85678694 Msa1132830:intron 50.0%
TCAGGGAAGATGATCGCGAA+GGG - chr7_3:85679263-85679282 Msa1132830:intron 50.0%
ATCAGGGAAGATGATCGCGA+AGG - chr7_3:85679264-85679283 Msa1132830:intron 50.0%
GCCCCAGAGTCAAAATACCA+AGG + chr7_3:85679530-85679549 Msa1132820:intron 50.0%
GCCAACGTTGACACCTGAAA+TGG - chr7_3:85679624-85679643 Msa1132830:CDS 50.0%
GTCAACGTTGGCACAGGATT+AGG + chr7_3:85679632-85679651 Msa1132820:intron 50.0%
TGAAGTAGAAGAACCGGCAG+AGG + chr7_3:85679679-85679698 Msa1132820:intron 50.0%
GCTGTTGCATTTCTCCTTGG+TGG + chr7_3:85679710-85679729 Msa1132820:intron 50.0%
! TTTCTCCTTGGTGGCCTGAT+TGG + chr7_3:85679719-85679738 Msa1132820:intron 50.0%
AATGTCCAATCAGGCCACCA+AGG - chr7_3:85679727-85679746 Msa1132830:CDS 50.0%
TTACTCATGTCACGCCCTCT+AGG + chr7_3:85679845-85679864 Msa1132820:intron 50.0%
GCAGCACAAGGAAAACCTAG+AGG - chr7_3:85679863-85679882 Msa1132830:CDS 50.0%
TGCTGCATACGCCACAGAAA+GGG + chr7_3:85679904-85679923 Msa1132820:intron 50.0%
GATCCATGGTTGTCTGAGTG+AGG + chr7_3:85679942-85679961 Msa1132820:intron 50.0%
TCTCCTCACTCAGACAACCA+TGG - chr7_3:85679948-85679967 Msa1132830:CDS 50.0%
ACCTGCGAGCACTATTGTTC+TGG + chr7_3:85680254-85680273 Msa1132820:intron 50.0%
TTCCCACATCTTAGCTGCTG+TGG + chr7_3:85680297-85680316 Msa1132820:intron 50.0%
ATCTTAGCTGCTGTGGCGAA+GGG + chr7_3:85680304-85680323 Msa1132820:intron 50.0%
TGCATCTTTGGCCTCCCATT+TGG + chr7_3:85680384-85680403 Msa1132820:intron 50.0%
GGATGCATATGCCAAATGGG+AGG - chr7_3:85680398-85680417 Msa1132830:CDS 50.0%
!! GAGCTTTGGGGTCATGTTGA+CGG - chr7_3:85680454-85680473 Msa1132830:CDS 50.0%
GTCAAAGGCAAGGAGCTTTG+GGG - chr7_3:85680466-85680485 Msa1132830:CDS 50.0%
! CATGGTGCTAGACATGATGC+TGG + chr7_3:85680567-85680586 Msa1132820:intron 50.0%
CGAGACTTGGCAAGAGATTG+AGG + chr7_3:85680644-85680663 Msa1132820:intron 50.0%
GTCGACACCGTACCATTTCA+AGG + chr7_3:85681262-85681281 Msa1132820:intron 50.0%
! TGCAGCTTGCTTCTGCAACA+AGG - chr7_3:85681945-85681964 None:intergenic 50.0%
GAATACATGGAGAAGCTCCG+TGG + chr7_3:85681965-85681984 Msa1132820:CDS 50.0%
ATACATGGAGAAGCTCCGTG+GGG + chr7_3:85681967-85681986 Msa1132820:CDS 50.0%
! ACCCAGAAGGTGTACTAGGC+CGG + chr7_3:85674832-85674851 Msa1132820:CDS 55.0%
CCTAGCAAGGTGGCCAGTAT+TGG - chr7_3:85674859-85674878 None:intergenic 55.0%
CCAATACTGGCCACCTTGCT+AGG + chr7_3:85674856-85674875 Msa1132820:CDS 55.0%
GGCCCTATAATTAGGGACGG+AGG - chr7_3:85676043-85676062 None:intergenic 55.0%
GCATGCAGTGGAGTTGGATG+TGG + chr7_3:85676716-85676735 Msa1132820:intron 55.0%
! TACAGCGATGCTGATTGGGC+TGG - chr7_3:85676932-85676951 None:intergenic 55.0%
! CGGGGTCTTTTCTTTCCGAC+AGG - chr7_3:85676977-85676996 None:intergenic 55.0%
CGGAAAGAAAAGACCCCGCT+TGG + chr7_3:85676979-85676998 Msa1132820:intron 55.0%
GAAAAGACCCCGCTTGGAAG+TGG + chr7_3:85676985-85677004 Msa1132820:intron 55.0%
TTGCTAGCCACTTCCAAGCG+GGG - chr7_3:85676995-85677014 None:intergenic 55.0%
CTTGCTAGCCACTTCCAAGC+GGG - chr7_3:85676996-85677015 None:intergenic 55.0%
!! ACCTCCATGGGAGTGTCAAC+TGG + chr7_3:85677205-85677224 Msa1132820:intron 55.0%
TCCAGTTGACACTCCCATGG+AGG - chr7_3:85677209-85677228 None:intergenic 55.0%
AGCTCCAGTTGACACTCCCA+TGG - chr7_3:85677212-85677231 None:intergenic 55.0%
TGAGGAGACCTTTGCACCTG+TGG - chr7_3:85677758-85677777 None:intergenic 55.0%
CGCGAGTACTACGACGTAAG+GGG + chr7_3:85678085-85678104 Msa1132820:intron 55.0%
GCGAGTACTACGACGTAAGG+GGG + chr7_3:85678086-85678105 Msa1132820:intron 55.0%
CATCCAGGGATTGATCGGGA+GGG + chr7_3:85678136-85678155 Msa1132820:intron 55.0%
!! GTGAGTTTGGTGCGTTCGTG+TGG + chr7_3:85678417-85678436 Msa1132820:intron 55.0%
!! AGTTTGGTGCGTTCGTGTGG+CGG + chr7_3:85678420-85678439 Msa1132820:intron 55.0%
!! TCCGCTACGCCGTTTTGTTG+GGG + chr7_3:85678663-85678682 Msa1132820:intron 55.0%
TCCCCAACAAAACGGCGTAG+CGG - chr7_3:85678667-85678686 Msa1132830:intron 55.0%
!! TACGCCGTTTTGTTGGGGAG+TGG + chr7_3:85678668-85678687 Msa1132820:intron 55.0%
!! CCGTTTTGTTGGGGAGTGGA+AGG + chr7_3:85678672-85678691 Msa1132820:intron 55.0%
ATCGCGAAGGGGCCTAAAGT+TGG - chr7_3:85679251-85679270 Msa1132830:intron 55.0%
CAGGGAAGATGATCGCGAAG+GGG - chr7_3:85679262-85679281 Msa1132830:intron 55.0%
TCAGGTGTCAACGTTGGCAC+AGG + chr7_3:85679626-85679645 Msa1132820:intron 55.0%
ACAGCTTTCACTGCCTCTGC+CGG - chr7_3:85679695-85679714 Msa1132830:CDS 55.0%
CCTATGGCGTATGCAGCACA+AGG - chr7_3:85679875-85679894 Msa1132830:CDS 55.0%
CCTTGTGCTGCATACGCCAT+AGG + chr7_3:85679872-85679891 Msa1132820:intron 55.0%
TCTGTGGCGTATGCAGCACA+AGG - chr7_3:85679902-85679921 Msa1132830:CDS 55.0%
GTGCTGCATACGCCACAGAA+AGG + chr7_3:85679903-85679922 Msa1132820:intron 55.0%
GCCAGAACAATAGTGCTCGC+AGG - chr7_3:85680258-85680277 Msa1132830:intron 55.0%
CGCCACAGCAGCTAAGATGT+GGG - chr7_3:85680302-85680321 Msa1132830:intron 55.0%
TCGCCACAGCAGCTAAGATG+TGG - chr7_3:85680303-85680322 Msa1132830:intron 55.0%
CATCTTAGCTGCTGTGGCGA+AGG + chr7_3:85680303-85680322 Msa1132820:intron 55.0%
! TGGCGAAGGGTCTGAGATTG+AGG + chr7_3:85680317-85680336 Msa1132820:intron 55.0%
CTCTAGCTGGAATGCCCATG+TGG + chr7_3:85680492-85680511 Msa1132820:intron 55.0%
CAAATGGGAGCAACCGAGCA+AGG - chr7_3:85681371-85681390 None:intergenic 55.0%
! AAGTGCACATGGTGCCAACC+AGG + chr7_3:85681649-85681668 Msa1132820:CDS 55.0%
GCCGGCCTAGTACACCTTCT+GGG - chr7_3:85674836-85674855 None:intergenic 60.0%
GTACTAGGCCGGCCCAATAC+TGG + chr7_3:85674843-85674862 Msa1132820:CDS 60.0%
! CAAGGTGGCCAGTATTGGGC+CGG - chr7_3:85674854-85674873 None:intergenic 60.0%
CTCAGAGCACGCTGCAGACA+TGG + chr7_3:85676784-85676803 Msa1132820:intron 60.0%
AGCACGCTGCAGACATGGAG+CGG + chr7_3:85676789-85676808 Msa1132820:intron 60.0%
GGGCTGGATGTCCAGACACA+AGG - chr7_3:85676916-85676935 None:intergenic 60.0%
GTACTACGACGTAAGGGGGC+TGG + chr7_3:85678090-85678109 Msa1132820:intron 60.0%
GCATCCAGGGATTGATCGGG+AGG + chr7_3:85678135-85678154 Msa1132820:intron 60.0%
ACTCCCTCCCGATCAATCCC+TGG - chr7_3:85678142-85678161 Msa1132830:CDS 60.0%
AGGGATTGATCGGGAGGGAG+TGG + chr7_3:85678141-85678160 Msa1132820:intron 60.0%
GATTGATCGGGAGGGAGTGG+TGG + chr7_3:85678144-85678163 Msa1132820:intron 60.0%
CAGAGCTACTGTCCCCTCCT+TGG - chr7_3:85680008-85680027 Msa1132830:CDS 60.0%
GGCCGGCCTAGTACACCTTC+TGG - chr7_3:85674837-85674856 None:intergenic 65.0%
!! CGACGTAAGGGGGCTGGTTC+TGG + chr7_3:85678096-85678115 Msa1132820:intron 65.0%
GGAGGGAGTGGTGGCACAGT+TGG + chr7_3:85678153-85678172 Msa1132820:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 85674519 85682235 85674519 ID=Msa1132820;Name=Msa1132820
chr7_3 mRNA 85674519 85682235 85674519 ID=Msa1132820-mRNA-1;Parent=Msa1132820;Name=Msa1132820-mRNA-1;_AED=0.16;_eAED=0.16;_QI=80|1|1|1|0.85|0.75|8|220|252
chr7_3 exon 85674519 85674739 85674519 ID=Msa1132820-mRNA-1:exon:25695;Parent=Msa1132820-mRNA-1
chr7_3 exon 85674831 85674977 85674831 ID=Msa1132820-mRNA-1:exon:25696;Parent=Msa1132820-mRNA-1
chr7_3 exon 85675446 85675543 85675446 ID=Msa1132820-mRNA-1:exon:25697;Parent=Msa1132820-mRNA-1
chr7_3 exon 85675642 85675714 85675642 ID=Msa1132820-mRNA-1:exon:25698;Parent=Msa1132820-mRNA-1
chr7_3 exon 85675797 85675857 85675797 ID=Msa1132820-mRNA-1:exon:25699;Parent=Msa1132820-mRNA-1
chr7_3 exon 85681400 85681485 85681400 ID=Msa1132820-mRNA-1:exon:25700;Parent=Msa1132820-mRNA-1
chr7_3 exon 85681581 85681670 85681581 ID=Msa1132820-mRNA-1:exon:25701;Parent=Msa1132820-mRNA-1
chr7_3 exon 85681953 85682235 85681953 ID=Msa1132820-mRNA-1:exon:25702;Parent=Msa1132820-mRNA-1
chr7_3 five_prime_UTR 85674519 85674598 85674519 ID=Msa1132820-mRNA-1:five_prime_utr;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85674599 85674739 85674599 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85674831 85674977 85674831 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85675446 85675543 85675446 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85675642 85675714 85675642 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85675797 85675857 85675797 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85681400 85681485 85681400 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85681581 85681670 85681581 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 CDS 85681953 85682015 85681953 ID=Msa1132820-mRNA-1:cds;Parent=Msa1132820-mRNA-1
chr7_3 three_prime_UTR 85682016 85682235 85682016 ID=Msa1132820-mRNA-1:three_prime_utr;Parent=Msa1132820-mRNA-1
Gene Sequence

>Msa1132820

ATGGCTACGCTTAACTTTGGCATAGCCACAACAAGAAGTTTGAATGCTACTTCTGGTTTTCGAACTAGAACCAAATCATGGAGCAGAGGCAAATCCACTATTGTGTGTATTGGTCCAGGTCCTATTGGTCCTGTTGATTGGGACCCAGAAGGTGTACTAGGCCGGCCCAATACTGGCCACCTTGCTAGGCTTGAGTTTAAGAGACGTCTTGAGAAAGATTCTGAAGCTCGAGAAGCCTTTGAGCGTCAAGTCCGTGAAGAGAAAGAACGTCGTCGAGCCCTTCGTGATTCTCGTGATGTCCCTGATACTCCACAAGACCTCATTGAATACTTACTTGACACTGAAGCTCAGGAGATTGAATTTGAGATTGCAAGAATGAGACCACGATTAAACGACGAATTCTTTTTGGCATTAAAATCCGAGTTAGGACAACTTCGATTTGCTGTTAACAAAACGCAGCTTACGGAGGATAGATTGACTGAGCTGGAGGCTTTAGAGAAGGCCATACAAGAAGGAACAGATGCCTATGATAAGATGCAAGCTCAGCTCATAAAAGCCAAGGAAAACCTAACCAAAATCTTGACATCAAAGGATGTCAAAACAACTTTGCTGGAGTTGGTTGAGCGCAACGAGATTAATCGATCATTGTTGGCCCTTCTTGATGAAAACATATCAAGTGCACATGGTGCCAACCAGAAGCAAGCTGCAGAATACATGGAGAAGCTCCGTGGGGCTGTTCTCAAATACATTACAGTTTAG

Protein sequence

>Msa1132820

MATLNFGIATTRSLNATSGFRTRTKSWSRGKSTIVCIGPGPIGPVDWDPEGVLGRPNTGHLARLEFKRRLEKDSEAREAFERQVREEKERRRALRDSRDVPDTPQDLIEYLLDTEAQEIEFEIARMRPRLNDEFFLALKSELGQLRFAVNKTQLTEDRLTELEALEKAIQEGTDAYDKMQAQLIKAKENLTKILTSKDVKTTLLELVERNEINRSLLALLDENISSAHGANQKQAAEYMEKLRGAVLKYITV*