Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443410 | RHN67997.1 | 95.187 | 187 | 9 | 0 | 1 | 187 | 1 | 187 | 1.16e-125 | 361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443410 | sp|Q9STG6|DUT_ARATH | 87.234 | 141 | 18 | 0 | 47 | 187 | 26 | 166 | 8.86e-86 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443410 | A0A396IYG6 | 95.187 | 187 | 9 | 0 | 1 | 187 | 1 | 187 | 5.55e-126 | 361 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0443410 | 0.812277 | 4.596724e-51 | -8.615850e-47 |
| Msa0005020 | Msa0443410 | 0.800559 | 1.361722e-48 | -8.615850e-47 |
| Msa0016040 | Msa0443410 | 0.809727 | 1.640108e-50 | -8.615850e-47 |
| Msa0025580 | Msa0443410 | 0.812179 | 4.829151e-51 | -8.615850e-47 |
| Msa0032980 | Msa0443410 | 0.842042 | 3.292792e-58 | -8.615850e-47 |
| Msa0035140 | Msa0443410 | 0.813286 | 2.764712e-51 | -8.615850e-47 |
| Msa0037740 | Msa0443410 | 0.800639 | 1.311165e-48 | -8.615850e-47 |
| Msa0050660 | Msa0443410 | 0.811411 | 7.095018e-51 | -8.615850e-47 |
| Msa0050700 | Msa0443410 | 0.808838 | 2.543873e-50 | -8.615850e-47 |
| Msa0050790 | Msa0443410 | 0.802046 | 6.753847e-49 | -8.615850e-47 |
| Msa0053070 | Msa0443410 | 0.830842 | 2.339135e-55 | -8.615850e-47 |
| Msa0062340 | Msa0443410 | 0.810149 | 1.330586e-50 | -8.615850e-47 |
| Msa0067380 | Msa0443410 | 0.809607 | 1.740498e-50 | -8.615850e-47 |
| Msa0073120 | Msa0443410 | 0.812554 | 3.999903e-51 | -8.615850e-47 |
| Msa0075530 | Msa0443410 | 0.823197 | 1.576672e-53 | -8.615850e-47 |
| Msa0091350 | Msa0443410 | 0.837067 | 6.468579e-57 | -8.615850e-47 |
| Msa0093860 | Msa0443410 | 0.825544 | 4.424255e-54 | -8.615850e-47 |
| Msa0098410 | Msa0443410 | 0.838026 | 3.672453e-57 | -8.615850e-47 |
| Msa0112670 | Msa0443410 | 0.807807 | 4.221057e-50 | -8.615850e-47 |
| Msa0115550 | Msa0443410 | 0.831821 | 1.343433e-55 | -8.615850e-47 |
| Msa0121330 | Msa0443410 | 0.823720 | 1.189993e-53 | -8.615850e-47 |
| Msa0122330 | Msa0443410 | 0.804208 | 2.412226e-49 | -8.615850e-47 |
| Msa0123320 | Msa0443410 | 0.800050 | 1.728526e-48 | -8.615850e-47 |
| Msa0127340 | Msa0443410 | 0.821962 | 3.054577e-53 | -8.615850e-47 |
| Msa0127680 | Msa0443410 | 0.825418 | 4.738831e-54 | -8.615850e-47 |
| Msa0128570 | Msa0443410 | 0.815056 | 1.124044e-51 | -8.615850e-47 |
| Msa0140380 | Msa0443410 | 0.821351 | 4.228767e-53 | -8.615850e-47 |
| Msa0146650 | Msa0443410 | 0.817592 | 3.044425e-52 | -8.615850e-47 |
| Msa0159590 | Msa0443410 | 0.821075 | 4.897011e-53 | -8.615850e-47 |
| Msa0160160 | Msa0443410 | 0.828496 | 8.704102e-55 | -8.615850e-47 |
| Msa0160170 | Msa0443410 | 0.833178 | 6.190477e-56 | -8.615850e-47 |
| Msa0160290 | Msa0443410 | 0.801493 | 8.772075e-49 | -8.615850e-47 |
| Msa0165830 | Msa0443410 | 0.849650 | 2.822130e-60 | -8.615850e-47 |
| Msa0166170 | Msa0443410 | 0.830906 | 2.256117e-55 | -8.615850e-47 |
| Msa0168050 | Msa0443410 | 0.815519 | 8.870797e-52 | -8.615850e-47 |
| Msa0170070 | Msa0443410 | 0.800245 | 1.577966e-48 | -8.615850e-47 |
| Msa0174650 | Msa0443410 | 0.813648 | 2.300865e-51 | -8.615850e-47 |
| Msa0190730 | Msa0443410 | 0.811861 | 5.665069e-51 | -8.615850e-47 |
| Msa0200050 | Msa0443410 | 0.821404 | 4.110744e-53 | -8.615850e-47 |
| Msa0209980 | Msa0443410 | 0.802984 | 4.327827e-49 | -8.615850e-47 |
| Msa0232760 | Msa0443410 | 0.824049 | 9.961883e-54 | -8.615850e-47 |
| Msa0233020 | Msa0443410 | 0.807125 | 5.888510e-50 | -8.615850e-47 |
| Msa0233070 | Msa0443410 | 0.800472 | 1.418701e-48 | -8.615850e-47 |
| Msa0367520 | Msa0443410 | 0.897419 | 1.431649e-76 | -8.615850e-47 |
| Msa0368860 | Msa0443410 | 0.825103 | 5.625558e-54 | -8.615850e-47 |
| Msa0373170 | Msa0443410 | 0.810284 | 1.244157e-50 | -8.615850e-47 |
| Msa0373500 | Msa0443410 | 0.816905 | 4.345681e-52 | -8.615850e-47 |
| Msa0373590 | Msa0443410 | 0.832962 | 7.004890e-56 | -8.615850e-47 |
| Msa0382740 | Msa0443410 | 0.822037 | 2.934286e-53 | -8.615850e-47 |
| Msa0382770 | Msa0443410 | 0.832189 | 1.089270e-55 | -8.615850e-47 |
| Msa0383000 | Msa0443410 | 0.812217 | 4.737805e-51 | -8.615850e-47 |
| Msa0389950 | Msa0443410 | 0.804003 | 2.661038e-49 | -8.615850e-47 |
| Msa0412130 | Msa0443410 | 0.801438 | 9.005989e-49 | -8.615850e-47 |
| Msa0415140 | Msa0443410 | 0.854823 | 9.523402e-62 | -8.615850e-47 |
| Msa0416160 | Msa0443410 | 0.829143 | 6.071740e-55 | -8.615850e-47 |
| Msa0420670 | Msa0443410 | 0.800483 | 1.411114e-48 | -8.615850e-47 |
| Msa0421130 | Msa0443410 | 0.825217 | 5.286273e-54 | -8.615850e-47 |
| Msa0421750 | Msa0443410 | 0.822079 | 2.870270e-53 | -8.615850e-47 |
| Msa0432010 | Msa0443410 | 0.820304 | 7.362320e-53 | -8.615850e-47 |
| Msa0433150 | Msa0443410 | 0.801420 | 9.078910e-49 | -8.615850e-47 |
| Msa0433760 | Msa0443410 | 0.823589 | 1.277061e-53 | -8.615850e-47 |
| Msa0443410 | Msa0447750 | 0.811331 | 7.386065e-51 | -8.615850e-47 |
| Msa0443410 | Msa0456670 | 0.808086 | 3.681363e-50 | -8.615850e-47 |
| Msa0443410 | Msa0462780 | 0.820895 | 5.386398e-53 | -8.615850e-47 |
| Msa0443410 | Msa0466520 | 0.850044 | 2.190060e-60 | -8.615850e-47 |
| Msa0443410 | Msa0466880 | 0.833417 | 5.396413e-56 | -8.615850e-47 |
| Msa0443410 | Msa0467690 | 0.816489 | 5.387399e-52 | -8.615850e-47 |
| Msa0443410 | Msa0468700 | 0.807416 | 5.107993e-50 | -8.615850e-47 |
| Msa0443410 | Msa0476280 | 0.803267 | 3.781916e-49 | -8.615850e-47 |
| Msa0443410 | Msa0477630 | 0.821872 | 3.205499e-53 | -8.615850e-47 |
| Msa0443410 | Msa0480730 | 0.814162 | 1.772925e-51 | -8.615850e-47 |
| Msa0443410 | Msa0481890 | 0.826893 | 2.112888e-54 | -8.615850e-47 |
| Msa0443410 | Msa0514020 | 0.823155 | 1.613154e-53 | -8.615850e-47 |
| Msa0443410 | Msa0514580 | 0.804704 | 1.900731e-49 | -8.615850e-47 |
| Msa0443410 | Msa0520870 | 0.828907 | 6.923615e-55 | -8.615850e-47 |
| Msa0443410 | Msa0521680 | 0.834904 | 2.288741e-56 | -8.615850e-47 |
| Msa0443410 | Msa0524320 | 0.828102 | 1.083349e-54 | -8.615850e-47 |
| Msa0443410 | Msa0524430 | 0.829412 | 5.223260e-55 | -8.615850e-47 |
| Msa0443410 | Msa0524800 | 0.810849 | 9.394757e-51 | -8.615850e-47 |
| Msa0443410 | Msa0525000 | 0.822928 | 1.821964e-53 | -8.615850e-47 |
| Msa0443410 | Msa0531960 | 0.800893 | 1.164083e-48 | -8.615850e-47 |
| Msa0443410 | Msa0534100 | 0.839464 | 1.560532e-57 | -8.615850e-47 |
| Msa0443410 | Msa0548000 | 0.808476 | 3.039418e-50 | -8.615850e-47 |
| Msa0443410 | Msa0550590 | 0.844812 | 5.993631e-59 | -8.615850e-47 |
| Msa0443410 | Msa0554300 | 0.812112 | 4.995351e-51 | -8.615850e-47 |
| Msa0443410 | Msa0561560 | 0.860342 | 2.208845e-63 | -8.615850e-47 |
| Msa0443410 | Msa0563740 | 0.840832 | 6.856968e-58 | -8.615850e-47 |
| Msa0443410 | Msa0563900 | 0.800864 | 1.179843e-48 | -8.615850e-47 |
| Msa0443410 | Msa0563980 | 0.806823 | 6.822467e-50 | -8.615850e-47 |
| Msa0443410 | Msa0567170 | 0.815042 | 1.131969e-51 | -8.615850e-47 |
| Msa0443410 | Msa0571620 | 0.852275 | 5.135685e-61 | -8.615850e-47 |
| Msa0443410 | Msa0577280 | 0.861375 | 1.072548e-63 | -8.615850e-47 |
| Msa0443410 | Msa0577330 | 0.862119 | 6.348279e-64 | -8.615850e-47 |
| Msa0443410 | Msa0577450 | 0.812076 | 5.085107e-51 | -8.615850e-47 |
| Msa0443410 | Msa0577820 | 0.822914 | 1.835963e-53 | -8.615850e-47 |
| Msa0443410 | Msa0581840 | 0.805745 | 1.151066e-49 | -8.615850e-47 |
| Msa0443410 | Msa0590200 | 0.859262 | 4.671792e-63 | -8.615850e-47 |
| Msa0443410 | Msa0606100 | 0.864226 | 1.416396e-64 | -8.615850e-47 |
| Msa0443410 | Msa0607800 | 0.849240 | 3.672314e-60 | -8.615850e-47 |
| Msa0443410 | Msa0608350 | 0.807793 | 4.249052e-50 | -8.615850e-47 |
| Msa0443410 | Msa0613630 | 0.838843 | 2.260194e-57 | -8.615850e-47 |
| Msa0443410 | Msa0615630 | 0.861282 | 1.144284e-63 | -8.615850e-47 |
| Msa0443410 | Msa0620500 | 0.848487 | 5.939085e-60 | -8.615850e-47 |
| Msa0443410 | Msa0621710 | 0.856623 | 2.837883e-62 | -8.615850e-47 |
| Msa0443410 | Msa0622920 | 0.857353 | 1.729721e-62 | -8.615850e-47 |
| Msa0443410 | Msa0630660 | 0.829174 | 5.964724e-55 | -8.615850e-47 |
| Msa0443410 | Msa0645340 | 0.839870 | 1.223508e-57 | -8.615850e-47 |
| Msa0443410 | Msa0647050 | 0.865421 | 5.977264e-65 | -8.615850e-47 |
| Msa0443410 | Msa0648040 | 0.845545 | 3.799188e-59 | -8.615850e-47 |
| Msa0443410 | Msa0648760 | 0.831244 | 1.862876e-55 | -8.615850e-47 |
| Msa0443410 | Msa0654740 | 0.822325 | 2.516873e-53 | -8.615850e-47 |
| Msa0443410 | Msa0657700 | 0.804531 | 2.065726e-49 | -8.615850e-47 |
| Msa0443410 | Msa0668900 | 0.868990 | 4.328742e-66 | -8.615850e-47 |
| Msa0443410 | Msa0687090 | 0.843225 | 1.597205e-58 | -8.615850e-47 |
| Msa0443410 | Msa0688380 | 0.803048 | 4.197613e-49 | -8.615850e-47 |
| Msa0443410 | Msa0690320 | 0.802597 | 5.201682e-49 | -8.615850e-47 |
| Msa0443410 | Msa0690740 | 0.853606 | 2.138708e-61 | -8.615850e-47 |
| Msa0443410 | Msa0691270 | 0.818900 | 1.539436e-52 | -8.615850e-47 |
| Msa0443410 | Msa0698730 | 0.843596 | 1.271024e-58 | -8.615850e-47 |
| Msa0443410 | Msa0700500 | 0.811342 | 7.345665e-51 | -8.615850e-47 |
| Msa0443410 | Msa0703600 | 0.816132 | 6.474872e-52 | -8.615850e-47 |
| Msa0443410 | Msa0709200 | 0.818571 | 1.828285e-52 | -8.615850e-47 |
| Msa0443410 | Msa0709440 | 0.827207 | 1.776936e-54 | -8.615850e-47 |
| Msa0443410 | Msa0713920 | 0.801990 | 6.935836e-49 | -8.615850e-47 |
| Msa0443410 | Msa0714520 | 0.854718 | 1.021485e-61 | -8.615850e-47 |
| Msa0443410 | Msa0714790 | 0.816675 | 4.894522e-52 | -8.615850e-47 |
| Msa0443410 | Msa0717830 | 0.803294 | 3.734059e-49 | -8.615850e-47 |
| Msa0443410 | Msa0722220 | 0.825707 | 4.047705e-54 | -8.615850e-47 |
| Msa0443410 | Msa0735780 | 0.811372 | 7.237201e-51 | -8.615850e-47 |
| Msa0443410 | Msa0736890 | 0.828728 | 7.652335e-55 | -8.615850e-47 |
| Msa0443410 | Msa0737990 | 0.804016 | 2.644382e-49 | -8.615850e-47 |
| Msa0443410 | Msa0740710 | 0.804513 | 2.084222e-49 | -8.615850e-47 |
| Msa0443410 | Msa0743440 | 0.842898 | 1.951702e-58 | -8.615850e-47 |
| Msa0443410 | Msa0745720 | 0.851756 | 7.214314e-61 | -8.615850e-47 |
| Msa0443410 | Msa0747740 | 0.849451 | 3.206915e-60 | -8.615850e-47 |
| Msa0443410 | Msa0755760 | 0.811009 | 8.672985e-51 | -8.615850e-47 |
| Msa0443410 | Msa0756820 | 0.816676 | 4.891341e-52 | -8.615850e-47 |
| Msa0443410 | Msa0758650 | 0.823162 | 1.606967e-53 | -8.615850e-47 |
| Msa0443410 | Msa0763550 | 0.813167 | 2.935384e-51 | -8.615850e-47 |
| Msa0443410 | Msa0773630 | 0.824305 | 8.673731e-54 | -8.615850e-47 |
| Msa0443410 | Msa0778550 | 0.824065 | 9.874424e-54 | -8.615850e-47 |
| Msa0443410 | Msa0780910 | 0.812150 | 4.901088e-51 | -8.615850e-47 |
| Msa0443410 | Msa0783930 | 0.822411 | 2.403581e-53 | -8.615850e-47 |
| Msa0443410 | Msa0800660 | 0.846542 | 2.034127e-59 | -8.615850e-47 |
| Msa0443410 | Msa0805680 | 0.824450 | 8.021330e-54 | -8.615850e-47 |
| Msa0443410 | Msa0811020 | 0.837482 | 5.063487e-57 | -8.615850e-47 |
| Msa0443410 | Msa0817360 | 0.809106 | 2.229479e-50 | -8.615850e-47 |
| Msa0443410 | Msa0818880 | 0.824335 | 8.536710e-54 | -8.615850e-47 |
| Msa0443410 | Msa0821160 | 0.817312 | 3.520763e-52 | -8.615850e-47 |
| Msa0443410 | Msa0835350 | 0.802185 | 6.326411e-49 | -8.615850e-47 |
| Msa0443410 | Msa0843050 | 0.826674 | 2.383243e-54 | -8.615850e-47 |
| Msa0443410 | Msa0863620 | 0.835065 | 2.084809e-56 | -8.615850e-47 |
| Msa0443410 | Msa0867110 | 0.850778 | 1.362300e-60 | -8.615850e-47 |
| Msa0443410 | Msa0879920 | 0.801974 | 6.988825e-49 | -8.615850e-47 |
| Msa0443410 | Msa0888790 | 0.804376 | 2.225648e-49 | -8.615850e-47 |
| Msa0443410 | Msa0909760 | 0.846793 | 1.737595e-59 | -8.615850e-47 |
| Msa0443410 | Msa0924430 | 0.838178 | 3.356132e-57 | -8.615850e-47 |
| Msa0443410 | Msa0931590 | 0.847801 | 9.187930e-60 | -8.615850e-47 |
| Msa0443410 | Msa0966320 | 0.810345 | 1.207138e-50 | -8.615850e-47 |
| Msa0443410 | Msa0966480 | 0.808806 | 2.583703e-50 | -8.615850e-47 |
| Msa0443410 | Msa1008670 | 0.841324 | 5.090969e-58 | -8.615850e-47 |
| Msa0443410 | Msa1033920 | 0.858303 | 9.036940e-63 | -8.615850e-47 |
| Msa0443410 | Msa1035570 | 0.844600 | 6.836947e-59 | -8.615850e-47 |
| Msa0443410 | Msa1035610 | 0.838847 | 2.254510e-57 | -8.615850e-47 |
| Msa0443410 | Msa1035650 | 0.838840 | 2.263963e-57 | -8.615850e-47 |
| Msa0443410 | Msa1042190 | 0.808360 | 3.218599e-50 | -8.615850e-47 |
| Msa0443410 | Msa1042880 | 0.826006 | 3.438122e-54 | -8.615850e-47 |
| Msa0443410 | Msa1059020 | 0.844971 | 5.431114e-59 | -8.615850e-47 |
| Msa0443410 | Msa1060900 | 0.826751 | 2.284711e-54 | -8.615850e-47 |
| Msa0443410 | Msa1076020 | 0.832648 | 8.384472e-56 | -8.615850e-47 |
| Msa0443410 | Msa1078880 | 0.818579 | 1.821018e-52 | -8.615850e-47 |
| Msa0443410 | Msa1078970 | 0.809957 | 1.463315e-50 | -8.615850e-47 |
| Msa0443410 | Msa1082200 | 0.817965 | 2.507573e-52 | -8.615850e-47 |
| Msa0443410 | Msa1082380 | 0.845471 | 3.978210e-59 | -8.615850e-47 |
| Msa0443410 | Msa1084530 | 0.824341 | 8.507778e-54 | -8.615850e-47 |
| Msa0443410 | Msa1104220 | 0.824483 | 7.877986e-54 | -8.615850e-47 |
| Msa0443410 | Msa1116190 | 0.837084 | 6.403696e-57 | -8.615850e-47 |
| Msa0443410 | Msa1116220 | 0.801257 | 9.806107e-49 | -8.615850e-47 |
| Msa0443410 | Msa1116660 | 0.847796 | 9.216556e-60 | -8.615850e-47 |
| Msa0443410 | Msa1116740 | 0.813342 | 2.686456e-51 | -8.615850e-47 |
| Msa0443410 | Msa1125820 | 0.832766 | 7.838511e-56 | -8.615850e-47 |
| Msa0443410 | Msa1125990 | 0.827936 | 1.187783e-54 | -8.615850e-47 |
| Msa0443410 | Msa1127280 | 0.842758 | 2.126020e-58 | -8.615850e-47 |
| Msa0443410 | Msa1127470 | 0.835199 | 1.928136e-56 | -8.615850e-47 |
| Msa0443410 | Msa1130420 | 0.810459 | 1.140662e-50 | -8.615850e-47 |
| Msa0443410 | Msa1132530 | 0.844334 | 8.062592e-59 | -8.615850e-47 |
| Msa0443410 | Msa1139050 | 0.834843 | 2.371421e-56 | -8.615850e-47 |
| Msa0443410 | Msa1148630 | 0.830723 | 2.500981e-55 | -8.615850e-47 |
| Msa0443410 | Msa1149450 | 0.819036 | 1.433687e-52 | -8.615850e-47 |
| Msa0443410 | Msa1162880 | 0.869504 | 2.946617e-66 | -8.615850e-47 |
| Msa0443410 | Msa1163180 | 0.813774 | 2.159348e-51 | -8.615850e-47 |
| Msa0443410 | Msa1165480 | 0.843382 | 1.450660e-58 | -8.615850e-47 |
| Msa0443410 | Msa1167470 | 0.808364 | 3.212310e-50 | -8.615850e-47 |
| Msa0443410 | Msa1169190 | 0.815206 | 1.040947e-51 | -8.615850e-47 |
| Msa0443410 | Msa1171070 | 0.809940 | 1.475664e-50 | -8.615850e-47 |
| Msa0443410 | Msa1171290 | 0.816668 | 4.911012e-52 | -8.615850e-47 |
| Msa0443410 | Msa1190390 | 0.837296 | 5.652704e-57 | -8.615850e-47 |
| Msa0443410 | Msa1201540 | 0.810882 | 9.239861e-51 | -8.615850e-47 |
| Msa0443410 | Msa1201780 | 0.801010 | 1.101593e-48 | -8.615850e-47 |
| Msa0443410 | Msa1213830 | 0.839999 | 1.132041e-57 | -8.615850e-47 |
| Msa0443410 | Msa1214350 | 0.874085 | 8.894568e-68 | -8.615850e-47 |
| Msa0443410 | Msa1215980 | 0.848714 | 5.139256e-60 | -8.615850e-47 |
| Msa0443410 | Msa1218820 | 0.838097 | 3.519745e-57 | -8.615850e-47 |
| Msa0443410 | Msa1226520 | 0.800205 | 1.607562e-48 | -8.615850e-47 |
| Msa0443410 | Msa1244240 | 0.846726 | 1.812646e-59 | -8.615850e-47 |
| Msa0443410 | Msa1254540 | 0.860446 | 2.053958e-63 | -8.615850e-47 |
| Msa0443410 | Msa1260710 | 0.803799 | 2.934374e-49 | -8.615850e-47 |
| Msa0443410 | Msa1261050 | 0.832951 | 7.051358e-56 | -8.615850e-47 |
| Msa0443410 | Msa1263740 | 0.853395 | 2.457897e-61 | -8.615850e-47 |
| Msa0443410 | Msa1263780 | 0.853397 | 2.454515e-61 | -8.615850e-47 |
| Msa0443410 | Msa1263900 | 0.802574 | 5.258937e-49 | -8.615850e-47 |
| Msa0443410 | Msa1268540 | 0.803162 | 3.976685e-49 | -8.615850e-47 |
| Msa0443410 | Msa1294460 | 0.834165 | 3.509429e-56 | -8.615850e-47 |
| Msa0443410 | Msa1294790 | 0.829713 | 4.412102e-55 | -8.615850e-47 |
| Msa0443410 | Msa1300460 | 0.841832 | 3.739833e-58 | -8.615850e-47 |
| Msa0443410 | Msa1301820 | 0.819618 | 1.056663e-52 | -8.615850e-47 |
| Msa0443410 | Msa1305780 | 0.833799 | 4.332538e-56 | -8.615850e-47 |
| Msa0443410 | Msa1305920 | 0.829358 | 5.383730e-55 | -8.615850e-47 |
| Msa0443410 | Msa1306790 | 0.826833 | 2.183851e-54 | -8.615850e-47 |
| Msa0443410 | Msa1321530 | 0.816524 | 5.291057e-52 | -8.615850e-47 |
| Msa0443410 | Msa1332950 | 0.854583 | 1.117320e-61 | -8.615850e-47 |
| Msa0443410 | Msa1338210 | 0.800013 | 1.758343e-48 | -8.615850e-47 |
| Msa0443410 | Msa1339170 | 0.881817 | 1.751108e-70 | -8.615850e-47 |
| Msa0443410 | Msa1342810 | 0.829938 | 3.889356e-55 | -8.615850e-47 |
| Msa0443410 | Msa1359980 | 0.827688 | 1.362644e-54 | -8.615850e-47 |
| Msa0443410 | Msa1361930 | 0.834839 | 2.376259e-56 | -8.615850e-47 |
| Msa0443410 | Msa1362130 | 0.838236 | 3.241597e-57 | -8.615850e-47 |
| Msa0443410 | Msa1364410 | 0.823149 | 1.617760e-53 | -8.615850e-47 |
| Msa0443410 | Msa1367180 | 0.802265 | 6.090306e-49 | -8.615850e-47 |
| Msa0443410 | Msa1367520 | 0.809137 | 2.195343e-50 | -8.615850e-47 |
| Msa0443410 | Msa1368750 | 0.821389 | 4.144798e-53 | -8.615850e-47 |
| Msa0443410 | Msa1374790 | 0.830840 | 2.341054e-55 | -8.615850e-47 |
| Msa0443410 | Msa1375350 | 0.804357 | 2.246154e-49 | -8.615850e-47 |
| Msa0443410 | Msa1381470 | 0.824993 | 5.972314e-54 | -8.615850e-47 |
| Msa0443410 | Msa1387500 | 0.803811 | 2.917724e-49 | -8.615850e-47 |
| Msa0443410 | Msa1399460 | 0.807197 | 5.685113e-50 | -8.615850e-47 |
| Msa0443410 | Msa1400010 | 0.801218 | 9.988696e-49 | -8.615850e-47 |
| Msa0443410 | Msa1406720 | 0.850733 | 1.403320e-60 | -8.615850e-47 |
| Msa0443410 | Msa1409410 | 0.805272 | 1.446076e-49 | -8.615850e-47 |
| Msa0443410 | Msa1413940 | 0.807074 | 6.035786e-50 | -8.615850e-47 |
| Msa0443410 | Msa1417060 | 0.801093 | 1.059355e-48 | -8.615850e-47 |
| Msa0443410 | Msa1424590 | 0.819528 | 1.107756e-52 | -8.615850e-47 |
| Msa0443410 | Msa1432520 | 0.802539 | 5.347047e-49 | -8.615850e-47 |
| Msa0443410 | Msa1434640 | 0.813238 | 2.832204e-51 | -8.615850e-47 |
| Msa0443410 | Msa1440630 | 0.803607 | 3.215369e-49 | -8.615850e-47 |
| Msa0443410 | Msa1442260 | 0.830493 | 2.846475e-55 | -8.615850e-47 |
| Msa0443410 | Msa1446100 | 0.803349 | 3.637671e-49 | -8.615850e-47 |
| Msa0443410 | Msa1447170 | 0.839355 | 1.665242e-57 | -8.615850e-47 |
| Msa0443410 | Msa1450190 | 0.803829 | 2.892694e-49 | -8.615850e-47 |
| Msa0443410 | Msa1451820 | 0.827174 | 1.809389e-54 | -8.615850e-47 |
| Msa0272260 | Msa0443410 | 0.816702 | 4.826927e-52 | -8.615850e-47 |
| Msa0337480 | Msa0443410 | 0.805480 | 1.308286e-49 | -8.615850e-47 |
| Msa0341680 | Msa0443410 | 0.817414 | 3.339002e-52 | -8.615850e-47 |
| Msa0343010 | Msa0443410 | 0.806313 | 8.738436e-50 | -8.615850e-47 |
| Msa0353950 | Msa0443410 | 0.808689 | 2.737391e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443410 | MtrunA17_Chr3g0108931 | 95.187 | 187 | 9 | 0 | 1 | 187 | 1 | 187 | 1.07e-129 | 361 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443410 | AT3G46940.1 | 87.234 | 141 | 18 | 0 | 47 | 187 | 26 | 166 | 9.01e-87 | 253 |
| Msa0443410 | AT3G46940.2 | 87.234 | 141 | 18 | 0 | 47 | 187 | 67 | 207 | 9.63e-87 | 254 |
Find 60 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGAAATTTCTGAGGTTT+TGG | 0.210645 | 3_3:+14096860 | Msa0443410:CDS |
| AAGAATGGAGCGGGAAAATT+TGG | 0.249765 | 3_3:+14096261 | Msa0443410:five_prime_UTR |
| GTTAGAGGTGAAGGTGGTTT+TGG | 0.293840 | 3_3:+14096897 | Msa0443410:CDS |
| AAATATACACCGAACAATTC+AGG | 0.342784 | 3_3:-14097084 | None:intergenic |
| GATTTGGATTCTACTGTTAG+AGG | 0.343621 | 3_3:+14096882 | Msa0443410:CDS |
| CTGGGGTTTGAGTTTGAGAT+AGG | 0.348699 | 3_3:+14096925 | Msa0443410:exon |
| ATCATATAGGTGTGTGTACT+TGG | 0.353101 | 3_3:+14096966 | Msa0443410:three_prime_UTR |
| TTTCTTCACTCTGAGAAAAC+TGG | 0.362791 | 3_3:-14096427 | None:intergenic |
| ACACGAGCATAGGTTCCTTC+AGG | 0.369361 | 3_3:-14096582 | None:intergenic |
| TCCAAAACCTCAGAAATTTC+AGG | 0.370463 | 3_3:-14096861 | None:intergenic |
| AACCTTTGAATCGGCGGCGC+TGG | 0.374420 | 3_3:-14096511 | None:intergenic |
| TCAACAATGTCCAACTTAAA+CGG | 0.388632 | 3_3:+14096393 | Msa0443410:CDS |
| TTTGTCTGTTGAACATGATT+AGG | 0.389515 | 3_3:+14097134 | Msa0443410:three_prime_UTR |
| CTGATTACAGAGGACCTGTT+GGG | 0.415838 | 3_3:+14096751 | Msa0443410:CDS |
| CTCAATAACATTCTCAGAAT+GGG | 0.427026 | 3_3:-14097032 | None:intergenic |
| CATTCGATTGACGTTGGTGC+TGG | 0.432456 | 3_3:+14096717 | Msa0443410:CDS |
| CTTGTTCATCCTGAATTGTT+CGG | 0.443502 | 3_3:+14097075 | Msa0443410:three_prime_UTR |
| GGCGGAGAGAGGAGAGCCGC+GGG | 0.455885 | 3_3:-14096475 | None:intergenic |
| ATGAGAGCTTTGCCGCGAGC+AGG | 0.461473 | 3_3:-14096534 | None:intergenic |
| TGAAACGACGCCGTTTAAGT+TGG | 0.465891 | 3_3:-14096403 | None:intergenic |
| ACTCAATAACATTCTCAGAA+TGG | 0.468171 | 3_3:-14097033 | None:intergenic |
| CGCCGAGATCGGGGTTGACA+TGG | 0.473074 | 3_3:+14096691 | Msa0443410:CDS |
| GAAGTGTGAGAGTGTGTTCA+TGG | 0.479038 | 3_3:-14096286 | None:intergenic |
| TTCCATGTCAACCCCGATCT+CGG | 0.481839 | 3_3:-14096693 | None:intergenic |
| AAGAAGTAATTGGAAAAGAA+TGG | 0.483929 | 3_3:+14096246 | None:intergenic |
| TTAAACAGTATAACCCCAAC+AGG | 0.497604 | 3_3:-14096765 | None:intergenic |
| CGCGGCTCTCCTCTCTCCGC+CGG | 0.497937 | 3_3:+14096477 | Msa0443410:CDS |
| GGAAGGTATAACGGCTTTGT+CGG | 0.505146 | 3_3:-14096454 | None:intergenic |
| GATTCTACTGTTAGAGGTGA+AGG | 0.505946 | 3_3:+14096888 | Msa0443410:CDS |
| TCATATAGGTGTGTGTACTT+GGG | 0.509297 | 3_3:+14096967 | Msa0443410:three_prime_UTR |
| CTCCAGCGCCGCCGATTCAA+AGG | 0.509909 | 3_3:+14096509 | Msa0443410:CDS |
| CTCTCCATCGCCGTCCCTGA+AGG | 0.513836 | 3_3:+14096567 | Msa0443410:CDS |
| GGCGCTGGAGAGATCGTATC+CGG | 0.519854 | 3_3:-14096496 | None:intergenic |
| CACGAGCATAGGTTCCTTCA+GGG | 0.535140 | 3_3:-14096581 | None:intergenic |
| GCGAGCAGGAACCTTTGAAT+CGG | 0.540643 | 3_3:-14096520 | None:intergenic |
| AGAGCCGCGGGAAGGTATAA+CGG | 0.542038 | 3_3:-14096463 | None:intergenic |
| GAACATGATTAGGATATGAA+AGG | 0.549260 | 3_3:+14097144 | Msa0443410:three_prime_UTR |
| CATATAGGTGTGTGTACTTG+GGG | 0.549413 | 3_3:+14096968 | Msa0443410:three_prime_UTR |
| ACGGCGATGGAGAGATCTGT+GGG | 0.554559 | 3_3:-14096558 | None:intergenic |
| GGTTCCTTCAGGGACGGCGA+TGG | 0.559917 | 3_3:-14096571 | None:intergenic |
| TATTACTCCTGAAATTTCTG+AGG | 0.568921 | 3_3:+14096854 | Msa0443410:CDS |
| TCTACTGTTAGAGGTGAAGG+TGG | 0.578300 | 3_3:+14096891 | Msa0443410:CDS |
| GACGGCGATGGAGAGATCTG+TGG | 0.578622 | 3_3:-14096559 | None:intergenic |
| AGCAGGAACCTTTGAATCGG+CGG | 0.581168 | 3_3:-14096517 | None:intergenic |
| GTAATTACCAACACGAGCAT+AGG | 0.588762 | 3_3:-14096592 | None:intergenic |
| AGATCGTATCCGGCGGAGAG+AGG | 0.592423 | 3_3:-14096486 | None:intergenic |
| GAGAGAGGAGAGCCGCGGGA+AGG | 0.593764 | 3_3:-14096471 | None:intergenic |
| TAATTGGAAAAGAATGGAGC+GGG | 0.594749 | 3_3:+14096252 | None:intergenic |
| GAAGGAACCTATGCTCGTGT+TGG | 0.606547 | 3_3:+14096585 | Msa0443410:CDS |
| CGGCGGAGAGAGGAGAGCCG+CGG | 0.611864 | 3_3:-14096476 | None:intergenic |
| GCTGATTACAGAGGACCTGT+TGG | 0.614644 | 3_3:+14096750 | Msa0443410:CDS |
| TGGAAGCATTCGATTGACGT+TGG | 0.614719 | 3_3:+14096711 | Msa0443410:CDS |
| AGCATAGGTTCCTTCAGGGA+CGG | 0.629807 | 3_3:-14096577 | None:intergenic |
| GATTCAAAGGTTCCTGCTCG+CGG | 0.632457 | 3_3:+14096522 | Msa0443410:CDS |
| TGATTACAGAGGACCTGTTG+GGG | 0.654205 | 3_3:+14096752 | Msa0443410:CDS |
| GTAATTGGAAAAGAATGGAG+CGG | 0.678157 | 3_3:+14096251 | None:intergenic |
| AAAGCCGTTATACCTTCCCG+CGG | 0.736048 | 3_3:+14096459 | Msa0443410:CDS |
| GTGATTGATGCTGATTACAG+AGG | 0.740502 | 3_3:+14096741 | Msa0443410:CDS |
| GCTGGAGAGATCGTATCCGG+CGG | 0.743244 | 3_3:-14096493 | None:intergenic |
| CGGCGATGGAGAGATCTGTG+GGG | 0.756952 | 3_3:-14096557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAGTTTTATAATCATAT+AGG | + | chr3_3:14096953-14096972 | Msa0443410:three_prime_UTR | 10.0% |
| !!! | AATTAGTTTTATAATCATAT+AGG | + | chr3_3:14096953-14096972 | Msa0443410:three_prime_UTR | 10.0% |
| !!! | TTTTCGTATTGTATTAAAAG+TGG | + | chr3_3:14097105-14097124 | Msa0443410:three_prime_UTR | 20.0% |
| !!! | TTTTCGTATTGTATTAAAAG+TGG | + | chr3_3:14097105-14097124 | Msa0443410:three_prime_UTR | 20.0% |
| ! | TGAAATTCAAAATTGGGAAA+GGG | - | chr3_3:14096625-14096644 | None:intergenic | 25.0% |
| !! | TTTCCCAATTTTGAATTTCA+GGG | + | chr3_3:14096625-14096644 | Msa0443410:intron | 25.0% |
| ! | AAACCCTGAAATTCAAAATT+GGG | - | chr3_3:14096631-14096650 | None:intergenic | 25.0% |
| ! | AAAACCCTGAAATTCAAAAT+TGG | - | chr3_3:14096632-14096651 | None:intergenic | 25.0% |
| !!! | AATTTCAGGGTTTTGAATTT+AGG | + | chr3_3:14096638-14096657 | Msa0443410:intron | 25.0% |
| !!! | ATTTCAGGGTTTTGAATTTA+GGG | + | chr3_3:14096639-14096658 | Msa0443410:intron | 25.0% |
| ! | TAGGATATGAAAGGATTAAT+TGG | + | chr3_3:14097153-14097172 | Msa0443410:three_prime_UTR | 25.0% |
| ! | TGAAATTCAAAATTGGGAAA+GGG | - | chr3_3:14096625-14096644 | None:intergenic | 25.0% |
| !! | TTTCCCAATTTTGAATTTCA+GGG | + | chr3_3:14096625-14096644 | Msa0443410:intron | 25.0% |
| ! | AAACCCTGAAATTCAAAATT+GGG | - | chr3_3:14096631-14096650 | None:intergenic | 25.0% |
| ! | AAAACCCTGAAATTCAAAAT+TGG | - | chr3_3:14096632-14096651 | None:intergenic | 25.0% |
| !!! | AATTTCAGGGTTTTGAATTT+AGG | + | chr3_3:14096638-14096657 | Msa0443410:intron | 25.0% |
| !!! | ATTTCAGGGTTTTGAATTTA+GGG | + | chr3_3:14096639-14096658 | Msa0443410:intron | 25.0% |
| TCAACAATGTCCAACTTAAA+CGG | + | chr3_3:14096393-14096412 | Msa0443410:CDS | 30.0% | |
| GAAATTCAAAATTGGGAAAG+GGG | - | chr3_3:14096624-14096643 | None:intergenic | 30.0% | |
| CTGAAATTCAAAATTGGGAA+AGG | - | chr3_3:14096626-14096645 | None:intergenic | 30.0% | |
| ! | CTTTCCCAATTTTGAATTTC+AGG | + | chr3_3:14096624-14096643 | Msa0443410:intron | 30.0% |
| !!! | GTTGATTTTGAAGTGAAAGT+TGG | + | chr3_3:14096798-14096817 | Msa0443410:CDS | 30.0% |
| TATTACTCCTGAAATTTCTG+AGG | + | chr3_3:14096854-14096873 | Msa0443410:CDS | 30.0% | |
| !!! | AATTTCTGAGGTTTTGGATT+TGG | + | chr3_3:14096866-14096885 | Msa0443410:CDS | 30.0% |
| CTCAATAACATTCTCAGAAT+GGG | - | chr3_3:14097035-14097054 | None:intergenic | 30.0% | |
| ACTCAATAACATTCTCAGAA+TGG | - | chr3_3:14097036-14097055 | None:intergenic | 30.0% | |
| AAATATACACCGAACAATTC+AGG | - | chr3_3:14097087-14097106 | None:intergenic | 30.0% | |
| TTTGTCTGTTGAACATGATT+AGG | + | chr3_3:14097134-14097153 | Msa0443410:three_prime_UTR | 30.0% | |
| GAACATGATTAGGATATGAA+AGG | + | chr3_3:14097144-14097163 | Msa0443410:three_prime_UTR | 30.0% | |
| TCAACAATGTCCAACTTAAA+CGG | + | chr3_3:14096393-14096412 | Msa0443410:CDS | 30.0% | |
| GAAATTCAAAATTGGGAAAG+GGG | - | chr3_3:14096624-14096643 | None:intergenic | 30.0% | |
| CTGAAATTCAAAATTGGGAA+AGG | - | chr3_3:14096626-14096645 | None:intergenic | 30.0% | |
| ! | CTTTCCCAATTTTGAATTTC+AGG | + | chr3_3:14096624-14096643 | Msa0443410:intron | 30.0% |
| !!! | GTTGATTTTGAAGTGAAAGT+TGG | + | chr3_3:14096798-14096817 | Msa0443410:CDS | 30.0% |
| TATTACTCCTGAAATTTCTG+AGG | + | chr3_3:14096854-14096873 | Msa0443410:CDS | 30.0% | |
| !!! | AATTTCTGAGGTTTTGGATT+TGG | + | chr3_3:14096866-14096885 | Msa0443410:CDS | 30.0% |
| CTCAATAACATTCTCAGAAT+GGG | - | chr3_3:14097035-14097054 | None:intergenic | 30.0% | |
| ACTCAATAACATTCTCAGAA+TGG | - | chr3_3:14097036-14097055 | None:intergenic | 30.0% | |
| AAATATACACCGAACAATTC+AGG | - | chr3_3:14097087-14097106 | None:intergenic | 30.0% | |
| TTTGTCTGTTGAACATGATT+AGG | + | chr3_3:14097134-14097153 | Msa0443410:three_prime_UTR | 30.0% | |
| GAACATGATTAGGATATGAA+AGG | + | chr3_3:14097144-14097163 | Msa0443410:three_prime_UTR | 30.0% | |
| ! | TTTCTTCACTCTGAGAAAAC+TGG | - | chr3_3:14096430-14096449 | None:intergenic | 35.0% |
| TTAAACAGTATAACCCCAAC+AGG | - | chr3_3:14096768-14096787 | None:intergenic | 35.0% | |
| !!! | TCCTGAAATTTCTGAGGTTT+TGG | + | chr3_3:14096860-14096879 | Msa0443410:CDS | 35.0% |
| TCCAAAACCTCAGAAATTTC+AGG | - | chr3_3:14096864-14096883 | None:intergenic | 35.0% | |
| GATTTGGATTCTACTGTTAG+AGG | + | chr3_3:14096882-14096901 | Msa0443410:CDS | 35.0% | |
| ATCATATAGGTGTGTGTACT+TGG | + | chr3_3:14096966-14096985 | Msa0443410:three_prime_UTR | 35.0% | |
| TCATATAGGTGTGTGTACTT+GGG | + | chr3_3:14096967-14096986 | Msa0443410:three_prime_UTR | 35.0% | |
| CTTGTTCATCCTGAATTGTT+CGG | + | chr3_3:14097075-14097094 | Msa0443410:three_prime_UTR | 35.0% | |
| ! | TTTCTTCACTCTGAGAAAAC+TGG | - | chr3_3:14096430-14096449 | None:intergenic | 35.0% |
| TTAAACAGTATAACCCCAAC+AGG | - | chr3_3:14096768-14096787 | None:intergenic | 35.0% | |
| !!! | TCCTGAAATTTCTGAGGTTT+TGG | + | chr3_3:14096860-14096879 | Msa0443410:CDS | 35.0% |
| TCCAAAACCTCAGAAATTTC+AGG | - | chr3_3:14096864-14096883 | None:intergenic | 35.0% | |
| GATTTGGATTCTACTGTTAG+AGG | + | chr3_3:14096882-14096901 | Msa0443410:CDS | 35.0% | |
| ATCATATAGGTGTGTGTACT+TGG | + | chr3_3:14096966-14096985 | Msa0443410:three_prime_UTR | 35.0% | |
| TCATATAGGTGTGTGTACTT+GGG | + | chr3_3:14096967-14096986 | Msa0443410:three_prime_UTR | 35.0% | |
| CTTGTTCATCCTGAATTGTT+CGG | + | chr3_3:14097075-14097094 | Msa0443410:three_prime_UTR | 35.0% | |
| AAGAATGGAGCGGGAAAATT+TGG | + | chr3_3:14096261-14096280 | Msa0443410:five_prime_UTR | 40.0% | |
| GTAATTACCAACACGAGCAT+AGG | - | chr3_3:14096595-14096614 | None:intergenic | 40.0% | |
| ! | GTGATTGATGCTGATTACAG+AGG | + | chr3_3:14096741-14096760 | Msa0443410:CDS | 40.0% |
| GATTCTACTGTTAGAGGTGA+AGG | + | chr3_3:14096888-14096907 | Msa0443410:CDS | 40.0% | |
| !!! | AAGGTGGTTTTGGATCTACT+GGG | + | chr3_3:14096907-14096926 | Msa0443410:CDS | 40.0% |
| CATATAGGTGTGTGTACTTG+GGG | + | chr3_3:14096968-14096987 | Msa0443410:three_prime_UTR | 40.0% | |
| AAGAATGGAGCGGGAAAATT+TGG | + | chr3_3:14096261-14096280 | Msa0443410:five_prime_UTR | 40.0% | |
| GTAATTACCAACACGAGCAT+AGG | - | chr3_3:14096595-14096614 | None:intergenic | 40.0% | |
| ! | GTGATTGATGCTGATTACAG+AGG | + | chr3_3:14096741-14096760 | Msa0443410:CDS | 40.0% |
| GATTCTACTGTTAGAGGTGA+AGG | + | chr3_3:14096888-14096907 | Msa0443410:CDS | 40.0% | |
| !!! | AAGGTGGTTTTGGATCTACT+GGG | + | chr3_3:14096907-14096926 | Msa0443410:CDS | 40.0% |
| CATATAGGTGTGTGTACTTG+GGG | + | chr3_3:14096968-14096987 | Msa0443410:three_prime_UTR | 40.0% | |
| ! | GAAGTGTGAGAGTGTGTTCA+TGG | - | chr3_3:14096289-14096308 | None:intergenic | 45.0% |
| TGAAACGACGCCGTTTAAGT+TGG | - | chr3_3:14096406-14096425 | None:intergenic | 45.0% | |
| ! | GGAAGGTATAACGGCTTTGT+CGG | - | chr3_3:14096457-14096476 | None:intergenic | 45.0% |
| !! | TGGAAGCATTCGATTGACGT+TGG | + | chr3_3:14096711-14096730 | Msa0443410:CDS | 45.0% |
| CTGATTACAGAGGACCTGTT+GGG | + | chr3_3:14096751-14096770 | Msa0443410:CDS | 45.0% | |
| TGATTACAGAGGACCTGTTG+GGG | + | chr3_3:14096752-14096771 | Msa0443410:CDS | 45.0% | |
| TCTACTGTTAGAGGTGAAGG+TGG | + | chr3_3:14096891-14096910 | Msa0443410:CDS | 45.0% | |
| ! | GTTAGAGGTGAAGGTGGTTT+TGG | + | chr3_3:14096897-14096916 | Msa0443410:CDS | 45.0% |
| !!! | GAAGGTGGTTTTGGATCTAC+TGG | + | chr3_3:14096906-14096925 | Msa0443410:CDS | 45.0% |
| !!! | AGGTGGTTTTGGATCTACTG+GGG | + | chr3_3:14096908-14096927 | Msa0443410:CDS | 45.0% |
| ! | CTGGGGTTTGAGTTTGAGAT+AGG | + | chr3_3:14096925-14096944 | Msa0443410:exon | 45.0% |
| ! | GAAGTGTGAGAGTGTGTTCA+TGG | - | chr3_3:14096289-14096308 | None:intergenic | 45.0% |
| TGAAACGACGCCGTTTAAGT+TGG | - | chr3_3:14096406-14096425 | None:intergenic | 45.0% | |
| ! | GGAAGGTATAACGGCTTTGT+CGG | - | chr3_3:14096457-14096476 | None:intergenic | 45.0% |
| !! | TGGAAGCATTCGATTGACGT+TGG | + | chr3_3:14096711-14096730 | Msa0443410:CDS | 45.0% |
| CTGATTACAGAGGACCTGTT+GGG | + | chr3_3:14096751-14096770 | Msa0443410:CDS | 45.0% | |
| TGATTACAGAGGACCTGTTG+GGG | + | chr3_3:14096752-14096771 | Msa0443410:CDS | 45.0% | |
| TCTACTGTTAGAGGTGAAGG+TGG | + | chr3_3:14096891-14096910 | Msa0443410:CDS | 45.0% | |
| ! | GTTAGAGGTGAAGGTGGTTT+TGG | + | chr3_3:14096897-14096916 | Msa0443410:CDS | 45.0% |
| !!! | GAAGGTGGTTTTGGATCTAC+TGG | + | chr3_3:14096906-14096925 | Msa0443410:CDS | 45.0% |
| !!! | AGGTGGTTTTGGATCTACTG+GGG | + | chr3_3:14096908-14096927 | Msa0443410:CDS | 45.0% |
| ! | CTGGGGTTTGAGTTTGAGAT+AGG | + | chr3_3:14096925-14096944 | Msa0443410:exon | 45.0% |
| AAAGCCGTTATACCTTCCCG+CGG | + | chr3_3:14096459-14096478 | Msa0443410:CDS | 50.0% | |
| AGCAGGAACCTTTGAATCGG+CGG | - | chr3_3:14096520-14096539 | None:intergenic | 50.0% | |
| GCGAGCAGGAACCTTTGAAT+CGG | - | chr3_3:14096523-14096542 | None:intergenic | 50.0% | |
| GATTCAAAGGTTCCTGCTCG+CGG | + | chr3_3:14096522-14096541 | Msa0443410:CDS | 50.0% | |
| AGCATAGGTTCCTTCAGGGA+CGG | - | chr3_3:14096580-14096599 | None:intergenic | 50.0% | |
| CACGAGCATAGGTTCCTTCA+GGG | - | chr3_3:14096584-14096603 | None:intergenic | 50.0% | |
| ACACGAGCATAGGTTCCTTC+AGG | - | chr3_3:14096585-14096604 | None:intergenic | 50.0% | |
| GAAGGAACCTATGCTCGTGT+TGG | + | chr3_3:14096585-14096604 | Msa0443410:CDS | 50.0% | |
| !! | GATTTTTGCAGCGCCGAGAT+CGG | + | chr3_3:14096680-14096699 | Msa0443410:intron | 50.0% |
| !! | ATTTTTGCAGCGCCGAGATC+GGG | + | chr3_3:14096681-14096700 | Msa0443410:intron | 50.0% |
| TTCCATGTCAACCCCGATCT+CGG | - | chr3_3:14096696-14096715 | None:intergenic | 50.0% | |
| CATTCGATTGACGTTGGTGC+TGG | + | chr3_3:14096717-14096736 | Msa0443410:CDS | 50.0% | |
| GCTGATTACAGAGGACCTGT+TGG | + | chr3_3:14096750-14096769 | Msa0443410:CDS | 50.0% | |
| AAAGCCGTTATACCTTCCCG+CGG | + | chr3_3:14096459-14096478 | Msa0443410:CDS | 50.0% | |
| AGCAGGAACCTTTGAATCGG+CGG | - | chr3_3:14096520-14096539 | None:intergenic | 50.0% | |
| GCGAGCAGGAACCTTTGAAT+CGG | - | chr3_3:14096523-14096542 | None:intergenic | 50.0% | |
| GATTCAAAGGTTCCTGCTCG+CGG | + | chr3_3:14096522-14096541 | Msa0443410:CDS | 50.0% | |
| AGCATAGGTTCCTTCAGGGA+CGG | - | chr3_3:14096580-14096599 | None:intergenic | 50.0% | |
| CACGAGCATAGGTTCCTTCA+GGG | - | chr3_3:14096584-14096603 | None:intergenic | 50.0% | |
| ACACGAGCATAGGTTCCTTC+AGG | - | chr3_3:14096585-14096604 | None:intergenic | 50.0% | |
| GAAGGAACCTATGCTCGTGT+TGG | + | chr3_3:14096585-14096604 | Msa0443410:CDS | 50.0% | |
| !! | GATTTTTGCAGCGCCGAGAT+CGG | + | chr3_3:14096680-14096699 | Msa0443410:intron | 50.0% |
| !! | ATTTTTGCAGCGCCGAGATC+GGG | + | chr3_3:14096681-14096700 | Msa0443410:intron | 50.0% |
| TTCCATGTCAACCCCGATCT+CGG | - | chr3_3:14096696-14096715 | None:intergenic | 50.0% | |
| CATTCGATTGACGTTGGTGC+TGG | + | chr3_3:14096717-14096736 | Msa0443410:CDS | 50.0% | |
| GCTGATTACAGAGGACCTGT+TGG | + | chr3_3:14096750-14096769 | Msa0443410:CDS | 50.0% | |
| ! | AGAGCCGCGGGAAGGTATAA+CGG | - | chr3_3:14096466-14096485 | None:intergenic | 55.0% |
| ACGGCGATGGAGAGATCTGT+GGG | - | chr3_3:14096561-14096580 | None:intergenic | 55.0% | |
| !! | TTTTTGCAGCGCCGAGATCG+GGG | + | chr3_3:14096682-14096701 | Msa0443410:intron | 55.0% |
| ! | AGAGCCGCGGGAAGGTATAA+CGG | - | chr3_3:14096466-14096485 | None:intergenic | 55.0% |
| ACGGCGATGGAGAGATCTGT+GGG | - | chr3_3:14096561-14096580 | None:intergenic | 55.0% | |
| !! | TTTTTGCAGCGCCGAGATCG+GGG | + | chr3_3:14096682-14096701 | Msa0443410:intron | 55.0% |
| AGATCGTATCCGGCGGAGAG+AGG | - | chr3_3:14096489-14096508 | None:intergenic | 60.0% | |
| GCTGGAGAGATCGTATCCGG+CGG | - | chr3_3:14096496-14096515 | None:intergenic | 60.0% | |
| ! | GGCGCTGGAGAGATCGTATC+CGG | - | chr3_3:14096499-14096518 | None:intergenic | 60.0% |
| AACCTTTGAATCGGCGGCGC+TGG | - | chr3_3:14096514-14096533 | None:intergenic | 60.0% | |
| ATGAGAGCTTTGCCGCGAGC+AGG | - | chr3_3:14096537-14096556 | None:intergenic | 60.0% | |
| CGGCGATGGAGAGATCTGTG+GGG | - | chr3_3:14096560-14096579 | None:intergenic | 60.0% | |
| GACGGCGATGGAGAGATCTG+TGG | - | chr3_3:14096562-14096581 | None:intergenic | 60.0% | |
| AGATCGTATCCGGCGGAGAG+AGG | - | chr3_3:14096489-14096508 | None:intergenic | 60.0% | |
| GCTGGAGAGATCGTATCCGG+CGG | - | chr3_3:14096496-14096515 | None:intergenic | 60.0% | |
| ! | GGCGCTGGAGAGATCGTATC+CGG | - | chr3_3:14096499-14096518 | None:intergenic | 60.0% |
| AACCTTTGAATCGGCGGCGC+TGG | - | chr3_3:14096514-14096533 | None:intergenic | 60.0% | |
| ATGAGAGCTTTGCCGCGAGC+AGG | - | chr3_3:14096537-14096556 | None:intergenic | 60.0% | |
| CGGCGATGGAGAGATCTGTG+GGG | - | chr3_3:14096560-14096579 | None:intergenic | 60.0% | |
| GACGGCGATGGAGAGATCTG+TGG | - | chr3_3:14096562-14096581 | None:intergenic | 60.0% | |
| !! | CTCCAGCGCCGCCGATTCAA+AGG | + | chr3_3:14096509-14096528 | Msa0443410:CDS | 65.0% |
| CTCTCCATCGCCGTCCCTGA+AGG | + | chr3_3:14096567-14096586 | Msa0443410:CDS | 65.0% | |
| GGTTCCTTCAGGGACGGCGA+TGG | - | chr3_3:14096574-14096593 | None:intergenic | 65.0% | |
| CGCCGAGATCGGGGTTGACA+TGG | + | chr3_3:14096691-14096710 | Msa0443410:CDS | 65.0% | |
| !! | CTCCAGCGCCGCCGATTCAA+AGG | + | chr3_3:14096509-14096528 | Msa0443410:CDS | 65.0% |
| CTCTCCATCGCCGTCCCTGA+AGG | + | chr3_3:14096567-14096586 | Msa0443410:CDS | 65.0% | |
| GGTTCCTTCAGGGACGGCGA+TGG | - | chr3_3:14096574-14096593 | None:intergenic | 65.0% | |
| CGCCGAGATCGGGGTTGACA+TGG | + | chr3_3:14096691-14096710 | Msa0443410:CDS | 65.0% | |
| GAGAGAGGAGAGCCGCGGGA+AGG | - | chr3_3:14096474-14096493 | None:intergenic | 70.0% | |
| GAGAGAGGAGAGCCGCGGGA+AGG | - | chr3_3:14096474-14096493 | None:intergenic | 70.0% | |
| GGCGGAGAGAGGAGAGCCGC+GGG | - | chr3_3:14096478-14096497 | None:intergenic | 75.0% | |
| CGGCGGAGAGAGGAGAGCCG+CGG | - | chr3_3:14096479-14096498 | None:intergenic | 75.0% | |
| CGCGGCTCTCCTCTCTCCGC+CGG | + | chr3_3:14096477-14096496 | Msa0443410:CDS | 75.0% | |
| GGCGGAGAGAGGAGAGCCGC+GGG | - | chr3_3:14096478-14096497 | None:intergenic | 75.0% | |
| CGGCGGAGAGAGGAGAGCCG+CGG | - | chr3_3:14096479-14096498 | None:intergenic | 75.0% | |
| CGCGGCTCTCCTCTCTCCGC+CGG | + | chr3_3:14096477-14096496 | Msa0443410:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 14096257 | 14097173 | 14096257 | ID=Msa0443410;Name=Msa0443410 |
| chr3_3 | mRNA | 14096257 | 14097173 | 14096257 | ID=Msa0443410-mRNA-1;Parent=Msa0443410;Name=Msa0443410-mRNA-1;_AED=0.05;_eAED=0.05;_QI=31|1|1|1|1|1|2|238|187 |
| chr3_3 | exon | 14096257 | 14096606 | 14096257 | ID=Msa0443410-mRNA-1:exon:3120;Parent=Msa0443410-mRNA-1 |
| chr3_3 | exon | 14096691 | 14097173 | 14096691 | ID=Msa0443410-mRNA-1:exon:3121;Parent=Msa0443410-mRNA-1 |
| chr3_3 | five_prime_UTR | 14096257 | 14096287 | 14096257 | ID=Msa0443410-mRNA-1:five_prime_utr;Parent=Msa0443410-mRNA-1 |
| chr3_3 | CDS | 14096288 | 14096606 | 14096288 | ID=Msa0443410-mRNA-1:cds;Parent=Msa0443410-mRNA-1 |
| chr3_3 | CDS | 14096691 | 14096935 | 14096691 | ID=Msa0443410-mRNA-1:cds;Parent=Msa0443410-mRNA-1 |
| chr3_3 | three_prime_UTR | 14096936 | 14097173 | 14096936 | ID=Msa0443410-mRNA-1:three_prime_utr;Parent=Msa0443410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
