Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227400 | XP_013467519.1 | 96.552 | 116 | 4 | 0 | 1 | 116 | 1 | 116 | 5.26e-70 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227400 | A0A072VIW8 | 96.552 | 116 | 4 | 0 | 1 | 116 | 1 | 116 | 2.51e-70 | 215 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001790 | Msa1227400 | 0.804122 | 2.514138e-49 | -8.615850e-47 |
| Msa0004920 | Msa1227400 | 0.812203 | 4.771030e-51 | -8.615850e-47 |
| Msa0008410 | Msa1227400 | 0.804022 | 2.636588e-49 | -8.615850e-47 |
| Msa0017510 | Msa1227400 | 0.803536 | 3.326521e-49 | -8.615850e-47 |
| Msa0044020 | Msa1227400 | 0.807760 | 4.318993e-50 | -8.615850e-47 |
| Msa0045490 | Msa1227400 | 0.801061 | 1.075521e-48 | -8.615850e-47 |
| Msa0051770 | Msa1227400 | 0.809297 | 2.028488e-50 | -8.615850e-47 |
| Msa0064350 | Msa1227400 | 0.802703 | 4.946188e-49 | -8.615850e-47 |
| Msa0068680 | Msa1227400 | 0.812852 | 3.441328e-51 | -8.615850e-47 |
| Msa0076000 | Msa1227400 | 0.821109 | 4.809258e-53 | -8.615850e-47 |
| Msa0078650 | Msa1227400 | 0.802219 | 6.222837e-49 | -8.615850e-47 |
| Msa0097990 | Msa1227400 | 0.805801 | 1.120049e-49 | -8.615850e-47 |
| Msa0112750 | Msa1227400 | 0.809195 | 2.133529e-50 | -8.615850e-47 |
| Msa0113970 | Msa1227400 | 0.831740 | 1.406801e-55 | -8.615850e-47 |
| Msa0607050 | Msa1227400 | 0.811161 | 8.041919e-51 | -8.615850e-47 |
| Msa0615870 | Msa1227400 | 0.807504 | 4.894468e-50 | -8.615850e-47 |
| Msa0630830 | Msa1227400 | 0.824911 | 6.245486e-54 | -8.615850e-47 |
| Msa0631120 | Msa1227400 | 0.807110 | 5.932802e-50 | -8.615850e-47 |
| Msa0638070 | Msa1227400 | 0.805766 | 1.139047e-49 | -8.615850e-47 |
| Msa0641190 | Msa1227400 | 0.800471 | 1.419087e-48 | -8.615850e-47 |
| Msa0644840 | Msa1227400 | 0.806222 | 9.134796e-50 | -8.615850e-47 |
| Msa0649490 | Msa1227400 | 0.802135 | 6.475516e-49 | -8.615850e-47 |
| Msa0657970 | Msa1227400 | 0.807798 | 4.239803e-50 | -8.615850e-47 |
| Msa0690150 | Msa1227400 | 0.825196 | 5.348474e-54 | -8.615850e-47 |
| Msa0693380 | Msa1227400 | 0.801671 | 8.066892e-49 | -8.615850e-47 |
| Msa0696640 | Msa1227400 | 0.826832 | 2.185235e-54 | -8.615850e-47 |
| Msa0703230 | Msa1227400 | 0.804375 | 2.226385e-49 | -8.615850e-47 |
| Msa0708520 | Msa1227400 | 0.818211 | 2.206966e-52 | -8.615850e-47 |
| Msa0709500 | Msa1227400 | 0.816765 | 4.671785e-52 | -8.615850e-47 |
| Msa0742380 | Msa1227400 | 0.819452 | 1.152851e-52 | -8.615850e-47 |
| Msa0742390 | Msa1227400 | 0.807390 | 5.173344e-50 | -8.615850e-47 |
| Msa0743200 | Msa1227400 | 0.817018 | 4.099379e-52 | -8.615850e-47 |
| Msa0744040 | Msa1227400 | 0.801015 | 1.098995e-48 | -8.615850e-47 |
| Msa0750880 | Msa1227400 | 0.817610 | 3.015988e-52 | -8.615850e-47 |
| Msa0756540 | Msa1227400 | 0.807495 | 4.915054e-50 | -8.615850e-47 |
| Msa0765380 | Msa1227400 | 0.813279 | 2.773833e-51 | -8.615850e-47 |
| Msa0777990 | Msa1227400 | 0.811827 | 5.760552e-51 | -8.615850e-47 |
| Msa0787260 | Msa1227400 | 0.845814 | 3.211226e-59 | -8.615850e-47 |
| Msa0790850 | Msa1227400 | 0.815128 | 1.083675e-51 | -8.615850e-47 |
| Msa0824660 | Msa1227400 | 0.804284 | 2.325503e-49 | -8.615850e-47 |
| Msa0150800 | Msa1227400 | 0.812160 | 4.876528e-51 | -8.615850e-47 |
| Msa0157100 | Msa1227400 | 0.803161 | 3.977274e-49 | -8.615850e-47 |
| Msa0157290 | Msa1227400 | 0.803060 | 4.174449e-49 | -8.615850e-47 |
| Msa0184960 | Msa1227400 | 0.804293 | 2.316214e-49 | -8.615850e-47 |
| Msa0186890 | Msa1227400 | 0.800187 | 1.621227e-48 | -8.615850e-47 |
| Msa0191050 | Msa1227400 | 0.823999 | 1.023507e-53 | -8.615850e-47 |
| Msa0202950 | Msa1227400 | 0.802527 | 5.377937e-49 | -8.615850e-47 |
| Msa0205850 | Msa1227400 | 0.826810 | 2.211117e-54 | -8.615850e-47 |
| Msa0216240 | Msa1227400 | 0.834251 | 3.338505e-56 | -8.615850e-47 |
| Msa0220580 | Msa1227400 | 0.806101 | 9.688906e-50 | -8.615850e-47 |
| Msa0231650 | Msa1227400 | 0.802085 | 6.631164e-49 | -8.615850e-47 |
| Msa0233350 | Msa1227400 | 0.821998 | 2.996759e-53 | -8.615850e-47 |
| Msa1227400 | Msa1247250 | 0.820127 | 8.082606e-53 | -8.615850e-47 |
| Msa1227400 | Msa1249240 | 0.803401 | 3.548721e-49 | -8.615850e-47 |
| Msa1227400 | Msa1254510 | 0.803359 | 3.620194e-49 | -8.615850e-47 |
| Msa1227400 | Msa1255040 | -0.817529 | 3.145246e-52 | -8.615850e-47 |
| Msa1227400 | Msa1267430 | 0.809076 | 2.262608e-50 | -8.615850e-47 |
| Msa1227400 | Msa1283170 | 0.832955 | 7.033091e-56 | -8.615850e-47 |
| Msa1227400 | Msa1288420 | 0.800710 | 1.268673e-48 | -8.615850e-47 |
| Msa1227400 | Msa1294480 | 0.827441 | 1.561933e-54 | -8.615850e-47 |
| Msa1227400 | Msa1300870 | 0.807648 | 4.561180e-50 | -8.615850e-47 |
| Msa1227400 | Msa1316830 | 0.801977 | 6.981127e-49 | -8.615850e-47 |
| Msa1227400 | Msa1331910 | 0.832945 | 7.074678e-56 | -8.615850e-47 |
| Msa1227400 | Msa1353060 | 0.812079 | 5.077982e-51 | -8.615850e-47 |
| Msa1227400 | Msa1353980 | 0.800049 | 1.729453e-48 | -8.615850e-47 |
| Msa1227400 | Msa1356440 | 0.801879 | 7.310528e-49 | -8.615850e-47 |
| Msa1227400 | Msa1359040 | 0.801769 | 7.702707e-49 | -8.615850e-47 |
| Msa1227400 | Msa1371640 | 0.815503 | 8.943106e-52 | -8.615850e-47 |
| Msa1227400 | Msa1376200 | 0.807826 | 4.181246e-50 | -8.615850e-47 |
| Msa1227400 | Msa1385670 | 0.810497 | 1.119240e-50 | -8.615850e-47 |
| Msa1227400 | Msa1424450 | 0.807930 | 3.974350e-50 | -8.615850e-47 |
| Msa1227400 | Msa1457910 | 0.802995 | 4.305718e-49 | -8.615850e-47 |
| Msa1227400 | Msa1460020 | 0.814176 | 1.760182e-51 | -8.615850e-47 |
| Msa1227400 | Msa1463670 | 0.800667 | 1.294045e-48 | -8.615850e-47 |
| Msa0379640 | Msa1227400 | 0.807656 | 4.544303e-50 | -8.615850e-47 |
| Msa0385580 | Msa1227400 | 0.808361 | 3.215835e-50 | -8.615850e-47 |
| Msa0387730 | Msa1227400 | 0.815859 | 7.449132e-52 | -8.615850e-47 |
| Msa0402330 | Msa1227400 | 0.802270 | 6.075569e-49 | -8.615850e-47 |
| Msa0410650 | Msa1227400 | 0.814584 | 1.430039e-51 | -8.615850e-47 |
| Msa0414170 | Msa1227400 | 0.807105 | 5.946501e-50 | -8.615850e-47 |
| Msa0419820 | Msa1227400 | 0.808615 | 2.839680e-50 | -8.615850e-47 |
| Msa0426330 | Msa1227400 | 0.804022 | 2.636440e-49 | -8.615850e-47 |
| Msa0426360 | Msa1227400 | 0.821689 | 3.533728e-53 | -8.615850e-47 |
| Msa0426400 | Msa1227400 | 0.819196 | 1.318713e-52 | -8.615850e-47 |
| Msa0433640 | Msa1227400 | 0.803503 | 3.379104e-49 | -8.615850e-47 |
| Msa0436050 | Msa1227400 | 0.802466 | 5.536723e-49 | -8.615850e-47 |
| Msa0439200 | Msa1227400 | 0.802772 | 4.787503e-49 | -8.615850e-47 |
| Msa0462390 | Msa1227400 | 0.821959 | 3.060020e-53 | -8.615850e-47 |
| Msa0462430 | Msa1227400 | 0.822100 | 2.837500e-53 | -8.615850e-47 |
| Msa0462480 | Msa1227400 | 0.813270 | 2.786212e-51 | -8.615850e-47 |
| Msa0470690 | Msa1227400 | 0.806485 | 8.041779e-50 | -8.615850e-47 |
| Msa0473080 | Msa1227400 | 0.821882 | 3.187941e-53 | -8.615850e-47 |
| Msa0993290 | Msa1227400 | 0.806052 | 9.919076e-50 | -8.615850e-47 |
| Msa0993600 | Msa1227400 | 0.809484 | 1.849974e-50 | -8.615850e-47 |
| Msa1012320 | Msa1227400 | 0.811071 | 8.408310e-51 | -8.615850e-47 |
| Msa1013400 | Msa1227400 | 0.837551 | 4.862754e-57 | -8.615850e-47 |
| Msa1040400 | Msa1227400 | 0.800876 | 1.173038e-48 | -8.615850e-47 |
| Msa1040890 | Msa1227400 | 0.804932 | 1.703702e-49 | -8.615850e-47 |
| Msa1052290 | Msa1227400 | 0.803795 | 2.939672e-49 | -8.615850e-47 |
| Msa1081150 | Msa1227400 | 0.805157 | 1.528995e-49 | -8.615850e-47 |
| Msa1082500 | Msa1227400 | 0.825148 | 5.488219e-54 | -8.615850e-47 |
| Msa1083210 | Msa1227400 | 0.802399 | 5.715439e-49 | -8.615850e-47 |
| Msa1085200 | Msa1227400 | 0.818702 | 1.708057e-52 | -8.615850e-47 |
| Msa1093530 | Msa1227400 | 0.835737 | 1.409994e-56 | -8.615850e-47 |
| Msa1098400 | Msa1227400 | 0.804893 | 1.736014e-49 | -8.615850e-47 |
| Msa0246430 | Msa1227400 | 0.807165 | 5.774998e-50 | -8.615850e-47 |
| Msa0270220 | Msa1227400 | -0.806679 | 7.316261e-50 | -8.615850e-47 |
| Msa0274360 | Msa1227400 | 0.804942 | 1.695433e-49 | -8.615850e-47 |
| Msa0282250 | Msa1227400 | 0.804651 | 1.949733e-49 | -8.615850e-47 |
| Msa0284420 | Msa1227400 | 0.806821 | 6.827978e-50 | -8.615850e-47 |
| Msa0287650 | Msa1227400 | 0.816774 | 4.650312e-52 | -8.615850e-47 |
| Msa0291500 | Msa1227400 | 0.813527 | 2.447068e-51 | -8.615850e-47 |
| Msa0307830 | Msa1227400 | -0.801113 | 1.049610e-48 | -8.615850e-47 |
| Msa0311860 | Msa1227400 | 0.805335 | 1.402968e-49 | -8.615850e-47 |
| Msa0312650 | Msa1227400 | 0.815894 | 7.314819e-52 | -8.615850e-47 |
| Msa0329350 | Msa1227400 | 0.806456 | 8.153395e-50 | -8.615850e-47 |
| Msa0336250 | Msa1227400 | 0.813835 | 2.093123e-51 | -8.615850e-47 |
| Msa1125760 | Msa1227400 | 0.832163 | 1.105802e-55 | -8.615850e-47 |
| Msa1127890 | Msa1227400 | 0.832876 | 7.360361e-56 | -8.615850e-47 |
| Msa1165870 | Msa1227400 | 0.807852 | 4.129011e-50 | -8.615850e-47 |
| Msa1170730 | Msa1227400 | 0.821083 | 4.874152e-53 | -8.615850e-47 |
| Msa1171360 | Msa1227400 | 0.816913 | 4.328265e-52 | -8.615850e-47 |
| Msa1172670 | Msa1227400 | 0.817364 | 3.425732e-52 | -8.615850e-47 |
| Msa1178170 | Msa1227400 | 0.800611 | 1.328684e-48 | -8.615850e-47 |
| Msa1179460 | Msa1227400 | 0.802463 | 5.544865e-49 | -8.615850e-47 |
| Msa1187840 | Msa1227400 | 0.833234 | 5.993968e-56 | -8.615850e-47 |
| Msa1201560 | Msa1227400 | 0.807245 | 5.552598e-50 | -8.615850e-47 |
| Msa1209010 | Msa1227400 | 0.805268 | 1.448814e-49 | -8.615850e-47 |
| Msa1214020 | Msa1227400 | 0.806619 | 7.535170e-50 | -8.615850e-47 |
| Msa1214890 | Msa1227400 | 0.819964 | 8.808687e-53 | -8.615850e-47 |
| Msa1218600 | Msa1227400 | 0.836574 | 8.642708e-57 | -8.615850e-47 |
| Msa0484780 | Msa1227400 | 0.824245 | 8.958720e-54 | -8.615850e-47 |
| Msa0505770 | Msa1227400 | 0.800673 | 1.290852e-48 | -8.615850e-47 |
| Msa0507680 | Msa1227400 | 0.821308 | 4.326328e-53 | -8.615850e-47 |
| Msa0509610 | Msa1227400 | 0.807908 | 4.015714e-50 | -8.615850e-47 |
| Msa0521540 | Msa1227400 | 0.812058 | 5.132367e-51 | -8.615850e-47 |
| Msa0523460 | Msa1227400 | 0.809461 | 1.871146e-50 | -8.615850e-47 |
| Msa0526890 | Msa1227400 | 0.808857 | 2.519931e-50 | -8.615850e-47 |
| Msa0534590 | Msa1227400 | 0.808962 | 2.393071e-50 | -8.615850e-47 |
| Msa0541860 | Msa1227400 | 0.800794 | 1.219366e-48 | -8.615850e-47 |
| Msa0549470 | Msa1227400 | 0.813086 | 3.058855e-51 | -8.615850e-47 |
| Msa0551890 | Msa1227400 | 0.810719 | 1.002445e-50 | -8.615850e-47 |
| Msa0553050 | Msa1227400 | 0.802583 | 5.236364e-49 | -8.615850e-47 |
| Msa0557070 | Msa1227400 | 0.802528 | 5.376413e-49 | -8.615850e-47 |
| Msa0577220 | Msa1227400 | 0.818732 | 1.680978e-52 | -8.615850e-47 |
| Msa0590800 | Msa1227400 | 0.814820 | 1.267811e-51 | -8.615850e-47 |
| Msa0597330 | Msa1227400 | 0.804364 | 2.238613e-49 | -8.615850e-47 |
| Msa0863370 | Msa1227400 | 0.807321 | 5.351842e-50 | -8.615850e-47 |
| Msa0869100 | Msa1227400 | 0.804253 | 2.360122e-49 | -8.615850e-47 |
| Msa0876200 | Msa1227400 | 0.833462 | 5.258569e-56 | -8.615850e-47 |
| Msa0880140 | Msa1227400 | 0.802030 | 6.805936e-49 | -8.615850e-47 |
| Msa0888530 | Msa1227400 | 0.833359 | 5.578872e-56 | -8.615850e-47 |
| Msa0902760 | Msa1227400 | 0.837128 | 6.240894e-57 | -8.615850e-47 |
| Msa0933230 | Msa1227400 | 0.835323 | 1.794303e-56 | -8.615850e-47 |
| Msa0933310 | Msa1227400 | 0.817178 | 3.773245e-52 | -8.615850e-47 |
| Msa0968590 | Msa1227400 | 0.811291 | 7.536441e-51 | -8.615850e-47 |
| Msa0970030 | Msa1227400 | 0.803462 | 3.446315e-49 | -8.615850e-47 |
| Msa0971090 | Msa1227400 | 0.819565 | 1.086736e-52 | -8.615850e-47 |
| Msa0979010 | Msa1227400 | 0.817812 | 2.715359e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227400 | MtrunA17_Chr1g0172941 | 96.552 | 116 | 4 | 0 | 1 | 116 | 1 | 116 | 4.84e-74 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227400 | AT3G57320.1 | 50.000 | 96 | 47 | 1 | 8 | 102 | 5 | 100 | 2.67e-22 | 84.3 |
Find 24 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGAATGAAACTAATTTA+AGG | 0.180020 | 8_2:+2501695 | None:intergenic |
| TCTTCGATAGAAAGGCTTTA+AGG | 0.224574 | 8_2:+2505102 | None:intergenic |
| CGAAATCTGTTTGGCCTTGC+TGG | 0.272167 | 8_2:-2501812 | Msa1227400:three_prime_UTR |
| GCCTTTATTTGACATAATTT+AGG | 0.306054 | 8_2:+2505247 | None:intergenic |
| GCCTAAATTATGTCAAATAA+AGG | 0.340224 | 8_2:-2505248 | Msa1227400:five_prime_UTR |
| TAAACTGAGTCAGGTTAGTT+AGG | 0.394129 | 8_2:+2505225 | None:intergenic |
| TTGATGATACGAAATCTGTT+TGG | 0.432468 | 8_2:-2501821 | Msa1227400:three_prime_UTR |
| GCTAATCTCTAAACTGAGTC+AGG | 0.435850 | 8_2:+2505216 | None:intergenic |
| TCAGAAGCTCTTCGATAGAA+AGG | 0.463559 | 8_2:+2505094 | None:intergenic |
| GCTGCCATCAATAGTAGAAA+AGG | 0.467186 | 8_2:-2503004 | Msa1227400:intron |
| ATCGCAGAAGATGAATTATA+CGG | 0.472527 | 8_2:+2502672 | None:intergenic |
| AAAAGTAAATGAAAATGTAT+TGG | 0.486434 | 8_2:-2505270 | Msa1227400:five_prime_UTR |
| GGTCAAAGCACAGGAACAGC+TGG | 0.502758 | 8_2:-2501923 | Msa1227400:CDS |
| GTCTGTTAAAATAAACGAGT+TGG | 0.507951 | 8_2:-2505131 | Msa1227400:CDS |
| TCACCATGTGGTTATACACT+TGG | 0.532605 | 8_2:+2501739 | None:intergenic |
| GAGGAATTTGTATCGAAGAA+TGG | 0.537737 | 8_2:-2505158 | Msa1227400:exon |
| TTGACCACAGGTCAAAGCAC+AGG | 0.579489 | 8_2:-2501932 | Msa1227400:intron |
| AAACAGAGAGAAGGAAGCAG+AGG | 0.589194 | 8_2:-2505177 | Msa1227400:five_prime_UTR |
| GAATTTGTATCGAAGAATGG+TGG | 0.607570 | 8_2:-2505155 | Msa1227400:exon |
| GAGTGGGGAACAATTGAAAG+TGG | 0.620724 | 8_2:-2502873 | Msa1227400:CDS |
| CTTCCAAGTGTATAACCACA+TGG | 0.626776 | 8_2:-2501742 | Msa1227400:three_prime_UTR |
| TCGAAGAGCTTCTGAAGCTG+AGG | 0.630900 | 8_2:-2505086 | Msa1227400:intron |
| CTATAGTGCTAAAACCAGCA+AGG | 0.685122 | 8_2:+2501798 | None:intergenic |
| ATTACAATTAAATCACCATG+TGG | 0.690520 | 8_2:+2501727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAGAAATTATAAAATTA+AGG | - | chr8_2:2504631-2504650 | Msa1227400:intron | 10.0% |
| !!! | GTTTGTATTTTTATTTTTTT+TGG | - | chr8_2:2505112-2505131 | Msa1227400:CDS | 10.0% |
| !! | AAAAGTAAATGAAAATGTAT+TGG | - | chr8_2:2501706-2501725 | Msa1227400:three_prime_UTR | 15.0% |
| !!! | TTTGTTTGGTTTAATTATTA+GGG | + | chr8_2:2501991-2502010 | None:intergenic | 15.0% |
| !!! | ATACATTTAATTTTTTGCAA+CGG | - | chr8_2:2504210-2504229 | Msa1227400:intron | 15.0% |
| !! | AAAATCAAATAATTGGTAAA+AGG | + | chr8_2:2504243-2504262 | None:intergenic | 15.0% |
| !! | ACAATTCATTTATCTAATTT+GGG | + | chr8_2:2504532-2504551 | None:intergenic | 15.0% |
| !! | AACAATTCATTTATCTAATT+TGG | + | chr8_2:2504533-2504552 | None:intergenic | 15.0% |
| !!! | ATTAGATAAATGAATTGTTT+TGG | - | chr8_2:2504534-2504553 | Msa1227400:intron | 15.0% |
| !!! | TTAGATAAATGAATTGTTTT+GGG | - | chr8_2:2504535-2504554 | Msa1227400:intron | 15.0% |
| !!! | TAAAATTAACTTTATTTGCA+GGG | + | chr8_2:2504713-2504732 | None:intergenic | 15.0% |
| !!! | ATAAAATTAACTTTATTTGC+AGG | + | chr8_2:2504714-2504733 | None:intergenic | 15.0% |
| !!! | TAACATTTTAAATCTTACAT+GGG | + | chr8_2:2504840-2504859 | None:intergenic | 15.0% |
| !! | ATTATTAGGGTATATATGAA+GGG | + | chr8_2:2501978-2501997 | None:intergenic | 20.0% |
| !! | AATTATTAGGGTATATATGA+AGG | + | chr8_2:2501979-2501998 | None:intergenic | 20.0% |
| !!! | GTTTGTTTGGTTTAATTATT+AGG | + | chr8_2:2501992-2502011 | None:intergenic | 20.0% |
| !! | AGAGATATATTGATAAATTG+AGG | - | chr8_2:2502211-2502230 | Msa1227400:intron | 20.0% |
| !!! | AAAAAAATGCTTTTGATTGA+TGG | - | chr8_2:2502595-2502614 | Msa1227400:intron | 20.0% |
| !! | TAGTGTACATTAAAAATAGA+TGG | + | chr8_2:2502665-2502684 | None:intergenic | 20.0% |
| !!! | TTTTAATGTACACTATAATC+AGG | - | chr8_2:2502670-2502689 | Msa1227400:CDS | 20.0% |
| !!! | TATTTGGTATGTAATTCTTT+TGG | - | chr8_2:2502714-2502733 | Msa1227400:intron | 20.0% |
| !! | AAATTTCTTTACAAAACACT+TGG | - | chr8_2:2503492-2503511 | Msa1227400:intron | 20.0% |
| !!! | TTCTTACCACTTAATATTTT+AGG | - | chr8_2:2503929-2503948 | Msa1227400:intron | 20.0% |
| !! | GTTAATTTCAGAAAAACAAA+AGG | - | chr8_2:2504166-2504185 | Msa1227400:intron | 20.0% |
| !!! | TACATTTAATTTTTTGCAAC+GGG | - | chr8_2:2504211-2504230 | Msa1227400:intron | 20.0% |
| !!! | TTACCAATTATTTGATTTTC+AGG | - | chr8_2:2504244-2504263 | Msa1227400:intron | 20.0% |
| !!! | CTAACATTTTAAATCTTACA+TGG | + | chr8_2:2504841-2504860 | None:intergenic | 20.0% |
| !!! | TTTTTGATTGCAAAAATAGA+CGG | - | chr8_2:2505209-2505228 | Msa1227400:five_prime_UTR | 20.0% |
| !!! | TTTGGAATGAAACTAATTTA+AGG | + | chr8_2:2505284-2505303 | None:intergenic | 20.0% |
| ! | GCCTAAATTATGTCAAATAA+AGG | - | chr8_2:2501728-2501747 | Msa1227400:three_prime_UTR | 25.0% |
| !! | GCCTTTATTTGACATAATTT+AGG | + | chr8_2:2501732-2501751 | None:intergenic | 25.0% |
| !!! | GTTATTTTGATGCTATGAAA+TGG | + | chr8_2:2502120-2502139 | None:intergenic | 25.0% |
| ! | AAAACTTGAGTTTGATTACT+AGG | - | chr8_2:2502501-2502520 | Msa1227400:intron | 25.0% |
| ! | GTATTATCAGGTATGATATT+TGG | - | chr8_2:2502698-2502717 | Msa1227400:CDS | 25.0% |
| ! | TATATTCATTTCAGTATGTG+TGG | + | chr8_2:2503347-2503366 | None:intergenic | 25.0% |
| ! | ACTGAAATGAATATACAAAC+CGG | - | chr8_2:2503352-2503371 | Msa1227400:intron | 25.0% |
| !!! | GAAATTTGCAAGTTTGTTAA+AGG | + | chr8_2:2503479-2503498 | None:intergenic | 25.0% |
| ! | TTGGATAGTATCAAAGAAAA+TGG | + | chr8_2:2503526-2503545 | None:intergenic | 25.0% |
| ! | GGTTAAACTCTTGTATATAA+AGG | - | chr8_2:2503684-2503703 | Msa1227400:intron | 25.0% |
| !!! | CGTTTTAATTGACAACAAAA+TGG | + | chr8_2:2503794-2503813 | None:intergenic | 25.0% |
| ! | TTGTATAAGTGAGTTACTAA+AGG | - | chr8_2:2503893-2503912 | Msa1227400:intron | 25.0% |
| !! | TAGTCTTTTCAAATTGAAGT+TGG | - | chr8_2:2504026-2504045 | Msa1227400:intron | 25.0% |
| !!! | TGTTGCTTTAATTCCAAAAT+CGG | - | chr8_2:2504593-2504612 | Msa1227400:intron | 25.0% |
| !!! | TTGTACCACATTTTGAAAAA+AGG | - | chr8_2:2504735-2504754 | Msa1227400:intron | 25.0% |
| !!! | GAATACCTTTTTTCAAAATG+TGG | + | chr8_2:2504743-2504762 | None:intergenic | 25.0% |
| !!! | AAAAAAGGTATTCGTAAACA+AGG | - | chr8_2:2504750-2504769 | Msa1227400:intron | 25.0% |
| ! | TTATCAGACAGAAACTAATA+TGG | - | chr8_2:2504793-2504812 | Msa1227400:intron | 25.0% |
| !!! | AACTTATTGTGCCATTTTTT+GGG | - | chr8_2:2504953-2504972 | Msa1227400:intron | 25.0% |
| ! | ATTACAATTAAATCACCATG+TGG | + | chr8_2:2505252-2505271 | None:intergenic | 25.0% |
| AAGATTGAAAAACAGAGAGA+AGG | - | chr8_2:2501790-2501809 | Msa1227400:three_prime_UTR | 30.0% | |
| GTCTGTTAAAATAAACGAGT+TGG | - | chr8_2:2501845-2501864 | Msa1227400:three_prime_UTR | 30.0% | |
| TCGTATCACATCTATCAAAT+GGG | + | chr8_2:2502175-2502194 | None:intergenic | 30.0% | |
| ATCGTATCACATCTATCAAA+TGG | + | chr8_2:2502176-2502195 | None:intergenic | 30.0% | |
| TCAATGAGTGTATGAAAAAG+TGG | - | chr8_2:2502237-2502256 | Msa1227400:intron | 30.0% | |
| CAATGAGTGTATGAAAAAGT+GGG | - | chr8_2:2502238-2502257 | Msa1227400:intron | 30.0% | |
| ACATAATTCAGCGTAATCAT+AGG | - | chr8_2:2502327-2502346 | Msa1227400:intron | 30.0% | |
| ! | AAGTTTTACTGTCCTATTGA+TGG | + | chr8_2:2502488-2502507 | None:intergenic | 30.0% |
| AATAGATGGAATGTTGAAGT+AGG | + | chr8_2:2502651-2502670 | None:intergenic | 30.0% | |
| AATCAGGTTTGAGTATTATC+AGG | - | chr8_2:2502686-2502705 | Msa1227400:CDS | 30.0% | |
| CAATGGAAATAGAATGTGTA+GGG | + | chr8_2:2502855-2502874 | None:intergenic | 30.0% | |
| !! | AACCTTTGGAATAAAAGGTT+TGG | - | chr8_2:2502944-2502963 | Msa1227400:intron | 30.0% |
| !! | ACCTTTGGAATAAAAGGTTT+GGG | - | chr8_2:2502945-2502964 | Msa1227400:intron | 30.0% |
| ! | CTATGATCTTTACTGTTTCT+TGG | - | chr8_2:2503083-2503102 | Msa1227400:intron | 30.0% |
| TTATTTGACAATTTGCCTAG+TGG | - | chr8_2:2503321-2503340 | Msa1227400:intron | 30.0% | |
| CTGAAATGAATATACAAACC+GGG | - | chr8_2:2503353-2503372 | Msa1227400:intron | 30.0% | |
| TGAAATGAATATACAAACCG+GGG | - | chr8_2:2503354-2503373 | Msa1227400:intron | 30.0% | |
| !! | ATTTGCAAGTTTGTTAAAGG+AGG | + | chr8_2:2503476-2503495 | None:intergenic | 30.0% |
| TTCTTTGATACTATCCAAAC+TGG | - | chr8_2:2503528-2503547 | Msa1227400:intron | 30.0% | |
| TCTTTGATACTATCCAAACT+GGG | - | chr8_2:2503529-2503548 | Msa1227400:intron | 30.0% | |
| !!! | CACTATTCAAGTTTGTTTTG+TGG | - | chr8_2:2503612-2503631 | Msa1227400:intron | 30.0% |
| ! | TTTTGTGCTACATGAAATGA+AGG | + | chr8_2:2503716-2503735 | None:intergenic | 30.0% |
| AGCGTTCCTAAAATATTAAG+TGG | + | chr8_2:2503938-2503957 | None:intergenic | 30.0% | |
| ! | CATACCTTTTCTACTATTGA+TGG | + | chr8_2:2503979-2503998 | None:intergenic | 30.0% |
| GTTTCAAAGACACGTAATTT+AGG | + | chr8_2:2504068-2504087 | None:intergenic | 30.0% | |
| GAGCCTGAAAATCAAATAAT+TGG | + | chr8_2:2504250-2504269 | None:intergenic | 30.0% | |
| !! | ATTATTTGATTTTCAGGCTC+AGG | - | chr8_2:2504250-2504269 | Msa1227400:intron | 30.0% |
| ATCGCAGAAGATGAATTATA+CGG | + | chr8_2:2504307-2504326 | None:intergenic | 30.0% | |
| TTAGAGCAAGTTAGTATTTC+TGG | - | chr8_2:2504350-2504369 | Msa1227400:intron | 30.0% | |
| ! | CAGATACTTTGAGAATTGAA+AGG | + | chr8_2:2504380-2504399 | None:intergenic | 30.0% |
| ! | TCTGAAAAGTCTCTGAAAAA+TGG | - | chr8_2:2504457-2504476 | Msa1227400:intron | 30.0% |
| ! | TTTGTTGTCGTAGAGTAATT+CGG | - | chr8_2:2504489-2504508 | Msa1227400:intron | 30.0% |
| !!! | AATTGTTTTGGGTACACTTT+TGG | - | chr8_2:2504546-2504565 | Msa1227400:intron | 30.0% |
| GACATGTAGAAAATTTAGAC+AGG | - | chr8_2:2504653-2504672 | Msa1227400:intron | 30.0% | |
| AGGAATCATGTAATAGTGAA+CGG | - | chr8_2:2504673-2504692 | Msa1227400:intron | 30.0% | |
| TTAAATCTTACATGGGAAAC+TGG | + | chr8_2:2504833-2504852 | None:intergenic | 30.0% | |
| TAGCCAATAGAATGTAAGTT+AGG | - | chr8_2:2504858-2504877 | Msa1227400:intron | 30.0% | |
| AAGCCTAACTTACATTCTAT+TGG | + | chr8_2:2504864-2504883 | None:intergenic | 30.0% | |
| AAATCTGGTAAACAGATACA+GGG | + | chr8_2:2504887-2504906 | None:intergenic | 30.0% | |
| AAAATCTGGTAAACAGATAC+AGG | + | chr8_2:2504888-2504907 | None:intergenic | 30.0% | |
| AATTCATCGAAGCTAAAATC+TGG | + | chr8_2:2504902-2504921 | None:intergenic | 30.0% | |
| !!! | GAACTTATTGTGCCATTTTT+TGG | - | chr8_2:2504952-2504971 | Msa1227400:intron | 30.0% |
| !!! | ACTTATTGTGCCATTTTTTG+GGG | - | chr8_2:2504954-2504973 | Msa1227400:intron | 30.0% |
| AAATTGTGTTCCCCAAAAAA+TGG | + | chr8_2:2504967-2504986 | None:intergenic | 30.0% | |
| TTATTTCATTTCTTGACCAC+AGG | - | chr8_2:2505032-2505051 | Msa1227400:intron | 30.0% | |
| ! | TTGATGATACGAAATCTGTT+TGG | - | chr8_2:2505155-2505174 | Msa1227400:exon | 30.0% |
| ! | TAAACTGAGTCAGGTTAGTT+AGG | + | chr8_2:2501754-2501773 | None:intergenic | 35.0% |
| GAGGAATTTGTATCGAAGAA+TGG | - | chr8_2:2501818-2501837 | Msa1227400:three_prime_UTR | 35.0% | |
| GAATTTGTATCGAAGAATGG+TGG | - | chr8_2:2501821-2501840 | Msa1227400:three_prime_UTR | 35.0% | |
| TCTTCGATAGAAAGGCTTTA+AGG | + | chr8_2:2501877-2501896 | None:intergenic | 35.0% | |
| ! | GAAGAAATGAAGGGTTTGTT+TGG | + | chr8_2:2502005-2502024 | None:intergenic | 35.0% |
| ! | TTTTATGGACTCACTGTTGT+TGG | - | chr8_2:2502072-2502091 | Msa1227400:intron | 35.0% |
| CGTATCACATCTATCAAATG+GGG | + | chr8_2:2502174-2502193 | None:intergenic | 35.0% | |
| ! | TGATACGATGATGATGTGAT+AGG | - | chr8_2:2502187-2502206 | Msa1227400:intron | 35.0% |
| GTTCAAATTATTATCCGTGC+CGG | + | chr8_2:2502297-2502316 | None:intergenic | 35.0% | |
| ATCATGTTCCACATAACAGT+TGG | - | chr8_2:2502441-2502460 | Msa1227400:intron | 35.0% | |
| ! | TTTGAGTTCCAACTGTTATG+TGG | + | chr8_2:2502452-2502471 | None:intergenic | 35.0% |
| GAATAATGAGCTCCATCAAT+AGG | - | chr8_2:2502473-2502492 | Msa1227400:intron | 35.0% | |
| ACTTGAGTTTGATTACTAGG+TGG | - | chr8_2:2502504-2502523 | Msa1227400:intron | 35.0% | |
| CTTGAGTTTGATTACTAGGT+GGG | - | chr8_2:2502505-2502524 | Msa1227400:intron | 35.0% | |
| TGATAATCCGAAGTTCATTC+CGG | + | chr8_2:2502559-2502578 | None:intergenic | 35.0% | |
| GAATGAACTTCGGATTATCA+TGG | - | chr8_2:2502559-2502578 | Msa1227400:intron | 35.0% | |
| ATGTTGAAGTAGGAGGAAAA+GGG | + | chr8_2:2502641-2502660 | None:intergenic | 35.0% | |
| AATGTTGAAGTAGGAGGAAA+AGG | + | chr8_2:2502642-2502661 | None:intergenic | 35.0% | |
| AGTTCAGTTTCACATAAGCT+AGG | + | chr8_2:2502757-2502776 | None:intergenic | 35.0% | |
| GCAATGGAAATAGAATGTGT+AGG | + | chr8_2:2502856-2502875 | None:intergenic | 35.0% | |
| ATTTCCATTGCTTGTCTATG+TGG | - | chr8_2:2502865-2502884 | Msa1227400:CDS | 35.0% | |
| CTTGTCTATGTGGATGATTA+CGG | - | chr8_2:2502875-2502894 | Msa1227400:CDS | 35.0% | |
| TTGTCTATGTGGATGATTAC+GGG | - | chr8_2:2502876-2502895 | Msa1227400:CDS | 35.0% | |
| AACAGCTTCCATCTCATTAA+GGG | + | chr8_2:2502907-2502926 | None:intergenic | 35.0% | |
| TAACAGCTTCCATCTCATTA+AGG | + | chr8_2:2502908-2502927 | None:intergenic | 35.0% | |
| AGATTTCTTCACTCAACCTT+TGG | - | chr8_2:2502930-2502949 | Msa1227400:intron | 35.0% | |
| !! | CACTCAACCTTTGGAATAAA+AGG | - | chr8_2:2502939-2502958 | Msa1227400:intron | 35.0% |
| ! | ACCCAAACCTTTTATTCCAA+AGG | + | chr8_2:2502949-2502968 | None:intergenic | 35.0% |
| ! | TTTGGAATAAAAGGTTTGGG+TGG | - | chr8_2:2502948-2502967 | Msa1227400:intron | 35.0% |
| AAGACCTATTGGACAAGAAA+AGG | + | chr8_2:2503019-2503038 | None:intergenic | 35.0% | |
| TTCCGCTTCAAAGGAAAAAT+GGG | + | chr8_2:2503134-2503153 | None:intergenic | 35.0% | |
| ATTCCGCTTCAAAGGAAAAA+TGG | + | chr8_2:2503135-2503154 | None:intergenic | 35.0% | |
| ! | AAGAGTACAAGTGCAGTAAA+GGG | + | chr8_2:2503226-2503245 | None:intergenic | 35.0% |
| CTCATGAAAACTTGAGTTTG+AGG | + | chr8_2:2503281-2503300 | None:intergenic | 35.0% | |
| TCAGAGAAAAGCTTCAATCT+CGG | - | chr8_2:2503428-2503447 | Msa1227400:intron | 35.0% | |
| AGTATCAAAGAAAATGGTGC+TGG | + | chr8_2:2503520-2503539 | None:intergenic | 35.0% | |
| AACATACACTCTCCAACTTA+AGG | - | chr8_2:2503559-2503578 | Msa1227400:intron | 35.0% | |
| TAACAAGTTCACATGGACAT+AGG | + | chr8_2:2503827-2503846 | None:intergenic | 35.0% | |
| ! | AGAGCTTTAACAAGTTCACA+TGG | + | chr8_2:2503834-2503853 | None:intergenic | 35.0% |
| ! | TAGAAAAGGTATGTACTGAG+AGG | - | chr8_2:2503986-2504005 | Msa1227400:intron | 35.0% |
| ! | AAGTTGGTTCTTGATGCTAT+GGG | - | chr8_2:2504042-2504061 | Msa1227400:intron | 35.0% |
| !!! | ACTTTTTCAGATACTGAGAG+TGG | - | chr8_2:2504086-2504105 | Msa1227400:intron | 35.0% |
| !!! | CTTTTTCAGATACTGAGAGT+GGG | - | chr8_2:2504087-2504106 | Msa1227400:intron | 35.0% |
| !! | TTTTTCAGATACTGAGAGTG+GGG | - | chr8_2:2504088-2504107 | Msa1227400:intron | 35.0% |
| TAAGTATGCGTTATCAGAGT+AGG | - | chr8_2:2504428-2504447 | Msa1227400:intron | 35.0% | |
| !!! | AACAGATAGAATGCCGATTT+TGG | + | chr8_2:2504609-2504628 | None:intergenic | 35.0% |
| GTTATGTGAAATGTGACACA+TGG | - | chr8_2:2504998-2505017 | Msa1227400:intron | 35.0% | |
| GCTAATCTCTAAACTGAGTC+AGG | + | chr8_2:2501763-2501782 | None:intergenic | 40.0% | |
| TCAGAAGCTCTTCGATAGAA+AGG | + | chr8_2:2501885-2501904 | None:intergenic | 40.0% | |
| GGTATATATGAAGGGCAAAG+CGG | + | chr8_2:2501970-2501989 | None:intergenic | 40.0% | |
| CCACGATTGGAAGAAATGAA+GGG | + | chr8_2:2502014-2502033 | None:intergenic | 40.0% | |
| ACCACGATTGGAAGAAATGA+AGG | + | chr8_2:2502015-2502034 | None:intergenic | 40.0% | |
| ACATGAGTAGTAACCACGAT+TGG | + | chr8_2:2502027-2502046 | None:intergenic | 40.0% | |
| CCATAAAAGCAGCAGAAAAG+TGG | + | chr8_2:2502060-2502079 | None:intergenic | 40.0% | |
| !!! | CCACTTTTCTGCTGCTTTTA+TGG | - | chr8_2:2502057-2502076 | Msa1227400:intron | 40.0% |
| TGTCAGACTTTAACTACCTC+CGG | - | chr8_2:2502537-2502556 | Msa1227400:intron | 40.0% | |
| ! | AGGAGGAAAAGGGGTTATTT+TGG | + | chr8_2:2502631-2502650 | None:intergenic | 40.0% |
| TGTTGAAGTAGGAGGAAAAG+GGG | + | chr8_2:2502640-2502659 | None:intergenic | 40.0% | |
| AGATGGAATGTTGAAGTAGG+AGG | + | chr8_2:2502648-2502667 | None:intergenic | 40.0% | |
| ! | TCACATAAGCTAGGTTGGAT+TGG | + | chr8_2:2502748-2502767 | None:intergenic | 40.0% |
| CAGTTTCACATAAGCTAGGT+TGG | + | chr8_2:2502753-2502772 | None:intergenic | 40.0% | |
| TCATCCACATAGACAAGCAA+TGG | + | chr8_2:2502872-2502891 | None:intergenic | 40.0% | |
| TGTCTATGTGGATGATTACG+GGG | - | chr8_2:2502877-2502896 | Msa1227400:CDS | 40.0% | |
| !! | ACAAGAAAAGGCTCTGAGAA+GGG | + | chr8_2:2503007-2503026 | None:intergenic | 40.0% |
| ! | AGAGCCTTTTCTTGTCCAAT+AGG | - | chr8_2:2503012-2503031 | Msa1227400:CDS | 40.0% |
| CTGACAGATGTTTGAGTGTT+GGG | + | chr8_2:2503047-2503066 | None:intergenic | 40.0% | |
| ACTGACAGATGTTTGAGTGT+TGG | + | chr8_2:2503048-2503067 | None:intergenic | 40.0% | |
| ! | ATCTTTACTGTTTCTTGGCG+TGG | - | chr8_2:2503088-2503107 | Msa1227400:intron | 40.0% |
| TCCGCTTCAAAGGAAAAATG+GGG | + | chr8_2:2503133-2503152 | None:intergenic | 40.0% | |
| AGTGTGATATTCCGCTTCAA+AGG | + | chr8_2:2503143-2503162 | None:intergenic | 40.0% | |
| TAAAGGGAACAACAAGTTCC+TGG | + | chr8_2:2503210-2503229 | None:intergenic | 40.0% | |
| ! | CAAGAGTACAAGTGCAGTAA+AGG | + | chr8_2:2503227-2503246 | None:intergenic | 40.0% |
| AATGAATATACAAACCGGGG+AGG | - | chr8_2:2503357-2503376 | Msa1227400:intron | 40.0% | |
| ATGAATATACAAACCGGGGA+GGG | - | chr8_2:2503358-2503377 | Msa1227400:intron | 40.0% | |
| ! | GTTTGTTAAAGGAGGAAGCT+GGG | + | chr8_2:2503468-2503487 | None:intergenic | 40.0% |
| !! | AGTTTGTTAAAGGAGGAAGC+TGG | + | chr8_2:2503469-2503488 | None:intergenic | 40.0% |
| TATGTTTAACACGCCCAGTT+TGG | + | chr8_2:2503545-2503564 | None:intergenic | 40.0% | |
| ATACACTCTCCAACTTAAGG+AGG | - | chr8_2:2503562-2503581 | Msa1227400:intron | 40.0% | |
| TACACTCTCCAACTTAAGGA+GGG | - | chr8_2:2503563-2503582 | Msa1227400:intron | 40.0% | |
| ATCAATGTCACACTCGCTAA+AGG | + | chr8_2:2503763-2503782 | None:intergenic | 40.0% | |
| GCTGCCATCAATAGTAGAAA+AGG | - | chr8_2:2503972-2503991 | Msa1227400:intron | 40.0% | |
| ! | GAAGTTGGTTCTTGATGCTA+TGG | - | chr8_2:2504041-2504060 | Msa1227400:intron | 40.0% |
| GCTTCGATGAATTGTTATCC+AGG | - | chr8_2:2504909-2504928 | Msa1227400:intron | 40.0% | |
| CGATGAATTGTTATCCAGGA+TGG | - | chr8_2:2504913-2504932 | Msa1227400:intron | 40.0% | |
| ! | GCATTTTCACAAAACCATCC+TGG | + | chr8_2:2504930-2504949 | None:intergenic | 40.0% |
| CTATAGTGCTAAAACCAGCA+AGG | + | chr8_2:2505181-2505200 | None:intergenic | 40.0% | |
| CTTCCAAGTGTATAACCACA+TGG | - | chr8_2:2505234-2505253 | Msa1227400:five_prime_UTR | 40.0% | |
| TCACCATGTGGTTATACACT+TGG | + | chr8_2:2505240-2505259 | None:intergenic | 40.0% | |
| AAACAGAGAGAAGGAAGCAG+AGG | - | chr8_2:2501799-2501818 | Msa1227400:three_prime_UTR | 45.0% | |
| CCCTTCATTTCTTCCAATCG+TGG | - | chr8_2:2502011-2502030 | Msa1227400:intron | 45.0% | |
| GACCCATCTAGACACTAACA+CGG | - | chr8_2:2502260-2502279 | Msa1227400:intron | 45.0% | |
| GTCCGTGTTAGTGTCTAGAT+GGG | + | chr8_2:2502265-2502284 | None:intergenic | 45.0% | |
| TGTCCGTGTTAGTGTCTAGA+TGG | + | chr8_2:2502266-2502285 | None:intergenic | 45.0% | |
| AATGTCCGTGCGTCATATAG+TGG | - | chr8_2:2502405-2502424 | Msa1227400:intron | 45.0% | |
| ATGTCCGTGCGTCATATAGT+GGG | - | chr8_2:2502406-2502425 | Msa1227400:intron | 45.0% | |
| ACTACCTCCGGAATGAACTT+CGG | - | chr8_2:2502549-2502568 | Msa1227400:intron | 45.0% | |
| TAATCCGAAGTTCATTCCGG+AGG | + | chr8_2:2502556-2502575 | None:intergenic | 45.0% | |
| AACTTTCTGTGACTCGCTCT+AGG | - | chr8_2:2502773-2502792 | Msa1227400:intron | 45.0% | |
| !! | TGACTCGCTCTAGGTTTTAG+TGG | - | chr8_2:2502782-2502801 | Msa1227400:intron | 45.0% |
| GTCTATGTGGATGATTACGG+GGG | - | chr8_2:2502878-2502897 | Msa1227400:CDS | 45.0% | |
| !! | CAAGAAAAGGCTCTGAGAAG+GGG | + | chr8_2:2503006-2503025 | None:intergenic | 45.0% |
| !! | GACAAGAAAAGGCTCTGAGA+AGG | + | chr8_2:2503008-2503027 | None:intergenic | 45.0% |
| !! | AGATGTTTGAGTGTTGGGAC+AGG | + | chr8_2:2503042-2503061 | None:intergenic | 45.0% |
| !! | GCCCCATTTTTCCTTTGAAG+CGG | - | chr8_2:2503129-2503148 | Msa1227400:intron | 45.0% |
| GAACCATTGGAGTTCACAAG+CGG | + | chr8_2:2503176-2503195 | None:intergenic | 45.0% | |
| AACAAGTTCCTGGCGAATGT+AGG | + | chr8_2:2503200-2503219 | None:intergenic | 45.0% | |
| AGGCAATGTGACAAGCTGAA+TGG | + | chr8_2:2503261-2503280 | None:intergenic | 45.0% | |
| TTTCAGTATGTGTGGCCACT+AGG | + | chr8_2:2503339-2503358 | None:intergenic | 45.0% | |
| TGAATATACAAACCGGGGAG+GGG | - | chr8_2:2503359-2503378 | Msa1227400:intron | 45.0% | |
| ACACTCTCCAACTTAAGGAG+GGG | - | chr8_2:2503564-2503583 | Msa1227400:intron | 45.0% | |
| GAGTGGGGAACAATTGAAAG+TGG | - | chr8_2:2504103-2504122 | Msa1227400:intron | 45.0% | |
| TATGCGTTATCAGAGTAGGC+AGG | - | chr8_2:2504432-2504451 | Msa1227400:intron | 45.0% | |
| !! | TCGAAGAGCTTCTGAAGCTG+AGG | - | chr8_2:2501890-2501909 | Msa1227400:exon | 50.0% |
| GAAGGGCAAAGCGGTTGAAT+CGG | + | chr8_2:2501961-2501980 | None:intergenic | 50.0% | |
| TAACACGGACACTGATACGC+CGG | - | chr8_2:2502275-2502294 | Msa1227400:intron | 50.0% | |
| ! | CGTAATCATAGGCGTCGTGT+CGG | - | chr8_2:2502338-2502357 | Msa1227400:intron | 50.0% |
| GCACGGACATTCCTCAGATT+AGG | + | chr8_2:2502396-2502415 | None:intergenic | 50.0% | |
| TGTCCGTGCGTCATATAGTG+GGG | - | chr8_2:2502407-2502426 | Msa1227400:intron | 50.0% | |
| GTTGGGACAGGAAGACCTAT+TGG | + | chr8_2:2503030-2503049 | None:intergenic | 50.0% | |
| TTGGAGTTCACAAGCGGTAG+AGG | + | chr8_2:2503170-2503189 | None:intergenic | 50.0% | |
| CTACCGCTTGTGAACTCCAA+TGG | - | chr8_2:2503170-2503189 | Msa1227400:intron | 50.0% | |
| GGCGAATGTAGGTGAACCAT+TGG | + | chr8_2:2503189-2503208 | None:intergenic | 50.0% | |
| ATGGTTCACCTACATTCGCC+AGG | - | chr8_2:2503189-2503208 | Msa1227400:intron | 50.0% | |
| GAATATACAAACCGGGGAGG+GGG | - | chr8_2:2503360-2503379 | Msa1227400:intron | 50.0% | |
| TGTTAAAGGAGGAAGCTGGG+AGG | + | chr8_2:2503465-2503484 | None:intergenic | 50.0% | |
| ACACACACCCCTCCTTAAGT+TGG | + | chr8_2:2503574-2503593 | None:intergenic | 50.0% | |
| TTATGAGCTGTTGCGACTGC+TGG | - | chr8_2:2503649-2503668 | Msa1227400:intron | 50.0% | |
| ! | CGACTGCTGGAGTTGGTTAA+CGG | - | chr8_2:2503662-2503681 | Msa1227400:intron | 50.0% |
| ! | GACTGCTGGAGTTGGTTAAC+GGG | - | chr8_2:2503663-2503682 | Msa1227400:intron | 50.0% |
| TTGACCACAGGTCAAAGCAC+AGG | - | chr8_2:2505044-2505063 | Msa1227400:intron | 50.0% | |
| TGTTCCTGTGCTTTGACCTG+TGG | + | chr8_2:2505051-2505070 | None:intergenic | 50.0% | |
| !! | CGAAATCTGTTTGGCCTTGC+TGG | - | chr8_2:2505164-2505183 | Msa1227400:five_prime_UTR | 50.0% |
| TCCTCAGATTAGGCGCGTCT+CGG | + | chr8_2:2502386-2502405 | None:intergenic | 55.0% | |
| GTCCGTGCGTCATATAGTGG+GGG | - | chr8_2:2502408-2502427 | Msa1227400:intron | 55.0% | |
| CACCCCCACTATATGACGCA+CGG | + | chr8_2:2502413-2502432 | None:intergenic | 55.0% | |
| GGGGGACTCCCTTAATGAGA+TGG | - | chr8_2:2502896-2502915 | Msa1227400:intron | 55.0% | |
| AGGGGGATATGTGGTGACTC+AGG | - | chr8_2:2503377-2503396 | Msa1227400:intron | 55.0% | |
| GGTCAAAGCACAGGAACAGC+TGG | - | chr8_2:2505053-2505072 | Msa1227400:intron | 55.0% | |
| ! | GATTAGGCGCGTCTCGGTGT+CGG | + | chr8_2:2502380-2502399 | None:intergenic | 60.0% |
| ACCGAGACGCGCCTAATCTG+AGG | - | chr8_2:2502382-2502401 | Msa1227400:intron | 60.0% | |
| AAACCGGGGAGGGGGATATG+TGG | - | chr8_2:2503368-2503387 | Msa1227400:intron | 60.0% | |
| TCACCACATATCCCCCTCCC+CGG | + | chr8_2:2503374-2503393 | None:intergenic | 60.0% | |
| GCTGTTGCGACTGCTGGAGT+TGG | - | chr8_2:2503655-2503674 | Msa1227400:intron | 60.0% | |
| CGGACACTGATACGCCGGCA+CGG | - | chr8_2:2502280-2502299 | Msa1227400:intron | 65.0% | |
| TGTGTGTGTGCGCGCGCGTT+AGG | - | chr8_2:2503587-2503606 | Msa1227400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 2501686 | 2505312 | 2501686 | ID=Msa1227400;Name=Msa1227400 |
| chr8_2 | mRNA | 2501686 | 2505312 | 2501686 | ID=Msa1227400-mRNA-1;Parent=Msa1227400;Name=Msa1227400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=151|1|1|1|1|1|5|211|116 |
| chr8_2 | exon | 2501686 | 2501944 | 2501686 | ID=Msa1227400-mRNA-1:exon:693;Parent=Msa1227400-mRNA-1 |
| chr8_2 | exon | 2502640 | 2502732 | 2502640 | ID=Msa1227400-mRNA-1:exon:692;Parent=Msa1227400-mRNA-1 |
| chr8_2 | exon | 2502811 | 2502902 | 2502811 | ID=Msa1227400-mRNA-1:exon:691;Parent=Msa1227400-mRNA-1 |
| chr8_2 | exon | 2503005 | 2503047 | 2503005 | ID=Msa1227400-mRNA-1:exon:690;Parent=Msa1227400-mRNA-1 |
| chr8_2 | exon | 2505087 | 2505312 | 2505087 | ID=Msa1227400-mRNA-1:exon:689;Parent=Msa1227400-mRNA-1 |
| chr8_2 | five_prime_UTR | 2505162 | 2505312 | 2505162 | ID=Msa1227400-mRNA-1:five_prime_utr;Parent=Msa1227400-mRNA-1 |
| chr8_2 | CDS | 2505087 | 2505161 | 2505087 | ID=Msa1227400-mRNA-1:cds;Parent=Msa1227400-mRNA-1 |
| chr8_2 | CDS | 2503005 | 2503047 | 2503005 | ID=Msa1227400-mRNA-1:cds;Parent=Msa1227400-mRNA-1 |
| chr8_2 | CDS | 2502811 | 2502902 | 2502811 | ID=Msa1227400-mRNA-1:cds;Parent=Msa1227400-mRNA-1 |
| chr8_2 | CDS | 2502640 | 2502732 | 2502640 | ID=Msa1227400-mRNA-1:cds;Parent=Msa1227400-mRNA-1 |
| chr8_2 | CDS | 2501897 | 2501944 | 2501897 | ID=Msa1227400-mRNA-1:cds;Parent=Msa1227400-mRNA-1 |
| chr8_2 | three_prime_UTR | 2501686 | 2501896 | 2501686 | ID=Msa1227400-mRNA-1:three_prime_utr;Parent=Msa1227400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
