Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005798.t1 | KEH43362.1 | 81 | 459 | 39 | 1 | 1 | 459 | 1 | 411 | 1.60E-206 | 728.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005798.t1 | Q9FFU7 | 30.0 | 447 | 274 | 13 | 7 | 429 | 7 | 438 | 1.9e-46 | 188.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005798.t1 | A0A072VNK9 | 81.0 | 459 | 39 | 1 | 1 | 459 | 1 | 411 | 1.1e-206 | 728.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005798.t1 | MTR_1g090903 | 80.610 | 459 | 41 | 1 | 1 | 459 | 1 | 411 | 0.0 | 698 |
MS.gene005798.t1 | MTR_1g090907 | 69.048 | 462 | 133 | 6 | 1 | 459 | 1 | 455 | 0.0 | 618 |
MS.gene005798.t1 | MTR_2g048140 | 67.532 | 462 | 141 | 6 | 1 | 459 | 1 | 456 | 0.0 | 608 |
MS.gene005798.t1 | MTR_3g448340 | 35.853 | 463 | 273 | 12 | 4 | 453 | 3 | 454 | 2.81e-79 | 254 |
MS.gene005798.t1 | MTR_5g080150 | 33.835 | 399 | 219 | 8 | 7 | 398 | 5 | 365 | 4.63e-61 | 204 |
MS.gene005798.t1 | MTR_3g049530 | 29.752 | 484 | 241 | 14 | 4 | 458 | 3 | 416 | 3.53e-45 | 162 |
MS.gene005798.t1 | MTR_1g071060 | 78.889 | 90 | 19 | 0 | 37 | 126 | 7 | 96 | 2.33e-41 | 142 |
MS.gene005798.t1 | MTR_7g029260 | 39.640 | 111 | 66 | 1 | 322 | 431 | 49 | 159 | 3.74e-16 | 77.8 |
MS.gene005798.t1 | MTR_2g072530 | 21.042 | 480 | 300 | 15 | 7 | 456 | 13 | 443 | 2.62e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005798.t1 | AT5G54820 | 29.978 | 447 | 274 | 13 | 7 | 429 | 7 | 438 | 3.94e-53 | 185 |
MS.gene005798.t1 | AT1G56400 | 30.189 | 424 | 272 | 11 | 7 | 417 | 13 | 425 | 9.11e-53 | 184 |
MS.gene005798.t1 | AT3G62230 | 28.416 | 461 | 311 | 13 | 7 | 457 | 8 | 459 | 3.90e-51 | 180 |
MS.gene005798.t1 | AT3G29830 | 31.435 | 439 | 268 | 17 | 7 | 427 | 8 | 431 | 5.49e-47 | 169 |
MS.gene005798.t1 | AT3G29830 | 30.524 | 439 | 273 | 16 | 7 | 427 | 8 | 432 | 8.85e-45 | 162 |
MS.gene005798.t1 | AT1G56400 | 30.508 | 354 | 223 | 10 | 75 | 417 | 43 | 384 | 3.55e-42 | 155 |
MS.gene005798.t1 | AT2G17305 | 35.616 | 146 | 84 | 5 | 297 | 439 | 106 | 244 | 7.19e-17 | 80.9 |
MS.gene005798.t1 | AT3G28410 | 23.706 | 367 | 238 | 13 | 4 | 360 | 25 | 359 | 4.61e-13 | 71.2 |
Find 65 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAAATACTTCAAGTATTC+TGG | 0.119443 | 1.1:-66627802 | MS.gene005798:CDS |
TTACAGACCTTGAGAAATTT+TGG | 0.162868 | 1.1:-66627168 | MS.gene005798:CDS |
AAGTCAACAAGTTATATTTA+AGG | 0.205513 | 1.1:-66627334 | MS.gene005798:intron |
TTCATTTCTCTAATCCTAAA+TGG | 0.208872 | 1.1:-66628167 | MS.gene005798:CDS |
AAATCATTCTCATTCCATTT+AGG | 0.218782 | 1.1:+66628153 | None:intergenic |
TGCACTCAAAGACCTTTCTT+TGG | 0.273300 | 1.1:-66628013 | MS.gene005798:CDS |
AGCAACAAGTCCTAAGTTCT+TGG | 0.287063 | 1.1:+66627068 | None:intergenic |
TTTCTCAAGGTCTGTAAGAT+AGG | 0.287636 | 1.1:+66627174 | None:intergenic |
CCGAAGTTGAATCGACAAAA+AGG | 0.297834 | 1.1:+66628370 | None:intergenic |
TACTTGAAGTATTTAAGATT+TGG | 0.310198 | 1.1:+66627808 | None:intergenic |
GCACTCAAAGACCTTTCTTT+GGG | 0.333998 | 1.1:-66628012 | MS.gene005798:CDS |
TCTGAAGAGGTGTTGGGATT+TGG | 0.338041 | 1.1:-66627920 | MS.gene005798:CDS |
TCTACCTCTTCTATAACATT+TGG | 0.363653 | 1.1:+66627748 | None:intergenic |
CTCAAAGATATTGTACAACT+TGG | 0.380226 | 1.1:-66627886 | MS.gene005798:CDS |
ATGCTTGCAAAATACTTTGA+AGG | 0.385463 | 1.1:-66627122 | MS.gene005798:CDS |
TTAAATACTTCAAGTATTCT+GGG | 0.388380 | 1.1:-66627801 | MS.gene005798:CDS |
GATAAACATGTGTTGGCAAT+TGG | 0.395256 | 1.1:+66628109 | None:intergenic |
TCTAATGAAAGGGAAAGCTT+TGG | 0.395771 | 1.1:-66627044 | MS.gene005798:CDS |
GCACCAAAGTTAAGAAAATT+CGG | 0.399622 | 1.1:+66628033 | None:intergenic |
ATGCATAAATATGAGCTTTG+TGG | 0.400472 | 1.1:-66627411 | MS.gene005798:CDS |
GCTGCAAACCGTTAGAATCT+TGG | 0.403821 | 1.1:+66627645 | None:intergenic |
AACAGATTAATATTAAGTTA+TGG | 0.414219 | 1.1:-66627021 | MS.gene005798:CDS |
TGCAAATTCTCTGAACGCTC+TGG | 0.416716 | 1.1:+66626941 | None:intergenic |
ATTTGAGTCTGAAGAGGTGT+TGG | 0.416726 | 1.1:-66627927 | MS.gene005798:CDS |
ATTGCGGGAAGAAGTGATTC+TGG | 0.429320 | 1.1:+66628489 | None:intergenic |
CTTGTTGCTTTCTAATGAAA+GGG | 0.435494 | 1.1:-66627054 | MS.gene005798:CDS |
TTTGAGTCTGAAGAGGTGTT+GGG | 0.435529 | 1.1:-66627926 | MS.gene005798:CDS |
TCAAAGACCTTTCTTTGGGT+TGG | 0.435585 | 1.1:-66628008 | MS.gene005798:CDS |
ATTAAGTTATGGAATGAAGA+TGG | 0.439836 | 1.1:-66627010 | MS.gene005798:CDS |
GAAGAGGTGTTGGGATTTGG+TGG | 0.462276 | 1.1:-66627917 | MS.gene005798:CDS |
TTAAGTTATGGAATGAAGAT+GGG | 0.463289 | 1.1:-66627009 | MS.gene005798:CDS |
TTGTTTCCCCACAAGTTTGA+GGG | 0.465128 | 1.1:+66628241 | None:intergenic |
TAAATGGAATGAGAATGATT+TGG | 0.468215 | 1.1:-66628151 | MS.gene005798:CDS |
ACTTGTTGCTTTCTAATGAA+AGG | 0.474911 | 1.1:-66627055 | MS.gene005798:CDS |
TTCAATAAACTTCATGCCAA+TGG | 0.482452 | 1.1:-66627700 | MS.gene005798:CDS |
TTTCGAACCCTCAAACTTGT+GGG | 0.484700 | 1.1:-66628248 | MS.gene005798:CDS |
AGTATGATAGAAATGATTGC+GGG | 0.485402 | 1.1:+66628474 | None:intergenic |
GAGCCACAAGCCAAGAACTT+AGG | 0.485470 | 1.1:-66627078 | MS.gene005798:CDS |
ATTGTTTCCCCACAAGTTTG+AGG | 0.516839 | 1.1:+66628240 | None:intergenic |
TTCTCAAGGTCTGTAAGATA+GGG | 0.517184 | 1.1:+66627175 | None:intergenic |
CCAACACATGTTTATCAACT+CGG | 0.517316 | 1.1:-66628102 | MS.gene005798:CDS |
CTTCAATCCAACCCAAAGAA+AGG | 0.520129 | 1.1:+66628001 | None:intergenic |
GTTTCGAACCCTCAAACTTG+TGG | 0.531195 | 1.1:-66628249 | MS.gene005798:CDS |
GTTTAAGTCAATGTTCTCAC+CGG | 0.538007 | 1.1:+66628398 | None:intergenic |
CAAAGATGCCAAGATTCTAA+CGG | 0.548910 | 1.1:-66627653 | MS.gene005798:CDS |
AGTCCTAAGTTCTTGGCTTG+TGG | 0.551466 | 1.1:+66627075 | None:intergenic |
TCAAAGATATTGTACAACTT+GGG | 0.557071 | 1.1:-66627885 | MS.gene005798:CDS |
GTCACTAGGTCACCTGCAGA+TGG | 0.558055 | 1.1:+66627486 | None:intergenic |
CAGTATTTGACATAGTCCAT+TGG | 0.560520 | 1.1:+66627684 | None:intergenic |
CCGAGTTGATAAACATGTGT+TGG | 0.566603 | 1.1:+66628102 | None:intergenic |
TTGAGAATTTGAGTCTGAAG+AGG | 0.567770 | 1.1:-66627933 | MS.gene005798:CDS |
TCACTAAAATTATATTCATG+TGG | 0.568924 | 1.1:-66628066 | MS.gene005798:CDS |
GCGTTTGCCAAAATTTCTCA+AGG | 0.569849 | 1.1:+66627161 | None:intergenic |
GTTAAGGATACATGTTGCAA+CGG | 0.571660 | 1.1:+66628446 | None:intergenic |
GAGAAAACTTGTTAATTCGA+CGG | 0.572982 | 1.1:+66628277 | None:intergenic |
TGGTTAAGGATACAACAATC+CGG | 0.589501 | 1.1:-66628417 | MS.gene005798:CDS |
AAGTCCAAATGTTATAGAAG+AGG | 0.593335 | 1.1:-66627752 | MS.gene005798:CDS |
TAAATACTTCAAGTATTCTG+GGG | 0.613240 | 1.1:-66627800 | MS.gene005798:CDS |
GGTTTGCAGCTATCTACTCC+AGG | 0.619785 | 1.1:-66627632 | MS.gene005798:intron |
GTAAACGTTGTGCACGTCGA+CGG | 0.623132 | 1.1:+66626972 | None:intergenic |
TTCGAACCCTCAAACTTGTG+GGG | 0.628166 | 1.1:-66628247 | MS.gene005798:CDS |
TAAGTTATGGAATGAAGATG+GGG | 0.628981 | 1.1:-66627008 | MS.gene005798:CDS |
GAGTATGATAGAAATGATTG+CGG | 0.639552 | 1.1:+66628473 | None:intergenic |
ACATGTTTATCAACTCGGAT+CGG | 0.640451 | 1.1:-66628097 | MS.gene005798:CDS |
GTTGCTTTCGTGACACAACG+CGG | 0.780634 | 1.1:-66628207 | MS.gene005798:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAGATTAATATTAAGTTA+TGG | - | chr1.1:66628429-66628448 | MS.gene005798:CDS | 15.0% |
!! | AAGTCAACAAGTTATATTTA+AGG | - | chr1.1:66628116-66628135 | MS.gene005798:CDS | 20.0% |
!! | TCACTAAAATTATATTCATG+TGG | - | chr1.1:66627384-66627403 | MS.gene005798:CDS | 20.0% |
!! | TTAAATACTTCAAGTATTCT+GGG | - | chr1.1:66627649-66627668 | MS.gene005798:CDS | 20.0% |
!!! | TACAGTGATATTTGTTATTA+AGG | - | chr1.1:66627895-66627914 | MS.gene005798:CDS | 20.0% |
!!! | TACTTGAAGTATTTAAGATT+TGG | + | chr1.1:66627645-66627664 | None:intergenic | 20.0% |
!!! | TTTATTGAATTTTGTTTCTG+TGG | + | chr1.1:66627739-66627758 | None:intergenic | 20.0% |
! | AAATCATTCTCATTCCATTT+AGG | + | chr1.1:66627300-66627319 | None:intergenic | 25.0% |
! | ATCAATAAAATTAGTGTACC+TGG | + | chr1.1:66627839-66627858 | None:intergenic | 25.0% |
! | ATTAAGTTATGGAATGAAGA+TGG | - | chr1.1:66628440-66628459 | MS.gene005798:CDS | 25.0% |
! | CATGTATCCTTAACAAAAAA+TGG | - | chr1.1:66627013-66627032 | MS.gene005798:CDS | 25.0% |
! | CTTAAATACTTCAAGTATTC+TGG | - | chr1.1:66627648-66627667 | MS.gene005798:CDS | 25.0% |
! | TAAATACTTCAAGTATTCTG+GGG | - | chr1.1:66627650-66627669 | MS.gene005798:CDS | 25.0% |
! | TAAATGGAATGAGAATGATT+TGG | - | chr1.1:66627299-66627318 | MS.gene005798:intron | 25.0% |
! | TCAAAGATATTGTACAACTT+GGG | - | chr1.1:66627565-66627584 | MS.gene005798:intron | 25.0% |
! | TCCTTAACAAAAAATGGTTA+AGG | - | chr1.1:66627019-66627038 | MS.gene005798:CDS | 25.0% |
! | TTAAGTTATGGAATGAAGAT+GGG | - | chr1.1:66628441-66628460 | MS.gene005798:CDS | 25.0% |
! | TTCATTTCTCTAATCCTAAA+TGG | - | chr1.1:66627283-66627302 | MS.gene005798:intron | 25.0% |
!! | AATTAACAAGTTTTCTCTCA+CGG | - | chr1.1:66627179-66627198 | MS.gene005798:CDS | 25.0% |
!! | TGTTTTCTCGTATATATTAC+AGG | - | chr1.1:66628241-66628260 | MS.gene005798:CDS | 25.0% |
!!! | TCATCGACTTTATCAAAAAT+TGG | - | chr1.1:66627133-66627152 | MS.gene005798:CDS | 25.0% |
!!! | TCCTTAACCATTTTTTGTTA+AGG | + | chr1.1:66627023-66627042 | None:intergenic | 25.0% |
!!! | TCTTTTGTTATGCACAAAAA+AGG | - | chr1.1:66627936-66627955 | MS.gene005798:CDS | 25.0% |
AAGTCCAAATGTTATAGAAG+AGG | - | chr1.1:66627698-66627717 | MS.gene005798:CDS | 30.0% | |
ACAACTTGGGTTAAAAAGAT+TGG | - | chr1.1:66627578-66627597 | MS.gene005798:intron | 30.0% | |
AGTATGATAGAAATGATTGC+GGG | + | chr1.1:66626979-66626998 | None:intergenic | 30.0% | |
ATGCATAAATATGAGCTTTG+TGG | - | chr1.1:66628039-66628058 | MS.gene005798:CDS | 30.0% | |
ATGCTTGCAAAATACTTTGA+AGG | - | chr1.1:66628328-66628347 | MS.gene005798:CDS | 30.0% | |
CTCAAAGATATTGTACAACT+TGG | - | chr1.1:66627564-66627583 | MS.gene005798:intron | 30.0% | |
GAGTATGATAGAAATGATTG+CGG | + | chr1.1:66626980-66626999 | None:intergenic | 30.0% | |
GCACCAAAGTTAAGAAAATT+CGG | + | chr1.1:66627420-66627439 | None:intergenic | 30.0% | |
TAAGTTATGGAATGAAGATG+GGG | - | chr1.1:66628442-66628461 | MS.gene005798:CDS | 30.0% | |
TCTACCTCTTCTATAACATT+TGG | + | chr1.1:66627705-66627724 | None:intergenic | 30.0% | |
TTCAATAAACTTCATGCCAA+TGG | - | chr1.1:66627750-66627769 | MS.gene005798:CDS | 30.0% | |
! | ATGCCGAATTTTCTTAACTT+TGG | - | chr1.1:66627414-66627433 | MS.gene005798:CDS | 30.0% |
! | TTACAGACCTTGAGAAATTT+TGG | - | chr1.1:66628282-66628301 | MS.gene005798:CDS | 30.0% |
!! | ACTTGTTGCTTTCTAATGAA+AGG | - | chr1.1:66628395-66628414 | MS.gene005798:CDS | 30.0% |
!! | CTTGTTGCTTTCTAATGAAA+GGG | - | chr1.1:66628396-66628415 | MS.gene005798:CDS | 30.0% |
!! | GAGAAAACTTGTTAATTCGA+CGG | + | chr1.1:66627176-66627195 | None:intergenic | 30.0% |
!!! | AACGTTTTAAGAGTATTGCT+GGG | + | chr1.1:66627477-66627496 | None:intergenic | 30.0% |
!!! | AATGTGAGTTTTTCAAGCAA+CGG | + | chr1.1:66628090-66628109 | None:intergenic | 30.0% |
ACATGTTTATCAACTCGGAT+CGG | - | chr1.1:66627353-66627372 | MS.gene005798:CDS | 35.0% | |
CAAAGATGCCAAGATTCTAA+CGG | - | chr1.1:66627797-66627816 | MS.gene005798:CDS | 35.0% | |
CAGTATTTGACATAGTCCAT+TGG | + | chr1.1:66627769-66627788 | None:intergenic | 35.0% | |
CCAACACATGTTTATCAACT+CGG | - | chr1.1:66627348-66627367 | MS.gene005798:CDS | 35.0% | |
GTTAAGGATACATGTTGCAA+CGG | + | chr1.1:66627007-66627026 | None:intergenic | 35.0% | |
GTTGCTTGAAAAACTCACAT+TGG | - | chr1.1:66628089-66628108 | MS.gene005798:CDS | 35.0% | |
GTTTAAGTCAATGTTCTCAC+CGG | + | chr1.1:66627055-66627074 | None:intergenic | 35.0% | |
TCTAATGAAAGGGAAAGCTT+TGG | - | chr1.1:66628406-66628425 | MS.gene005798:CDS | 35.0% | |
TGGTTAAGGATACAACAATC+CGG | - | chr1.1:66627033-66627052 | MS.gene005798:CDS | 35.0% | |
TTCTCAAGGTCTGTAAGATA+GGG | + | chr1.1:66628278-66628297 | None:intergenic | 35.0% | |
TTGAGAATTTGAGTCTGAAG+AGG | - | chr1.1:66627517-66627536 | MS.gene005798:intron | 35.0% | |
TTTCTCAAGGTCTGTAAGAT+AGG | + | chr1.1:66628279-66628298 | None:intergenic | 35.0% | |
! | GATAAACATGTGTTGGCAAT+TGG | + | chr1.1:66627344-66627363 | None:intergenic | 35.0% |
! | TTTTTGTACTCACTGTCACT+AGG | + | chr1.1:66627981-66628000 | None:intergenic | 35.0% |
!!! | ATGTGAGTTTTTCAAGCAAC+GGG | + | chr1.1:66628089-66628108 | None:intergenic | 35.0% |
!!! | CAACGTTTTAAGAGTATTGC+TGG | + | chr1.1:66627478-66627497 | None:intergenic | 35.0% |
!!! | CCTTTTTGTCGATTCAACTT+CGG | - | chr1.1:66627080-66627099 | MS.gene005798:CDS | 35.0% |
AGCAACAAGTCCTAAGTTCT+TGG | + | chr1.1:66628385-66628404 | None:intergenic | 40.0% | |
ATTGTTTCCCCACAAGTTTG+AGG | + | chr1.1:66627213-66627232 | None:intergenic | 40.0% | |
CCGAAGTTGAATCGACAAAA+AGG | + | chr1.1:66627083-66627102 | None:intergenic | 40.0% | |
CTTCAATCCAACCCAAAGAA+AGG | + | chr1.1:66627452-66627471 | None:intergenic | 40.0% | |
GCACTCAAAGACCTTTCTTT+GGG | - | chr1.1:66627438-66627457 | MS.gene005798:CDS | 40.0% | |
GCGTTTGCCAAAATTTCTCA+AGG | + | chr1.1:66628292-66628311 | None:intergenic | 40.0% | |
TCAAAGACCTTTCTTTGGGT+TGG | - | chr1.1:66627442-66627461 | MS.gene005798:CDS | 40.0% | |
TGCACTCAAAGACCTTTCTT+TGG | - | chr1.1:66627437-66627456 | MS.gene005798:CDS | 40.0% | |
TTGTTTCCCCACAAGTTTGA+GGG | + | chr1.1:66627212-66627231 | None:intergenic | 40.0% | |
TTTCGAACCCTCAAACTTGT+GGG | - | chr1.1:66627202-66627221 | MS.gene005798:intron | 40.0% | |
! | ATTTGAGTCTGAAGAGGTGT+TGG | - | chr1.1:66627523-66627542 | MS.gene005798:intron | 40.0% |
!! | CCGAGTTGATAAACATGTGT+TGG | + | chr1.1:66627351-66627370 | None:intergenic | 40.0% |
!! | TTTGAGTCTGAAGAGGTGTT+GGG | - | chr1.1:66627524-66627543 | MS.gene005798:intron | 40.0% |
AAAAAGGTTGCTCCATCTGC+AGG | - | chr1.1:66627952-66627971 | MS.gene005798:CDS | 45.0% | |
ATTGCGGGAAGAAGTGATTC+TGG | + | chr1.1:66626964-66626983 | None:intergenic | 45.0% | |
GCTGCAAACCGTTAGAATCT+TGG | + | chr1.1:66627808-66627827 | None:intergenic | 45.0% | |
GTTTCGAACCCTCAAACTTG+TGG | - | chr1.1:66627201-66627220 | MS.gene005798:intron | 45.0% | |
TGCAAATTCTCTGAACGCTC+TGG | + | chr1.1:66628512-66628531 | None:intergenic | 45.0% | |
TTCGAACCCTCAAACTTGTG+GGG | - | chr1.1:66627203-66627222 | MS.gene005798:intron | 45.0% | |
! | AGTCCTAAGTTCTTGGCTTG+TGG | + | chr1.1:66628378-66628397 | None:intergenic | 45.0% |
!! | TCTGAAGAGGTGTTGGGATT+TGG | - | chr1.1:66627530-66627549 | MS.gene005798:intron | 45.0% |
GAGCCACAAGCCAAGAACTT+AGG | - | chr1.1:66628372-66628391 | MS.gene005798:CDS | 50.0% | |
GGTTTGCAGCTATCTACTCC+AGG | - | chr1.1:66627818-66627837 | MS.gene005798:CDS | 50.0% | |
GTAAACGTTGTGCACGTCGA+CGG | + | chr1.1:66628481-66628500 | None:intergenic | 50.0% | |
! | GTTGCTTTCGTGACACAACG+CGG | - | chr1.1:66627243-66627262 | MS.gene005798:intron | 50.0% |
!! | GAAGAGGTGTTGGGATTTGG+TGG | - | chr1.1:66627533-66627552 | MS.gene005798:intron | 50.0% |
GTCACTAGGTCACCTGCAGA+TGG | + | chr1.1:66627967-66627986 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 66626925 | 66628547 | 66626925 | ID=MS.gene005798 |
chr1.1 | mRNA | 66626925 | 66628547 | 66626925 | ID=MS.gene005798.t1;Parent=MS.gene005798 |
chr1.1 | exon | 66627633 | 66628547 | 66627633 | ID=MS.gene005798.t1.exon1;Parent=MS.gene005798.t1 |
chr1.1 | CDS | 66627633 | 66628547 | 66627633 | ID=cds.MS.gene005798.t1;Parent=MS.gene005798.t1 |
chr1.1 | exon | 66627335 | 66627514 | 66627335 | ID=MS.gene005798.t1.exon2;Parent=MS.gene005798.t1 |
chr1.1 | CDS | 66627335 | 66627514 | 66627335 | ID=cds.MS.gene005798.t1;Parent=MS.gene005798.t1 |
chr1.1 | exon | 66626925 | 66627209 | 66626925 | ID=MS.gene005798.t1.exon3;Parent=MS.gene005798.t1 |
chr1.1 | CDS | 66626925 | 66627209 | 66626925 | ID=cds.MS.gene005798.t1;Parent=MS.gene005798.t1 |
Gene Sequence |
Protein sequence |