Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75903.t1 | XP_003595473.1 | 81 | 457 | 28 | 2 | 1 | 399 | 1 | 456 | 3.70E-204 | 720.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75903.t1 | Q9C7X8 | 31.4 | 347 | 212 | 11 | 10 | 341 | 16 | 351 | 4.4e-36 | 153.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75903.t1 | G7ISV8 | 81.0 | 457 | 28 | 2 | 1 | 399 | 1 | 456 | 2.7e-204 | 720.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75903.t1 | MTR_2g048140 | 69.978 | 463 | 68 | 5 | 1 | 399 | 1 | 456 | 0.0 | 601 |
MS.gene75903.t1 | MTR_1g090907 | 61.688 | 462 | 107 | 5 | 1 | 399 | 1 | 455 | 0.0 | 511 |
MS.gene75903.t1 | MTR_1g090903 | 57.995 | 419 | 148 | 6 | 1 | 399 | 1 | 411 | 5.83e-150 | 431 |
MS.gene75903.t1 | MTR_5g080150 | 35.405 | 370 | 205 | 7 | 5 | 342 | 3 | 370 | 6.88e-60 | 199 |
MS.gene75903.t1 | MTR_3g448340 | 38.961 | 308 | 173 | 8 | 5 | 305 | 4 | 303 | 7.09e-59 | 198 |
MS.gene75903.t1 | MTR_1g071060 | 74.444 | 90 | 23 | 0 | 40 | 129 | 7 | 96 | 1.62e-39 | 136 |
MS.gene75903.t1 | MTR_3g049530 | 31.507 | 365 | 170 | 12 | 5 | 366 | 4 | 291 | 1.59e-29 | 119 |
MS.gene75903.t1 | MTR_3g023630 | 24.675 | 385 | 224 | 16 | 4 | 365 | 5 | 346 | 1.30e-12 | 68.9 |
MS.gene75903.t1 | MTR_2g072530 | 25.781 | 128 | 90 | 2 | 7 | 134 | 13 | 135 | 1.50e-11 | 66.2 |
MS.gene75903.t1 | MTR_8g468810 | 25.938 | 320 | 202 | 12 | 5 | 310 | 23 | 321 | 3.75e-11 | 64.3 |
MS.gene75903.t1 | MTR_8g468810 | 26.415 | 318 | 195 | 12 | 5 | 301 | 23 | 322 | 4.60e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75903.t1 | AT1G56400 | 31.672 | 341 | 207 | 11 | 16 | 341 | 22 | 351 | 1.05e-40 | 150 |
MS.gene75903.t1 | AT3G29830 | 34.194 | 310 | 180 | 12 | 10 | 304 | 11 | 311 | 1.84e-40 | 149 |
MS.gene75903.t1 | AT3G29830 | 34.194 | 310 | 180 | 12 | 10 | 304 | 11 | 311 | 2.39e-40 | 149 |
MS.gene75903.t1 | AT5G54820 | 30.868 | 311 | 193 | 9 | 9 | 304 | 9 | 312 | 6.10e-37 | 140 |
MS.gene75903.t1 | AT1G56400 | 32.130 | 277 | 162 | 10 | 80 | 341 | 45 | 310 | 1.60e-28 | 116 |
MS.gene75903.t1 | AT3G62230 | 26.997 | 363 | 246 | 11 | 6 | 356 | 7 | 362 | 2.83e-28 | 115 |
MS.gene75903.t1 | AT5G56410 | 31.855 | 248 | 143 | 10 | 16 | 248 | 12 | 248 | 1.58e-14 | 75.5 |
MS.gene75903.t1 | AT3G58860 | 24.919 | 309 | 203 | 11 | 1 | 298 | 1 | 291 | 2.91e-12 | 68.6 |
MS.gene75903.t1 | AT5G02920 | 26.606 | 218 | 128 | 5 | 16 | 231 | 37 | 224 | 4.67e-12 | 66.2 |
MS.gene75903.t1 | AT1G61330 | 26.923 | 312 | 199 | 10 | 6 | 310 | 9 | 298 | 7.60e-12 | 67.0 |
MS.gene75903.t1 | AT3G59200 | 25.610 | 328 | 191 | 13 | 10 | 299 | 10 | 322 | 6.44e-11 | 63.9 |
MS.gene75903.t1 | AT3G59200 | 25.982 | 331 | 186 | 14 | 10 | 299 | 10 | 322 | 7.77e-11 | 64.3 |
Find 64 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATCGTTATCTTCCCATTT+TGG | 0.155222 | 2.4:+43030372 | None:intergenic |
CTTAAATACTTCAAATATTC+TGG | 0.168651 | 2.4:-43030024 | MS.gene75903:CDS |
TTGATTTCTTTGATCCAAAA+TGG | 0.176385 | 2.4:-43030386 | MS.gene75903:CDS |
ATGTAGACCTTAAGAAATTT+TGG | 0.214054 | 2.4:-43029318 | MS.gene75903:CDS |
TTGAAGGTGGTAGAAGTAAT+TGG | 0.250226 | 2.4:-43029256 | MS.gene75903:CDS |
TTTCTTAAGGTCTACATCAT+AGG | 0.260201 | 2.4:+43029324 | None:intergenic |
TCATCAACTTTATCACAAAT+TGG | 0.280792 | 2.4:-43030536 | MS.gene75903:CDS |
TGCACTTAAAGACTTATCTT+TGG | 0.283963 | 2.4:-43030232 | MS.gene75903:CDS |
TCTTGAGAAGTGTTGGAATT+TGG | 0.285867 | 2.4:-43030139 | MS.gene75903:CDS |
GAATTTGGCGAACTTTGATT+TGG | 0.291195 | 2.4:-43030124 | MS.gene75903:CDS |
TTACTTCAGATATAAATGTT+AGG | 0.319721 | 2.4:-43029993 | MS.gene75903:CDS |
TCCCTAGCCGCGGCATTAAC+AGG | 0.323207 | 2.4:-43030503 | MS.gene75903:CDS |
CGGAGAAATCATGAAGGATT+TGG | 0.330294 | 2.4:+43029902 | None:intergenic |
TATTTGAAGTATTTAAGATT+TGG | 0.333013 | 2.4:+43030030 | None:intergenic |
TGTTGCTTTCGCAACACAAC+GGG | 0.334493 | 2.4:-43030427 | MS.gene75903:CDS |
CGTTTGCAGTTATCTACTTC+AGG | 0.345166 | 2.4:-43029863 | MS.gene75903:intron |
TCTTATGCAAGGAAAAGTTT+TGG | 0.354339 | 2.4:-43029194 | MS.gene75903:CDS |
GCACTTAAAGACTTATCTTT+GGG | 0.370481 | 2.4:-43030231 | MS.gene75903:CDS |
CTTCAATGAAAACAACTTTG+TGG | 0.387816 | 2.4:-43030601 | MS.gene75903:CDS |
AGTCATAAGTTCTTCGTTTG+TGG | 0.396856 | 2.4:+43029225 | None:intergenic |
GAGTTTGCCAAAATTTCTTA+AGG | 0.400757 | 2.4:+43029311 | None:intergenic |
ACTGCAAACGGTTAGAATCT+TGG | 0.425579 | 2.4:+43029876 | None:intergenic |
AATTTGGCGAACTTTGATTT+GGG | 0.426916 | 2.4:-43030123 | MS.gene75903:CDS |
TACTTCAGATATAAATGTTA+GGG | 0.428980 | 2.4:-43029992 | MS.gene75903:CDS |
TGTTCTTGTTGTGGCTTCTT+CGG | 0.433584 | 2.4:+43030677 | None:intergenic |
GTTTGAGTCTTGAGAAGTGT+TGG | 0.441647 | 2.4:-43030146 | MS.gene75903:CDS |
TTCTTAAGGTCTACATCATA+GGG | 0.468849 | 2.4:+43029325 | None:intergenic |
ACCACTTGGATTAACAAGAT+TGG | 0.469749 | 2.4:-43030094 | MS.gene75903:CDS |
ACCTGTTAATGCCGCGGCTA+GGG | 0.471379 | 2.4:+43030502 | None:intergenic |
TGATTTCTTTGATCCAAAAT+GGG | 0.472630 | 2.4:-43030385 | MS.gene75903:CDS |
TTGTTTCCCCACAAGTTTGA+GGG | 0.476639 | 2.4:+43030460 | None:intergenic |
GAAACAATTGCAAGAAGAAG+TGG | 0.491313 | 2.4:+43030711 | None:intergenic |
TATCGAACCCTCAAACTTGT+GGG | 0.494549 | 2.4:-43030467 | MS.gene75903:CDS |
CTTGTTGTGGCTTCTTCGGT+GGG | 0.501917 | 2.4:+43030681 | None:intergenic |
TTGTGGCTTCTTCGGTGGGT+AGG | 0.514264 | 2.4:+43030685 | None:intergenic |
ACTTGTTGCTTTCTTATGCA+AGG | 0.514283 | 2.4:-43029205 | MS.gene75903:CDS |
TCTTGTTGTGGCTTCTTCGG+TGG | 0.517399 | 2.4:+43030680 | None:intergenic |
AAGGATAGATGTTCTTGTTG+TGG | 0.519897 | 2.4:+43030668 | None:intergenic |
CCAACACATGTTTATCAACT+CGG | 0.525652 | 2.4:-43030321 | MS.gene75903:CDS |
AACAAATTAATATTAAGTTG+TGG | 0.540079 | 2.4:-43029171 | MS.gene75903:CDS |
CTGAAGTAGATAACTGCAAA+CGG | 0.540402 | 2.4:+43029864 | None:intergenic |
ATTGTTTCCCCACAAGTTTG+AGG | 0.540471 | 2.4:+43030459 | None:intergenic |
TCGCTAAAACTGTATTCTTG+TGG | 0.545270 | 2.4:-43030285 | MS.gene75903:CDS |
AACCTGTTAATGCCGCGGCT+AGG | 0.547285 | 2.4:+43030501 | None:intergenic |
TTAAAGACTTATCTTTGGGT+CGG | 0.547624 | 2.4:-43030227 | MS.gene75903:CDS |
GTGTTGCTTTCGCAACACAA+CGG | 0.559307 | 2.4:-43030428 | MS.gene75903:CDS |
ACTTGGATTAACAAGATTGG+TGG | 0.562210 | 2.4:-43030091 | MS.gene75903:CDS |
ACCAATCTTGTTAATCCAAG+TGG | 0.566249 | 2.4:+43030093 | None:intergenic |
CCGAGTTGATAAACATGTGT+TGG | 0.566603 | 2.4:+43030321 | None:intergenic |
AACCATGGCAAAAGATAACA+TGG | 0.570974 | 2.4:-43030757 | None:intergenic |
AAATGTTAGGGCTATAGAAG+AGG | 0.577818 | 2.4:-43029980 | MS.gene75903:CDS |
ATATCGAACCCTCAAACTTG+TGG | 0.582748 | 2.4:-43030468 | MS.gene75903:CDS |
AACGGTTAGAATCTTGGCGG+CGG | 0.607837 | 2.4:+43029882 | None:intergenic |
GATTTGGGAGATGAACCACT+TGG | 0.617804 | 2.4:-43030108 | MS.gene75903:CDS |
GCAAACGGTTAGAATCTTGG+CGG | 0.622750 | 2.4:+43029879 | None:intergenic |
ATCGCACACTTCCCTAGCCG+CGG | 0.632187 | 2.4:-43030513 | MS.gene75903:CDS |
AAGCATTGAGGAAACACTCG+AGG | 0.661638 | 2.4:+43029289 | None:intergenic |
ATCGAACCCTCAAACTTGTG+GGG | 0.663466 | 2.4:-43030466 | MS.gene75903:CDS |
GAGAAAACCTGTTAATGCCG+CGG | 0.665328 | 2.4:+43030496 | None:intergenic |
TGGCGGCGGAGAAATCATGA+AGG | 0.685071 | 2.4:+43029896 | None:intergenic |
GAATCAGAATTCGATGAACG+TGG | 0.701292 | 2.4:-43029937 | MS.gene75903:CDS |
AAGTTGTGGAATGAAGATGA+TGG | 0.727970 | 2.4:-43029157 | MS.gene75903:CDS |
GTTGCTTTCGCAACACAACG+GGG | 0.731720 | 2.4:-43030426 | MS.gene75903:CDS |
GGTAAAGAAGAATTTCGACG+TGG | 0.767396 | 2.4:-43029136 | MS.gene75903:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCGTTAATATATAGTTATA+TGG | - | chr2.4:43030421-43030440 | MS.gene75903:CDS | 15.0% |
!!! | AACAAATTAATATTAAGTTG+TGG | - | chr2.4:43030654-43030673 | MS.gene75903:CDS | 15.0% |
!!! | TATTTGAAGTATTTAAGATT+TGG | + | chr2.4:43029798-43029817 | None:intergenic | 15.0% |
!! | ATTTGCATTGTACATATATT+AGG | - | chr2.4:43030178-43030197 | MS.gene75903:CDS | 20.0% |
!! | CTTAAATACTTCAAATATTC+TGG | - | chr2.4:43029801-43029820 | MS.gene75903:intron | 20.0% |
!! | TACTTCAGATATAAATGTTA+GGG | - | chr2.4:43029833-43029852 | MS.gene75903:intron | 20.0% |
!! | TTACTTCAGATATAAATGTT+AGG | - | chr2.4:43029832-43029851 | MS.gene75903:intron | 20.0% |
! | AATGTCGGAAGTAAATTAAT+AGG | + | chr2.4:43030019-43030038 | None:intergenic | 25.0% |
! | ATGCATTAATATGAACTTTG+TGG | - | chr2.4:43030275-43030294 | MS.gene75903:CDS | 25.0% |
! | ATGCTTGAAAAATACTTTGA+AGG | - | chr2.4:43030553-43030572 | MS.gene75903:CDS | 25.0% |
! | TCATCAACTTTATCACAAAT+TGG | - | chr2.4:43029289-43029308 | MS.gene75903:CDS | 25.0% |
! | TGATTTCTTTGATCCAAAAT+GGG | - | chr2.4:43029440-43029459 | MS.gene75903:intron | 25.0% |
! | TGTTTGCTTGTATATATTAC+AGG | - | chr2.4:43030466-43030485 | MS.gene75903:CDS | 25.0% |
! | TTGATTTCTTTGATCCAAAA+TGG | - | chr2.4:43029439-43029458 | MS.gene75903:intron | 25.0% |
!! | ATGTAGACCTTAAGAAATTT+TGG | - | chr2.4:43030507-43030526 | MS.gene75903:CDS | 25.0% |
!! | TTCCGACATTGATTAAATAT+GGG | - | chr2.4:43030029-43030048 | MS.gene75903:CDS | 25.0% |
!!! | AAAGTATTTTTCAAGCATTG+AGG | + | chr2.4:43030551-43030570 | None:intergenic | 25.0% |
AAGTCCACAAGTTATATTTG+AGG | - | chr2.4:43030352-43030371 | MS.gene75903:CDS | 30.0% | |
ATTGCTTGAAAAACTCACAT+TGG | - | chr2.4:43030325-43030344 | MS.gene75903:CDS | 30.0% | |
CTTCAATGAAAACAACTTTG+TGG | - | chr2.4:43029224-43029243 | MS.gene75903:CDS | 30.0% | |
GAGTTTGCCAAAATTTCTTA+AGG | + | chr2.4:43030517-43030536 | None:intergenic | 30.0% | |
GCACTTAAAGACTTATCTTT+GGG | - | chr2.4:43029594-43029613 | MS.gene75903:intron | 30.0% | |
TGCACTTAAAGACTTATCTT+TGG | - | chr2.4:43029593-43029612 | MS.gene75903:intron | 30.0% | |
TTAAAGACTTATCTTTGGGT+CGG | - | chr2.4:43029598-43029617 | MS.gene75903:intron | 30.0% | |
TTCAAGATGTGATTATTTGC+TGG | - | chr2.4:43030146-43030165 | MS.gene75903:CDS | 30.0% | |
TTCTTAAGGTCTACATCATA+GGG | + | chr2.4:43030503-43030522 | None:intergenic | 30.0% | |
TTTCTTAAGGTCTACATCAT+AGG | + | chr2.4:43030504-43030523 | None:intergenic | 30.0% | |
! | AAATCGTTATCTTCCCATTT+TGG | + | chr2.4:43029456-43029475 | None:intergenic | 30.0% |
! | AATTTGGCGAACTTTGATTT+GGG | - | chr2.4:43029702-43029721 | MS.gene75903:intron | 30.0% |
! | ACTTTTAGTCAAAGCTCAAA+AGG | - | chr2.4:43030721-43030740 | MS.gene75903:CDS | 30.0% |
! | ATTGAAGTCGATGTTTTCTT+CGG | + | chr2.4:43029211-43029230 | None:intergenic | 30.0% |
! | CTTCCGACATTGATTAAATA+TGG | - | chr2.4:43030028-43030047 | MS.gene75903:CDS | 30.0% |
! | CTTGAAAAATACTTTGAAGG+TGG | - | chr2.4:43030556-43030575 | MS.gene75903:CDS | 30.0% |
! | CTTTTAGTCAAAGCTCAAAA+GGG | - | chr2.4:43030722-43030741 | MS.gene75903:CDS | 30.0% |
! | TCCGACATTGATTAAATATG+GGG | - | chr2.4:43030030-43030049 | MS.gene75903:CDS | 30.0% |
! | TCTTATGCAAGGAAAAGTTT+TGG | - | chr2.4:43030631-43030650 | MS.gene75903:CDS | 30.0% |
!!! | AATGTGAGTTTTTCAAGCAA+TGG | + | chr2.4:43030326-43030345 | None:intergenic | 30.0% |
!!! | ATGTGAGTTTTTCAAGCAAT+GGG | + | chr2.4:43030325-43030344 | None:intergenic | 30.0% |
!!! | CCATATCTTTAGCCATTTTT+CGG | + | chr2.4:43029184-43029203 | None:intergenic | 30.0% |
AAATGTTAGGGCTATAGAAG+AGG | - | chr2.4:43029845-43029864 | MS.gene75903:intron | 35.0% | |
AAGGATAGATGTTCTTGTTG+TGG | + | chr2.4:43029160-43029179 | None:intergenic | 35.0% | |
AAGTTGTGGAATGAAGATGA+TGG | - | chr2.4:43030668-43030687 | MS.gene75903:CDS | 35.0% | |
ACCAATCTTGTTAATCCAAG+TGG | + | chr2.4:43029735-43029754 | None:intergenic | 35.0% | |
ACCACTTGGATTAACAAGAT+TGG | - | chr2.4:43029731-43029750 | MS.gene75903:intron | 35.0% | |
ACTTGGATTAACAAGATTGG+TGG | - | chr2.4:43029734-43029753 | MS.gene75903:intron | 35.0% | |
AGTCATAAGTTCTTCGTTTG+TGG | + | chr2.4:43030603-43030622 | None:intergenic | 35.0% | |
ATATATTAGGTCGTTCCATC+TGG | - | chr2.4:43030191-43030210 | MS.gene75903:CDS | 35.0% | |
CATCTATCCTTACCGAAAAA+TGG | - | chr2.4:43029169-43029188 | MS.gene75903:CDS | 35.0% | |
CCAACACATGTTTATCAACT+CGG | - | chr2.4:43029504-43029523 | MS.gene75903:intron | 35.0% | |
CCGAAAAATGGCTAAAGATA+TGG | - | chr2.4:43029181-43029200 | MS.gene75903:CDS | 35.0% | |
CTGAAGTAGATAACTGCAAA+CGG | + | chr2.4:43029964-43029983 | None:intergenic | 35.0% | |
CTGACCTCAAATATAACTTG+TGG | + | chr2.4:43030359-43030378 | None:intergenic | 35.0% | |
GAAACAATTGCAAGAAGAAG+TGG | + | chr2.4:43029117-43029136 | None:intergenic | 35.0% | |
GAATTTGGCGAACTTTGATT+TGG | - | chr2.4:43029701-43029720 | MS.gene75903:intron | 35.0% | |
GCCCCATATTTAATCAATGT+CGG | + | chr2.4:43030034-43030053 | None:intergenic | 35.0% | |
TCGCTAAAACTGTATTCTTG+TGG | - | chr2.4:43029540-43029559 | MS.gene75903:intron | 35.0% | |
TTGAAGGTGGTAGAAGTAAT+TGG | - | chr2.4:43030569-43030588 | MS.gene75903:CDS | 35.0% | |
! | ATGGGGCTAGTATATTTAGT+TGG | - | chr2.4:43030047-43030066 | MS.gene75903:CDS | 35.0% |
! | GCGCAAGATTTTCTTAACTT+TGG | - | chr2.4:43029570-43029589 | MS.gene75903:intron | 35.0% |
! | TGGGAAGATAACGATTTTGA+TGG | - | chr2.4:43029459-43029478 | MS.gene75903:intron | 35.0% |
!! | ACTTGTTGCTTTCTTATGCA+AGG | - | chr2.4:43030620-43030639 | MS.gene75903:CDS | 35.0% |
!! | TCTTGAGAAGTGTTGGAATT+TGG | - | chr2.4:43029686-43029705 | MS.gene75903:intron | 35.0% |
!!! | TCTTTAGCCATTTTTCGGTA+AGG | + | chr2.4:43029179-43029198 | None:intergenic | 35.0% |
ACTGCAAACGGTTAGAATCT+TGG | + | chr2.4:43029952-43029971 | None:intergenic | 40.0% | |
ATATCGAACCCTCAAACTTG+TGG | - | chr2.4:43029357-43029376 | MS.gene75903:intron | 40.0% | |
ATTGTTTCCCCACAAGTTTG+AGG | + | chr2.4:43029369-43029388 | None:intergenic | 40.0% | |
CGGAGAAATCATGAAGGATT+TGG | + | chr2.4:43029926-43029945 | None:intergenic | 40.0% | |
CGTTTGCAGTTATCTACTTC+AGG | - | chr2.4:43029962-43029981 | MS.gene75903:CDS | 40.0% | |
GAATCAGAATTCGATGAACG+TGG | - | chr2.4:43029888-43029907 | MS.gene75903:CDS | 40.0% | |
GGTAAAGAAGAATTTCGACG+TGG | - | chr2.4:43030689-43030708 | MS.gene75903:CDS | 40.0% | |
TATCGAACCCTCAAACTTGT+GGG | - | chr2.4:43029358-43029377 | MS.gene75903:intron | 40.0% | |
TTGTTTCCCCACAAGTTTGA+GGG | + | chr2.4:43029368-43029387 | None:intergenic | 40.0% | |
! | AAAGCACTTTGCATCTTCAC+CGG | + | chr2.4:43030224-43030243 | None:intergenic | 40.0% |
! | GTTTGAGTCTTGAGAAGTGT+TGG | - | chr2.4:43029679-43029698 | MS.gene75903:intron | 40.0% |
! | TGTTCTTGTTGTGGCTTCTT+CGG | + | chr2.4:43029151-43029170 | None:intergenic | 40.0% |
!! | CCGAGTTGATAAACATGTGT+TGG | + | chr2.4:43029507-43029526 | None:intergenic | 40.0% |
ATCGAACCCTCAAACTTGTG+GGG | - | chr2.4:43029359-43029378 | MS.gene75903:intron | 45.0% | |
GAGAAAACCTGTTAATGCCG+CGG | + | chr2.4:43029332-43029351 | None:intergenic | 45.0% | |
GATTTGGGAGATGAACCACT+TGG | - | chr2.4:43029717-43029736 | MS.gene75903:intron | 45.0% | |
GCAAACGGTTAGAATCTTGG+CGG | + | chr2.4:43029949-43029968 | None:intergenic | 45.0% | |
!! | AAGCATTGAGGAAACACTCG+AGG | + | chr2.4:43030539-43030558 | None:intergenic | 45.0% |
!! | GTGTTGCTTTCGCAACACAA+CGG | - | chr2.4:43029397-43029416 | MS.gene75903:intron | 45.0% |
!! | TGTTGCTTTCGCAACACAAC+GGG | - | chr2.4:43029398-43029417 | MS.gene75903:intron | 45.0% |
AACGGTTAGAATCTTGGCGG+CGG | + | chr2.4:43029946-43029965 | None:intergenic | 50.0% | |
CGTTCCATCTGGAGATGAAC+CGG | - | chr2.4:43030202-43030221 | MS.gene75903:CDS | 50.0% | |
! | CTTGTTGTGGCTTCTTCGGT+GGG | + | chr2.4:43029147-43029166 | None:intergenic | 50.0% |
! | GTTGCTTTCGCAACACAACG+GGG | - | chr2.4:43029399-43029418 | MS.gene75903:intron | 50.0% |
! | TCTTGTTGTGGCTTCTTCGG+TGG | + | chr2.4:43029148-43029167 | None:intergenic | 50.0% |
!! | TTCACCGGTTCATCTCCAGA+TGG | + | chr2.4:43030209-43030228 | None:intergenic | 50.0% |
AACCTGTTAATGCCGCGGCT+AGG | + | chr2.4:43029327-43029346 | None:intergenic | 55.0% | |
ACCTGTTAATGCCGCGGCTA+GGG | + | chr2.4:43029326-43029345 | None:intergenic | 55.0% | |
TGGCGGCGGAGAAATCATGA+AGG | + | chr2.4:43029932-43029951 | None:intergenic | 55.0% | |
TTGTGGCTTCTTCGGTGGGT+AGG | + | chr2.4:43029143-43029162 | None:intergenic | 55.0% | |
ATCGCACACTTCCCTAGCCG+CGG | - | chr2.4:43029312-43029331 | MS.gene75903:CDS | 60.0% | |
TCCCTAGCCGCGGCATTAAC+AGG | - | chr2.4:43029322-43029341 | MS.gene75903:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 43029072 | 43030775 | 43029072 | ID=MS.gene75903 |
chr2.4 | mRNA | 43029072 | 43030775 | 43029072 | ID=MS.gene75903.t1;Parent=MS.gene75903 |
chr2.4 | exon | 43029864 | 43030775 | 43029864 | ID=MS.gene75903.t1.exon1;Parent=MS.gene75903.t1 |
chr2.4 | CDS | 43029864 | 43030775 | 43029864 | ID=cds.MS.gene75903.t1;Parent=MS.gene75903.t1 |
chr2.4 | exon | 43029072 | 43029359 | 43029072 | ID=MS.gene75903.t1.exon2;Parent=MS.gene75903.t1 |
chr2.4 | CDS | 43029072 | 43029359 | 43029072 | ID=cds.MS.gene75903.t1;Parent=MS.gene75903.t1 |
Gene Sequence |
Protein sequence |