AlfalfaGEDB | MS.gene79176

M. sativa cultivar XinJiangDaYe / MS.gene79176

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF08387.13

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79176.t1	XP_004490493.1	54.4	463	167	4	1	461	1	421	3.00E-128	468.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79176.t1	Q9C7X8	33.0	424	268	6	6	422	13	427	4.0e-52	207.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79176.t1	A0A1S2XMC6	54.4	463	167	4	1	461	1	421	2.2e-128	468.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene79176	MS.gene028696	PPI
MS.gene047137	MS.gene79176	PPI
MS.gene34704	MS.gene79176	PPI
MS.gene79176	MS.gene20329	PPI
MS.gene79176	MS.gene34802	PPI
MS.gene79176	MS.gene006730	PPI
MS.gene79176	MS.gene94457	PPI
MS.gene79176	MS.gene041325	PPI
MS.gene79176	MS.gene95902	PPI
MS.gene79176	MS.gene73831	PPI
MS.gene79176	MS.gene54959	PPI
MS.gene79176	MS.gene34706	PPI
MS.gene79176	MS.gene006692	PPI
MS.gene79176	MS.gene045439	PPI
MS.gene79176	MS.gene66626	PPI
MS.gene79176	MS.gene51795	PPI
MS.gene79176	MS.gene34766	PPI
MS.gene79176	MS.gene055882	PPI
MS.gene79176	MS.gene29873	PPI
MS.gene79176	MS.gene045441	PPI
MS.gene79176	MS.gene003455	PPI
MS.gene79176	MS.gene071257	PPI
MS.gene79176	MS.gene035630	PPI
MS.gene79176	MS.gene031577	PPI
MS.gene79176	MS.gene010060	PPI
MS.gene79176	MS.gene069763	PPI
MS.gene79176	MS.gene047136	PPI
MS.gene79176	MS.gene040413	PPI
MS.gene79176	MS.gene97999	PPI
MS.gene79176	MS.gene25299	PPI
MS.gene79176	MS.gene63105	PPI
MS.gene045441	MS.gene79176	PPI
MS.gene006692	MS.gene79176	PPI
MS.gene79176	MS.gene63259	PPI
MS.gene79176	MS.gene072000	PPI
MS.gene79176	MS.gene60525	PPI
MS.gene79176	MS.gene006736	PPI
MS.gene79176	MS.gene033899	PPI
MS.gene79176	MS.gene007876	PPI
MS.gene79176	MS.gene021295	PPI
MS.gene79176	MS.gene033695	PPI
MS.gene79176	MS.gene045451	PPI
MS.gene79176	MS.gene005798	PPI
MS.gene79176	MS.gene91886	PPI
MS.gene79176	MS.gene053312	PPI
MS.gene79176	MS.gene78164	PPI
MS.gene79176	MS.gene033897	PPI
MS.gene79176	MS.gene25348	PPI
MS.gene79176	MS.gene031575	PPI
MS.gene79176	MS.gene006727	PPI
MS.gene79176	MS.gene72958	PPI
MS.gene79176	MS.gene25386	PPI
MS.gene79176	MS.gene25450	PPI
MS.gene79176	MS.gene34216	PPI
MS.gene79176	MS.gene29498	PPI
MS.gene79176	MS.gene96120	PPI
MS.gene79176	MS.gene22129	PPI
MS.gene79176	MS.gene63257	PPI
MS.gene79176	MS.gene045449	PPI
MS.gene79176	MS.gene63111	PPI
MS.gene79176	MS.gene50153	PPI
MS.gene79176	MS.gene64988	PPI
MS.gene79176	MS.gene91885	PPI
MS.gene79176	MS.gene34804	PPI
MS.gene79176	MS.gene60523	PPI
MS.gene79176	MS.gene055877	PPI
MS.gene79176	MS.gene25352	PPI
MS.gene055883	MS.gene79176	PPI
MS.gene79176	MS.gene045437	PPI
MS.gene79176	MS.gene01653	PPI
MS.gene79176	MS.gene053311	PPI
MS.gene79176	MS.gene045448	PPI
MS.gene79176	MS.gene041326	PPI
MS.gene34738	MS.gene79176	PPI
MS.gene79176	MS.gene003456	PPI
MS.gene96357	MS.gene79176	PPI
MS.gene79176	MS.gene062537	PPI
MS.gene79176	MS.gene005799	PPI
MS.gene79176	MS.gene25298	PPI
MS.gene79176	MS.gene25448	PPI
MS.gene63177	MS.gene79176	PPI
MS.gene79176	MS.gene23706	PPI
MS.gene79176	MS.gene25344	PPI
MS.gene79176	MS.gene34801	PPI
MS.gene79176	MS.gene34740	PPI
MS.gene79176	MS.gene032861	PPI
MS.gene79176	MS.gene25347	PPI
MS.gene79176	MS.gene20330	PPI
MS.gene21278	MS.gene79176	PPI
MS.gene79176	MS.gene25415	PPI
MS.gene79176	MS.gene024262	PPI
MS.gene34707	MS.gene79176	PPI
MS.gene79176	MS.gene045452	PPI
MS.gene79176	MS.gene032862	PPI
MS.gene79176	MS.gene031570	PPI
MS.gene79176	MS.gene96357	PPI
MS.gene79176	MS.gene75904	PPI
MS.gene79176	MS.gene34703	PPI
MS.gene79176	MS.gene94460	PPI
MS.gene79176	MS.gene63094	PPI
MS.gene79176	MS.gene045446	PPI
MS.gene79176	MS.gene041323	PPI
MS.gene79176	MS.gene63221	PPI
MS.gene79176	MS.gene031603	PPI
MS.gene73831	MS.gene79176	PPI
MS.gene79176	MS.gene51793	PPI
MS.gene79176	MS.gene73780	PPI
MS.gene79176	MS.gene72954	PPI
MS.gene79176	MS.gene63222	PPI
MS.gene63213	MS.gene79176	PPI
MS.gene79176	MS.gene99982	PPI
MS.gene79176	MS.gene032852	PPI
MS.gene34824	MS.gene79176	PPI
MS.gene79176	MS.gene63260	PPI
MS.gene64993	MS.gene79176	PPI
MS.gene79176	MS.gene033694	PPI
MS.gene79176	MS.gene032860	PPI
MS.gene79176	MS.gene045772	PPI
MS.gene79176	MS.gene061531	PPI
MS.gene79176	MS.gene69561	PPI
MS.gene79176	MS.gene006723	PPI
MS.gene79176	MS.gene94458	PPI
MS.gene79176	MS.gene54960	PPI
MS.gene79176	MS.gene34825	PPI
MS.gene79176	MS.gene032853	PPI
MS.gene79176	MS.gene25449	PPI
MS.gene79176	MS.gene99980	PPI
MS.gene79176	MS.gene25297	PPI
MS.gene79176	MS.gene25451	PPI
MS.gene79176	MS.gene006725	PPI
MS.gene79176	MS.gene25353	PPI
MS.gene79176	MS.gene29863	PPI
MS.gene79176	MS.gene52136	PPI
MS.gene79176	MS.gene049943	PPI
MS.gene79176	MS.gene069762	PPI
MS.gene79176	MS.gene09996	PPI
MS.gene79176	MS.gene36066	PPI
MS.gene79176	MS.gene63256	PPI
MS.gene79176	MS.gene64989	PPI
MS.gene79176	MS.gene032295	PPI
MS.gene79176	MS.gene061286	PPI
MS.gene79176	MS.gene074346	PPI
MS.gene63113	MS.gene79176	PPI
MS.gene75902	MS.gene79176	PPI
MS.gene79176	MS.gene98001	PPI
MS.gene79176	MS.gene75902	PPI
MS.gene79176	MS.gene64992	PPI
MS.gene79176	MS.gene21278	PPI
MS.gene79176	MS.gene072003	PPI
MS.gene79176	MS.gene63112	PPI
MS.gene79176	MS.gene002112	PPI
MS.gene79176	MS.gene09997	PPI
MS.gene79176	MS.gene75903	PPI
MS.gene79176	MS.gene006728	PPI
MS.gene79176	MS.gene91884	PPI
MS.gene79176	MS.gene031572	PPI
MS.gene79176	MS.gene065373	PPI
MS.gene79176	MS.gene045440	PPI
MS.gene79176	MS.gene031573	PPI
MS.gene96120	MS.gene79176	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79176.t1	MTR_5g080150	53.735	415	152	6	1	413	1	377	2.49e-137	400
MS.gene79176.t1	MTR_2g048140	38.889	468	268	8	4	470	5	455	1.84e-88	278
MS.gene79176.t1	MTR_1g090907	38.593	469	267	11	4	470	5	454	4.32e-87	274
MS.gene79176.t1	MTR_7g029260	88.148	135	16	0	310	444	34	168	1.63e-79	246
MS.gene79176.t1	MTR_3g448340	35.102	490	272	13	1	472	1	462	3.28e-75	243
MS.gene79176.t1	MTR_1g090903	33.937	442	229	11	31	470	30	410	2.72e-64	213
MS.gene79176.t1	MTR_3g049530	31.062	499	236	14	1	472	1	418	3.54e-50	176
MS.gene79176.t1	MTR_5g080160	53.465	101	45	1	370	470	61	159	1.96e-26	105
MS.gene79176.t1	MTR_5g080160	64.912	57	19	1	1	56	1	57	2.28e-14	71.2
MS.gene79176.t1	MTR_5g066890	59.091	88	34	1	325	412	1	86	1.48e-24	97.4
MS.gene79176.t1	MTR_5g080110	62.687	67	25	0	1	67	1	67	1.16e-20	85.9
MS.gene79176.t1	MTR_4g045900	23.651	482	285	18	5	429	25	480	3.63e-16	81.3
MS.gene79176.t1	MTR_5g066900	47.561	82	28	1	19	100	19	85	6.13e-15	70.5
MS.gene79176.t1	MTR_2g047858	22.374	438	286	13	6	434	115	507	1.35e-13	73.2
MS.gene79176.t1	MTR_5g080120	75.000	40	10	0	325	364	1	40	5.23e-13	63.9
MS.gene79176.t1	MTR_1g071060	38.889	90	54	1	38	127	7	95	3.72e-12	62.8
MS.gene79176.t1	MTR_2g091145	22.523	444	266	16	5	427	20	406	1.73e-11	66.2
MS.gene79176.t1	MTR_1g021825	22.727	440	264	13	6	429	88	467	5.98e-11	65.1
MS.gene79176.t1	MTR_1g021825	22.727	440	264	13	6	429	17	396	6.03e-11	64.7
MS.gene79176.t1	MTR_2g047872	21.381	449	264	15	6	429	23	407	8.94e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79176.t1	AT1G56400	33.023	430	270	8	2	423	9	428	7.34e-63	212
MS.gene79176.t1	AT1G56400	31.395	430	236	9	2	423	9	387	2.40e-51	180
MS.gene79176.t1	AT5G54820	29.915	468	295	12	2	452	3	454	1.93e-50	178
MS.gene79176.t1	AT3G29830	32.063	446	261	15	6	431	8	431	3.95e-49	175
MS.gene79176.t1	AT3G29830	32.000	450	257	15	6	431	8	432	4.75e-49	174
MS.gene79176.t1	AT3G62230	29.234	431	293	7	2	429	4	425	1.11e-47	171
MS.gene79176.t1	AT2G17305	30.939	181	119	3	291	471	95	269	8.97e-24	100
MS.gene79176.t1	AT3G58860	22.989	435	293	13	5	429	6	408	2.13e-16	81.6
MS.gene79176.t1	AT4G03220	23.855	524	298	22	3	471	21	498	5.81e-15	77.4
MS.gene79176.t1	AT4G13985	25.538	372	244	11	2	359	15	367	1.49e-14	76.3
MS.gene79176.t1	AT1G61330	22.926	458	266	18	11	434	15	419	2.95e-14	75.1
MS.gene79176.t1	AT1G16930	22.290	489	301	16	4	468	13	446	5.03e-14	74.3
MS.gene79176.t1	AT1G16930	22.290	489	301	16	4	468	13	446	5.03e-14	74.3
MS.gene79176.t1	AT1G16930	22.290	489	301	16	4	468	13	446	5.03e-14	74.3
MS.gene79176.t1	AT1G69630	23.030	495	291	20	5	470	17	450	1.53e-13	72.8
MS.gene79176.t1	AT3G59000	28.302	212	139	4	5	204	1	211	1.77e-13	72.0
MS.gene79176.t1	AT3G59000	31.538	130	88	1	5	134	1	129	5.55e-13	71.2
MS.gene79176.t1	AT5G22610	23.341	437	275	15	6	431	18	405	5.88e-13	71.2
MS.gene79176.t1	AT3G58900	22.819	447	299	14	5	429	1	423	6.59e-13	70.9
MS.gene79176.t1	AT3G58880	22.654	437	281	13	5	417	2	405	6.67e-13	70.9
MS.gene79176.t1	AT4G13960	23.831	449	262	18	5	418	1	404	7.18e-13	70.9
MS.gene79176.t1	AT4G13960	23.831	449	262	18	5	418	1	404	7.18e-13	70.9
MS.gene79176.t1	AT5G44980	23.620	453	264	17	6	429	4	403	9.11e-13	70.5
MS.gene79176.t1	AT5G44980	23.620	453	264	17	6	429	4	403	9.11e-13	70.5
MS.gene79176.t1	AT5G22610	22.368	456	286	16	6	431	18	435	1.82e-11	66.6
MS.gene79176.t1	AT1G66310	21.721	488	296	16	5	470	18	441	1.87e-11	66.2
MS.gene79176.t1	AT1G66300	20.833	480	300	17	2	452	25	453	1.94e-11	66.2
MS.gene79176.t1	AT1G52650	22.788	452	290	17	5	431	1	418	2.04e-11	66.2
MS.gene79176.t1	AT1G78760	23.989	371	240	13	6	363	16	357	3.15e-11	65.9
MS.gene79176.t1	AT5G53635	23.165	436	287	16	9	430	3	404	3.95e-11	65.5
MS.gene79176.t1	AT5G44980	23.795	332	193	12	6	311	4	301	5.57e-11	63.9
MS.gene79176.t1	AT5G44980	23.795	332	193	12	6	311	4	301	5.57e-11	63.9

Find 60 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATAGAGATTAATGGCTTTA+AGG	0.132329	7.2:+68894120	MS.gene79176:CDS
TTTGCACAAGTTTGAGTTTA+TGG	0.132794	7.2:+68893456	MS.gene79176:CDS
CCTATTTATGTTTATGACTA+TGG	0.243649	7.2:+68892604	MS.gene79176:CDS
CTTTGAGCATCAACAATTTC+AGG	0.243731	7.2:-68892352	None:intergenic
TTCAAATTAGTTGAAGCTTT+TGG	0.244970	7.2:-68894304	None:intergenic
ATGACCTGCTTAAACATTTC+AGG	0.245189	7.2:-68892460	None:intergenic
TGTTGATGAAATACATCTTT+TGG	0.268390	7.2:+68893534	MS.gene79176:CDS
TTCCCTCAAAGAAATATCTT+TGG	0.270717	7.2:+68892690	MS.gene79176:CDS
GAGAAATGGAGTTAAGTATT+TGG	0.273380	7.2:+68892507	MS.gene79176:CDS
CCATAGTCATAAACATAAAT+AGG	0.286870	7.2:-68892604	None:intergenic
AAAAGACAAAGGGGAGAAAA+TGG	0.291797	7.2:-68892221	None:intergenic
AGTGAAGCTATGTGCTATTA+AGG	0.312329	7.2:+68892723	MS.gene79176:CDS
ATAGAGATTAATGGCTTTAA+GGG	0.326199	7.2:+68894121	MS.gene79176:CDS
ATGTTATTCCAGAGATATAT+TGG	0.335890	7.2:+68894050	MS.gene79176:CDS
CGTTTGCAGTTACTTGCTTC+AGG	0.341208	7.2:+68893077	MS.gene79176:CDS
CTAAAGGAGATAGAGATTAA+TGG	0.344050	7.2:+68894112	MS.gene79176:CDS
ATGGTTGATAACAATGAATT+AGG	0.345686	7.2:-68892202	None:intergenic
ACACATTTGTAATCATTTGC+AGG	0.351094	7.2:-68894079	None:intergenic
TTGCACAAGTTTGAGTTTAT+GGG	0.353651	7.2:+68893457	MS.gene79176:CDS
CCATGGGAGTAAACATTGAT+AGG	0.362936	7.2:+68892167	None:intergenic
TCCCTCAAAGAAATATCTTT+GGG	0.372400	7.2:+68892691	MS.gene79176:CDS
TCTGGAATAACATTGTATAT+TGG	0.373604	7.2:-68894040	None:intergenic
TTCCCTTGAGCATGGATGTC+AGG	0.403881	7.2:+68892987	MS.gene79176:CDS
ACCCAAAGATATTTCTTTGA+GGG	0.417663	7.2:-68892692	None:intergenic
CCACTTCTTTAAAAGACAAA+GGG	0.422930	7.2:-68892231	None:intergenic
AGTTCATTGAACTCTATGTT+TGG	0.432595	7.2:-68892304	None:intergenic
GTTTGAGTTTGTTTAAGTGC+TGG	0.444803	7.2:+68892776	MS.gene79176:CDS
ATGTGCTATTAAGGCACTAT+TGG	0.446523	7.2:+68892732	MS.gene79176:CDS
AAACTATCTTTGATCCGAGT+TGG	0.455902	7.2:-68892547	None:intergenic
ATTGGCCAATTGTGAAAAGT+TGG	0.461528	7.2:+68892750	MS.gene79176:CDS
ATTGTGAGACGTTCTAAGTC+GGG	0.463898	7.2:-68893505	None:intergenic
GGGCCTTTCCAATATATCTC+TGG	0.480359	7.2:-68894058	None:intergenic
GTTGCGTCAGCTGTGAGAAA+TGG	0.489194	7.2:+68892493	MS.gene79176:CDS
ATGTGTGAAGTTTAATCTAA+AGG	0.490612	7.2:+68894096	MS.gene79176:CDS
TGATATTCAATCAACTGCAT+TGG	0.494222	7.2:+68892945	MS.gene79176:CDS
AACCCAAAGATATTTCTTTG+AGG	0.497703	7.2:-68892693	None:intergenic
GCCACTTCTTTAAAAGACAA+AGG	0.498718	7.2:-68892232	None:intergenic
CCTATCAATGTTTACTCCCA+TGG	0.499066	7.2:-68892167	None:intergenic
AGTGCCTGAAATGTTTAAGC+AGG	0.499692	7.2:+68892456	MS.gene79176:CDS
TAAAGATGATGTGGTGGGTG+AGG	0.507076	7.2:+68894222	MS.gene79176:CDS
ATTAAGTACTTTCTTATGCG+TGG	0.511283	7.2:+68894166	MS.gene79176:CDS
CACATTTGTAATCATTTGCA+GGG	0.524111	7.2:-68894078	None:intergenic
AAGTGCTGGAATTCAGATGC+TGG	0.524277	7.2:+68892790	MS.gene79176:CDS
CTGAAGCAAGTAACTGCAAA+CGG	0.538481	7.2:-68893076	None:intergenic
GCGTGGGAAGGCCTTGAGAA+AGG	0.551578	7.2:+68894183	MS.gene79176:CDS
TGACCTGACATCCATGCTCA+AGG	0.552492	7.2:-68892990	None:intergenic
AATTGTGAGACGTTCTAAGT+CGG	0.554656	7.2:-68893506	None:intergenic
ATTGATACTCACCTTTCTCA+AGG	0.555139	7.2:-68894194	None:intergenic
GTACTTTCTTATGCGTGGGA+AGG	0.559959	7.2:+68894171	MS.gene79176:CDS
AGTTAATGCCCCAAATCTGA+AGG	0.566076	7.2:+68892885	MS.gene79176:CDS
CAATTTACTTAAAGATGATG+TGG	0.574580	7.2:+68894213	MS.gene79176:CDS
TTAAGTACTTTCTTATGCGT+GGG	0.578371	7.2:+68894167	MS.gene79176:CDS
GACCTGACATCCATGCTCAA+GGG	0.599854	7.2:-68892989	None:intergenic
TTGATTTCACTCATCCAACT+CGG	0.602313	7.2:+68892533	MS.gene79176:CDS
ATTCCAGAGATATATTGGAA+AGG	0.613088	7.2:+68894055	MS.gene79176:CDS
TTTACTTAAAGATGATGTGG+TGG	0.636759	7.2:+68894216	MS.gene79176:CDS
CACTTCTTTAAAAGACAAAG+GGG	0.637411	7.2:-68892230	None:intergenic
TTGTGAGACGTTCTAAGTCG+GGG	0.653118	7.2:-68893504	None:intergenic
TTGGGTGAACATTAGCAAAG+TGG	0.666162	7.2:+68892279	MS.gene79176:CDS
TTACTTAAAGATGATGTGGT+GGG	0.681822	7.2:+68894217	MS.gene79176:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAAATATTTATTAAAA+AGG	-	chr7.2:68893258-68893277	None:intergenic	0.0%
!!	AAAAACTAATTTCATATATT+AGG	+	chr7.2:68893759-68893778	MS.gene79176:intron	10.0%
!!	AAAGAGAAAAATATTATTAA+AGG	-	chr7.2:68893232-68893251	None:intergenic	10.0%
!!	AAGAGAAAAATATTATTAAA+GGG	-	chr7.2:68893231-68893250	None:intergenic	10.0%
!!	TAACTTAAAAATCATATAAA+GGG	-	chr7.2:68893839-68893858	None:intergenic	10.0%
!!!	GTTTTAATTTTTTTTTCAAT+AGG	-	chr7.2:68893977-68893996	None:intergenic	10.0%
!!	CTAACTTAAAAATCATATAA+AGG	-	chr7.2:68893840-68893859	None:intergenic	15.0%
!!!	ATGTATTTCTAGTAAAAAAA+AGG	+	chr7.2:68893862-68893881	MS.gene79176:intron	15.0%
!!!	TATTTCTTTTGAAAATGATT+TGG	+	chr7.2:68893292-68893311	MS.gene79176:intron	15.0%
!!	AAATAAAAACCTTCAGATTT+GGG	-	chr7.2:68892897-68892916	None:intergenic	20.0%
!!	CTAACATTAAGAAGAAAAAA+AGG	-	chr7.2:68893115-68893134	None:intergenic	20.0%
!!	TAAATAAAAACCTTCAGATT+TGG	-	chr7.2:68892898-68892917	None:intergenic	20.0%
!!	TAGAGATTATTTGTTTCATA+TGG	+	chr7.2:68893791-68893810	MS.gene79176:intron	20.0%
!!	TCAATAGGCAAATAAATTAA+GGG	-	chr7.2:68893962-68893981	None:intergenic	20.0%
!!	TTCAATAGGCAAATAAATTA+AGG	-	chr7.2:68893963-68893982	None:intergenic	20.0%
!!!	GTTTTCTATTATTATATTGC+AGG	+	chr7.2:68894009-68894028	MS.gene79176:intron	20.0%
!!!	TGAAGGTTTTTATTTATCAA+GGG	+	chr7.2:68892902-68892921	MS.gene79176:CDS	20.0%
!!!	TTCTATTCTCTCTAAAAATT+GGG	+	chr7.2:68892261-68892280	MS.gene79176:CDS	20.0%
!	AATAAAAACCTTCAGATTTG+GGG	-	chr7.2:68892896-68892915	None:intergenic	25.0%
!	ATGTGTGAAGTTTAATCTAA+AGG	+	chr7.2:68894096-68894115	MS.gene79176:CDS	25.0%
!	ATGTTATTCCAGAGATATAT+TGG	+	chr7.2:68894050-68894069	MS.gene79176:CDS	25.0%
!	CAATTTACTTAAAGATGATG+TGG	+	chr7.2:68894213-68894232	MS.gene79176:CDS	25.0%
!	CCATAGTCATAAACATAAAT+AGG	-	chr7.2:68892607-68892626	None:intergenic	25.0%
!	CCTATTTATGTTTATGACTA+TGG	+	chr7.2:68892604-68892623	MS.gene79176:CDS	25.0%
!!	CTTCTATTCTCTCTAAAAAT+TGG	+	chr7.2:68892260-68892279	MS.gene79176:CDS	25.0%
!!	TCTGGAATAACATTGTATAT+TGG	-	chr7.2:68894043-68894062	None:intergenic	25.0%
!!	TTCAAATTAGTTGAAGCTTT+TGG	-	chr7.2:68894307-68894326	None:intergenic	25.0%
!!	TTTTGGATTTCATGGAAAAA+TGG	+	chr7.2:68892383-68892402	MS.gene79176:CDS	25.0%
!!!	AATAGCATTTTTGGATTTCA+TGG	+	chr7.2:68892375-68892394	MS.gene79176:CDS	25.0%
!!!	ATAGAGATTAATGGCTTTAA+GGG	+	chr7.2:68894121-68894140	MS.gene79176:CDS	25.0%
!!!	ATGGTTGATAACAATGAATT+AGG	-	chr7.2:68892205-68892224	None:intergenic	25.0%
!!!	ATTTTGAAGGAAGAATATTC+TGG	+	chr7.2:68892817-68892836	MS.gene79176:CDS	25.0%
!!!	CTGAAGGTTTTTATTTATCA+AGG	+	chr7.2:68892901-68892920	MS.gene79176:CDS	25.0%
!!!	TGTTGATGAAATACATCTTT+TGG	+	chr7.2:68893534-68893553	MS.gene79176:CDS	25.0%
!!!	TTTTGAAGGAAGAATATTCT+GGG	+	chr7.2:68892818-68892837	MS.gene79176:CDS	25.0%
	AACCCAAAGATATTTCTTTG+AGG	-	chr7.2:68892696-68892715	None:intergenic	30.0%
	ACACATTTGTAATCATTTGC+AGG	-	chr7.2:68894082-68894101	None:intergenic	30.0%
	ACCCAAAGATATTTCTTTGA+GGG	-	chr7.2:68892695-68892714	None:intergenic	30.0%
	AGTTCATTGAACTCTATGTT+TGG	-	chr7.2:68892307-68892326	None:intergenic	30.0%
	ATTAAGTACTTTCTTATGCG+TGG	+	chr7.2:68894166-68894185	MS.gene79176:CDS	30.0%
	ATTCCAGAGATATATTGGAA+AGG	+	chr7.2:68894055-68894074	MS.gene79176:CDS	30.0%
	CACATTTGTAATCATTTGCA+GGG	-	chr7.2:68894081-68894100	None:intergenic	30.0%
	CACGAAGAAAAAAGTTGTAT+CGG	+	chr7.2:68893398-68893417	MS.gene79176:CDS	30.0%
	CTAAAGGAGATAGAGATTAA+TGG	+	chr7.2:68894112-68894131	MS.gene79176:CDS	30.0%
	GAGAAATGGAGTTAAGTATT+TGG	+	chr7.2:68892507-68892526	MS.gene79176:CDS	30.0%
	TCCCTCAAAGAAATATCTTT+GGG	+	chr7.2:68892691-68892710	MS.gene79176:CDS	30.0%
	TGATATTCAATCAACTGCAT+TGG	+	chr7.2:68892945-68892964	MS.gene79176:CDS	30.0%
	TTAAGTACTTTCTTATGCGT+GGG	+	chr7.2:68894167-68894186	MS.gene79176:CDS	30.0%
	TTACTTAAAGATGATGTGGT+GGG	+	chr7.2:68894217-68894236	MS.gene79176:CDS	30.0%
	TTCCCTCAAAGAAATATCTT+TGG	+	chr7.2:68892690-68892709	MS.gene79176:CDS	30.0%
	TTTACTTAAAGATGATGTGG+TGG	+	chr7.2:68894216-68894235	MS.gene79176:CDS	30.0%
!	CACTTCTTTAAAAGACAAAG+GGG	-	chr7.2:68892233-68892252	None:intergenic	30.0%
!	CCACTTCTTTAAAAGACAAA+GGG	-	chr7.2:68892234-68892253	None:intergenic	30.0%
!	GATAGAGATTAATGGCTTTA+AGG	+	chr7.2:68894120-68894139	MS.gene79176:CDS	30.0%
!	TAGTTTTTCTCAAGATGAGT+TGG	+	chr7.2:68892564-68892583	MS.gene79176:CDS	30.0%
!	TATAAAGGGTGATTTGTCAT+AGG	-	chr7.2:68893825-68893844	None:intergenic	30.0%
!	TGCTCAAAGAATAGCATTTT+TGG	+	chr7.2:68892366-68892385	MS.gene79176:CDS	30.0%
!	TTGCACAAGTTTGAGTTTAT+GGG	+	chr7.2:68893457-68893476	MS.gene79176:CDS	30.0%
!	TTTGCACAAGTTTGAGTTTA+TGG	+	chr7.2:68893456-68893475	MS.gene79176:CDS	30.0%
!!!	AGATGCTGGTTTTATTTTGA+AGG	+	chr7.2:68892804-68892823	MS.gene79176:CDS	30.0%
!!!	GTTTTTTGTGTGATATGCTA+AGG	+	chr7.2:68893360-68893379	MS.gene79176:intron	30.0%
	AAAAGACAAAGGGGAGAAAA+TGG	-	chr7.2:68892224-68892243	None:intergenic	35.0%
	AAACTATCTTTGATCCGAGT+TGG	-	chr7.2:68892550-68892569	None:intergenic	35.0%
	ATGACCTGCTTAAACATTTC+AGG	-	chr7.2:68892463-68892482	None:intergenic	35.0%
	ATTGATACTCACCTTTCTCA+AGG	-	chr7.2:68894197-68894216	None:intergenic	35.0%
	ATTGGCCAATTGTGAAAAGT+TGG	+	chr7.2:68892750-68892769	MS.gene79176:CDS	35.0%
	CTTTGAGCATCAACAATTTC+AGG	-	chr7.2:68892355-68892374	None:intergenic	35.0%
	TTGATTTCACTCATCCAACT+CGG	+	chr7.2:68892533-68892552	MS.gene79176:CDS	35.0%
!	AATTGTGAGACGTTCTAAGT+CGG	-	chr7.2:68893509-68893528	None:intergenic	35.0%
!	ACTCTCCAACTTTTCACAAT+TGG	-	chr7.2:68892758-68892777	None:intergenic	35.0%
!	AGTGAAGCTATGTGCTATTA+AGG	+	chr7.2:68892723-68892742	MS.gene79176:CDS	35.0%
!	ATGTGCTATTAAGGCACTAT+TGG	+	chr7.2:68892732-68892751	MS.gene79176:CDS	35.0%
!	GCCACTTCTTTAAAAGACAA+AGG	-	chr7.2:68892235-68892254	None:intergenic	35.0%
!	GTTTGAGTTTGTTTAAGTGC+TGG	+	chr7.2:68892776-68892795	MS.gene79176:CDS	35.0%
!!	CCCTTTGTCTTTTAAAGAAG+TGG	+	chr7.2:68892231-68892250	MS.gene79176:CDS	35.0%
!!	TTTTTCTCAAGATGAGTTGG+TGG	+	chr7.2:68892567-68892586	MS.gene79176:CDS	35.0%
	AGTGCCTGAAATGTTTAAGC+AGG	+	chr7.2:68892456-68892475	MS.gene79176:CDS	40.0%
	AGTTAATGCCCCAAATCTGA+AGG	+	chr7.2:68892885-68892904	MS.gene79176:CDS	40.0%
	CTGAAGCAAGTAACTGCAAA+CGG	-	chr7.2:68893079-68893098	None:intergenic	40.0%
	TTGGGTGAACATTAGCAAAG+TGG	+	chr7.2:68892279-68892298	MS.gene79176:CDS	40.0%
!	ATTGTGAGACGTTCTAAGTC+GGG	-	chr7.2:68893508-68893527	None:intergenic	40.0%
!	CGATTTTGTTGCTAGTGGAA+TGG	+	chr7.2:68892657-68892676	MS.gene79176:CDS	40.0%
	CGTTTGCAGTTACTTGCTTC+AGG	+	chr7.2:68893077-68893096	MS.gene79176:CDS	45.0%
	GGGCCTTTCCAATATATCTC+TGG	-	chr7.2:68894061-68894080	None:intergenic	45.0%
	GTACTTTCTTATGCGTGGGA+AGG	+	chr7.2:68894171-68894190	MS.gene79176:CDS	45.0%
!	CTTGACTTTTCCCTTGAGCA+TGG	+	chr7.2:68892979-68892998	MS.gene79176:CDS	45.0%
!	GCATGCGATTTTGTTGCTAG+TGG	+	chr7.2:68892652-68892671	MS.gene79176:CDS	45.0%
!	TTGTGAGACGTTCTAAGTCG+GGG	-	chr7.2:68893507-68893526	None:intergenic	45.0%
!!	AAGTGCTGGAATTCAGATGC+TGG	+	chr7.2:68892790-68892809	MS.gene79176:CDS	45.0%
!!	TAAAGATGATGTGGTGGGTG+AGG	+	chr7.2:68894222-68894241	MS.gene79176:CDS	45.0%
	GACCTGACATCCATGCTCAA+GGG	-	chr7.2:68892992-68893011	None:intergenic	50.0%
	GTTGCGTCAGCTGTGAGAAA+TGG	+	chr7.2:68892493-68892512	MS.gene79176:CDS	50.0%
	TGACCTGACATCCATGCTCA+AGG	-	chr7.2:68892993-68893012	None:intergenic	50.0%
	TTCCCTTGAGCATGGATGTC+AGG	+	chr7.2:68892987-68893006	MS.gene79176:CDS	50.0%
	GCGTGGGAAGGCCTTGAGAA+AGG	+	chr7.2:68894183-68894202	MS.gene79176:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	68892169	68894345	68892169	ID=MS.gene79176
chr7.2	mRNA	68892169	68894345	68892169	ID=MS.gene79176.t1;Parent=MS.gene79176
chr7.2	exon	68892169	68893098	68892169	ID=MS.gene79176.t1.exon1;Parent=MS.gene79176.t1
chr7.2	CDS	68892169	68893098	68892169	ID=cds.MS.gene79176.t1;Parent=MS.gene79176.t1
chr7.2	exon	68893382	68893555	68893382	ID=MS.gene79176.t1.exon2;Parent=MS.gene79176.t1
chr7.2	CDS	68893382	68893555	68893382	ID=cds.MS.gene79176.t1;Parent=MS.gene79176.t1
chr7.2	exon	68894031	68894345	68894031	ID=MS.gene79176.t1.exon3;Parent=MS.gene79176.t1
chr7.2	CDS	68894031	68894345	68894031	ID=cds.MS.gene79176.t1;Parent=MS.gene79176.t1

Gene Sequence

>MS.gene79176

ATGGGAGTAAACATTGATAGGTTTAGTTCGTTGCCTAATTCATTGTTATCAACCATTTTCTCCCCTTTGTCTTTTAAAGAAGTGGCAAGAACTTCTATTCTCTCTAAAAATTGGGTGAACATTAGCAAAGTGGCACCAAACATAGAGTTCAATGAACTCTTCTTTGTTAAATTTGATCAATCTCCTGAAATTGTTGATGCTCAAAGAATAGCATTTTTGGATTTCATGGAAAAATGGATAAAAGATCGCGCAGAAAATGTCGTTAACAAATTGTCTTTAACAATTTCAGTGCCTGAAATGTTTAAGCAGGTCATAGATCAATTTGTTGCGTCAGCTGTGAGAAATGGAGTTAAGTATTTGGAACTTGATTTCACTCATCCAACTCGGATCAAAGATAGTTTTTCTCAAGATGAGTTGGTGGCTTTGTTTGATTTGCCTATTTATGTTTATGACTATGGTGAACTTGAATCTTTGAAATTGTATGCATGCGATTTTGTTGCTAGTGGAATGGTTAATTTTCATTCCCTCAAAGAAATATCTTTGGGTTGTATGAAAGTGAAGCTATGTGCTATTAAGGCACTATTGGCCAATTGTGAAAAGTTGGAGAGTTTGAGTTTGTTTAAGTGCTGGAATTCAGATGCTGGTTTTATTTTGAAGGAAGAATATTCTGGGTTGAAAAAATTCGTTATCAATAGATGTCAATTTAATACTCTCAAAGTTAATGCCCCAAATCTGAAGGTTTTTATTTATCAAGGGTTGATGACACTTTTTGTTGTTGATATTCAATCAACTGCATTGGATGAAGTTAATCTTGACTTTTCCCTTGAGCATGGATGTCAGGTCAAGCGCTTTGCTGATTCTTATCTTTACTATCTTTTGTTAAATGTCTTTTTTGTTAGAAAAATGACCGTTTGCAGTTACTTGCTTCAGGTACTTTTCTTTACCTTTTTTTCTTCTTAATGTTAGCGTTGTTTTTATCATCGTCGTCATCATCATCATCATCATCATCATCATCATCATTATTATTATTACTACTACTATTATTATTATTATTAATGTCCCTTTAATAATATTTTTCTCTTTTCACCTTTTTAATAAATATTTATTATTACAGTTGCAGAAATATTTCTTTTGAAAATGATTTGGTCAAAAAACTTAAGAAATTGATAATTTATTTTTATATTTCTTAACGTTTTTTGTGTGATATGCTAAGGTTATTTACACTCAAGCACGAAGAAAAAAGTTGTATCGGAAAATGAGTGTGAAGCATTTGATAATGAAGACTGCTTTGCACAAGTTTGAGTTTATGGGAATCTCATTCATGCTAAAGAGTTGCCCCGACTTAGAACGTCTCACAATTGAAATTGTTGATGAAATACATCTTTTGGTAAGTGTTACATAAAATTCATTTGTTTTAATTAATTGTCTATATGTATTATATGCATTTTATTTGTATTTTTTTTTTTACAAAACTTAATTTGTATATATATTTGCAGACTATATAATTTCACAATATGAATTAAAACTATGTTTTAATTTGATTGAATTGATGTGTAAAAGTAAGATAATTTTATATCATTAGTAGACATAAAAAACTAATTTCATATATTAGGTTTATAATCTAGAGATTATTTGTTTCATATGGTTACACTGCCTATGACAAATCACCCTTTATATGATTTTTAAGTTAGATATGTATTTCTAGTAAAAAAAAGGAATATATGTTCAAGATCATATATTTATTTTCATAGTGATTCAACAATTGTGATTGATTAATGATGTAATTAAATCCCTTAATTTATTTGCCTATTGAAAAAAAAATTAAAACACTGAACATTTTGTTTTCTATTATTATATTGCAGGATTATGATCCAATATACAATGTTATTCCAGAGATATATTGGAAAGGCCCTGCAAATGATTACAAATGTGTGAAGTTTAATCTAAAGGAGATAGAGATTAATGGCTTTAAGGGAATTGAAAATGAGTTCACTGTAATTAAGTACTTTCTTATGCGTGGGAAGGCCTTGAGAAAGGTGAGTATCAATTTACTTAAAGATGATGTGGTGGGTGAGGATGCAGATGCACTGTATGTTGCTGCTCGTTGCGAAGTAGAAGAACTTTTGTCGAGTCTTCCAAAAGCTTCAACTAATTTGAAGATTTCAATCTATTACTAA

Protein sequence

>MS.gene79176.t1

MGVNIDRFSSLPNSLLSTIFSPLSFKEVARTSILSKNWVNISKVAPNIEFNELFFVKFDQSPEIVDAQRIAFLDFMEKWIKDRAENVVNKLSLTISVPEMFKQVIDQFVASAVRNGVKYLELDFTHPTRIKDSFSQDELVALFDLPIYVYDYGELESLKLYACDFVASGMVNFHSLKEISLGCMKVKLCAIKALLANCEKLESLSLFKCWNSDAGFILKEEYSGLKKFVINRCQFNTLKVNAPNLKVFIYQGLMTLFVVDIQSTALDEVNLDFSLEHGCQVKRFADSYLYYLLLNVFFVRKMTVCSYLLQVIYTQARRKKLYRKMSVKHLIMKTALHKFEFMGISFMLKSCPDLERLTIEIVDEIHLLDYDPIYNVIPEIYWKGPANDYKCVKFNLKEIEINGFKGIENEFTVIKYFLMRGKALRKVSINLLKDDVVGEDADALYVAARCEVEELLSSLPKASTNLKISIYY