Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60523.t1 | KEH43362.1 | 81 | 459 | 39 | 1 | 1 | 459 | 1 | 411 | 2.10E-206 | 728.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60523.t1 | Q9FFU7 | 30.2 | 447 | 273 | 13 | 7 | 429 | 7 | 438 | 7.5e-48 | 193.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60523.t1 | A0A072VNK9 | 81.0 | 459 | 39 | 1 | 1 | 459 | 1 | 411 | 1.5e-206 | 728.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60523.t1 | MTR_1g090903 | 80.610 | 459 | 41 | 1 | 1 | 459 | 1 | 411 | 0.0 | 698 |
MS.gene60523.t1 | MTR_1g090907 | 69.264 | 462 | 132 | 6 | 1 | 459 | 1 | 455 | 0.0 | 620 |
MS.gene60523.t1 | MTR_2g048140 | 67.749 | 462 | 140 | 6 | 1 | 459 | 1 | 456 | 0.0 | 609 |
MS.gene60523.t1 | MTR_3g448340 | 36.069 | 463 | 272 | 12 | 4 | 453 | 3 | 454 | 9.67e-80 | 255 |
MS.gene60523.t1 | MTR_5g080150 | 34.085 | 399 | 218 | 8 | 7 | 398 | 5 | 365 | 4.63e-63 | 209 |
MS.gene60523.t1 | MTR_3g049530 | 29.959 | 484 | 240 | 14 | 4 | 458 | 3 | 416 | 5.28e-45 | 162 |
MS.gene60523.t1 | MTR_1g071060 | 80.000 | 90 | 18 | 0 | 37 | 126 | 7 | 96 | 1.72e-42 | 145 |
MS.gene60523.t1 | MTR_7g029260 | 39.640 | 111 | 66 | 1 | 322 | 431 | 49 | 159 | 4.20e-16 | 77.8 |
MS.gene60523.t1 | MTR_2g072530 | 21.042 | 480 | 300 | 15 | 7 | 456 | 13 | 443 | 6.66e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60523.t1 | AT5G54820 | 30.201 | 447 | 273 | 13 | 7 | 429 | 7 | 438 | 7.57e-55 | 190 |
MS.gene60523.t1 | AT1G56400 | 30.425 | 424 | 271 | 11 | 7 | 417 | 13 | 425 | 2.87e-54 | 189 |
MS.gene60523.t1 | AT3G62230 | 28.416 | 461 | 311 | 13 | 7 | 457 | 8 | 459 | 3.55e-51 | 180 |
MS.gene60523.t1 | AT3G29830 | 31.663 | 439 | 267 | 17 | 7 | 427 | 8 | 431 | 1.03e-48 | 173 |
MS.gene60523.t1 | AT3G29830 | 30.752 | 439 | 272 | 16 | 7 | 427 | 8 | 432 | 9.85e-47 | 168 |
MS.gene60523.t1 | AT1G56400 | 30.791 | 354 | 222 | 10 | 75 | 417 | 43 | 384 | 5.54e-43 | 157 |
MS.gene60523.t1 | AT2G17305 | 35.616 | 146 | 84 | 5 | 297 | 439 | 106 | 244 | 3.96e-17 | 81.6 |
MS.gene60523.t1 | AT3G28410 | 24.324 | 370 | 232 | 14 | 4 | 360 | 25 | 359 | 1.12e-12 | 70.1 |
Find 65 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAAATACTTCAAGTATTC+TGG | 0.119443 | 1.2:-68435044 | MS.gene60523:CDS |
TTACAGACCTTGAGAAATTT+TGG | 0.162868 | 1.2:-68434410 | MS.gene60523:CDS |
AAGTCAACAAGTTATATTTA+AGG | 0.205513 | 1.2:-68434576 | MS.gene60523:intron |
AAATCATTCTCATTCCATTT+AGG | 0.218782 | 1.2:+68435395 | None:intergenic |
TTGATTTCTCTAATCCTAAA+TGG | 0.228700 | 1.2:-68435409 | MS.gene60523:CDS |
TGCACTCAAAGACCTTTCTT+TGG | 0.273300 | 1.2:-68435255 | MS.gene60523:CDS |
AGCAACAAGTCCTAAGTTCT+TGG | 0.287063 | 1.2:+68434310 | None:intergenic |
TTTCTCAAGGTCTGTAAGAT+AGG | 0.287636 | 1.2:+68434416 | None:intergenic |
CCGAAGTTGAATCGACAAAA+AGG | 0.297834 | 1.2:+68435612 | None:intergenic |
TACTTGAAGTATTTAAGATT+TGG | 0.310198 | 1.2:+68435050 | None:intergenic |
GCACTCAAAGACCTTTCTTT+GGG | 0.333998 | 1.2:-68435254 | MS.gene60523:CDS |
TCTGAAGAGGTGTTGGGATT+TGG | 0.338041 | 1.2:-68435162 | MS.gene60523:CDS |
TCTACCTCTTCTATAACATT+TGG | 0.363653 | 1.2:+68434990 | None:intergenic |
CTCAAAGATATTGTACAACT+TGG | 0.380226 | 1.2:-68435128 | MS.gene60523:CDS |
ATGCTTGCAAAATACTTTGA+AGG | 0.385463 | 1.2:-68434364 | MS.gene60523:CDS |
TTAAATACTTCAAGTATTCT+GGG | 0.388380 | 1.2:-68435043 | MS.gene60523:CDS |
GATAAACATGTGTTGGCAAT+TGG | 0.395256 | 1.2:+68435351 | None:intergenic |
TCTAATGAAAGGGAAAGCTT+TGG | 0.395771 | 1.2:-68434286 | MS.gene60523:CDS |
GCACCAAAGTTAAGAAAATT+CGG | 0.399622 | 1.2:+68435275 | None:intergenic |
ATGCATAAATATGAGCTTTG+TGG | 0.400472 | 1.2:-68434653 | MS.gene60523:CDS |
GCTGCAAACCGTTAGAATCT+TGG | 0.403821 | 1.2:+68434887 | None:intergenic |
AACAGATTAATATTAAGTTA+TGG | 0.414219 | 1.2:-68434263 | MS.gene60523:CDS |
TGCAAATTCTCTGAACGCTC+TGG | 0.416716 | 1.2:+68434183 | None:intergenic |
ATTTGAGTCTGAAGAGGTGT+TGG | 0.416726 | 1.2:-68435169 | MS.gene60523:CDS |
ATTGCGGGAAGAAGTGATTC+TGG | 0.429320 | 1.2:+68435731 | None:intergenic |
CTTGTTGCTTTCTAATGAAA+GGG | 0.435494 | 1.2:-68434296 | MS.gene60523:CDS |
TTTGAGTCTGAAGAGGTGTT+GGG | 0.435529 | 1.2:-68435168 | MS.gene60523:CDS |
TCAAAGACCTTTCTTTGGGT+TGG | 0.435585 | 1.2:-68435250 | MS.gene60523:CDS |
ATTAAGTTATGGAATGAAGA+TGG | 0.439836 | 1.2:-68434252 | MS.gene60523:CDS |
GAAGAGGTGTTGGGATTTGG+TGG | 0.462276 | 1.2:-68435159 | MS.gene60523:CDS |
TTAAGTTATGGAATGAAGAT+GGG | 0.463289 | 1.2:-68434251 | MS.gene60523:CDS |
TTGTTTCCCCACAAGTTTGA+GGG | 0.465128 | 1.2:+68435483 | None:intergenic |
TAAATGGAATGAGAATGATT+TGG | 0.468215 | 1.2:-68435393 | MS.gene60523:CDS |
ACTTGTTGCTTTCTAATGAA+AGG | 0.474911 | 1.2:-68434297 | MS.gene60523:CDS |
TTCAATAAACTTCATGCCAA+TGG | 0.482452 | 1.2:-68434942 | MS.gene60523:CDS |
TTTCGAACCCTCAAACTTGT+GGG | 0.484700 | 1.2:-68435490 | MS.gene60523:CDS |
AGTATGATAGAAATGATTGC+GGG | 0.485402 | 1.2:+68435716 | None:intergenic |
GAGCCACAAGCCAAGAACTT+AGG | 0.485470 | 1.2:-68434320 | MS.gene60523:CDS |
ATTGTTTCCCCACAAGTTTG+AGG | 0.516839 | 1.2:+68435482 | None:intergenic |
TTCTCAAGGTCTGTAAGATA+GGG | 0.517184 | 1.2:+68434417 | None:intergenic |
CCAACACATGTTTATCAACT+CGG | 0.517316 | 1.2:-68435344 | MS.gene60523:CDS |
CTTCAATCCAACCCAAAGAA+AGG | 0.520129 | 1.2:+68435243 | None:intergenic |
GTTTCGAACCCTCAAACTTG+TGG | 0.531195 | 1.2:-68435491 | MS.gene60523:CDS |
GTTTAAGTCAATGTTCTCAC+CGG | 0.538007 | 1.2:+68435640 | None:intergenic |
CAAAGATGCCAAGATTCTAA+CGG | 0.548910 | 1.2:-68434895 | MS.gene60523:CDS |
AGTCCTAAGTTCTTGGCTTG+TGG | 0.551466 | 1.2:+68434317 | None:intergenic |
TCAAAGATATTGTACAACTT+GGG | 0.557071 | 1.2:-68435127 | MS.gene60523:CDS |
GTCACTAGGTCACCTGCAGA+TGG | 0.558055 | 1.2:+68434728 | None:intergenic |
CAGTATTTGACATAGTCCAT+TGG | 0.560520 | 1.2:+68434926 | None:intergenic |
CCGAGTTGATAAACATGTGT+TGG | 0.566603 | 1.2:+68435344 | None:intergenic |
TTGAGAATTTGAGTCTGAAG+AGG | 0.567770 | 1.2:-68435175 | MS.gene60523:CDS |
TCACTAAAATTATATTCATG+TGG | 0.568924 | 1.2:-68435308 | MS.gene60523:CDS |
GCGTTTGCCAAAATTTCTCA+AGG | 0.569849 | 1.2:+68434403 | None:intergenic |
GTTAAGGATACATGTTGCAA+CGG | 0.571660 | 1.2:+68435688 | None:intergenic |
GAGAAAACTTGTTAATTCGA+CGG | 0.572982 | 1.2:+68435519 | None:intergenic |
TGGTTAAGGATACAACAATC+CGG | 0.589501 | 1.2:-68435659 | MS.gene60523:CDS |
AAGTCCAAATGTTATAGAAG+AGG | 0.593335 | 1.2:-68434994 | MS.gene60523:CDS |
TAAATACTTCAAGTATTCTG+GGG | 0.613240 | 1.2:-68435042 | MS.gene60523:CDS |
GGTTTGCAGCTATCTACTCC+AGG | 0.619785 | 1.2:-68434874 | MS.gene60523:intron |
GTAAACGTTGTGCACGTCGA+CGG | 0.623132 | 1.2:+68434214 | None:intergenic |
TTCGAACCCTCAAACTTGTG+GGG | 0.628166 | 1.2:-68435489 | MS.gene60523:CDS |
TAAGTTATGGAATGAAGATG+GGG | 0.628981 | 1.2:-68434250 | MS.gene60523:CDS |
GAGTATGATAGAAATGATTG+CGG | 0.639552 | 1.2:+68435715 | None:intergenic |
ACATGTTTATCAACTCGGAT+CGG | 0.640451 | 1.2:-68435339 | MS.gene60523:CDS |
GTTGCTTTCGTGACACAACG+CGG | 0.780634 | 1.2:-68435449 | MS.gene60523:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAGATTAATATTAAGTTA+TGG | - | chr1.2:68435671-68435690 | MS.gene60523:CDS | 15.0% |
!! | AAGTCAACAAGTTATATTTA+AGG | - | chr1.2:68435358-68435377 | MS.gene60523:CDS | 20.0% |
!! | TCACTAAAATTATATTCATG+TGG | - | chr1.2:68434626-68434645 | MS.gene60523:CDS | 20.0% |
!! | TTAAATACTTCAAGTATTCT+GGG | - | chr1.2:68434891-68434910 | MS.gene60523:CDS | 20.0% |
!!! | TACAGTGATATTTGTTATTA+AGG | - | chr1.2:68435137-68435156 | MS.gene60523:CDS | 20.0% |
!!! | TACTTGAAGTATTTAAGATT+TGG | + | chr1.2:68434887-68434906 | None:intergenic | 20.0% |
!!! | TTTATTGAATTTTGTTTCTG+TGG | + | chr1.2:68434981-68435000 | None:intergenic | 20.0% |
! | AAATCATTCTCATTCCATTT+AGG | + | chr1.2:68434542-68434561 | None:intergenic | 25.0% |
! | ATCAATAAAATTAGTGTACC+TGG | + | chr1.2:68435081-68435100 | None:intergenic | 25.0% |
! | ATTAAGTTATGGAATGAAGA+TGG | - | chr1.2:68435682-68435701 | MS.gene60523:CDS | 25.0% |
! | CATGTATCCTTAACAAAAAA+TGG | - | chr1.2:68434255-68434274 | MS.gene60523:CDS | 25.0% |
! | CTTAAATACTTCAAGTATTC+TGG | - | chr1.2:68434890-68434909 | MS.gene60523:CDS | 25.0% |
! | TAAATACTTCAAGTATTCTG+GGG | - | chr1.2:68434892-68434911 | MS.gene60523:CDS | 25.0% |
! | TAAATGGAATGAGAATGATT+TGG | - | chr1.2:68434541-68434560 | MS.gene60523:intron | 25.0% |
! | TCAAAGATATTGTACAACTT+GGG | - | chr1.2:68434807-68434826 | MS.gene60523:intron | 25.0% |
! | TCCTTAACAAAAAATGGTTA+AGG | - | chr1.2:68434261-68434280 | MS.gene60523:CDS | 25.0% |
! | TTAAGTTATGGAATGAAGAT+GGG | - | chr1.2:68435683-68435702 | MS.gene60523:CDS | 25.0% |
! | TTGATTTCTCTAATCCTAAA+TGG | - | chr1.2:68434525-68434544 | MS.gene60523:intron | 25.0% |
!! | AATTAACAAGTTTTCTCTCA+CGG | - | chr1.2:68434421-68434440 | MS.gene60523:CDS | 25.0% |
!! | TGTTTTCTCGTATATATTAC+AGG | - | chr1.2:68435483-68435502 | MS.gene60523:CDS | 25.0% |
!!! | TCATCGACTTTATCAAAAAT+TGG | - | chr1.2:68434375-68434394 | MS.gene60523:CDS | 25.0% |
!!! | TCCTTAACCATTTTTTGTTA+AGG | + | chr1.2:68434265-68434284 | None:intergenic | 25.0% |
AAGTCCAAATGTTATAGAAG+AGG | - | chr1.2:68434940-68434959 | MS.gene60523:CDS | 30.0% | |
ACAACTTGGGTTAAAAAGAT+TGG | - | chr1.2:68434820-68434839 | MS.gene60523:intron | 30.0% | |
AGTATGATAGAAATGATTGC+GGG | + | chr1.2:68434221-68434240 | None:intergenic | 30.0% | |
ATGCATAAATATGAGCTTTG+TGG | - | chr1.2:68435281-68435300 | MS.gene60523:CDS | 30.0% | |
ATGCTTGCAAAATACTTTGA+AGG | - | chr1.2:68435570-68435589 | MS.gene60523:CDS | 30.0% | |
CTCAAAGATATTGTACAACT+TGG | - | chr1.2:68434806-68434825 | MS.gene60523:intron | 30.0% | |
GAGTATGATAGAAATGATTG+CGG | + | chr1.2:68434222-68434241 | None:intergenic | 30.0% | |
GCACCAAAGTTAAGAAAATT+CGG | + | chr1.2:68434662-68434681 | None:intergenic | 30.0% | |
TAAGTTATGGAATGAAGATG+GGG | - | chr1.2:68435684-68435703 | MS.gene60523:CDS | 30.0% | |
TCTACCTCTTCTATAACATT+TGG | + | chr1.2:68434947-68434966 | None:intergenic | 30.0% | |
TCTTTCGTTATGCACAAAAA+AGG | - | chr1.2:68435178-68435197 | MS.gene60523:CDS | 30.0% | |
TTCAATAAACTTCATGCCAA+TGG | - | chr1.2:68434992-68435011 | MS.gene60523:CDS | 30.0% | |
! | ATGCCGAATTTTCTTAACTT+TGG | - | chr1.2:68434656-68434675 | MS.gene60523:CDS | 30.0% |
! | TTACAGACCTTGAGAAATTT+TGG | - | chr1.2:68435524-68435543 | MS.gene60523:CDS | 30.0% |
!! | ACTTGTTGCTTTCTAATGAA+AGG | - | chr1.2:68435637-68435656 | MS.gene60523:CDS | 30.0% |
!! | CTTGTTGCTTTCTAATGAAA+GGG | - | chr1.2:68435638-68435657 | MS.gene60523:CDS | 30.0% |
!! | GAGAAAACTTGTTAATTCGA+CGG | + | chr1.2:68434418-68434437 | None:intergenic | 30.0% |
!!! | AACGTTTTAAGAGTATTGCT+GGG | + | chr1.2:68434719-68434738 | None:intergenic | 30.0% |
!!! | AATGTGAGTTTTTCAAGCAA+CGG | + | chr1.2:68435332-68435351 | None:intergenic | 30.0% |
ACATGTTTATCAACTCGGAT+CGG | - | chr1.2:68434595-68434614 | MS.gene60523:CDS | 35.0% | |
CAAAGATGCCAAGATTCTAA+CGG | - | chr1.2:68435039-68435058 | MS.gene60523:CDS | 35.0% | |
CAGTATTTGACATAGTCCAT+TGG | + | chr1.2:68435011-68435030 | None:intergenic | 35.0% | |
CCAACACATGTTTATCAACT+CGG | - | chr1.2:68434590-68434609 | MS.gene60523:CDS | 35.0% | |
GTTAAGGATACATGTTGCAA+CGG | + | chr1.2:68434249-68434268 | None:intergenic | 35.0% | |
GTTGCTTGAAAAACTCACAT+TGG | - | chr1.2:68435331-68435350 | MS.gene60523:CDS | 35.0% | |
GTTTAAGTCAATGTTCTCAC+CGG | + | chr1.2:68434297-68434316 | None:intergenic | 35.0% | |
TCTAATGAAAGGGAAAGCTT+TGG | - | chr1.2:68435648-68435667 | MS.gene60523:CDS | 35.0% | |
TGGTTAAGGATACAACAATC+CGG | - | chr1.2:68434275-68434294 | MS.gene60523:CDS | 35.0% | |
TTCTCAAGGTCTGTAAGATA+GGG | + | chr1.2:68435520-68435539 | None:intergenic | 35.0% | |
TTGAGAATTTGAGTCTGAAG+AGG | - | chr1.2:68434759-68434778 | MS.gene60523:intron | 35.0% | |
TTTCTCAAGGTCTGTAAGAT+AGG | + | chr1.2:68435521-68435540 | None:intergenic | 35.0% | |
! | GATAAACATGTGTTGGCAAT+TGG | + | chr1.2:68434586-68434605 | None:intergenic | 35.0% |
! | TTTTTGTACTCACTGTCACT+AGG | + | chr1.2:68435223-68435242 | None:intergenic | 35.0% |
!!! | ATGTGAGTTTTTCAAGCAAC+GGG | + | chr1.2:68435331-68435350 | None:intergenic | 35.0% |
!!! | CAACGTTTTAAGAGTATTGC+TGG | + | chr1.2:68434720-68434739 | None:intergenic | 35.0% |
!!! | CCTTTTTGTCGATTCAACTT+CGG | - | chr1.2:68434322-68434341 | MS.gene60523:CDS | 35.0% |
AGCAACAAGTCCTAAGTTCT+TGG | + | chr1.2:68435627-68435646 | None:intergenic | 40.0% | |
ATTGTTTCCCCACAAGTTTG+AGG | + | chr1.2:68434455-68434474 | None:intergenic | 40.0% | |
CCGAAGTTGAATCGACAAAA+AGG | + | chr1.2:68434325-68434344 | None:intergenic | 40.0% | |
CTTCAATCCAACCCAAAGAA+AGG | + | chr1.2:68434694-68434713 | None:intergenic | 40.0% | |
GCACTCAAAGACCTTTCTTT+GGG | - | chr1.2:68434680-68434699 | MS.gene60523:CDS | 40.0% | |
GCGTTTGCCAAAATTTCTCA+AGG | + | chr1.2:68435534-68435553 | None:intergenic | 40.0% | |
TCAAAGACCTTTCTTTGGGT+TGG | - | chr1.2:68434684-68434703 | MS.gene60523:CDS | 40.0% | |
TGCACTCAAAGACCTTTCTT+TGG | - | chr1.2:68434679-68434698 | MS.gene60523:CDS | 40.0% | |
TTGTTTCCCCACAAGTTTGA+GGG | + | chr1.2:68434454-68434473 | None:intergenic | 40.0% | |
TTTCGAACCCTCAAACTTGT+GGG | - | chr1.2:68434444-68434463 | MS.gene60523:intron | 40.0% | |
! | ATTTGAGTCTGAAGAGGTGT+TGG | - | chr1.2:68434765-68434784 | MS.gene60523:intron | 40.0% |
!! | CCGAGTTGATAAACATGTGT+TGG | + | chr1.2:68434593-68434612 | None:intergenic | 40.0% |
!! | TTTGAGTCTGAAGAGGTGTT+GGG | - | chr1.2:68434766-68434785 | MS.gene60523:intron | 40.0% |
AAAAAGGTTGCTCCATCTGC+AGG | - | chr1.2:68435194-68435213 | MS.gene60523:CDS | 45.0% | |
ATTGCGGGAAGAAGTGATTC+TGG | + | chr1.2:68434206-68434225 | None:intergenic | 45.0% | |
GCTGCAAACCGTTAGAATCT+TGG | + | chr1.2:68435050-68435069 | None:intergenic | 45.0% | |
GTTTCGAACCCTCAAACTTG+TGG | - | chr1.2:68434443-68434462 | MS.gene60523:intron | 45.0% | |
TGCAAATTCTCTGAACGCTC+TGG | + | chr1.2:68435754-68435773 | None:intergenic | 45.0% | |
TTCGAACCCTCAAACTTGTG+GGG | - | chr1.2:68434445-68434464 | MS.gene60523:intron | 45.0% | |
! | AGTCCTAAGTTCTTGGCTTG+TGG | + | chr1.2:68435620-68435639 | None:intergenic | 45.0% |
!! | TCTGAAGAGGTGTTGGGATT+TGG | - | chr1.2:68434772-68434791 | MS.gene60523:intron | 45.0% |
GAGCCACAAGCCAAGAACTT+AGG | - | chr1.2:68435614-68435633 | MS.gene60523:CDS | 50.0% | |
GGTTTGCAGCTATCTACTCC+AGG | - | chr1.2:68435060-68435079 | MS.gene60523:CDS | 50.0% | |
GTAAACGTTGTGCACGTCGA+CGG | + | chr1.2:68435723-68435742 | None:intergenic | 50.0% | |
! | GTTGCTTTCGTGACACAACG+CGG | - | chr1.2:68434485-68434504 | MS.gene60523:intron | 50.0% |
!! | GAAGAGGTGTTGGGATTTGG+TGG | - | chr1.2:68434775-68434794 | MS.gene60523:intron | 50.0% |
GTCACTAGGTCACCTGCAGA+TGG | + | chr1.2:68435209-68435228 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 68434167 | 68435789 | 68434167 | ID=MS.gene60523 |
chr1.2 | mRNA | 68434167 | 68435789 | 68434167 | ID=MS.gene60523.t1;Parent=MS.gene60523 |
chr1.2 | exon | 68434875 | 68435789 | 68434875 | ID=MS.gene60523.t1.exon1;Parent=MS.gene60523.t1 |
chr1.2 | CDS | 68434875 | 68435789 | 68434875 | ID=cds.MS.gene60523.t1;Parent=MS.gene60523.t1 |
chr1.2 | exon | 68434577 | 68434756 | 68434577 | ID=MS.gene60523.t1.exon2;Parent=MS.gene60523.t1 |
chr1.2 | CDS | 68434577 | 68434756 | 68434577 | ID=cds.MS.gene60523.t1;Parent=MS.gene60523.t1 |
chr1.2 | exon | 68434167 | 68434451 | 68434167 | ID=MS.gene60523.t1.exon3;Parent=MS.gene60523.t1 |
chr1.2 | CDS | 68434167 | 68434451 | 68434167 | ID=cds.MS.gene60523.t1;Parent=MS.gene60523.t1 |
Gene Sequence |
Protein sequence |