AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75902

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75902.t1 MTR_2g048140 88.184 457 51 3 1 455 1 456 0.0 814
MS.gene75902.t1 MTR_1g090907 78.947 456 94 2 1 455 1 455 0.0 721
MS.gene75902.t1 MTR_1g090903 58.568 461 135 6 1 455 1 411 4.30e-174 494
MS.gene75902.t1 MTR_3g448340 36.285 463 272 12 5 452 4 458 4.14e-78 250
MS.gene75902.t1 MTR_5g080150 34.483 406 225 8 5 403 3 374 2.49e-64 213
MS.gene75902.t1 MTR_3g049530 29.792 480 238 15 5 453 4 415 1.41e-42 155
MS.gene75902.t1 MTR_1g071060 73.333 90 24 0 40 129 7 96 4.04e-39 137
MS.gene75902.t1 MTR_7g029260 35.714 126 79 2 304 427 34 159 5.81e-15 74.3
MS.gene75902.t1 MTR_8g468470 22.706 436 287 20 30 436 36 450 8.51e-14 73.6
MS.gene75902.t1 MTR_5g040850 23.918 439 267 18 20 438 20 411 1.86e-12 69.3
MS.gene75902.t1 MTR_2g072530 25.620 121 85 2 7 127 13 128 4.26e-12 68.2
MS.gene75902.t1 MTR_0049s0110 28.745 247 132 11 7 251 8 212 8.24e-12 65.9
MS.gene75902.t1 MTR_0049s0110 28.745 247 132 11 7 251 8 212 2.01e-11 65.5
MS.gene75902.t1 MTR_0049s0110 28.745 247 132 11 7 251 8 212 2.62e-11 65.1
MS.gene75902.t1 MTR_0049s0110 28.745 247 132 11 7 251 8 212 2.81e-11 65.5
MS.gene75902.t1 MTR_3g023630 28.708 209 122 7 5 208 6 192 5.33e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75902.t1 AT5G54820 30.621 467 290 14 9 452 9 464 6.64e-58 198
MS.gene75902.t1 AT3G29830 32.906 468 269 19 10 452 11 458 2.40e-57 196
MS.gene75902.t1 AT1G56400 30.876 434 265 12 16 423 22 446 2.38e-56 194
MS.gene75902.t1 AT3G29830 32.265 468 273 18 10 452 11 459 1.10e-55 192
MS.gene75902.t1 AT3G62230 28.105 459 313 12 6 453 7 459 2.01e-49 175
MS.gene75902.t1 AT1G56400 30.811 370 221 11 80 423 45 405 2.52e-44 161
MS.gene75902.t1 AT2G17305 32.927 164 104 4 296 454 106 268 4.62e-20 90.1
MS.gene75902.t1 AT1G61330 27.726 321 203 10 6 319 9 307 1.28e-17 85.5
MS.gene75902.t1 AT3G50710 24.480 433 253 18 6 413 1 384 2.70e-12 68.9
MS.gene75902.t1 AT3G58860 24.793 363 239 14 1 351 1 341 1.96e-11 66.2
MS.gene75902.t1 AT3G28410 23.325 403 252 16 4 391 25 385 4.03e-11 65.5

Find 74 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGTTATCTTCCCATTT+TGG 0.155222 2.4:+42997334 None:intergenic
CTTAAATACTTCAAATATTC+TGG 0.168651 2.4:-42996986 MS.gene75902:CDS
TTGATTTCTCCGATCCAAAA+TGG 0.231442 2.4:-42997348 MS.gene75902:CDS
TTGAAGGTGGTAGAAGTAAT+TGG 0.266648 2.4:-42996197 MS.gene75902:CDS
TTTCTTAAGGTCTACATCAT+AGG 0.276079 2.4:+42996265 None:intergenic
GAATTTGGCCAACTTTGATT+TGG 0.278673 2.4:-42997086 MS.gene75902:CDS
TCATCAACTTTATTACAAAT+TGG 0.280792 2.4:-42997498 MS.gene75902:CDS
TCTTGAGAAGTGTTGGAATT+TGG 0.285867 2.4:-42997101 MS.gene75902:CDS
TGCACTCAAAGACTTATCTT+TGG 0.307976 2.4:-42997194 MS.gene75902:CDS
TTACTTCAGATATAAATGTT+AGG 0.319721 2.4:-42996955 MS.gene75902:CDS
TCCCTAGCCGCGGCATTAAC+AGG 0.323207 2.4:-42997465 MS.gene75902:CDS
CGGAGAAATCATGAAGGATT+TGG 0.330294 2.4:+42996864 None:intergenic
TATTTGAAGTATTTAAGATT+TGG 0.333013 2.4:+42996992 None:intergenic
TCTTATGCAAGGAAAAGTTT+TGG 0.354339 2.4:-42996135 MS.gene75902:CDS
CTTCAATGAAAACTTCTTTG+TGG 0.359992 2.4:-42997563 MS.gene75902:CDS
TGTTGCTTTCGCGACACAAC+GGG 0.362873 2.4:-42997389 MS.gene75902:CDS
GAGTTTGCCAATATTTCTTA+AGG 0.366672 2.4:+42996252 None:intergenic
ATGCATTCATATGAACTTTG+TGG 0.375385 2.4:-42996509 MS.gene75902:CDS
TGTTCTTGTTGTGGCTTCTT+CGG 0.387969 2.4:+42997639 None:intergenic
AATTTGGCCAACTTTGATTT+GGG 0.396324 2.4:-42997085 MS.gene75902:CDS
AGTCATAAGTTCTTCGTTTG+TGG 0.396856 2.4:+42996166 None:intergenic
ATGTAGACCTTAAGAAATAT+TGG 0.398156 2.4:-42996259 MS.gene75902:CDS
GCACCAAAGTTGAGAAAATC+TGG 0.412606 2.4:+42997214 None:intergenic
GCACTCAAAGACTTATCTTT+GGG 0.421361 2.4:-42997193 MS.gene75902:CDS
TACTTCAGATATAAATGTTA+GGG 0.428980 2.4:-42996954 MS.gene75902:CDS
GTTTGAGTCTTGAGAAGTGT+TGG 0.441647 2.4:-42997108 MS.gene75902:CDS
AGTTTGCAGTTATCTACTTC+AGG 0.450619 2.4:-42996825 MS.gene75902:intron
TTCTTAAGGTCTACATCATA+GGG 0.458742 2.4:+42996266 None:intergenic
ACTGCAAACTGTTAGAATCT+TGG 0.462543 2.4:+42996838 None:intergenic
TTGAATCGCTAAAACTGTAT+TGG 0.463419 2.4:-42997252 MS.gene75902:CDS
ACCACTTGGATTAACAAGAT+TGG 0.469749 2.4:-42997056 MS.gene75902:CDS
TTGTTTCCCCACAAGTTTGA+GGG 0.476639 2.4:+42997422 None:intergenic
ACCTGTTAATGCCGCGGCTA+GGG 0.479520 2.4:+42997464 None:intergenic
CCAACGCATGTTTATCAACT+CGG 0.480761 2.4:-42997283 MS.gene75902:CDS
CTTGTTGTGGCTTCTTCGGA+GGG 0.484040 2.4:+42997643 None:intergenic
TTTCGAACCCTCAAACTTGT+GGG 0.484700 2.4:-42997429 MS.gene75902:CDS
CGTTCCATCTCGAGATGAAC+CGG 0.488407 2.4:-42996582 MS.gene75902:CDS
GAAATGATTGCAAGAAGAAG+TGG 0.494008 2.4:+42997673 None:intergenic
TTCCATGTTATCTCTTGCCA+TGG 0.494876 2.4:+42997717 None:intergenic
TGATTTCTCCGATCCAAAAT+GGG 0.501446 2.4:-42997347 MS.gene75902:CDS
ATTAAGTTGTTGAATGAAGA+TGG 0.507951 2.4:-42996101 MS.gene75902:CDS
ACTTGTTGCTTTCTTATGCA+AGG 0.514283 2.4:-42996146 MS.gene75902:CDS
AAGGATAGATGTTCTTGTTG+TGG 0.519897 2.4:+42997630 None:intergenic
CATTAACAGGTTTACTCTCA+CGG 0.529012 2.4:-42997452 MS.gene75902:CDS
TCTTGTTGTGGCTTCTTCGG+AGG 0.529075 2.4:+42997642 None:intergenic
TTGTGGCTTCTTCGGAGGGT+AGG 0.530760 2.4:+42997647 None:intergenic
GTTTCGAACCCTCAAACTTG+TGG 0.531195 2.4:-42997430 MS.gene75902:CDS
GTTGTTGAATGAAGATGGTA+AGG 0.534714 2.4:-42996096 MS.gene75902:CDS
AAACCACTTTGCATCTTCAC+CGG 0.537449 2.4:+42996563 None:intergenic
ATTGTTTCCCCACAAGTTTG+AGG 0.540471 2.4:+42997421 None:intergenic
TTCATCTCCCAAATCAAAGT+TGG 0.548164 2.4:+42997078 None:intergenic
CAAACTTTCAATCGTACGAC+AGG 0.548862 2.4:+42997126 None:intergenic
TCAAAGACTTATCTTTGGGT+CGG 0.555960 2.4:-42997189 MS.gene75902:CDS
GCAAACTGTTAGAATCTTGG+CGG 0.561620 2.4:+42996841 None:intergenic
ACTTGGATTAACAAGATTGG+TGG 0.562210 2.4:-42997053 MS.gene75902:CDS
AACCATGGCAAGAGATAACA+TGG 0.562222 2.4:-42997719 None:intergenic
ACCAATCTTGTTAATCCAAG+TGG 0.566249 2.4:+42997055 None:intergenic
AACCTGTTAATGCCGCGGCT+AGG 0.574094 2.4:+42997463 None:intergenic
AAATGTTAGGGCTATAGAAG+AGG 0.577818 2.4:-42996942 MS.gene75902:CDS
GTGTTGCTTTCGCGACACAA+CGG 0.578346 2.4:-42997390 MS.gene75902:CDS
AACTGTTAGAATCTTGGCGG+CGG 0.578443 2.4:+42996844 None:intergenic
CCGAGTTGATAAACATGCGT+TGG 0.591872 2.4:+42997283 None:intergenic
CTAAAAGTTGTGCACATGCA+CGG 0.600802 2.4:+42996063 None:intergenic
GATTTGGGAGATGAACCACT+TGG 0.617804 2.4:-42997070 MS.gene75902:CDS
TTCGAACCCTCAAACTTGTG+GGG 0.628166 2.4:-42997428 MS.gene75902:CDS
ATCACGCACTTCCCTAGCCG+CGG 0.637753 2.4:-42997475 MS.gene75902:CDS
TTCACCGGTTCATCTCGAGA+TGG 0.654401 2.4:+42996578 None:intergenic
GTTGAATGAAGATGGTAAGG+TGG 0.657143 2.4:-42996093 MS.gene75902:CDS
TCGCTAAAACTGTATTGGTG+TGG 0.670269 2.4:-42997247 MS.gene75902:CDS
GAGTAAACCTGTTAATGCCG+CGG 0.670516 2.4:+42997458 None:intergenic
GAACCGGTGAAGATGCAAAG+TGG 0.683056 2.4:-42996566 MS.gene75902:CDS
TGGCGGCGGAGAAATCATGA+AGG 0.685071 2.4:+42996858 None:intergenic
GAATCAGAATTCGATGAACG+TGG 0.701292 2.4:-42996899 MS.gene75902:CDS
GTTGCTTTCGCGACACAACG+GGG 0.718979 2.4:-42997388 MS.gene75902:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTGAAGTATTTAAGATT+TGG + chr2.4:42996742-42996761 None:intergenic 15.0%
!! CTTAAATACTTCAAATATTC+TGG - chr2.4:42996745-42996764 MS.gene75902:intron 20.0%
!! TACTTCAGATATAAATGTTA+GGG - chr2.4:42996777-42996796 MS.gene75902:intron 20.0%
!! TAGTCATTGATATAGTTATA+TGG - chr2.4:42997402-42997421 MS.gene75902:CDS 20.0%
!! TATATCGACATACATATATT+AGG - chr2.4:42997125-42997144 MS.gene75902:CDS 20.0%
!! TATTTGCTTGTATATATTAC+AGG - chr2.4:42997431-42997450 MS.gene75902:CDS 20.0%
!! TCATCAACTTTATTACAAAT+TGG - chr2.4:42996233-42996252 MS.gene75902:CDS 20.0%
!! TTACTTCAGATATAAATGTT+AGG - chr2.4:42996776-42996795 MS.gene75902:intron 20.0%
! AATGTCGGAAGTAAATTAAT+AGG + chr2.4:42996963-42996982 None:intergenic 25.0%
! ATGCTTGAAAAATACATTGA+AGG - chr2.4:42997518-42997537 MS.gene75902:CDS 25.0%
! ATGTAGACCTTAAGAAATAT+TGG - chr2.4:42997472-42997491 MS.gene75902:CDS 25.0%
!! ATTAAGTTGTTGAATGAAGA+TGG - chr2.4:42997630-42997649 MS.gene75902:CDS 25.0%
!! TTCCGACATTGATTAAATAT+GGG - chr2.4:42996973-42996992 MS.gene75902:CDS 25.0%
!!! AATGTATTTTTCAAGCATTG+AGG + chr2.4:42997516-42997535 None:intergenic 25.0%
!!! CCATATCTTTAACCATTTTT+CGG + chr2.4:42996128-42996147 None:intergenic 25.0%
AAGTCCACAAGTTATATTTG+AGG - chr2.4:42997334-42997353 MS.gene75902:CDS 30.0%
ATGCATTCATATGAACTTTG+TGG - chr2.4:42997222-42997241 MS.gene75902:CDS 30.0%
CCGAAAAATGGTTAAAGATA+TGG - chr2.4:42996125-42996144 MS.gene75902:CDS 30.0%
CTTCAATGAAAACTTCTTTG+TGG - chr2.4:42996168-42996187 MS.gene75902:CDS 30.0%
CTTGAAAAATACATTGAAGG+TGG - chr2.4:42997521-42997540 MS.gene75902:CDS 30.0%
GAGTTTGCCAATATTTCTTA+AGG + chr2.4:42997482-42997501 None:intergenic 30.0%
TTCTTAAGGTCTACATCATA+GGG + chr2.4:42997468-42997487 None:intergenic 30.0%
TTGAATCGCTAAAACTGTAT+TGG - chr2.4:42996479-42996498 MS.gene75902:CDS 30.0%
TTTCTTAAGGTCTACATCAT+AGG + chr2.4:42997469-42997488 None:intergenic 30.0%
! AAATCGTTATCTTCCCATTT+TGG + chr2.4:42996400-42996419 None:intergenic 30.0%
! AATTTGGCCAACTTTGATTT+GGG - chr2.4:42996646-42996665 MS.gene75902:intron 30.0%
! ACTTTTAGTCAAAGCTCAAA+AGG - chr2.4:42997683-42997702 MS.gene75902:CDS 30.0%
! ATTGAAGTCGATGTTTTCTT+CGG + chr2.4:42996155-42996174 None:intergenic 30.0%
! CTTCCGACATTGATTAAATA+TGG - chr2.4:42996972-42996991 MS.gene75902:CDS 30.0%
! CTTTTAGTCAAAGCTCAAAA+GGG - chr2.4:42997684-42997703 MS.gene75902:CDS 30.0%
! TCCGACATTGATTAAATATG+GGG - chr2.4:42996974-42996993 MS.gene75902:CDS 30.0%
! TCTTATGCAAGGAAAAGTTT+TGG - chr2.4:42997596-42997615 MS.gene75902:CDS 30.0%
! TTAGTTGGCATGAATTTTGT+GGG - chr2.4:42997006-42997025 MS.gene75902:CDS 30.0%
! TTTAGTTGGCATGAATTTTG+TGG - chr2.4:42997005-42997024 MS.gene75902:CDS 30.0%
!! TCTTTAACCATTTTTCGGTA+AGG + chr2.4:42996123-42996142 None:intergenic 30.0%
!!! TTGTGAGTTTTTCAAGCAAT+GGG + chr2.4:42997272-42997291 None:intergenic 30.0%
AAATGTTAGGGCTATAGAAG+AGG - chr2.4:42996789-42996808 MS.gene75902:intron 35.0%
AAGGATAGATGTTCTTGTTG+TGG + chr2.4:42996104-42996123 None:intergenic 35.0%
ACCAATCTTGTTAATCCAAG+TGG + chr2.4:42996679-42996698 None:intergenic 35.0%
ACCACTTGGATTAACAAGAT+TGG - chr2.4:42996675-42996694 MS.gene75902:intron 35.0%
ACTGCAAACTGTTAGAATCT+TGG + chr2.4:42996896-42996915 None:intergenic 35.0%
ACTTGGATTAACAAGATTGG+TGG - chr2.4:42996678-42996697 MS.gene75902:intron 35.0%
AGTCATAAGTTCTTCGTTTG+TGG + chr2.4:42997568-42997587 None:intergenic 35.0%
AGTTTGCAGTTATCTACTTC+AGG - chr2.4:42996906-42996925 MS.gene75902:CDS 35.0%
CATCTATCCTTACCGAAAAA+TGG - chr2.4:42996113-42996132 MS.gene75902:CDS 35.0%
CATTAACAGGTTTACTCTCA+CGG - chr2.4:42996279-42996298 MS.gene75902:CDS 35.0%
CTGACCTCAAATATAACTTG+TGG + chr2.4:42997341-42997360 None:intergenic 35.0%
GAAATGATTGCAAGAAGAAG+TGG + chr2.4:42996061-42996080 None:intergenic 35.0%
GAATTTGGCCAACTTTGATT+TGG - chr2.4:42996645-42996664 MS.gene75902:intron 35.0%
GCACTCAAAGACTTATCTTT+GGG - chr2.4:42996538-42996557 MS.gene75902:CDS 35.0%
GCCCCATATTTAATCAATGT+CGG + chr2.4:42996978-42996997 None:intergenic 35.0%
GTTGTTGAATGAAGATGGTA+AGG - chr2.4:42997635-42997654 MS.gene75902:CDS 35.0%
TCAAAGACTTATCTTTGGGT+CGG - chr2.4:42996542-42996561 MS.gene75902:CDS 35.0%
TGATTTCTCCGATCCAAAAT+GGG - chr2.4:42996384-42996403 MS.gene75902:intron 35.0%
TGCACTCAAAGACTTATCTT+TGG - chr2.4:42996537-42996556 MS.gene75902:CDS 35.0%
TGTGACTGTAGCAAAATTGT+TGG - chr2.4:42997077-42997096 MS.gene75902:CDS 35.0%
TTCATCTCCCAAATCAAAGT+TGG + chr2.4:42996656-42996675 None:intergenic 35.0%
TTGAAGGTGGTAGAAGTAAT+TGG - chr2.4:42997534-42997553 MS.gene75902:CDS 35.0%
TTGATTTCTCCGATCCAAAA+TGG - chr2.4:42996383-42996402 MS.gene75902:intron 35.0%
! ATGGGGCTAGTATATTTAGT+TGG - chr2.4:42996991-42997010 MS.gene75902:CDS 35.0%
! GTTATCTTCCCATTTTGGAT+CGG + chr2.4:42996395-42996414 None:intergenic 35.0%
! TGGGAAGATAACGATTTTGA+TGG - chr2.4:42996403-42996422 MS.gene75902:intron 35.0%
!! ACTTGTTGCTTTCTTATGCA+AGG - chr2.4:42997585-42997604 MS.gene75902:CDS 35.0%
!! TCTTGAGAAGTGTTGGAATT+TGG - chr2.4:42996630-42996649 MS.gene75902:intron 35.0%
!!! CTTGTGAGTTTTTCAAGCAA+TGG + chr2.4:42997273-42997292 None:intergenic 35.0%
AAACCACTTTGCATCTTCAC+CGG + chr2.4:42997171-42997190 None:intergenic 40.0%
ACTTGTGGACTTATGTCCAA+TGG + chr2.4:42997326-42997345 None:intergenic 40.0%
ATTGTTTCCCCACAAGTTTG+AGG + chr2.4:42996313-42996332 None:intergenic 40.0%
CAAACTTTCAATCGTACGAC+AGG + chr2.4:42996608-42996627 None:intergenic 40.0%
CCAACGCATGTTTATCAACT+CGG - chr2.4:42996448-42996467 MS.gene75902:CDS 40.0%
CGGAGAAATCATGAAGGATT+TGG + chr2.4:42996870-42996889 None:intergenic 40.0%
CTAAAAGTTGTGCACATGCA+CGG + chr2.4:42997671-42997690 None:intergenic 40.0%
CTTGTGGACTTATGTCCAAT+GGG + chr2.4:42997325-42997344 None:intergenic 40.0%
GAATCAGAATTCGATGAACG+TGG - chr2.4:42996832-42996851 MS.gene75902:CDS 40.0%
GCAAACTGTTAGAATCTTGG+CGG + chr2.4:42996893-42996912 None:intergenic 40.0%
GCACCAAAGTTGAGAAAATC+TGG + chr2.4:42996520-42996539 None:intergenic 40.0%
GTTGAATGAAGATGGTAAGG+TGG - chr2.4:42997638-42997657 MS.gene75902:CDS 40.0%
TTGTTTCCCCACAAGTTTGA+GGG + chr2.4:42996312-42996331 None:intergenic 40.0%
TTTCGAACCCTCAAACTTGT+GGG - chr2.4:42996302-42996321 MS.gene75902:intron 40.0%
! ACGCCAGATTTTCTCAACTT+TGG - chr2.4:42996514-42996533 MS.gene75902:CDS 40.0%
! GTTTGAGTCTTGAGAAGTGT+TGG - chr2.4:42996623-42996642 MS.gene75902:intron 40.0%
! TCGCTAAAACTGTATTGGTG+TGG - chr2.4:42996484-42996503 MS.gene75902:CDS 40.0%
! TGTTCTTGTTGTGGCTTCTT+CGG + chr2.4:42996095-42996114 None:intergenic 40.0%
AACTGTTAGAATCTTGGCGG+CGG + chr2.4:42996890-42996909 None:intergenic 45.0%
GAGTAAACCTGTTAATGCCG+CGG + chr2.4:42996276-42996295 None:intergenic 45.0%
GATTTGGGAGATGAACCACT+TGG - chr2.4:42996661-42996680 MS.gene75902:intron 45.0%
GTTTCGAACCCTCAAACTTG+TGG - chr2.4:42996301-42996320 MS.gene75902:intron 45.0%
TTCGAACCCTCAAACTTGTG+GGG - chr2.4:42996303-42996322 MS.gene75902:intron 45.0%
!! CCGAGTTGATAAACATGCGT+TGG + chr2.4:42996451-42996470 None:intergenic 45.0%
CGTTCCATCTCGAGATGAAC+CGG - chr2.4:42997149-42997168 MS.gene75902:CDS 50.0%
GAACCGGTGAAGATGCAAAG+TGG - chr2.4:42997165-42997184 MS.gene75902:CDS 50.0%
GTCTCACAACAGTTGCCCAT+TGG - chr2.4:42997307-42997326 MS.gene75902:CDS 50.0%
! CTTGTTGTGGCTTCTTCGGA+GGG + chr2.4:42996091-42996110 None:intergenic 50.0%
! TCTTGTTGTGGCTTCTTCGG+AGG + chr2.4:42996092-42996111 None:intergenic 50.0%
!! GTGTTGCTTTCGCGACACAA+CGG - chr2.4:42996341-42996360 MS.gene75902:intron 50.0%
!! TGTTGCTTTCGCGACACAAC+GGG - chr2.4:42996342-42996361 MS.gene75902:intron 50.0%
!! TTCACCGGTTCATCTCGAGA+TGG + chr2.4:42997156-42997175 None:intergenic 50.0%
AACCTGTTAATGCCGCGGCT+AGG + chr2.4:42996271-42996290 None:intergenic 55.0%
ACCTGTTAATGCCGCGGCTA+GGG + chr2.4:42996270-42996289 None:intergenic 55.0%
TGGCGGCGGAGAAATCATGA+AGG + chr2.4:42996876-42996895 None:intergenic 55.0%
TTGTGGCTTCTTCGGAGGGT+AGG + chr2.4:42996087-42996106 None:intergenic 55.0%
! GTTGCTTTCGCGACACAACG+GGG - chr2.4:42996343-42996362 MS.gene75902:intron 55.0%
ATCACGCACTTCCCTAGCCG+CGG - chr2.4:42996256-42996275 MS.gene75902:CDS 60.0%
TCCCTAGCCGCGGCATTAAC+AGG - chr2.4:42996266-42996285 MS.gene75902:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 42996016 42997737 42996016 ID=MS.gene75902
chr2.4 mRNA 42996016 42997737 42996016 ID=MS.gene75902.t1;Parent=MS.gene75902
chr2.4 exon 42996826 42997737 42996826 ID=MS.gene75902.t1.exon1;Parent=MS.gene75902.t1
chr2.4 CDS 42996826 42997737 42996826 ID=cds.MS.gene75902.t1;Parent=MS.gene75902.t1
chr2.4 exon 42996436 42996606 42996436 ID=MS.gene75902.t1.exon2;Parent=MS.gene75902.t1
chr2.4 CDS 42996436 42996606 42996436 ID=cds.MS.gene75902.t1;Parent=MS.gene75902.t1
chr2.4 exon 42996016 42996300 42996016 ID=MS.gene75902.t1.exon3;Parent=MS.gene75902.t1
chr2.4 CDS 42996016 42996300 42996016 ID=cds.MS.gene75902.t1;Parent=MS.gene75902.t1
Gene Sequence

>MS.gene75902

ATGGCAAGAGATAACATGGAATTGTTTTCTTCGATACTAAAACCACTTCTTCTTGCAATCATTTCTTTCCTACCCTCCGAAGAAGCCACAACAAGAACATCTATCCTTACCGAAAAATGGTTAAAGATATGGCAGTCCGAAGAAAACATCGACTTCAATGAAAACTTCTTTGTGGATTCAACTTCTGATGAAAACAAACAAGAACAAAGAAAAGTTTTCATCAACTTTATTACAAATTGGATCACGCACTTCCCTAGCCGCGGCATTAACAGGTTTACTCTCACGGTTTCGAACCCTCAAACTTGTGGGGAAACAATTGAACAGTGTGTTGCTTTCGCGACACAACGGGGTGTGAAAGAGTTAATTCTTGATTTCTCCGATCCAAAATGGGAAGATAACGATTTTGATGGTAAACATGCGTTGTTTCAATTGCCAACGCATGTTTATCAACTCGGATTGTCGCTTGAATCGCTAAAACTGTATTGGTGTGGTTTCAATACGCCAGATTTTCTCAACTTTGGTGCACTCAAAGACTTATCTTTGGGTCGGATTGAAGTTAAAATCGAAACTCTAAAAAGATTGTTATCAACCTGTCGTACGATTGAAAGTTTGAGTCTTGAGAAGTGTTGGAATTTGGCCAACTTTGATTTGGGAGATGAACCACTTGGATTAACAAGATTGGTGGTAAACAAGTGTGATTCTGAGTATTTCATATTTAATGCACCAAATCTTAAATACTTCAAATATTCTGGAGTTGTGTTTACTTCAGATATAAATGTTAGGGCTATAGAAGAGGTAGACATTGAATTTTCTCTAGAATCAGAATTCGATGAACGTGGTAATGAACTCTGCCAAATCCTTCATGATTTCTCCGCCGCCAAGATTCTAACAGTTTGCAGTTATCTACTTCAGGTACTCTTTTAATTAATTTCTCGTTATTTGCACCTATTAATTTACTTCCGACATTGATTAAATATGGGGCTAGTATATTTAGTTGGCATGAATTTTGTGGGAGTATATATAAATTGATTTTACACTAAAATTCAATTTGAAGTTGTGATTGTGACTGTAGCAAAATTGTTGGTTTAATTTAATTTGCATTGATATCTTATATCGACATACATATATTAGGTCGTTCCATCTCGAGATGAACCGGTGAAGATGCAAAGTGGTTTGAATGTAAAACATTTGACTCTAAAGACTCAAATGCATTCATATGAACTTTGTGGATTTGAATTCATGCTCAACAGTTGCCCATTGCTTGAAAAACTCACAAGACTATACACTTCATGTCTCACAACAGTTGCCCATTGGACATAAGTCCACAAGTTATATTTGAGGTCAGTCAAATACTTTACATTTCATGTCTCTCAATTTTTAACATAGTAGTCATTGATATAGTTATATGGTTTGAATATTTGCTTGTATATATTACAGGACTATACACTTCCCTATGATGTAGACCTTAAGAAATATTGGCAAACTCATCGAGTGTTTCCTCAATGCTTGAAAAATACATTGAAGGTGGTAGAAGTAATTGGATTGAGAGCCACAAACGAAGAACTTATGACTTGTTGCTTTCTTATGCAAGGAAAAGTTTTGGAACAGATTGATATTAAGTTGTTGAATGAAGATGGTAAGGTGGAATTTCGCCGTGCATGTGCACAACTTTTAGTCAAAGCTCAAAAGGGTTCAAAGAATTTGCAAATATCAATTGATTGA
Protein sequence

>MS.gene75902.t1

MARDNMELFSSILKPLLLAIISFLPSEEATTRTSILTEKWLKIWQSEENIDFNENFFVDSTSDENKQEQRKVFINFITNWITHFPSRGINRFTLTVSNPQTCGETIEQCVAFATQRGVKELILDFSDPKWEDNDFDGKHALFQLPTHVYQLGLSLESLKLYWCGFNTPDFLNFGALKDLSLGRIEVKIETLKRLLSTCRTIESLSLEKCWNLANFDLGDEPLGLTRLVVNKCDSEYFIFNAPNLKYFKYSGVVFTSDINVRAIEEVDIEFSLESEFDERGNELCQILHDFSAAKILTVCSYLLQVVPSRDEPVKMQSGLNVKHLTLKTQMHSYELCGFEFMLNSCPLLEKLTRLYTSCLTTDYTLPYDVDLKKYWQTHRVFPQCLKNTLKVVEVIGLRATNEELMTCCFLMQGKVLEQIDIKLLNEDGKVEFRRACAQLLVKAQKGSKNLQISID