Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20329.t1 | KEH43362.1 | 80.6 | 459 | 41 | 1 | 1 | 459 | 1 | 411 | 1.70E-205 | 725.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20329.t1 | Q9FFU7 | 30.0 | 447 | 274 | 13 | 7 | 429 | 7 | 438 | 1.1e-46 | 189.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20329.t1 | A0A072VNK9 | 80.6 | 459 | 41 | 1 | 1 | 459 | 1 | 411 | 1.3e-205 | 725.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20329.t1 | MTR_1g090903 | 80.174 | 459 | 43 | 1 | 1 | 459 | 1 | 411 | 0.0 | 699 |
MS.gene20329.t1 | MTR_1g090907 | 68.831 | 462 | 134 | 6 | 1 | 459 | 1 | 455 | 0.0 | 618 |
MS.gene20329.t1 | MTR_2g048140 | 67.749 | 462 | 140 | 6 | 1 | 459 | 1 | 456 | 0.0 | 613 |
MS.gene20329.t1 | MTR_3g448340 | 35.637 | 463 | 274 | 12 | 4 | 453 | 3 | 454 | 1.01e-77 | 249 |
MS.gene20329.t1 | MTR_5g080150 | 33.584 | 399 | 220 | 8 | 7 | 398 | 5 | 365 | 1.61e-61 | 205 |
MS.gene20329.t1 | MTR_3g049530 | 29.752 | 484 | 241 | 14 | 4 | 458 | 3 | 416 | 3.36e-44 | 160 |
MS.gene20329.t1 | MTR_1g071060 | 81.111 | 90 | 17 | 0 | 37 | 126 | 7 | 96 | 2.36e-43 | 148 |
MS.gene20329.t1 | MTR_7g029260 | 38.739 | 111 | 67 | 1 | 322 | 431 | 49 | 159 | 1.03e-15 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20329.t1 | AT5G54820 | 29.978 | 447 | 274 | 13 | 7 | 429 | 7 | 438 | 3.23e-53 | 186 |
MS.gene20329.t1 | AT1G56400 | 30.189 | 424 | 272 | 11 | 7 | 417 | 13 | 425 | 6.82e-53 | 185 |
MS.gene20329.t1 | AT3G62230 | 28.416 | 461 | 311 | 13 | 7 | 457 | 8 | 459 | 8.22e-51 | 179 |
MS.gene20329.t1 | AT3G29830 | 31.435 | 439 | 268 | 17 | 7 | 427 | 8 | 431 | 5.72e-47 | 169 |
MS.gene20329.t1 | AT3G29830 | 30.524 | 439 | 273 | 16 | 7 | 427 | 8 | 432 | 5.42e-45 | 163 |
MS.gene20329.t1 | AT1G56400 | 30.508 | 354 | 223 | 10 | 75 | 417 | 43 | 384 | 2.29e-42 | 155 |
MS.gene20329.t1 | AT2G17305 | 34.932 | 146 | 85 | 5 | 297 | 439 | 106 | 244 | 8.69e-17 | 80.9 |
MS.gene20329.t1 | AT3G28410 | 24.054 | 370 | 233 | 14 | 4 | 360 | 25 | 359 | 4.18e-12 | 68.6 |
Find 65 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAAATACTTCAAGTATTC+TGG | 0.119443 | 1.3:-63924757 | MS.gene20329:CDS |
TTACAGACCTTGAGAAATTT+TGG | 0.162868 | 1.3:-63924123 | MS.gene20329:CDS |
AAGTCAACAAGTTATATTTA+AGG | 0.205513 | 1.3:-63924289 | MS.gene20329:intron |
AAATCATTCTCATTCCATTT+AGG | 0.218782 | 1.3:+63925108 | None:intergenic |
TTGATTTCTCTAATCCTAAA+TGG | 0.228700 | 1.3:-63925122 | MS.gene20329:CDS |
TGCACTCAAAGACCTTTCTT+TGG | 0.273300 | 1.3:-63924968 | MS.gene20329:CDS |
AGCAACAAGTCCTAAGTTCT+TGG | 0.287063 | 1.3:+63924023 | None:intergenic |
TTTCTCAAGGTCTGTAAGAT+AGG | 0.287636 | 1.3:+63924129 | None:intergenic |
CCGAAGTTGAATCGACAAAA+AGG | 0.297834 | 1.3:+63925325 | None:intergenic |
TACTTGAAGTATTTAAGATT+TGG | 0.310198 | 1.3:+63924763 | None:intergenic |
GCACTCAAAGACCTTTCTTT+GGG | 0.333998 | 1.3:-63924967 | MS.gene20329:CDS |
TCTGAAGAGGTGTTGGGATT+TGG | 0.338041 | 1.3:-63924875 | MS.gene20329:CDS |
TCTACCTCTTCTATAACATT+TGG | 0.363653 | 1.3:+63924703 | None:intergenic |
CTCAAAGATATTGTACAACT+TGG | 0.380226 | 1.3:-63924841 | MS.gene20329:CDS |
TTAAATACTTCAAGTATTCT+GGG | 0.388380 | 1.3:-63924756 | MS.gene20329:CDS |
GATAAACATGTGTTGGCAAT+TGG | 0.395256 | 1.3:+63925064 | None:intergenic |
TCTAATGAAAGGGAAAGCTT+TGG | 0.395771 | 1.3:-63923999 | MS.gene20329:CDS |
GCACCAAAGTTAAGAAAATT+CGG | 0.399622 | 1.3:+63924988 | None:intergenic |
ATGCATAAATATGAGCTTTG+TGG | 0.400472 | 1.3:-63924366 | MS.gene20329:CDS |
AACAGATTAATATTAAGTTA+TGG | 0.414219 | 1.3:-63923976 | MS.gene20329:CDS |
TGCAAATTCTCTGAACGCTC+TGG | 0.416716 | 1.3:+63923896 | None:intergenic |
ATTTGAGTCTGAAGAGGTGT+TGG | 0.416726 | 1.3:-63924882 | MS.gene20329:CDS |
ATTGCGGGAAGAAGTGATTC+TGG | 0.429320 | 1.3:+63925444 | None:intergenic |
CTTGTTGCTTTCTAATGAAA+GGG | 0.435494 | 1.3:-63924009 | MS.gene20329:CDS |
TTTGAGTCTGAAGAGGTGTT+GGG | 0.435529 | 1.3:-63924881 | MS.gene20329:CDS |
TCAAAGACCTTTCTTTGGGT+TGG | 0.435585 | 1.3:-63924963 | MS.gene20329:CDS |
ATTAAGTTATGGAATGAAGA+TGG | 0.439836 | 1.3:-63923965 | MS.gene20329:CDS |
AATGCTTGCAAAATACTTTG+AGG | 0.447199 | 1.3:-63924078 | MS.gene20329:CDS |
GAAGAGGTGTTGGGATTTGG+TGG | 0.462276 | 1.3:-63924872 | MS.gene20329:CDS |
TTAAGTTATGGAATGAAGAT+GGG | 0.463289 | 1.3:-63923964 | MS.gene20329:CDS |
TTGTTTCCCCACAAGTTTGA+GGG | 0.465128 | 1.3:+63925196 | None:intergenic |
TAAATGGAATGAGAATGATT+TGG | 0.468215 | 1.3:-63925106 | MS.gene20329:CDS |
ATGCTTGCAAAATACTTTGA+GGG | 0.470267 | 1.3:-63924077 | MS.gene20329:CDS |
ACTTGTTGCTTTCTAATGAA+AGG | 0.474911 | 1.3:-63924010 | MS.gene20329:CDS |
CCAACACATGTTTATCAACT+CGG | 0.480856 | 1.3:-63925057 | MS.gene20329:CDS |
TTCAATAAACTTCATGCCAA+TGG | 0.482452 | 1.3:-63924655 | MS.gene20329:CDS |
AGTATGATAGAAATGATTGC+GGG | 0.485402 | 1.3:+63925429 | None:intergenic |
GAGCCACAAGCCAAGAACTT+AGG | 0.485470 | 1.3:-63924033 | MS.gene20329:CDS |
TTTCGAACCCTCAAACTTGT+GGG | 0.496909 | 1.3:-63925203 | MS.gene20329:CDS |
ATTGTTTCCCCACAAGTTTG+AGG | 0.516839 | 1.3:+63925195 | None:intergenic |
TTCTCAAGGTCTGTAAGATA+GGG | 0.517184 | 1.3:+63924130 | None:intergenic |
CTTCAATCCAACCCAAAGAA+AGG | 0.520129 | 1.3:+63924956 | None:intergenic |
GTTTCGAACCCTCAAACTTG+TGG | 0.529919 | 1.3:-63925204 | MS.gene20329:CDS |
CAAAGATGCTAAGATTCTAA+CGG | 0.537673 | 1.3:-63924608 | MS.gene20329:CDS |
GTTTAAGTCAATGTTCTCAC+CGG | 0.538007 | 1.3:+63925353 | None:intergenic |
ACATGTTTATCAACTCGGAT+TGG | 0.548056 | 1.3:-63925052 | MS.gene20329:CDS |
AGTCCTAAGTTCTTGGCTTG+TGG | 0.551466 | 1.3:+63924030 | None:intergenic |
TCACTAAAATTGTATTCATG+TGG | 0.554082 | 1.3:-63925021 | MS.gene20329:CDS |
TCAAAGATATTGTACAACTT+GGG | 0.557071 | 1.3:-63924840 | MS.gene20329:CDS |
GTCACTAGGTCACCTGCAGA+TGG | 0.558055 | 1.3:+63924441 | None:intergenic |
CAGTATTTGACATAGTCCAT+TGG | 0.560520 | 1.3:+63924639 | None:intergenic |
CCGAGTTGATAAACATGTGT+TGG | 0.566603 | 1.3:+63925057 | None:intergenic |
TTGAGAATTTGAGTCTGAAG+AGG | 0.567770 | 1.3:-63924888 | MS.gene20329:CDS |
GCGTTTGCCAAAATTTCTCA+AGG | 0.569849 | 1.3:+63924116 | None:intergenic |
GTTAAGGATACATGTTGCAA+CGG | 0.571660 | 1.3:+63925401 | None:intergenic |
GAGAAAACTTGTTAATTCGA+CGG | 0.572982 | 1.3:+63925232 | None:intergenic |
TGGTTAAGGATACAACAATC+CGG | 0.589501 | 1.3:-63925372 | MS.gene20329:CDS |
AAGTCCAAATGTTATAGAAG+AGG | 0.593335 | 1.3:-63924707 | MS.gene20329:CDS |
TAAATACTTCAAGTATTCTG+GGG | 0.613240 | 1.3:-63924755 | MS.gene20329:CDS |
GGTTTGCAGCTATCTACTCC+AGG | 0.619785 | 1.3:-63924587 | MS.gene20329:intron |
GTAAACGTTGTGCACGTCGA+CGG | 0.623132 | 1.3:+63923927 | None:intergenic |
TTCGAACCCTCAAACTTGTG+GGG | 0.625727 | 1.3:-63925202 | MS.gene20329:CDS |
TAAGTTATGGAATGAAGATG+GGG | 0.628981 | 1.3:-63923963 | MS.gene20329:CDS |
GAGTATGATAGAAATGATTG+CGG | 0.639552 | 1.3:+63925428 | None:intergenic |
GTTGCTTTCGTGACACAACG+CGG | 0.780634 | 1.3:-63925162 | MS.gene20329:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAGATTAATATTAAGTTA+TGG | - | chr1.3:63925384-63925403 | MS.gene20329:CDS | 15.0% |
!! | AAGTCAACAAGTTATATTTA+AGG | - | chr1.3:63925071-63925090 | MS.gene20329:CDS | 20.0% |
!! | TTAAATACTTCAAGTATTCT+GGG | - | chr1.3:63924604-63924623 | MS.gene20329:CDS | 20.0% |
!!! | TACAGTGATATTTGTTATTA+AGG | - | chr1.3:63924850-63924869 | MS.gene20329:CDS | 20.0% |
!!! | TACTTGAAGTATTTAAGATT+TGG | + | chr1.3:63924600-63924619 | None:intergenic | 20.0% |
!!! | TTTATTGAATTTTGTTTCTG+TGG | + | chr1.3:63924694-63924713 | None:intergenic | 20.0% |
! | AAATCATTCTCATTCCATTT+AGG | + | chr1.3:63924255-63924274 | None:intergenic | 25.0% |
! | ATCAATAAAATTAGTGTACC+TGG | + | chr1.3:63924794-63924813 | None:intergenic | 25.0% |
! | ATTAAGTTATGGAATGAAGA+TGG | - | chr1.3:63925395-63925414 | MS.gene20329:CDS | 25.0% |
! | CATGTATCCTTAACAAAAAA+TGG | - | chr1.3:63923968-63923987 | MS.gene20329:CDS | 25.0% |
! | CTTAAATACTTCAAGTATTC+TGG | - | chr1.3:63924603-63924622 | MS.gene20329:CDS | 25.0% |
! | TAAATACTTCAAGTATTCTG+GGG | - | chr1.3:63924605-63924624 | MS.gene20329:CDS | 25.0% |
! | TAAATGGAATGAGAATGATT+TGG | - | chr1.3:63924254-63924273 | MS.gene20329:intron | 25.0% |
! | TCAAAGATATTGTACAACTT+GGG | - | chr1.3:63924520-63924539 | MS.gene20329:intron | 25.0% |
! | TCACTAAAATTGTATTCATG+TGG | - | chr1.3:63924339-63924358 | MS.gene20329:CDS | 25.0% |
! | TCCTTAACAAAAAATGGTTA+AGG | - | chr1.3:63923974-63923993 | MS.gene20329:CDS | 25.0% |
! | TTAAGTTATGGAATGAAGAT+GGG | - | chr1.3:63925396-63925415 | MS.gene20329:CDS | 25.0% |
! | TTGATTTCTCTAATCCTAAA+TGG | - | chr1.3:63924238-63924257 | MS.gene20329:intron | 25.0% |
!! | AATTAACAAGTTTTCTCTCA+TGG | - | chr1.3:63924134-63924153 | MS.gene20329:CDS | 25.0% |
!! | TGTTTTCTCGTATATATTAC+AGG | - | chr1.3:63925196-63925215 | MS.gene20329:CDS | 25.0% |
!!! | TCATCGACTTTATCAAAAAT+TGG | - | chr1.3:63924088-63924107 | MS.gene20329:CDS | 25.0% |
!!! | TCCTTAACCATTTTTTGTTA+AGG | + | chr1.3:63923978-63923997 | None:intergenic | 25.0% |
!!! | TCTTTTGTTATGCACAAAAA+AGG | - | chr1.3:63924891-63924910 | MS.gene20329:CDS | 25.0% |
AAGTCCAAATGTTATAGAAG+AGG | - | chr1.3:63924653-63924672 | MS.gene20329:CDS | 30.0% | |
AATGCTTGCAAAATACTTTG+AGG | - | chr1.3:63925282-63925301 | MS.gene20329:CDS | 30.0% | |
ACAACTTGGGTTAAAAAGAT+TGG | - | chr1.3:63924533-63924552 | MS.gene20329:intron | 30.0% | |
AGTATGATAGAAATGATTGC+GGG | + | chr1.3:63923934-63923953 | None:intergenic | 30.0% | |
ATGCATAAATATGAGCTTTG+TGG | - | chr1.3:63924994-63925013 | MS.gene20329:CDS | 30.0% | |
ATGCTTGCAAAATACTTTGA+GGG | - | chr1.3:63925283-63925302 | MS.gene20329:CDS | 30.0% | |
CAAAGATGCTAAGATTCTAA+CGG | - | chr1.3:63924752-63924771 | MS.gene20329:CDS | 30.0% | |
CTCAAAGATATTGTACAACT+TGG | - | chr1.3:63924519-63924538 | MS.gene20329:intron | 30.0% | |
GAGTATGATAGAAATGATTG+CGG | + | chr1.3:63923935-63923954 | None:intergenic | 30.0% | |
GCACCAAAGTTAAGAAAATT+CGG | + | chr1.3:63924375-63924394 | None:intergenic | 30.0% | |
TAAGTTATGGAATGAAGATG+GGG | - | chr1.3:63925397-63925416 | MS.gene20329:CDS | 30.0% | |
TCTACCTCTTCTATAACATT+TGG | + | chr1.3:63924660-63924679 | None:intergenic | 30.0% | |
TTCAATAAACTTCATGCCAA+TGG | - | chr1.3:63924705-63924724 | MS.gene20329:CDS | 30.0% | |
! | ATGCCGAATTTTCTTAACTT+TGG | - | chr1.3:63924369-63924388 | MS.gene20329:CDS | 30.0% |
! | TTACAGACCTTGAGAAATTT+TGG | - | chr1.3:63925237-63925256 | MS.gene20329:CDS | 30.0% |
!! | ACTTGTTGCTTTCTAATGAA+AGG | - | chr1.3:63925350-63925369 | MS.gene20329:CDS | 30.0% |
!! | CTTGTTGCTTTCTAATGAAA+GGG | - | chr1.3:63925351-63925370 | MS.gene20329:CDS | 30.0% |
!! | GAGAAAACTTGTTAATTCGA+CGG | + | chr1.3:63924131-63924150 | None:intergenic | 30.0% |
!!! | AACGTTTTGAGAGTATTGAT+GGG | + | chr1.3:63924432-63924451 | None:intergenic | 30.0% |
!!! | AATGTGAGTTTTTCAAGCAA+CGG | + | chr1.3:63925045-63925064 | None:intergenic | 30.0% |
ACATGTTTATCAACTCGGAT+TGG | - | chr1.3:63924308-63924327 | MS.gene20329:CDS | 35.0% | |
CAGTATTTGACATAGTCCAT+TGG | + | chr1.3:63924724-63924743 | None:intergenic | 35.0% | |
CCAACACATGTTTATCAACT+CGG | - | chr1.3:63924303-63924322 | MS.gene20329:CDS | 35.0% | |
GTTAAGGATACATGTTGCAA+CGG | + | chr1.3:63923962-63923981 | None:intergenic | 35.0% | |
GTTGCTTGAAAAACTCACAT+TGG | - | chr1.3:63925044-63925063 | MS.gene20329:CDS | 35.0% | |
GTTTAAGTCAATGTTCTCAC+CGG | + | chr1.3:63924010-63924029 | None:intergenic | 35.0% | |
TCTAATGAAAGGGAAAGCTT+TGG | - | chr1.3:63925361-63925380 | MS.gene20329:CDS | 35.0% | |
TGGTTAAGGATACAACAATC+CGG | - | chr1.3:63923988-63924007 | MS.gene20329:CDS | 35.0% | |
TTCTCAAGGTCTGTAAGATA+GGG | + | chr1.3:63925233-63925252 | None:intergenic | 35.0% | |
TTGAGAATTTGAGTCTGAAG+AGG | - | chr1.3:63924472-63924491 | MS.gene20329:intron | 35.0% | |
TTTCTCAAGGTCTGTAAGAT+AGG | + | chr1.3:63925234-63925253 | None:intergenic | 35.0% | |
! | GATAAACATGTGTTGGCAAT+TGG | + | chr1.3:63924299-63924318 | None:intergenic | 35.0% |
! | TTTTTGTACTCACTGTCACT+AGG | + | chr1.3:63924936-63924955 | None:intergenic | 35.0% |
!!! | ATGTGAGTTTTTCAAGCAAC+GGG | + | chr1.3:63925044-63925063 | None:intergenic | 35.0% |
!!! | CAACGTTTTGAGAGTATTGA+TGG | + | chr1.3:63924433-63924452 | None:intergenic | 35.0% |
!!! | CCTTTTTGTCGATTCAACTT+CGG | - | chr1.3:63924035-63924054 | MS.gene20329:CDS | 35.0% |
AGCAACAAGTCCTAAGTTCT+TGG | + | chr1.3:63925340-63925359 | None:intergenic | 40.0% | |
ATTGTTTCCCCACAAGTTTG+AGG | + | chr1.3:63924168-63924187 | None:intergenic | 40.0% | |
CCGAAGTTGAATCGACAAAA+AGG | + | chr1.3:63924038-63924057 | None:intergenic | 40.0% | |
CTTCAATCCAACCCAAAGAA+AGG | + | chr1.3:63924407-63924426 | None:intergenic | 40.0% | |
GCACTCAAAGACCTTTCTTT+GGG | - | chr1.3:63924393-63924412 | MS.gene20329:CDS | 40.0% | |
GCGTTTGCCAAAATTTCTCA+AGG | + | chr1.3:63925247-63925266 | None:intergenic | 40.0% | |
TCAAAGACCTTTCTTTGGGT+TGG | - | chr1.3:63924397-63924416 | MS.gene20329:CDS | 40.0% | |
TGCACTCAAAGACCTTTCTT+TGG | - | chr1.3:63924392-63924411 | MS.gene20329:CDS | 40.0% | |
TTGTTTCCCCACAAGTTTGA+GGG | + | chr1.3:63924167-63924186 | None:intergenic | 40.0% | |
TTTCGAACCCTCAAACTTGT+GGG | - | chr1.3:63924157-63924176 | MS.gene20329:intron | 40.0% | |
! | ATTTGAGTCTGAAGAGGTGT+TGG | - | chr1.3:63924478-63924497 | MS.gene20329:intron | 40.0% |
!! | CCGAGTTGATAAACATGTGT+TGG | + | chr1.3:63924306-63924325 | None:intergenic | 40.0% |
!! | TTTGAGTCTGAAGAGGTGTT+GGG | - | chr1.3:63924479-63924498 | MS.gene20329:intron | 40.0% |
AAAAAGGTTGCTCCATCTGC+AGG | - | chr1.3:63924907-63924926 | MS.gene20329:CDS | 45.0% | |
ATTGCGGGAAGAAGTGATTC+TGG | + | chr1.3:63923919-63923938 | None:intergenic | 45.0% | |
GTTTCGAACCCTCAAACTTG+TGG | - | chr1.3:63924156-63924175 | MS.gene20329:intron | 45.0% | |
TGCAAATTCTCTGAACGCTC+TGG | + | chr1.3:63925467-63925486 | None:intergenic | 45.0% | |
TTCGAACCCTCAAACTTGTG+GGG | - | chr1.3:63924158-63924177 | MS.gene20329:intron | 45.0% | |
! | AGTCCTAAGTTCTTGGCTTG+TGG | + | chr1.3:63925333-63925352 | None:intergenic | 45.0% |
!! | TCTGAAGAGGTGTTGGGATT+TGG | - | chr1.3:63924485-63924504 | MS.gene20329:intron | 45.0% |
GAGCCACAAGCCAAGAACTT+AGG | - | chr1.3:63925327-63925346 | MS.gene20329:CDS | 50.0% | |
GGTTTGCAGCTATCTACTCC+AGG | - | chr1.3:63924773-63924792 | MS.gene20329:CDS | 50.0% | |
GTAAACGTTGTGCACGTCGA+CGG | + | chr1.3:63925436-63925455 | None:intergenic | 50.0% | |
! | GTTGCTTTCGTGACACAACG+CGG | - | chr1.3:63924198-63924217 | MS.gene20329:intron | 50.0% |
!! | GAAGAGGTGTTGGGATTTGG+TGG | - | chr1.3:63924488-63924507 | MS.gene20329:intron | 50.0% |
GTCACTAGGTCACCTGCAGA+TGG | + | chr1.3:63924922-63924941 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 63923880 | 63925502 | 63923880 | ID=MS.gene20329 |
chr1.3 | mRNA | 63923880 | 63925502 | 63923880 | ID=MS.gene20329.t1;Parent=MS.gene20329 |
chr1.3 | exon | 63924588 | 63925502 | 63924588 | ID=MS.gene20329.t1.exon1;Parent=MS.gene20329.t1 |
chr1.3 | CDS | 63924588 | 63925502 | 63924588 | ID=cds.MS.gene20329.t1;Parent=MS.gene20329.t1 |
chr1.3 | exon | 63924290 | 63924469 | 63924290 | ID=MS.gene20329.t1.exon2;Parent=MS.gene20329.t1 |
chr1.3 | CDS | 63924290 | 63924469 | 63924290 | ID=cds.MS.gene20329.t1;Parent=MS.gene20329.t1 |
chr1.3 | exon | 63923880 | 63924164 | 63923880 | ID=MS.gene20329.t1.exon3;Parent=MS.gene20329.t1 |
chr1.3 | CDS | 63923880 | 63924164 | 63923880 | ID=cds.MS.gene20329.t1;Parent=MS.gene20329.t1 |
Gene Sequence |
Protein sequence |