Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95993.t1 | XP_013464451.1 | 89.8 | 451 | 46 | 0 | 1 | 451 | 1 | 451 | 4.20E-228 | 800.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95993.t1 | Q9LUC4 | 29.7 | 448 | 268 | 11 | 13 | 445 | 26 | 441 | 1.6e-34 | 148.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95993.t1 | A0A072VA50 | 89.8 | 451 | 46 | 0 | 1 | 451 | 1 | 451 | 3.0e-228 | 800.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene95993 | 0.841382 | 4.91E-58 | -1.69E-46 |
MS.gene049151 | MS.gene95993 | 0.801075 | 1.07E-48 | -1.69E-46 |
MS.gene049153 | MS.gene95993 | 0.837 | 6.73E-57 | -1.69E-46 |
MS.gene049356 | MS.gene95993 | 0.815489 | 9.01E-52 | -1.69E-46 |
MS.gene049681 | MS.gene95993 | 0.805019 | 1.63E-49 | -1.69E-46 |
MS.gene049758 | MS.gene95993 | 0.83967 | 1.38E-57 | -1.69E-46 |
MS.gene049910 | MS.gene95993 | 0.825856 | 3.73E-54 | -1.69E-46 |
MS.gene050301 | MS.gene95993 | 0.843984 | 1.00E-58 | -1.69E-46 |
MS.gene050397 | MS.gene95993 | 0.82116 | 4.68E-53 | -1.69E-46 |
MS.gene050426 | MS.gene95993 | -0.807376 | 5.21E-50 | -1.69E-46 |
MS.gene050464 | MS.gene95993 | 0.802632 | 5.12E-49 | -1.69E-46 |
MS.gene050670 | MS.gene95993 | 0.832301 | 1.02E-55 | -1.69E-46 |
MS.gene050971 | MS.gene95993 | 0.80889 | 2.48E-50 | -1.69E-46 |
MS.gene05105 | MS.gene95993 | 0.802172 | 6.37E-49 | -1.69E-46 |
MS.gene051360 | MS.gene95993 | 0.837508 | 4.99E-57 | -1.69E-46 |
MS.gene051525 | MS.gene95993 | 0.828926 | 6.85E-55 | -1.69E-46 |
MS.gene051568 | MS.gene95993 | 0.801372 | 9.29E-49 | -1.69E-46 |
MS.gene051860 | MS.gene95993 | 0.879613 | 1.08E-69 | -1.69E-46 |
MS.gene051983 | MS.gene95993 | 0.81096 | 8.89E-51 | -1.69E-46 |
MS.gene052011 | MS.gene95993 | -0.822021 | 2.96E-53 | -1.69E-46 |
MS.gene052077 | MS.gene95993 | 0.841619 | 4.26E-58 | -1.69E-46 |
MS.gene052188 | MS.gene95993 | 0.861911 | 7.35E-64 | -1.69E-46 |
MS.gene052253 | MS.gene95993 | 0.857306 | 1.79E-62 | -1.69E-46 |
MS.gene052255 | MS.gene95993 | 0.818617 | 1.78E-52 | -1.69E-46 |
MS.gene052310 | MS.gene95993 | 0.811208 | 7.85E-51 | -1.69E-46 |
MS.gene052340 | MS.gene95993 | 0.84078 | 7.07E-58 | -1.69E-46 |
MS.gene052485 | MS.gene95993 | 0.842691 | 2.22E-58 | -1.69E-46 |
MS.gene053169 | MS.gene95993 | 0.809499 | 1.84E-50 | -1.69E-46 |
MS.gene05316 | MS.gene95993 | 0.811507 | 6.76E-51 | -1.69E-46 |
MS.gene053209 | MS.gene95993 | 0.80262 | 5.15E-49 | -1.69E-46 |
MS.gene053557 | MS.gene95993 | 0.804341 | 2.26E-49 | -1.69E-46 |
MS.gene053836 | MS.gene95993 | 0.860371 | 2.16E-63 | -1.69E-46 |
MS.gene053928 | MS.gene95993 | 0.810635 | 1.05E-50 | -1.69E-46 |
MS.gene054010 | MS.gene95993 | 0.834302 | 3.24E-56 | -1.69E-46 |
MS.gene054011 | MS.gene95993 | 0.827261 | 1.72E-54 | -1.69E-46 |
MS.gene054012 | MS.gene95993 | 0.825109 | 5.61E-54 | -1.69E-46 |
MS.gene054013 | MS.gene95993 | 0.818714 | 1.70E-52 | -1.69E-46 |
MS.gene054183 | MS.gene95993 | 0.844019 | 9.80E-59 | -1.69E-46 |
MS.gene054349 | MS.gene95993 | 0.842163 | 3.06E-58 | -1.69E-46 |
MS.gene054473 | MS.gene95993 | 0.803555 | 3.30E-49 | -1.69E-46 |
MS.gene054556 | MS.gene95993 | 0.856301 | 3.53E-62 | -1.69E-46 |
MS.gene054719 | MS.gene95993 | 0.812054 | 5.14E-51 | -1.69E-46 |
MS.gene054930 | MS.gene95993 | 0.812371 | 4.39E-51 | -1.69E-46 |
MS.gene055116 | MS.gene95993 | 0.845106 | 4.99E-59 | -1.69E-46 |
MS.gene055277 | MS.gene95993 | 0.80898 | 2.37E-50 | -1.69E-46 |
MS.gene055390 | MS.gene95993 | 0.808109 | 3.64E-50 | -1.69E-46 |
MS.gene055422 | MS.gene95993 | 0.820755 | 5.80E-53 | -1.69E-46 |
MS.gene05553 | MS.gene95993 | 0.835613 | 1.52E-56 | -1.69E-46 |
MS.gene055604 | MS.gene95993 | 0.84674 | 1.80E-59 | -1.69E-46 |
MS.gene055666 | MS.gene95993 | 0.817918 | 2.57E-52 | -1.69E-46 |
MS.gene055859 | MS.gene95993 | 0.826716 | 2.33E-54 | -1.69E-46 |
MS.gene056191 | MS.gene95993 | 0.838543 | 2.70E-57 | -1.69E-46 |
MS.gene056407 | MS.gene95993 | 0.817241 | 3.65E-52 | -1.69E-46 |
MS.gene056447 | MS.gene95993 | 0.810787 | 9.69E-51 | -1.69E-46 |
MS.gene056659 | MS.gene95993 | 0.811485 | 6.84E-51 | -1.69E-46 |
MS.gene056723 | MS.gene95993 | 0.826725 | 2.32E-54 | -1.69E-46 |
MS.gene056902 | MS.gene95993 | 0.829184 | 5.93E-55 | -1.69E-46 |
MS.gene057121 | MS.gene95993 | 0.815447 | 9.20E-52 | -1.69E-46 |
MS.gene057330 | MS.gene95993 | 0.826895 | 2.11E-54 | -1.69E-46 |
MS.gene057448 | MS.gene95993 | 0.841512 | 4.54E-58 | -1.69E-46 |
MS.gene057449 | MS.gene95993 | 0.819396 | 1.19E-52 | -1.69E-46 |
MS.gene057450 | MS.gene95993 | 0.828652 | 7.98E-55 | -1.69E-46 |
MS.gene057469 | MS.gene95993 | 0.850078 | 2.14E-60 | -1.69E-46 |
MS.gene057749 | MS.gene95993 | 0.838571 | 2.66E-57 | -1.69E-46 |
MS.gene057796 | MS.gene95993 | 0.801512 | 8.69E-49 | -1.69E-46 |
MS.gene057823 | MS.gene95993 | 0.837493 | 5.03E-57 | -1.69E-46 |
MS.gene058002 | MS.gene95993 | 0.871687 | 5.65E-67 | -1.69E-46 |
MS.gene05811 | MS.gene95993 | 0.870897 | 1.03E-66 | -1.69E-46 |
MS.gene058142 | MS.gene95993 | 0.832163 | 1.11E-55 | -1.69E-46 |
MS.gene058660 | MS.gene95993 | 0.80079 | 1.22E-48 | -1.69E-46 |
MS.gene058700 | MS.gene95993 | 0.806324 | 8.69E-50 | -1.69E-46 |
MS.gene058710 | MS.gene95993 | 0.834849 | 2.36E-56 | -1.69E-46 |
MS.gene05886 | MS.gene95993 | 0.802967 | 4.36E-49 | -1.69E-46 |
MS.gene058928 | MS.gene95993 | 0.809486 | 1.85E-50 | -1.69E-46 |
MS.gene058949 | MS.gene95993 | 0.824722 | 6.92E-54 | -1.69E-46 |
MS.gene05907 | MS.gene95993 | 0.873174 | 1.80E-67 | -1.69E-46 |
MS.gene059082 | MS.gene95993 | 0.802273 | 6.07E-49 | -1.69E-46 |
MS.gene059285 | MS.gene95993 | 0.835244 | 1.88E-56 | -1.69E-46 |
MS.gene059294 | MS.gene95993 | 0.850179 | 2.01E-60 | -1.69E-46 |
MS.gene059366 | MS.gene95993 | 0.802585 | 5.23E-49 | -1.69E-46 |
MS.gene059420 | MS.gene95993 | 0.859714 | 3.42E-63 | -1.69E-46 |
MS.gene059421 | MS.gene95993 | 0.814034 | 1.89E-51 | -1.69E-46 |
MS.gene059462 | MS.gene95993 | 0.821643 | 3.62E-53 | -1.69E-46 |
MS.gene059518 | MS.gene95993 | 0.806216 | 9.16E-50 | -1.69E-46 |
MS.gene059597 | MS.gene95993 | 0.829591 | 4.73E-55 | -1.69E-46 |
MS.gene059676 | MS.gene95993 | 0.820106 | 8.17E-53 | -1.69E-46 |
MS.gene059688 | MS.gene95993 | 0.823717 | 1.19E-53 | -1.69E-46 |
MS.gene059692 | MS.gene95993 | 0.826962 | 2.03E-54 | -1.69E-46 |
MS.gene059695 | MS.gene95993 | 0.828334 | 9.52E-55 | -1.69E-46 |
MS.gene059807 | MS.gene95993 | 0.816941 | 4.27E-52 | -1.69E-46 |
MS.gene05984 | MS.gene95993 | 0.874202 | 8.12E-68 | -1.69E-46 |
MS.gene06037 | MS.gene95993 | 0.812547 | 4.01E-51 | -1.69E-46 |
MS.gene060403 | MS.gene95993 | 0.825592 | 4.31E-54 | -1.69E-46 |
MS.gene060495 | MS.gene95993 | 0.80202 | 6.84E-49 | -1.69E-46 |
MS.gene060837 | MS.gene95993 | 0.805272 | 1.45E-49 | -1.69E-46 |
MS.gene060986 | MS.gene95993 | 0.852862 | 3.49E-61 | -1.69E-46 |
MS.gene061049 | MS.gene95993 | 0.839303 | 1.72E-57 | -1.69E-46 |
MS.gene061154 | MS.gene95993 | 0.834582 | 2.76E-56 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95993.t1 | MTR_2g072530 | 89.800 | 451 | 46 | 0 | 1 | 451 | 1 | 451 | 0.0 | 827 |
MS.gene95993.t1 | MTR_2g072550 | 50.746 | 268 | 60 | 6 | 184 | 451 | 31 | 226 | 3.76e-67 | 214 |
MS.gene95993.t1 | MTR_7g094030 | 34.513 | 452 | 263 | 13 | 12 | 446 | 27 | 462 | 1.19e-66 | 221 |
MS.gene95993.t1 | MTR_2g082880 | 34.058 | 414 | 248 | 11 | 7 | 411 | 4 | 401 | 2.88e-62 | 208 |
MS.gene95993.t1 | MTR_2g082800 | 35.516 | 397 | 242 | 9 | 3 | 398 | 17 | 400 | 1.47e-57 | 195 |
MS.gene95993.t1 | MTR_2g072730 | 34.467 | 441 | 267 | 15 | 10 | 436 | 13 | 445 | 1.74e-56 | 194 |
MS.gene95993.t1 | MTR_2g072720 | 33.262 | 466 | 274 | 15 | 2 | 446 | 28 | 477 | 4.55e-56 | 193 |
MS.gene95993.t1 | MTR_2g082850 | 36.261 | 353 | 202 | 9 | 12 | 350 | 21 | 364 | 7.72e-55 | 187 |
MS.gene95993.t1 | MTR_1g115250 | 31.473 | 448 | 266 | 12 | 2 | 437 | 21 | 439 | 1.70e-54 | 188 |
MS.gene95993.t1 | MTR_4g032845 | 31.971 | 416 | 259 | 13 | 12 | 412 | 2 | 408 | 2.96e-50 | 177 |
MS.gene95993.t1 | MTR_1g025870 | 33.086 | 405 | 236 | 16 | 44 | 430 | 116 | 503 | 1.80e-41 | 154 |
MS.gene95993.t1 | MTR_2g082780 | 39.171 | 217 | 127 | 5 | 1 | 216 | 1 | 213 | 7.39e-40 | 142 |
MS.gene95993.t1 | MTR_6g022350 | 27.468 | 466 | 260 | 15 | 11 | 409 | 4 | 458 | 5.78e-34 | 133 |
MS.gene95993.t1 | MTR_2g067210 | 32.181 | 376 | 213 | 15 | 4 | 353 | 43 | 402 | 6.79e-33 | 130 |
MS.gene95993.t1 | MTR_5g005700 | 27.426 | 474 | 295 | 14 | 11 | 446 | 30 | 492 | 2.36e-28 | 117 |
MS.gene95993.t1 | MTR_4g080590 | 27.397 | 438 | 300 | 12 | 5 | 434 | 15 | 442 | 3.61e-28 | 116 |
MS.gene95993.t1 | MTR_1g115245 | 31.203 | 266 | 161 | 7 | 5 | 261 | 18 | 270 | 1.80e-26 | 108 |
MS.gene95993.t1 | MTR_7g023310 | 25.000 | 416 | 285 | 12 | 11 | 411 | 24 | 427 | 2.76e-25 | 108 |
MS.gene95993.t1 | MTR_4g080787 | 25.322 | 466 | 294 | 14 | 13 | 445 | 19 | 463 | 4.65e-25 | 107 |
MS.gene95993.t1 | MTR_8g006910 | 29.412 | 408 | 244 | 16 | 11 | 400 | 50 | 431 | 6.57e-25 | 107 |
MS.gene95993.t1 | MTR_5g005690 | 23.305 | 472 | 307 | 10 | 18 | 444 | 26 | 487 | 2.49e-22 | 99.8 |
MS.gene95993.t1 | MTR_3g048290 | 25.342 | 438 | 293 | 13 | 13 | 429 | 23 | 447 | 2.57e-22 | 99.8 |
MS.gene95993.t1 | MTR_4g080773 | 25.404 | 433 | 272 | 13 | 13 | 411 | 19 | 434 | 3.72e-21 | 96.3 |
MS.gene95993.t1 | MTR_4g080773 | 25.404 | 433 | 272 | 13 | 13 | 411 | 19 | 434 | 3.79e-21 | 96.3 |
MS.gene95993.t1 | MTR_5g084070 | 23.476 | 443 | 296 | 11 | 13 | 443 | 13 | 424 | 1.89e-20 | 93.6 |
MS.gene95993.t1 | MTR_4g081030 | 29.532 | 342 | 193 | 14 | 9 | 331 | 12 | 324 | 3.49e-20 | 92.4 |
MS.gene95993.t1 | MTR_5g063450 | 30.496 | 282 | 155 | 11 | 12 | 283 | 26 | 276 | 3.76e-20 | 92.0 |
MS.gene95993.t1 | MTR_5g007130 | 25.474 | 475 | 238 | 17 | 8 | 446 | 10 | 404 | 4.20e-19 | 89.4 |
MS.gene95993.t1 | MTR_4g032730 | 23.340 | 497 | 291 | 19 | 5 | 445 | 4 | 466 | 5.44e-19 | 89.4 |
MS.gene95993.t1 | MTR_4g080590 | 27.151 | 372 | 253 | 12 | 5 | 369 | 15 | 375 | 1.12e-17 | 84.7 |
MS.gene95993.t1 | MTR_5g039950 | 24.083 | 436 | 271 | 14 | 12 | 434 | 22 | 410 | 3.28e-17 | 84.0 |
MS.gene95993.t1 | MTR_3g018680 | 25.298 | 419 | 224 | 16 | 11 | 411 | 20 | 367 | 1.17e-16 | 82.0 |
MS.gene95993.t1 | MTR_2g007450 | 21.748 | 469 | 282 | 14 | 7 | 447 | 10 | 421 | 1.72e-15 | 78.6 |
MS.gene95993.t1 | MTR_0049s0110 | 24.356 | 427 | 257 | 18 | 13 | 416 | 8 | 391 | 2.65e-15 | 77.8 |
MS.gene95993.t1 | MTR_8g062080 | 25.367 | 477 | 269 | 21 | 7 | 445 | 17 | 444 | 3.00e-15 | 77.8 |
MS.gene95993.t1 | MTR_2g072710 | 29.012 | 162 | 98 | 4 | 291 | 447 | 46 | 195 | 4.58e-15 | 73.9 |
MS.gene95993.t1 | MTR_1g013560 | 24.885 | 434 | 252 | 17 | 10 | 411 | 16 | 407 | 2.38e-14 | 75.1 |
MS.gene95993.t1 | MTR_8g468810 | 23.871 | 465 | 297 | 19 | 12 | 445 | 24 | 462 | 2.52e-14 | 75.1 |
MS.gene95993.t1 | MTR_8g467800 | 22.912 | 467 | 292 | 16 | 13 | 445 | 20 | 452 | 2.66e-14 | 75.1 |
MS.gene95993.t1 | MTR_2g082860 | 40.594 | 101 | 53 | 3 | 3 | 97 | 17 | 116 | 5.61e-14 | 68.9 |
MS.gene95993.t1 | MTR_7g094050 | 35.714 | 126 | 78 | 2 | 313 | 437 | 2 | 125 | 1.81e-13 | 67.4 |
MS.gene95993.t1 | MTR_2g007400 | 23.707 | 464 | 246 | 20 | 13 | 443 | 12 | 400 | 2.42e-13 | 72.0 |
MS.gene95993.t1 | MTR_2g091145 | 24.229 | 454 | 262 | 21 | 5 | 424 | 13 | 418 | 1.12e-12 | 70.1 |
MS.gene95993.t1 | MTR_0049s0110 | 25.298 | 336 | 205 | 14 | 13 | 342 | 8 | 303 | 3.40e-12 | 67.8 |
MS.gene95993.t1 | MTR_6g045333 | 22.993 | 461 | 272 | 20 | 3 | 445 | 50 | 445 | 3.77e-12 | 68.6 |
MS.gene95993.t1 | MTR_1g013560 | 26.074 | 326 | 191 | 13 | 10 | 321 | 16 | 305 | 5.63e-12 | 67.4 |
MS.gene95993.t1 | MTR_0049s0110 | 25.298 | 336 | 205 | 14 | 13 | 342 | 8 | 303 | 5.88e-12 | 67.0 |
MS.gene95993.t1 | MTR_2g047858 | 26.744 | 172 | 121 | 3 | 13 | 179 | 115 | 286 | 6.86e-12 | 67.8 |
MS.gene95993.t1 | MTR_2g007500 | 27.907 | 258 | 125 | 10 | 13 | 244 | 14 | 236 | 1.73e-11 | 65.9 |
MS.gene95993.t1 | MTR_0049s0110 | 32.667 | 150 | 94 | 6 | 13 | 159 | 8 | 153 | 4.83e-11 | 63.5 |
MS.gene95993.t1 | MTR_7g023330 | 23.981 | 417 | 238 | 16 | 9 | 411 | 15 | 366 | 6.12e-11 | 64.3 |
MS.gene95993.t1 | MTR_5g080710 | 22.124 | 452 | 314 | 12 | 13 | 451 | 33 | 459 | 7.11e-11 | 64.3 |
MS.gene95993.t1 | MTR_1g021825 | 23.126 | 467 | 282 | 21 | 7 | 447 | 11 | 426 | 7.70e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95993.t1 | AT3G14710 | 29.054 | 444 | 276 | 10 | 13 | 445 | 26 | 441 | 6.21e-40 | 149 |
MS.gene95993.t1 | AT4G26340 | 25.446 | 448 | 288 | 13 | 13 | 445 | 2 | 418 | 1.15e-21 | 97.1 |
MS.gene95993.t1 | AT4G10400 | 24.944 | 445 | 286 | 13 | 13 | 446 | 2 | 409 | 7.11e-21 | 94.7 |
MS.gene95993.t1 | AT4G10400 | 24.944 | 445 | 286 | 13 | 13 | 446 | 2 | 409 | 7.11e-21 | 94.7 |
MS.gene95993.t1 | AT4G10400 | 24.944 | 445 | 286 | 13 | 13 | 446 | 2 | 409 | 7.11e-21 | 94.7 |
MS.gene95993.t1 | AT3G59200 | 25.053 | 471 | 301 | 15 | 12 | 444 | 6 | 462 | 8.08e-20 | 92.4 |
MS.gene95993.t1 | AT3G03030 | 25.694 | 432 | 282 | 14 | 13 | 411 | 2 | 427 | 1.02e-19 | 91.7 |
MS.gene95993.t1 | AT2G42730 | 24.897 | 486 | 286 | 19 | 12 | 451 | 4 | 456 | 1.29e-19 | 91.3 |
MS.gene95993.t1 | AT3G59200 | 27.100 | 369 | 231 | 10 | 12 | 353 | 6 | 363 | 1.77e-19 | 90.1 |
MS.gene95993.t1 | AT2G26860 | 25.000 | 428 | 261 | 15 | 13 | 412 | 2 | 397 | 1.43e-18 | 87.8 |
MS.gene95993.t1 | AT2G26860 | 25.000 | 428 | 261 | 15 | 13 | 412 | 2 | 397 | 1.43e-18 | 87.8 |
MS.gene95993.t1 | AT3G03030 | 27.070 | 314 | 201 | 10 | 13 | 303 | 2 | 310 | 3.11e-18 | 85.9 |
MS.gene95993.t1 | AT5G22730 | 25.272 | 459 | 297 | 18 | 10 | 443 | 26 | 463 | 4.41e-18 | 86.7 |
MS.gene95993.t1 | AT5G22730 | 25.272 | 459 | 297 | 18 | 10 | 443 | 26 | 463 | 4.41e-18 | 86.7 |
MS.gene95993.t1 | AT5G56560 | 24.045 | 445 | 290 | 14 | 15 | 445 | 7 | 417 | 1.20e-17 | 85.1 |
MS.gene95993.t1 | AT5G38590 | 23.678 | 435 | 290 | 11 | 13 | 435 | 2 | 406 | 2.18e-17 | 84.3 |
MS.gene95993.t1 | AT4G14096 | 26.796 | 362 | 228 | 11 | 10 | 353 | 5 | 347 | 2.27e-17 | 84.7 |
MS.gene95993.t1 | AT4G14096 | 26.796 | 362 | 228 | 11 | 10 | 353 | 5 | 347 | 2.27e-17 | 84.7 |
MS.gene95993.t1 | AT3G03040 | 24.516 | 465 | 288 | 17 | 13 | 438 | 2 | 442 | 3.63e-17 | 84.0 |
MS.gene95993.t1 | AT5G56820 | 25.000 | 460 | 291 | 18 | 1 | 443 | 1 | 423 | 9.95e-17 | 82.4 |
MS.gene95993.t1 | AT2G29930 | 25.773 | 485 | 290 | 21 | 3 | 445 | 2 | 458 | 1.23e-16 | 82.4 |
MS.gene95993.t1 | AT2G29930 | 25.773 | 485 | 290 | 21 | 3 | 445 | 2 | 458 | 1.23e-16 | 82.4 |
MS.gene95993.t1 | AT4G14103 | 25.978 | 358 | 241 | 12 | 10 | 352 | 5 | 353 | 1.60e-16 | 81.3 |
MS.gene95993.t1 | AT4G14103 | 25.978 | 358 | 241 | 12 | 10 | 352 | 5 | 353 | 1.60e-16 | 81.3 |
MS.gene95993.t1 | AT3G58930 | 24.896 | 482 | 299 | 17 | 13 | 445 | 2 | 469 | 1.94e-16 | 82.0 |
MS.gene95993.t1 | AT3G58930 | 24.896 | 482 | 299 | 17 | 13 | 445 | 2 | 469 | 1.94e-16 | 82.0 |
MS.gene95993.t1 | AT3G58930 | 24.896 | 482 | 299 | 17 | 13 | 445 | 2 | 469 | 1.94e-16 | 82.0 |
MS.gene95993.t1 | AT4G14103 | 25.978 | 358 | 241 | 12 | 10 | 352 | 5 | 353 | 3.15e-16 | 80.9 |
MS.gene95993.t1 | AT3G42770 | 26.609 | 466 | 263 | 23 | 15 | 444 | 1 | 423 | 5.27e-16 | 80.9 |
MS.gene95993.t1 | AT4G09920 | 30.108 | 186 | 119 | 4 | 13 | 194 | 2 | 180 | 6.35e-16 | 78.6 |
MS.gene95993.t1 | AT4G09920 | 30.108 | 186 | 119 | 4 | 13 | 194 | 2 | 180 | 6.35e-16 | 78.6 |
MS.gene95993.t1 | AT4G09920 | 30.108 | 186 | 119 | 4 | 13 | 194 | 2 | 180 | 6.35e-16 | 78.6 |
MS.gene95993.t1 | AT4G09920 | 30.108 | 186 | 119 | 4 | 13 | 194 | 2 | 180 | 7.16e-16 | 78.6 |
MS.gene95993.t1 | AT4G09920 | 30.108 | 186 | 119 | 4 | 13 | 194 | 2 | 180 | 7.16e-16 | 78.6 |
MS.gene95993.t1 | AT3G60040 | 26.577 | 444 | 261 | 17 | 1 | 404 | 1 | 419 | 2.33e-15 | 79.0 |
MS.gene95993.t1 | AT3G60040 | 26.577 | 444 | 261 | 17 | 1 | 404 | 218 | 636 | 2.34e-15 | 79.0 |
MS.gene95993.t1 | AT3G60040 | 26.577 | 444 | 261 | 17 | 1 | 404 | 220 | 638 | 2.45e-15 | 79.0 |
MS.gene95993.t1 | AT2G26030 | 22.844 | 429 | 277 | 16 | 13 | 411 | 4 | 408 | 2.59e-15 | 78.2 |
MS.gene95993.t1 | AT2G26030 | 22.844 | 429 | 277 | 16 | 13 | 411 | 4 | 408 | 2.59e-15 | 78.2 |
MS.gene95993.t1 | AT2G26030 | 22.654 | 437 | 273 | 16 | 13 | 411 | 4 | 413 | 2.89e-15 | 78.2 |
MS.gene95993.t1 | AT3G60040 | 26.577 | 444 | 261 | 17 | 1 | 404 | 221 | 639 | 2.97e-15 | 79.0 |
MS.gene95993.t1 | AT3G58940 | 26.203 | 374 | 220 | 14 | 13 | 359 | 2 | 346 | 3.01e-15 | 78.6 |
MS.gene95993.t1 | AT3G58940 | 26.203 | 374 | 220 | 14 | 13 | 359 | 2 | 346 | 3.01e-15 | 78.6 |
MS.gene95993.t1 | AT3G60040 | 26.577 | 444 | 261 | 17 | 1 | 404 | 220 | 638 | 3.08e-15 | 79.0 |
MS.gene95993.t1 | AT3G26922 | 25.541 | 231 | 160 | 5 | 13 | 240 | 14 | 235 | 3.49e-15 | 76.6 |
MS.gene95993.t1 | AT3G26922 | 25.541 | 231 | 160 | 5 | 13 | 240 | 14 | 235 | 3.49e-15 | 76.6 |
MS.gene95993.t1 | AT1G06630 | 27.778 | 378 | 229 | 17 | 1 | 356 | 10 | 365 | 4.14e-15 | 77.4 |
MS.gene95993.t1 | AT1G06630 | 27.778 | 378 | 229 | 17 | 1 | 356 | 1 | 356 | 4.21e-15 | 77.4 |
MS.gene95993.t1 | AT1G06630 | 27.778 | 378 | 229 | 17 | 1 | 356 | 1 | 356 | 4.21e-15 | 77.4 |
MS.gene95993.t1 | AT1G06630 | 27.778 | 378 | 229 | 17 | 1 | 356 | 1 | 356 | 4.21e-15 | 77.4 |
MS.gene95993.t1 | AT1G06630 | 27.778 | 378 | 229 | 17 | 1 | 356 | 1 | 356 | 4.21e-15 | 77.4 |
MS.gene95993.t1 | AT3G59230 | 24.593 | 492 | 297 | 20 | 5 | 444 | 4 | 473 | 4.49e-15 | 77.8 |
MS.gene95993.t1 | AT2G29910 | 28.444 | 225 | 141 | 7 | 9 | 227 | 1 | 211 | 5.32e-15 | 76.3 |
MS.gene95993.t1 | AT2G29910 | 28.444 | 225 | 141 | 7 | 9 | 227 | 1 | 211 | 5.32e-15 | 76.3 |
MS.gene95993.t1 | AT3G44060 | 24.661 | 442 | 298 | 13 | 18 | 444 | 4 | 425 | 5.33e-15 | 77.0 |
MS.gene95993.t1 | AT1G06630 | 27.778 | 378 | 229 | 17 | 1 | 356 | 1 | 356 | 6.51e-15 | 77.0 |
MS.gene95993.t1 | AT1G06630 | 27.346 | 373 | 229 | 16 | 1 | 353 | 1 | 351 | 7.53e-15 | 76.3 |
MS.gene95993.t1 | AT1G06630 | 27.346 | 373 | 229 | 16 | 1 | 353 | 1 | 351 | 7.53e-15 | 76.3 |
MS.gene95993.t1 | AT5G56380 | 23.684 | 456 | 308 | 15 | 13 | 446 | 2 | 439 | 8.48e-15 | 76.6 |
MS.gene95993.t1 | AT5G56380 | 23.684 | 456 | 308 | 15 | 13 | 446 | 2 | 439 | 8.48e-15 | 76.6 |
MS.gene95993.t1 | AT2G29910 | 28.444 | 225 | 141 | 7 | 9 | 227 | 1 | 211 | 9.02e-15 | 75.9 |
MS.gene95993.t1 | AT2G29910 | 28.444 | 225 | 141 | 7 | 9 | 227 | 1 | 211 | 9.02e-15 | 75.9 |
MS.gene95993.t1 | AT2G29910 | 28.444 | 225 | 141 | 7 | 9 | 227 | 1 | 211 | 9.02e-15 | 75.9 |
MS.gene95993.t1 | AT2G29910 | 28.444 | 225 | 141 | 7 | 9 | 227 | 1 | 211 | 9.02e-15 | 75.9 |
MS.gene95993.t1 | AT2G29910 | 28.444 | 225 | 141 | 7 | 9 | 227 | 25 | 235 | 1.06e-14 | 75.9 |
MS.gene95993.t1 | AT1G55030 | 24.700 | 417 | 262 | 17 | 13 | 412 | 19 | 400 | 2.22e-14 | 75.1 |
MS.gene95993.t1 | AT1G55030 | 25.000 | 408 | 254 | 17 | 13 | 403 | 9 | 381 | 2.55e-14 | 75.1 |
MS.gene95993.t1 | AT5G56420 | 22.052 | 458 | 298 | 14 | 9 | 445 | 2 | 421 | 3.92e-14 | 74.3 |
MS.gene95993.t1 | AT5G56420 | 22.052 | 458 | 298 | 14 | 9 | 445 | 2 | 421 | 3.92e-14 | 74.3 |
MS.gene95993.t1 | AT5G56420 | 22.052 | 458 | 298 | 14 | 9 | 445 | 2 | 421 | 3.92e-14 | 74.3 |
MS.gene95993.t1 | AT3G59240 | 26.078 | 464 | 297 | 18 | 12 | 444 | 7 | 455 | 4.81e-14 | 74.7 |
MS.gene95993.t1 | AT3G59210 | 25.161 | 465 | 306 | 17 | 12 | 444 | 6 | 460 | 8.10e-14 | 73.9 |
MS.gene95993.t1 | AT3G59210 | 25.161 | 465 | 306 | 17 | 12 | 444 | 6 | 460 | 8.10e-14 | 73.9 |
MS.gene95993.t1 | AT3G59210 | 25.161 | 465 | 306 | 17 | 12 | 444 | 6 | 460 | 8.10e-14 | 73.9 |
MS.gene95993.t1 | AT3G59210 | 25.161 | 465 | 306 | 17 | 12 | 444 | 6 | 460 | 8.10e-14 | 73.9 |
MS.gene95993.t1 | AT3G59210 | 25.161 | 465 | 306 | 17 | 12 | 444 | 6 | 460 | 8.10e-14 | 73.9 |
MS.gene95993.t1 | AT1G48400 | 27.826 | 230 | 147 | 7 | 12 | 230 | 9 | 230 | 1.18e-13 | 73.2 |
MS.gene95993.t1 | AT1G48400 | 27.826 | 230 | 147 | 7 | 12 | 230 | 9 | 230 | 1.18e-13 | 73.2 |
MS.gene95993.t1 | AT1G06630 | 28.814 | 236 | 152 | 9 | 1 | 226 | 1 | 230 | 1.62e-13 | 71.6 |
MS.gene95993.t1 | AT1G69630 | 33.173 | 208 | 113 | 8 | 1 | 194 | 1 | 196 | 2.40e-13 | 72.0 |
MS.gene95993.t1 | AT4G13965 | 23.133 | 415 | 270 | 11 | 5 | 403 | 2 | 383 | 2.82e-13 | 71.6 |
MS.gene95993.t1 | AT3G58860 | 25.424 | 354 | 234 | 13 | 13 | 353 | 7 | 343 | 3.99e-13 | 71.6 |
MS.gene95993.t1 | AT4G26350 | 29.310 | 174 | 109 | 5 | 13 | 180 | 2 | 167 | 4.23e-13 | 71.2 |
MS.gene95993.t1 | AT4G00160 | 23.207 | 474 | 297 | 15 | 2 | 445 | 5 | 441 | 4.34e-13 | 71.2 |
MS.gene95993.t1 | AT3G59190 | 30.769 | 130 | 82 | 3 | 10 | 133 | 9 | 136 | 4.92e-13 | 70.9 |
MS.gene95993.t1 | AT4G27050 | 22.020 | 495 | 282 | 20 | 11 | 445 | 2 | 452 | 4.97e-13 | 71.2 |
MS.gene95993.t1 | AT4G27050 | 22.020 | 495 | 282 | 20 | 11 | 445 | 2 | 452 | 4.97e-13 | 71.2 |
MS.gene95993.t1 | AT4G27050 | 22.020 | 495 | 282 | 20 | 11 | 445 | 2 | 452 | 4.97e-13 | 71.2 |
MS.gene95993.t1 | AT4G27050 | 22.020 | 495 | 282 | 20 | 11 | 445 | 2 | 452 | 4.97e-13 | 71.2 |
MS.gene95993.t1 | AT4G27050 | 22.020 | 495 | 282 | 20 | 11 | 445 | 2 | 452 | 4.97e-13 | 71.2 |
MS.gene95993.t1 | AT1G16930 | 21.842 | 467 | 312 | 14 | 6 | 443 | 4 | 446 | 5.22e-13 | 71.2 |
MS.gene95993.t1 | AT1G16930 | 21.842 | 467 | 312 | 14 | 6 | 443 | 4 | 446 | 5.22e-13 | 71.2 |
MS.gene95993.t1 | AT1G16930 | 21.842 | 467 | 312 | 14 | 6 | 443 | 4 | 446 | 5.22e-13 | 71.2 |
MS.gene95993.t1 | AT3G59190 | 25.106 | 235 | 166 | 5 | 3 | 229 | 2 | 234 | 9.07e-13 | 70.5 |
MS.gene95993.t1 | AT5G60610 | 26.056 | 426 | 249 | 17 | 13 | 412 | 2 | 387 | 9.41e-13 | 70.1 |
MS.gene95993.t1 | AT5G60610 | 26.056 | 426 | 249 | 17 | 13 | 412 | 2 | 387 | 9.41e-13 | 70.1 |
MS.gene95993.t1 | AT3G58900 | 25.610 | 410 | 257 | 17 | 13 | 385 | 2 | 400 | 1.14e-12 | 70.1 |
MS.gene95993.t1 | AT3G52680 | 21.245 | 466 | 314 | 12 | 2 | 445 | 10 | 444 | 1.32e-12 | 69.7 |
MS.gene95993.t1 | AT3G58880 | 25.069 | 363 | 244 | 13 | 13 | 357 | 3 | 355 | 1.46e-12 | 69.7 |
MS.gene95993.t1 | AT1G78750 | 29.126 | 206 | 131 | 7 | 1 | 194 | 1 | 203 | 1.69e-12 | 69.7 |
MS.gene95993.t1 | AT1G78750 | 29.126 | 206 | 131 | 7 | 1 | 194 | 1 | 203 | 1.69e-12 | 69.7 |
MS.gene95993.t1 | AT1G78840 | 23.438 | 448 | 308 | 16 | 12 | 443 | 4 | 432 | 2.46e-12 | 68.9 |
MS.gene95993.t1 | AT1G78840 | 23.438 | 448 | 308 | 16 | 12 | 443 | 4 | 432 | 2.46e-12 | 68.9 |
MS.gene95993.t1 | AT4G13960 | 24.263 | 441 | 258 | 17 | 13 | 407 | 2 | 412 | 3.29e-12 | 68.6 |
MS.gene95993.t1 | AT4G13960 | 24.263 | 441 | 258 | 17 | 13 | 407 | 2 | 412 | 3.29e-12 | 68.6 |
MS.gene95993.t1 | AT1G66310 | 23.941 | 472 | 271 | 20 | 11 | 443 | 17 | 439 | 3.33e-12 | 68.6 |
MS.gene95993.t1 | AT4G10410 | 29.762 | 168 | 106 | 3 | 31 | 197 | 5 | 161 | 4.62e-12 | 66.6 |
MS.gene95993.t1 | AT5G38392 | 31.544 | 149 | 91 | 4 | 13 | 152 | 2 | 148 | 4.77e-12 | 65.9 |
MS.gene95993.t1 | AT1G21990 | 23.779 | 471 | 308 | 18 | 12 | 445 | 8 | 464 | 6.60e-12 | 67.8 |
MS.gene95993.t1 | AT5G38590 | 27.103 | 214 | 145 | 4 | 13 | 223 | 2 | 207 | 7.28e-12 | 66.2 |
MS.gene95993.t1 | AT1G64540 | 26.744 | 344 | 194 | 15 | 12 | 346 | 4 | 298 | 7.45e-12 | 67.4 |
MS.gene95993.t1 | AT1G64540 | 26.744 | 344 | 194 | 15 | 12 | 346 | 4 | 298 | 7.45e-12 | 67.4 |
MS.gene95993.t1 | AT3G49030 | 24.454 | 458 | 293 | 18 | 11 | 448 | 19 | 443 | 7.70e-12 | 67.4 |
MS.gene95993.t1 | AT1G58310 | 26.385 | 379 | 231 | 14 | 12 | 352 | 7 | 375 | 8.08e-12 | 67.4 |
MS.gene95993.t1 | AT5G56690 | 24.181 | 397 | 261 | 14 | 15 | 392 | 4 | 379 | 8.47e-12 | 67.0 |
MS.gene95993.t1 | AT4G13985 | 30.675 | 163 | 97 | 6 | 1 | 148 | 1 | 162 | 9.03e-12 | 67.4 |
MS.gene95993.t1 | AT3G50710 | 20.961 | 458 | 300 | 16 | 13 | 443 | 2 | 424 | 1.38e-11 | 66.6 |
MS.gene95993.t1 | AT3G49150 | 25.686 | 401 | 246 | 16 | 10 | 377 | 13 | 394 | 1.92e-11 | 66.2 |
MS.gene95993.t1 | AT5G41830 | 27.374 | 179 | 109 | 3 | 1 | 158 | 1 | 179 | 2.27e-11 | 66.2 |
MS.gene95993.t1 | AT5G22730 | 26.359 | 368 | 231 | 15 | 10 | 354 | 26 | 376 | 2.53e-11 | 65.5 |
MS.gene95993.t1 | AT1G78760 | 22.965 | 479 | 273 | 21 | 10 | 443 | 13 | 440 | 4.01e-11 | 65.1 |
MS.gene95993.t1 | AT5G56440 | 31.977 | 172 | 104 | 7 | 13 | 178 | 2 | 166 | 4.36e-11 | 65.1 |
MS.gene95993.t1 | AT1G80470 | 22.075 | 453 | 318 | 13 | 3 | 443 | 5 | 434 | 4.55e-11 | 65.1 |
MS.gene95993.t1 | AT3G49030 | 28.704 | 216 | 141 | 6 | 11 | 221 | 19 | 226 | 5.28e-11 | 64.7 |
MS.gene95993.t1 | AT3G26922 | 22.816 | 206 | 148 | 4 | 29 | 232 | 1 | 197 | 5.41e-11 | 63.5 |
MS.gene95993.t1 | AT3G26922 | 22.816 | 206 | 148 | 4 | 29 | 232 | 1 | 197 | 5.41e-11 | 63.5 |
MS.gene95993.t1 | AT5G41630 | 28.177 | 181 | 113 | 6 | 10 | 175 | 9 | 187 | 6.52e-11 | 64.7 |
MS.gene95993.t1 | AT3G58900 | 36.434 | 129 | 72 | 5 | 13 | 133 | 2 | 128 | 8.04e-11 | 63.5 |
Find 54 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAAGTATTTCAGTTTAA+AGG | 0.139696 | 2.4:-23670051 | MS.gene95993:CDS |
AAAGGAACAGTTTGTGAATT+TGG | 0.212569 | 2.4:-23671495 | MS.gene95993:CDS |
AAACAAGAGTGTTAAGAATA+GGG | 0.284563 | 2.4:+23670555 | None:intergenic |
ATCATGTAAATATGCCATTA+AGG | 0.287357 | 2.4:-23671015 | MS.gene95993:CDS |
GCATCGACTATAAACCTTAA+TGG | 0.306271 | 2.4:+23671001 | None:intergenic |
CAAGAAGATGGATTGATGTT+TGG | 0.317460 | 2.4:-23671580 | MS.gene95993:CDS |
TGTTGTTGATGAAGATAAAA+AGG | 0.327183 | 2.4:-23670892 | MS.gene95993:CDS |
TTCACCAATCTGCCTGTCTT+TGG | 0.335476 | 2.4:-23670644 | MS.gene95993:CDS |
AAAACAAGAGTGTTAAGAAT+AGG | 0.349193 | 2.4:+23670554 | None:intergenic |
ATTTGAGAGACAAACAGATA+TGG | 0.372417 | 2.4:+23671235 | None:intergenic |
TCTCCTACTGTTGTTTCCCT+TGG | 0.376624 | 2.4:+23671695 | None:intergenic |
AAACTAATGTTCTGTGTTGT+TGG | 0.384561 | 2.4:+23671095 | None:intergenic |
CCTAACAGATTTCTCTTATG+AGG | 0.392166 | 2.4:-23670979 | MS.gene95993:CDS |
TTAAGCAAAGTGAGAAACTT+TGG | 0.394271 | 2.4:+23671435 | None:intergenic |
GAACGAGCACGATCTTTGTT+TGG | 0.397360 | 2.4:-23670019 | MS.gene95993:CDS |
TACATGATTCATTTGAATGA+TGG | 0.398273 | 2.4:+23671030 | None:intergenic |
TTGCAGTTGTTAGATACCTT+TGG | 0.400531 | 2.4:+23669880 | None:intergenic |
GGATTTGCTTTATCTTAGAT+AGG | 0.419517 | 2.4:-23671376 | MS.gene95993:CDS |
TGTTGATTTGAAGAAAGTTA+AGG | 0.423111 | 2.4:-23669920 | MS.gene95993:CDS |
TGTTAAGAATAGGGGAATTG+TGG | 0.424474 | 2.4:+23670564 | None:intergenic |
TAAGAGTACATTTCATTTGA+AGG | 0.429355 | 2.4:+23671264 | None:intergenic |
CCTTCCAAAGACAGGCAGAT+TGG | 0.430732 | 2.4:+23670640 | None:intergenic |
GCTTCAAACACTTCGAGAAT+CGG | 0.436599 | 2.4:+23671134 | None:intergenic |
ATGCTTCTAAGTTAAGTGAA+TGG | 0.451744 | 2.4:-23671397 | MS.gene95993:CDS |
CTTCAAACACTTCGAGAATC+GGG | 0.453204 | 2.4:+23671135 | None:intergenic |
ACTATCATCAAAATCAAGAT+TGG | 0.463235 | 2.4:+23671547 | None:intergenic |
GTTGGCAGATGCAGCAATCA+TGG | 0.478397 | 2.4:-23669986 | MS.gene95993:CDS |
CTACGATTGGAATGAAATAC+AGG | 0.479095 | 2.4:+23671627 | None:intergenic |
CTAGCGTCTTATCAAGAAGA+TGG | 0.494487 | 2.4:-23671592 | MS.gene95993:CDS |
TTTGAGAGACAAACAGATAT+GGG | 0.503543 | 2.4:+23671236 | None:intergenic |
TAAGTTAACCTTCCAAAGAC+AGG | 0.506614 | 2.4:+23670632 | None:intergenic |
CCTCATAAGAGAAATCTGTT+AGG | 0.515819 | 2.4:+23670979 | None:intergenic |
AACTTATCTGCAACTAAATG+AGG | 0.518407 | 2.4:-23670615 | MS.gene95993:CDS |
GTGCTAACCGTGTCTACGAT+TGG | 0.518461 | 2.4:+23671614 | None:intergenic |
CCAATCTGCCTGTCTTTGGA+AGG | 0.521176 | 2.4:-23670640 | MS.gene95993:CDS |
AAGAGTACATTTCATTTGAA+GGG | 0.524641 | 2.4:+23671265 | None:intergenic |
AACAAGAGTGTTAAGAATAG+GGG | 0.527875 | 2.4:+23670556 | None:intergenic |
CTAACAGATTTCTCTTATGA+GGG | 0.536932 | 2.4:-23670978 | MS.gene95993:CDS |
CTCGAAGTGTTTGAAGCTAG+AGG | 0.540229 | 2.4:-23671128 | MS.gene95993:CDS |
GGAGATGATGATGATATCGC+CGG | 0.568358 | 2.4:-23669965 | MS.gene95993:CDS |
CTGCAACTAAATGAGGTCAC+TGG | 0.573768 | 2.4:-23670608 | MS.gene95993:CDS |
ATGATGGTTCCATATTGCTA+TGG | 0.577377 | 2.4:+23671046 | None:intergenic |
ATGGAAAACTTCTCAAGTAA+CGG | 0.587903 | 2.4:+23671065 | None:intergenic |
TCGAAGTGTTTGAAGCTAGA+GGG | 0.587975 | 2.4:-23671127 | MS.gene95993:CDS |
TTGTTTGGTAAAATTCGTGT+TGG | 0.601366 | 2.4:-23670004 | MS.gene95993:CDS |
AGATGTCTTTACTTCTGCAA+CGG | 0.610724 | 2.4:-23670097 | MS.gene95993:CDS |
TTGAAGCTAGAGGGTGCGAA+TGG | 0.623897 | 2.4:-23671118 | MS.gene95993:CDS |
TTTCATTCCAATCGTAGACA+CGG | 0.627142 | 2.4:-23671621 | MS.gene95993:CDS |
GCAGATACTCTCATTACCAA+AGG | 0.643815 | 2.4:-23669896 | MS.gene95993:CDS |
GGTAGTCATGGATTCACCAA+GGG | 0.655137 | 2.4:-23671711 | None:intergenic |
TCACCAAGGGAAACAACAGT+AGG | 0.661012 | 2.4:-23671698 | MS.gene95993:CDS |
TCTCAAACAAATCGATAACG+TGG | 0.671900 | 2.4:-23670832 | MS.gene95993:CDS |
AGGTAGTCATGGATTCACCA+AGG | 0.701421 | 2.4:-23671712 | None:intergenic |
AAGCTTGACTGAAAGCAGTG+AGG | 0.715060 | 2.4:+23670072 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAATTTCTTTGAACAAA+AGG | + | chr2.4:23671051-23671070 | None:intergenic | 15.0% |
!! | TTAAAAAATTTAGCATATCT+GGG | - | chr2.4:23670342-23670361 | MS.gene95993:intron | 15.0% |
!! | CTTAAAAAATTTAGCATATC+TGG | - | chr2.4:23670341-23670360 | MS.gene95993:intron | 20.0% |
!!! | AGTGTTTATTTTTTTGAAGA+AGG | + | chr2.4:23671147-23671166 | None:intergenic | 20.0% |
!!! | GTTTTACTTAATGTAAGTTT+AGG | - | chr2.4:23671017-23671036 | MS.gene95993:CDS | 20.0% |
!!! | TTCAAAGTATTTCAGTTTAA+AGG | - | chr2.4:23671502-23671521 | MS.gene95993:CDS | 20.0% |
! | AACATAACTGCTTATGTATA+AGG | + | chr2.4:23671315-23671334 | None:intergenic | 25.0% |
! | ACTATCATCAAAATCAAGAT+TGG | + | chr2.4:23670009-23670028 | None:intergenic | 25.0% |
! | ATCATGTAAATATGCCATTA+AGG | - | chr2.4:23670538-23670557 | MS.gene95993:intron | 25.0% |
! | CATGACACAAAAAAATTTCA+GGG | - | chr2.4:23671415-23671434 | MS.gene95993:CDS | 25.0% |
! | TAAGAAGAAAAAGATGCAAA+AGG | - | chr2.4:23670040-23670059 | MS.gene95993:CDS | 25.0% |
! | TACATGATTCATTTGAATGA+TGG | + | chr2.4:23670526-23670545 | None:intergenic | 25.0% |
! | TCATGACACAAAAAAATTTC+AGG | - | chr2.4:23671414-23671433 | MS.gene95993:CDS | 25.0% |
! | TGAAGATAAAAAGGATAGAA+TGG | - | chr2.4:23670670-23670689 | MS.gene95993:CDS | 25.0% |
!! | AAGAGTACATTTCATTTGAA+GGG | + | chr2.4:23670291-23670310 | None:intergenic | 25.0% |
!! | AGTTATATCTTTTGAATCAG+TGG | + | chr2.4:23670390-23670409 | None:intergenic | 25.0% |
!! | ATAGCTTTTATGAAATCAGT+TGG | - | chr2.4:23671261-23671280 | MS.gene95993:CDS | 25.0% |
!! | ATTAAGTTGTTTATCCAGAA+AGG | - | chr2.4:23671346-23671365 | MS.gene95993:CDS | 25.0% |
!! | TAAGAGTACATTTCATTTGA+AGG | + | chr2.4:23670292-23670311 | None:intergenic | 25.0% |
!! | TGTTGTTGATGAAGATAAAA+AGG | - | chr2.4:23670661-23670680 | MS.gene95993:CDS | 25.0% |
!! | TTAAGTTGTTTATCCAGAAA+GGG | - | chr2.4:23671347-23671366 | MS.gene95993:CDS | 25.0% |
!! | TTTCTTTTACGATACATGAA+CGG | - | chr2.4:23670778-23670797 | MS.gene95993:intron | 25.0% |
!!! | AAAACAAGAGTGTTAAGAAT+AGG | + | chr2.4:23671002-23671021 | None:intergenic | 25.0% |
!!! | AAACAAGAGTGTTAAGAATA+GGG | + | chr2.4:23671001-23671020 | None:intergenic | 25.0% |
!!! | GCTAAAGTTATTGTTTTACA+AGG | - | chr2.4:23670748-23670767 | MS.gene95993:intron | 25.0% |
!!! | TGTTGATTTGAAGAAAGTTA+AGG | - | chr2.4:23671633-23671652 | MS.gene95993:CDS | 25.0% |
AAACTAATGTTCTGTGTTGT+TGG | + | chr2.4:23670461-23670480 | None:intergenic | 30.0% | |
AAAGGAACAGTTTGTGAATT+TGG | - | chr2.4:23670058-23670077 | MS.gene95993:CDS | 30.0% | |
AACTTATCTGCAACTAAATG+AGG | - | chr2.4:23670938-23670957 | MS.gene95993:CDS | 30.0% | |
ATGCTTCTAAGTTAAGTGAA+TGG | - | chr2.4:23670156-23670175 | MS.gene95993:intron | 30.0% | |
ATGGAAAACTTCTCAAGTAA+CGG | + | chr2.4:23670491-23670510 | None:intergenic | 30.0% | |
ATTTGAGAGACAAACAGATA+TGG | + | chr2.4:23670321-23670340 | None:intergenic | 30.0% | |
CTAACAGATTTCTCTTATGA+GGG | - | chr2.4:23670575-23670594 | MS.gene95993:CDS | 30.0% | |
GAGTCTATGAAAACAACTTA+AGG | + | chr2.4:23671215-23671234 | None:intergenic | 30.0% | |
TTAAGCAAAGTGAGAAACTT+TGG | + | chr2.4:23670121-23670140 | None:intergenic | 30.0% | |
TTGTTTGGTAAAATTCGTGT+TGG | - | chr2.4:23671549-23671568 | MS.gene95993:CDS | 30.0% | |
TTTGAGAGACAAACAGATAT+GGG | + | chr2.4:23670320-23670339 | None:intergenic | 30.0% | |
! | AGAAGTTTTCCATAGCAATA+TGG | - | chr2.4:23670498-23670517 | MS.gene95993:intron | 30.0% |
! | GGATTTGCTTTATCTTAGAT+AGG | - | chr2.4:23670177-23670196 | MS.gene95993:intron | 30.0% |
! | TAAATTTTTCCTTGTCCTAC+AGG | - | chr2.4:23670863-23670882 | MS.gene95993:CDS | 30.0% |
! | TATATCTTTTGAATCAGTGG+AGG | + | chr2.4:23670387-23670406 | None:intergenic | 30.0% |
!! | AACAAGAGTGTTAAGAATAG+GGG | + | chr2.4:23671000-23671019 | None:intergenic | 30.0% |
!!! | GATTTTGATGATAGTTTGCT+CGG | - | chr2.4:23670014-23670033 | MS.gene95993:CDS | 30.0% |
AGATGTCTTTACTTCTGCAA+CGG | - | chr2.4:23671456-23671475 | MS.gene95993:CDS | 35.0% | |
ATGATGGTTCCATATTGCTA+TGG | + | chr2.4:23670510-23670529 | None:intergenic | 35.0% | |
ATTGCAGCGAAAAAGTGAAT+TGG | + | chr2.4:23670252-23670271 | None:intergenic | 35.0% | |
CCTAACAGATTTCTCTTATG+AGG | - | chr2.4:23670574-23670593 | MS.gene95993:CDS | 35.0% | |
CCTCATAAGAGAAATCTGTT+AGG | + | chr2.4:23670577-23670596 | None:intergenic | 35.0% | |
CTACGATTGGAATGAAATAC+AGG | + | chr2.4:23669929-23669948 | None:intergenic | 35.0% | |
GAAAAAGTGAATTGGAAGGA+AGG | + | chr2.4:23670244-23670263 | None:intergenic | 35.0% | |
TAAGTTAACCTTCCAAAGAC+AGG | + | chr2.4:23670924-23670943 | None:intergenic | 35.0% | |
TCTCAAACAAATCGATAACG+TGG | - | chr2.4:23670721-23670740 | MS.gene95993:intron | 35.0% | |
TGTTAAGAATAGGGGAATTG+TGG | + | chr2.4:23670992-23671011 | None:intergenic | 35.0% | |
TTGCAGTTGTTAGATACCTT+TGG | + | chr2.4:23671676-23671695 | None:intergenic | 35.0% | |
TTTCATTCCAATCGTAGACA+CGG | - | chr2.4:23669932-23669951 | MS.gene95993:CDS | 35.0% | |
!! | CAAGAAGATGGATTGATGTT+TGG | - | chr2.4:23669973-23669992 | MS.gene95993:CDS | 35.0% |
!! | GCATCGACTATAAACCTTAA+TGG | + | chr2.4:23670555-23670574 | None:intergenic | 35.0% |
CAGCGAAAAAGTGAATTGGA+AGG | + | chr2.4:23670248-23670267 | None:intergenic | 40.0% | |
CTAGCGTCTTATCAAGAAGA+TGG | - | chr2.4:23669961-23669980 | MS.gene95993:CDS | 40.0% | |
CTTCAAACACTTCGAGAATC+GGG | + | chr2.4:23670421-23670440 | None:intergenic | 40.0% | |
GCAGATACTCTCATTACCAA+AGG | - | chr2.4:23671657-23671676 | MS.gene95993:CDS | 40.0% | |
GCTTCAAACACTTCGAGAAT+CGG | + | chr2.4:23670422-23670441 | None:intergenic | 40.0% | |
TACCATGCCTTAAAACCTGT+AGG | + | chr2.4:23670881-23670900 | None:intergenic | 40.0% | |
! | TCCTTGTCCTACAGGTTTTA+AGG | - | chr2.4:23670871-23670890 | MS.gene95993:CDS | 40.0% |
! | TCGAAGTGTTTGAAGCTAGA+GGG | - | chr2.4:23670426-23670445 | MS.gene95993:intron | 40.0% |
!! | GTTGTTTTCATAGACTCTCG+AGG | - | chr2.4:23671218-23671237 | MS.gene95993:CDS | 40.0% |
AAGCTTGACTGAAAGCAGTG+AGG | + | chr2.4:23671484-23671503 | None:intergenic | 45.0% | |
CTGCAACTAAATGAGGTCAC+TGG | - | chr2.4:23670945-23670964 | MS.gene95993:CDS | 45.0% | |
GAACGAGCACGATCTTTGTT+TGG | - | chr2.4:23671534-23671553 | MS.gene95993:CDS | 45.0% | |
GCCTTAAAACCTGTAGGACA+AGG | + | chr2.4:23670875-23670894 | None:intergenic | 45.0% | |
TATGCAACGAAGACCCTTTC+TGG | + | chr2.4:23671363-23671382 | None:intergenic | 45.0% | |
TCACCAAGGGAAACAACAGT+AGG | - | chr2.4:23669855-23669874 | MS.gene95993:CDS | 45.0% | |
TTCACCAATCTGCCTGTCTT+TGG | - | chr2.4:23670909-23670928 | MS.gene95993:CDS | 45.0% | |
! | CTCGAAGTGTTTGAAGCTAG+AGG | - | chr2.4:23670425-23670444 | MS.gene95993:intron | 45.0% |
! | GGAGATGATGATGATATCGC+CGG | - | chr2.4:23671588-23671607 | MS.gene95993:CDS | 45.0% |
!! | TCTCCTACTGTTGTTTCCCT+TGG | + | chr2.4:23669861-23669880 | None:intergenic | 45.0% |
!!! | GTCCTACAGGTTTTAAGGCA+TGG | - | chr2.4:23670876-23670895 | MS.gene95993:CDS | 45.0% |
!!! | TGATGATATCGCCGGCTTTT+TGG | - | chr2.4:23671596-23671615 | MS.gene95993:CDS | 45.0% |
CCAATCTGCCTGTCTTTGGA+AGG | - | chr2.4:23670913-23670932 | MS.gene95993:CDS | 50.0% | |
CCTTCCAAAGACAGGCAGAT+TGG | + | chr2.4:23670916-23670935 | None:intergenic | 50.0% | |
GCATATCGCAGCCAAAAAGC+CGG | + | chr2.4:23671610-23671629 | None:intergenic | 50.0% | |
GTGCTAACCGTGTCTACGAT+TGG | + | chr2.4:23669942-23669961 | None:intergenic | 50.0% | |
GTTGGCAGATGCAGCAATCA+TGG | - | chr2.4:23671567-23671586 | MS.gene95993:CDS | 50.0% | |
! | TTGAAGCTAGAGGGTGCGAA+TGG | - | chr2.4:23670435-23670454 | MS.gene95993:intron | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 23669849 | 23671726 | 23669849 | ID=MS.gene95993 |
chr2.4 | mRNA | 23669849 | 23671726 | 23669849 | ID=MS.gene95993.t1;Parent=MS.gene95993 |
chr2.4 | exon | 23670806 | 23671726 | 23670806 | ID=MS.gene95993.t1.exon1;Parent=MS.gene95993.t1 |
chr2.4 | CDS | 23670806 | 23671726 | 23670806 | ID=cds.MS.gene95993.t1;Parent=MS.gene95993.t1 |
chr2.4 | exon | 23670547 | 23670690 | 23670547 | ID=MS.gene95993.t1.exon2;Parent=MS.gene95993.t1 |
chr2.4 | CDS | 23670547 | 23670690 | 23670547 | ID=cds.MS.gene95993.t1;Parent=MS.gene95993.t1 |
chr2.4 | exon | 23669849 | 23670139 | 23669849 | ID=MS.gene95993.t1.exon3;Parent=MS.gene95993.t1 |
chr2.4 | CDS | 23669849 | 23670139 | 23669849 | ID=cds.MS.gene95993.t1;Parent=MS.gene95993.t1 |
Gene Sequence |
Protein sequence |