Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74906.t1 | AFK41919.1 | 91.3 | 311 | 20 | 3 | 1 | 310 | 1 | 305 | 5.80E-120 | 440.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74906.t1 | Q8GWQ2 | 46.6 | 320 | 122 | 8 | 1 | 310 | 1 | 281 | 1.8e-53 | 211.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74906.t1 | G7I674 | 92.3 | 311 | 17 | 3 | 1 | 310 | 1 | 305 | 4.2e-120 | 440.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene74906 | -0.82449 | 7.85E-54 | -1.69E-46 |
MS.gene049171 | MS.gene74906 | -0.871445 | 6.80E-67 | -1.69E-46 |
MS.gene049217 | MS.gene74906 | -0.851482 | 8.63E-61 | -1.69E-46 |
MS.gene049222 | MS.gene74906 | -0.878432 | 2.82E-69 | -1.69E-46 |
MS.gene049232 | MS.gene74906 | -0.826991 | 2.00E-54 | -1.69E-46 |
MS.gene049281 | MS.gene74906 | 0.827323 | 1.67E-54 | -1.69E-46 |
MS.gene049285 | MS.gene74906 | -0.868946 | 4.47E-66 | -1.69E-46 |
MS.gene049320 | MS.gene74906 | -0.860094 | 2.62E-63 | -1.69E-46 |
MS.gene049609 | MS.gene74906 | -0.85436 | 1.30E-61 | -1.69E-46 |
MS.gene049611 | MS.gene74906 | 0.832034 | 1.19E-55 | -1.69E-46 |
MS.gene049633 | MS.gene74906 | -0.833897 | 4.09E-56 | -1.69E-46 |
MS.gene049805 | MS.gene74906 | -0.838455 | 2.85E-57 | -1.69E-46 |
MS.gene05010 | MS.gene74906 | -0.830925 | 2.23E-55 | -1.69E-46 |
MS.gene050163 | MS.gene74906 | -0.838382 | 2.97E-57 | -1.69E-46 |
MS.gene050165 | MS.gene74906 | -0.832607 | 8.58E-56 | -1.69E-46 |
MS.gene050170 | MS.gene74906 | -0.845568 | 3.75E-59 | -1.69E-46 |
MS.gene050216 | MS.gene74906 | -0.807855 | 4.12E-50 | -1.69E-46 |
MS.gene050323 | MS.gene74906 | -0.861621 | 9.02E-64 | -1.69E-46 |
MS.gene050333 | MS.gene74906 | -0.833257 | 5.92E-56 | -1.69E-46 |
MS.gene050380 | MS.gene74906 | 0.819473 | 1.14E-52 | -1.69E-46 |
MS.gene050381 | MS.gene74906 | 0.848065 | 7.77E-60 | -1.69E-46 |
MS.gene050444 | MS.gene74906 | -0.809832 | 1.56E-50 | -1.69E-46 |
MS.gene050496 | MS.gene74906 | -0.849495 | 3.12E-60 | -1.69E-46 |
MS.gene050504 | MS.gene74906 | -0.863827 | 1.89E-64 | -1.69E-46 |
MS.gene050518 | MS.gene74906 | -0.825636 | 4.21E-54 | -1.69E-46 |
MS.gene050538 | MS.gene74906 | -0.841545 | 4.45E-58 | -1.69E-46 |
MS.gene050577 | MS.gene74906 | -0.850002 | 2.25E-60 | -1.69E-46 |
MS.gene050593 | MS.gene74906 | -0.820412 | 6.95E-53 | -1.69E-46 |
MS.gene050612 | MS.gene74906 | -0.862465 | 4.97E-64 | -1.69E-46 |
MS.gene050647 | MS.gene74906 | 0.807984 | 3.87E-50 | -1.69E-46 |
MS.gene050675 | MS.gene74906 | -0.852714 | 3.85E-61 | -1.69E-46 |
MS.gene050699 | MS.gene74906 | -0.865755 | 4.69E-65 | -1.69E-46 |
MS.gene050747 | MS.gene74906 | -0.867281 | 1.54E-65 | -1.69E-46 |
MS.gene050772 | MS.gene74906 | -0.869902 | 2.18E-66 | -1.69E-46 |
MS.gene050800 | MS.gene74906 | 0.807145 | 5.83E-50 | -1.69E-46 |
MS.gene050809 | MS.gene74906 | 0.815251 | 1.02E-51 | -1.69E-46 |
MS.gene05080 | MS.gene74906 | -0.841201 | 5.49E-58 | -1.69E-46 |
MS.gene05081 | MS.gene74906 | -0.819754 | 9.84E-53 | -1.69E-46 |
MS.gene050868 | MS.gene74906 | -0.851446 | 8.83E-61 | -1.69E-46 |
MS.gene050871 | MS.gene74906 | -0.849555 | 3.00E-60 | -1.69E-46 |
MS.gene050883 | MS.gene74906 | 0.817335 | 3.48E-52 | -1.69E-46 |
MS.gene050950 | MS.gene74906 | -0.859308 | 4.53E-63 | -1.69E-46 |
MS.gene050986 | MS.gene74906 | -0.832926 | 7.15E-56 | -1.69E-46 |
MS.gene05100 | MS.gene74906 | -0.826513 | 2.60E-54 | -1.69E-46 |
MS.gene051044 | MS.gene74906 | 0.806828 | 6.81E-50 | -1.69E-46 |
MS.gene05104 | MS.gene74906 | 0.842903 | 1.95E-58 | -1.69E-46 |
MS.gene051113 | MS.gene74906 | 0.809849 | 1.54E-50 | -1.69E-46 |
MS.gene051127 | MS.gene74906 | 0.809129 | 2.20E-50 | -1.69E-46 |
MS.gene051138 | MS.gene74906 | 0.803787 | 2.95E-49 | -1.69E-46 |
MS.gene051167 | MS.gene74906 | 0.832329 | 1.01E-55 | -1.69E-46 |
MS.gene051268 | MS.gene74906 | -0.807505 | 4.89E-50 | -1.69E-46 |
MS.gene051317 | MS.gene74906 | -0.826643 | 2.42E-54 | -1.69E-46 |
MS.gene051364 | MS.gene74906 | 0.837711 | 4.42E-57 | -1.69E-46 |
MS.gene051366 | MS.gene74906 | 0.827216 | 1.77E-54 | -1.69E-46 |
MS.gene051387 | MS.gene74906 | -0.80985 | 1.54E-50 | -1.69E-46 |
MS.gene051551 | MS.gene74906 | -0.818088 | 2.35E-52 | -1.69E-46 |
MS.gene051632 | MS.gene74906 | 0.825401 | 4.78E-54 | -1.69E-46 |
MS.gene051651 | MS.gene74906 | 0.808288 | 3.33E-50 | -1.69E-46 |
MS.gene051666 | MS.gene74906 | -0.822846 | 1.90E-53 | -1.69E-46 |
MS.gene051694 | MS.gene74906 | -0.835215 | 1.91E-56 | -1.69E-46 |
MS.gene051810 | MS.gene74906 | -0.823842 | 1.11E-53 | -1.69E-46 |
MS.gene051838 | MS.gene74906 | -0.852169 | 5.51E-61 | -1.69E-46 |
MS.gene051858 | MS.gene74906 | -0.827773 | 1.30E-54 | -1.69E-46 |
MS.gene051949 | MS.gene74906 | -0.805414 | 1.35E-49 | -1.69E-46 |
MS.gene052164 | MS.gene74906 | -0.852326 | 4.97E-61 | -1.69E-46 |
MS.gene05234 | MS.gene74906 | 0.826019 | 3.41E-54 | -1.69E-46 |
MS.gene05240 | MS.gene74906 | 0.826673 | 2.38E-54 | -1.69E-46 |
MS.gene052482 | MS.gene74906 | -0.841247 | 5.34E-58 | -1.69E-46 |
MS.gene052486 | MS.gene74906 | -0.848796 | 4.88E-60 | -1.69E-46 |
MS.gene052501 | MS.gene74906 | -0.810902 | 9.15E-51 | -1.69E-46 |
MS.gene052503 | MS.gene74906 | -0.854389 | 1.27E-61 | -1.69E-46 |
MS.gene052506 | MS.gene74906 | -0.839136 | 1.90E-57 | -1.69E-46 |
MS.gene052615 | MS.gene74906 | -0.859182 | 4.94E-63 | -1.69E-46 |
MS.gene052822 | MS.gene74906 | -0.836658 | 8.22E-57 | -1.69E-46 |
MS.gene052823 | MS.gene74906 | -0.85473 | 1.01E-61 | -1.69E-46 |
MS.gene052825 | MS.gene74906 | -0.855359 | 6.65E-62 | -1.69E-46 |
MS.gene052870 | MS.gene74906 | -0.801171 | 1.02E-48 | -1.69E-46 |
MS.gene052872 | MS.gene74906 | -0.819005 | 1.46E-52 | -1.69E-46 |
MS.gene052916 | MS.gene74906 | -0.833619 | 4.81E-56 | -1.69E-46 |
MS.gene052966 | MS.gene74906 | -0.826374 | 2.81E-54 | -1.69E-46 |
MS.gene053117 | MS.gene74906 | -0.807463 | 4.99E-50 | -1.69E-46 |
MS.gene053203 | MS.gene74906 | -0.873635 | 1.26E-67 | -1.69E-46 |
MS.gene053207 | MS.gene74906 | -0.820588 | 6.34E-53 | -1.69E-46 |
MS.gene053213 | MS.gene74906 | -0.860712 | 1.71E-63 | -1.69E-46 |
MS.gene053286 | MS.gene74906 | -0.856697 | 2.70E-62 | -1.69E-46 |
MS.gene053420 | MS.gene74906 | 0.858189 | 9.77E-63 | -1.69E-46 |
MS.gene053421 | MS.gene74906 | 0.853292 | 2.63E-61 | -1.69E-46 |
MS.gene053436 | MS.gene74906 | -0.865905 | 4.21E-65 | -1.69E-46 |
MS.gene053479 | MS.gene74906 | -0.840412 | 8.83E-58 | -1.69E-46 |
MS.gene053480 | MS.gene74906 | -0.82171 | 3.49E-53 | -1.69E-46 |
MS.gene053574 | MS.gene74906 | -0.854518 | 1.17E-61 | -1.69E-46 |
MS.gene053579 | MS.gene74906 | -0.806336 | 8.65E-50 | -1.69E-46 |
MS.gene053626 | MS.gene74906 | -0.809872 | 1.53E-50 | -1.69E-46 |
MS.gene053632 | MS.gene74906 | -0.853136 | 2.92E-61 | -1.69E-46 |
MS.gene053776 | MS.gene74906 | 0.805484 | 1.31E-49 | -1.69E-46 |
MS.gene053824 | MS.gene74906 | -0.858569 | 7.53E-63 | -1.69E-46 |
MS.gene053916 | MS.gene74906 | -0.832617 | 8.53E-56 | -1.69E-46 |
MS.gene054003 | MS.gene74906 | -0.807024 | 6.19E-50 | -1.69E-46 |
MS.gene054408 | MS.gene74906 | -0.82377 | 1.16E-53 | -1.69E-46 |
MS.gene054595 | MS.gene74906 | -0.859193 | 4.90E-63 | -1.69E-46 |
MS.gene054600 | MS.gene74906 | -0.837341 | 5.50E-57 | -1.69E-46 |
MS.gene054642 | MS.gene74906 | -0.863878 | 1.82E-64 | -1.69E-46 |
MS.gene054706 | MS.gene74906 | 0.880944 | 3.61E-70 | -1.69E-46 |
MS.gene054707 | MS.gene74906 | 0.839672 | 1.38E-57 | -1.69E-46 |
MS.gene054708 | MS.gene74906 | 0.814474 | 1.51E-51 | -1.69E-46 |
MS.gene05470 | MS.gene74906 | -0.840382 | 9.00E-58 | -1.69E-46 |
MS.gene054742 | MS.gene74906 | 0.81013 | 1.34E-50 | -1.69E-46 |
MS.gene054927 | MS.gene74906 | -0.815222 | 1.03E-51 | -1.69E-46 |
MS.gene05494 | MS.gene74906 | -0.807063 | 6.07E-50 | -1.69E-46 |
MS.gene054954 | MS.gene74906 | -0.86092 | 1.47E-63 | -1.69E-46 |
MS.gene054959 | MS.gene74906 | 0.82693 | 2.07E-54 | -1.69E-46 |
MS.gene05505 | MS.gene74906 | -0.809397 | 1.93E-50 | -1.69E-46 |
MS.gene055154 | MS.gene74906 | 0.849229 | 3.70E-60 | -1.69E-46 |
MS.gene055202 | MS.gene74906 | 0.806234 | 9.08E-50 | -1.69E-46 |
MS.gene055206 | MS.gene74906 | -0.850214 | 1.96E-60 | -1.69E-46 |
MS.gene055224 | MS.gene74906 | -0.819328 | 1.23E-52 | -1.69E-46 |
MS.gene055289 | MS.gene74906 | -0.829413 | 5.22E-55 | -1.69E-46 |
MS.gene055362 | MS.gene74906 | -0.869461 | 3.04E-66 | -1.69E-46 |
MS.gene055502 | MS.gene74906 | -0.887501 | 1.35E-72 | -1.69E-46 |
MS.gene055577 | MS.gene74906 | -0.878671 | 2.32E-69 | -1.69E-46 |
MS.gene055722 | MS.gene74906 | -0.814187 | 1.75E-51 | -1.69E-46 |
MS.gene055748 | MS.gene74906 | -0.833792 | 4.35E-56 | -1.69E-46 |
MS.gene055750 | MS.gene74906 | -0.832467 | 9.30E-56 | -1.69E-46 |
MS.gene055751 | MS.gene74906 | -0.826735 | 2.30E-54 | -1.69E-46 |
MS.gene05589 | MS.gene74906 | -0.85122 | 1.02E-60 | -1.69E-46 |
MS.gene055941 | MS.gene74906 | -0.842829 | 2.04E-58 | -1.69E-46 |
MS.gene056046 | MS.gene74906 | -0.818514 | 1.88E-52 | -1.69E-46 |
MS.gene056083 | MS.gene74906 | -0.810767 | 9.79E-51 | -1.69E-46 |
MS.gene056198 | MS.gene74906 | 0.800612 | 1.33E-48 | -1.69E-46 |
MS.gene056224 | MS.gene74906 | 0.805093 | 1.58E-49 | -1.69E-46 |
MS.gene056374 | MS.gene74906 | -0.80453 | 2.07E-49 | -1.69E-46 |
MS.gene056387 | MS.gene74906 | -0.811964 | 5.38E-51 | -1.69E-46 |
MS.gene056409 | MS.gene74906 | -0.805733 | 1.16E-49 | -1.69E-46 |
MS.gene056448 | MS.gene74906 | -0.817169 | 3.79E-52 | -1.69E-46 |
MS.gene056487 | MS.gene74906 | -0.822847 | 1.90E-53 | -1.69E-46 |
MS.gene056504 | MS.gene74906 | -0.875131 | 3.92E-68 | -1.69E-46 |
MS.gene056510 | MS.gene74906 | -0.843765 | 1.15E-58 | -1.69E-46 |
MS.gene056550 | MS.gene74906 | 0.804114 | 2.52E-49 | -1.69E-46 |
MS.gene056590 | MS.gene74906 | 0.829364 | 5.37E-55 | -1.69E-46 |
MS.gene056591 | MS.gene74906 | 0.829954 | 3.85E-55 | -1.69E-46 |
MS.gene056610 | MS.gene74906 | -0.811287 | 7.55E-51 | -1.69E-46 |
MS.gene056657 | MS.gene74906 | -0.871545 | 6.30E-67 | -1.69E-46 |
MS.gene056688 | MS.gene74906 | 0.802316 | 5.95E-49 | -1.69E-46 |
MS.gene056692 | MS.gene74906 | -0.85477 | 9.86E-62 | -1.69E-46 |
MS.gene056856 | MS.gene74906 | 0.821167 | 4.66E-53 | -1.69E-46 |
MS.gene056946 | MS.gene74906 | -0.803055 | 4.18E-49 | -1.69E-46 |
MS.gene057014 | MS.gene74906 | 0.801962 | 7.03E-49 | -1.69E-46 |
MS.gene057076 | MS.gene74906 | -0.811071 | 8.41E-51 | -1.69E-46 |
MS.gene057086 | MS.gene74906 | -0.81422 | 1.72E-51 | -1.69E-46 |
MS.gene057261 | MS.gene74906 | 0.808481 | 3.03E-50 | -1.69E-46 |
MS.gene057331 | MS.gene74906 | -0.800529 | 1.38E-48 | -1.69E-46 |
MS.gene057416 | MS.gene74906 | -0.852891 | 3.43E-61 | -1.69E-46 |
MS.gene057658 | MS.gene74906 | -0.847289 | 1.27E-59 | -1.69E-46 |
MS.gene057831 | MS.gene74906 | -0.851815 | 6.94E-61 | -1.69E-46 |
MS.gene05787 | MS.gene74906 | -0.804367 | 2.23E-49 | -1.69E-46 |
MS.gene058019 | MS.gene74906 | -0.817742 | 2.82E-52 | -1.69E-46 |
MS.gene058067 | MS.gene74906 | 0.800924 | 1.15E-48 | -1.69E-46 |
MS.gene058068 | MS.gene74906 | 0.808329 | 3.27E-50 | -1.69E-46 |
MS.gene058099 | MS.gene74906 | 0.820468 | 6.75E-53 | -1.69E-46 |
MS.gene058111 | MS.gene74906 | 0.80655 | 7.79E-50 | -1.69E-46 |
MS.gene058117 | MS.gene74906 | 0.801352 | 9.38E-49 | -1.69E-46 |
MS.gene058130 | MS.gene74906 | -0.806391 | 8.41E-50 | -1.69E-46 |
MS.gene058157 | MS.gene74906 | -0.853855 | 1.81E-61 | -1.69E-46 |
MS.gene058171 | MS.gene74906 | 0.803485 | 3.41E-49 | -1.69E-46 |
MS.gene058175 | MS.gene74906 | 0.802422 | 5.65E-49 | -1.69E-46 |
MS.gene058268 | MS.gene74906 | 0.834895 | 2.30E-56 | -1.69E-46 |
MS.gene058269 | MS.gene74906 | 0.833209 | 6.08E-56 | -1.69E-46 |
MS.gene058334 | MS.gene74906 | 0.820348 | 7.19E-53 | -1.69E-46 |
MS.gene058338 | MS.gene74906 | -0.842599 | 2.34E-58 | -1.69E-46 |
MS.gene05837 | MS.gene74906 | -0.863265 | 2.82E-64 | -1.69E-46 |
MS.gene058382 | MS.gene74906 | 0.812778 | 3.57E-51 | -1.69E-46 |
MS.gene058419 | MS.gene74906 | -0.866649 | 2.44E-65 | -1.69E-46 |
MS.gene058544 | MS.gene74906 | -0.878032 | 3.90E-69 | -1.69E-46 |
MS.gene058603 | MS.gene74906 | 0.825656 | 4.16E-54 | -1.69E-46 |
MS.gene058723 | MS.gene74906 | -0.82323 | 1.55E-53 | -1.69E-46 |
MS.gene058773 | MS.gene74906 | -0.84225 | 2.90E-58 | -1.69E-46 |
MS.gene058838 | MS.gene74906 | -0.871328 | 7.43E-67 | -1.69E-46 |
MS.gene05883 | MS.gene74906 | -0.843088 | 1.74E-58 | -1.69E-46 |
MS.gene058840 | MS.gene74906 | 0.80121 | 1.00E-48 | -1.69E-46 |
MS.gene059022 | MS.gene74906 | -0.864488 | 1.17E-64 | -1.69E-46 |
MS.gene059023 | MS.gene74906 | -0.881046 | 3.32E-70 | -1.69E-46 |
MS.gene05913 | MS.gene74906 | -0.810904 | 9.14E-51 | -1.69E-46 |
MS.gene05914 | MS.gene74906 | -0.820386 | 7.05E-53 | -1.69E-46 |
MS.gene05934 | MS.gene74906 | -0.825579 | 4.34E-54 | -1.69E-46 |
MS.gene059367 | MS.gene74906 | -0.833537 | 5.04E-56 | -1.69E-46 |
MS.gene059536 | MS.gene74906 | -0.809432 | 1.90E-50 | -1.69E-46 |
MS.gene059667 | MS.gene74906 | -0.829539 | 4.87E-55 | -1.69E-46 |
MS.gene059677 | MS.gene74906 | -0.87235 | 3.40E-67 | -1.69E-46 |
MS.gene059699 | MS.gene74906 | 0.82181 | 3.31E-53 | -1.69E-46 |
MS.gene059703 | MS.gene74906 | 0.827494 | 1.52E-54 | -1.69E-46 |
MS.gene059718 | MS.gene74906 | -0.878682 | 2.30E-69 | -1.69E-46 |
MS.gene059756 | MS.gene74906 | -0.846254 | 2.44E-59 | -1.69E-46 |
MS.gene059801 | MS.gene74906 | -0.827415 | 1.58E-54 | -1.69E-46 |
MS.gene059865 | MS.gene74906 | -0.847479 | 1.13E-59 | -1.69E-46 |
MS.gene059902 | MS.gene74906 | -0.826093 | 3.28E-54 | -1.69E-46 |
MS.gene059953 | MS.gene74906 | 0.817725 | 2.84E-52 | -1.69E-46 |
MS.gene059955 | MS.gene74906 | 0.81973 | 9.96E-53 | -1.69E-46 |
MS.gene06000 | MS.gene74906 | -0.814862 | 1.24E-51 | -1.69E-46 |
MS.gene060405 | MS.gene74906 | 0.804555 | 2.04E-49 | -1.69E-46 |
MS.gene060482 | MS.gene74906 | -0.850214 | 1.96E-60 | -1.69E-46 |
MS.gene060703 | MS.gene74906 | -0.814429 | 1.55E-51 | -1.69E-46 |
MS.gene060762 | MS.gene74906 | -0.859079 | 5.30E-63 | -1.69E-46 |
MS.gene060778 | MS.gene74906 | -0.839179 | 1.85E-57 | -1.69E-46 |
MS.gene06077 | MS.gene74906 | -0.872056 | 4.26E-67 | -1.69E-46 |
MS.gene060804 | MS.gene74906 | -0.802501 | 5.44E-49 | -1.69E-46 |
MS.gene060823 | MS.gene74906 | 0.814343 | 1.62E-51 | -1.69E-46 |
MS.gene060835 | MS.gene74906 | -0.832929 | 7.14E-56 | -1.69E-46 |
MS.gene06092 | MS.gene74906 | -0.850744 | 1.39E-60 | -1.69E-46 |
MS.gene060982 | MS.gene74906 | -0.854009 | 1.64E-61 | -1.69E-46 |
MS.gene061041 | MS.gene74906 | -0.807568 | 4.74E-50 | -1.69E-46 |
MS.gene061150 | MS.gene74906 | -0.864623 | 1.06E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74906.t1 | MTR_1g079810 | 96.785 | 311 | 3 | 3 | 1 | 310 | 1 | 305 | 0.0 | 590 |
MS.gene74906.t1 | MTR_1g073860 | 52.000 | 325 | 106 | 10 | 1 | 310 | 33 | 322 | 4.25e-75 | 233 |
MS.gene74906.t1 | MTR_1g044155 | 64.159 | 226 | 75 | 5 | 1 | 225 | 55 | 275 | 4.35e-75 | 234 |
MS.gene74906.t1 | MTR_5g091630 | 62.963 | 162 | 60 | 0 | 74 | 235 | 45 | 206 | 2.79e-63 | 201 |
MS.gene74906.t1 | MTR_5g011520 | 62.434 | 189 | 71 | 0 | 41 | 229 | 65 | 253 | 5.19e-63 | 202 |
MS.gene74906.t1 | MTR_8g036060 | 71.084 | 166 | 48 | 0 | 76 | 241 | 86 | 251 | 4.43e-62 | 199 |
MS.gene74906.t1 | MTR_3g068035 | 66.667 | 153 | 45 | 1 | 86 | 238 | 89 | 235 | 6.49e-60 | 194 |
MS.gene74906.t1 | MTR_7g080980 | 62.500 | 152 | 57 | 0 | 85 | 236 | 66 | 217 | 2.88e-56 | 183 |
MS.gene74906.t1 | MTR_4g098450 | 63.087 | 149 | 55 | 0 | 83 | 231 | 83 | 231 | 1.47e-52 | 174 |
MS.gene74906.t1 | MTR_3g100470 | 43.049 | 223 | 117 | 5 | 24 | 242 | 26 | 242 | 1.23e-51 | 172 |
MS.gene74906.t1 | MTR_5g080580 | 60.452 | 177 | 68 | 1 | 49 | 225 | 64 | 238 | 4.43e-51 | 171 |
MS.gene74906.t1 | MTR_5g066020 | 43.103 | 174 | 89 | 4 | 85 | 253 | 60 | 228 | 4.27e-39 | 138 |
MS.gene74906.t1 | MTR_5g089600 | 33.951 | 162 | 96 | 3 | 73 | 223 | 74 | 235 | 1.79e-24 | 99.4 |
MS.gene74906.t1 | MTR_4g057487 | 32.941 | 170 | 104 | 2 | 73 | 232 | 14 | 183 | 3.57e-24 | 98.6 |
MS.gene74906.t1 | MTR_5g010330 | 36.207 | 174 | 98 | 5 | 71 | 232 | 99 | 271 | 3.39e-23 | 97.8 |
MS.gene74906.t1 | MTR_1g079780 | 41.912 | 136 | 75 | 2 | 85 | 216 | 88 | 223 | 9.77e-23 | 96.7 |
MS.gene74906.t1 | MTR_4g057525 | 31.176 | 170 | 107 | 2 | 69 | 228 | 29 | 198 | 2.20e-21 | 91.3 |
MS.gene74906.t1 | MTR_7g116320 | 46.903 | 113 | 60 | 0 | 103 | 215 | 143 | 255 | 2.00e-20 | 90.9 |
MS.gene74906.t1 | MTR_1g073870 | 43.791 | 153 | 39 | 4 | 71 | 223 | 47 | 152 | 2.02e-20 | 88.2 |
MS.gene74906.t1 | MTR_1g053685 | 30.952 | 168 | 107 | 1 | 73 | 231 | 82 | 249 | 5.84e-20 | 88.2 |
MS.gene74906.t1 | MTR_1g061530 | 44.348 | 115 | 58 | 3 | 106 | 215 | 144 | 257 | 1.47e-19 | 88.2 |
MS.gene74906.t1 | MTR_7g116320 | 44.800 | 125 | 65 | 1 | 103 | 223 | 143 | 267 | 2.00e-19 | 86.7 |
MS.gene74906.t1 | MTR_1g032910 | 32.203 | 177 | 104 | 4 | 70 | 232 | 95 | 269 | 4.87e-19 | 85.9 |
MS.gene74906.t1 | MTR_6g061670 | 39.655 | 116 | 67 | 1 | 103 | 215 | 130 | 245 | 2.69e-18 | 84.0 |
MS.gene74906.t1 | MTR_7g077120 | 37.297 | 185 | 97 | 5 | 68 | 236 | 119 | 300 | 2.94e-18 | 84.3 |
MS.gene74906.t1 | MTR_6g061670 | 39.655 | 116 | 67 | 1 | 103 | 215 | 125 | 240 | 3.62e-18 | 83.6 |
MS.gene74906.t1 | MTR_5g089700 | 30.128 | 156 | 100 | 3 | 74 | 220 | 73 | 228 | 7.37e-17 | 78.6 |
MS.gene74906.t1 | MTR_5g089090 | 32.515 | 163 | 98 | 2 | 69 | 222 | 21 | 180 | 9.85e-17 | 77.8 |
MS.gene74906.t1 | MTR_1g076710 | 41.379 | 116 | 64 | 2 | 103 | 215 | 134 | 248 | 8.03e-16 | 77.4 |
MS.gene74906.t1 | MTR_8g036160 | 41.228 | 114 | 63 | 1 | 106 | 215 | 145 | 258 | 1.78e-15 | 76.3 |
MS.gene74906.t1 | MTR_4g055813 | 35.156 | 128 | 81 | 2 | 102 | 227 | 18 | 145 | 2.02e-15 | 75.5 |
MS.gene74906.t1 | MTR_4g055803 | 37.008 | 127 | 68 | 3 | 106 | 223 | 128 | 251 | 6.82e-15 | 75.1 |
MS.gene74906.t1 | MTR_8g098390 | 32.000 | 150 | 91 | 4 | 94 | 234 | 157 | 304 | 1.11e-14 | 73.9 |
MS.gene74906.t1 | MTR_7g074935 | 47.761 | 67 | 35 | 0 | 106 | 172 | 130 | 196 | 1.34e-14 | 73.6 |
MS.gene74906.t1 | MTR_4g098460 | 33.553 | 152 | 76 | 5 | 76 | 215 | 57 | 195 | 1.47e-14 | 72.8 |
MS.gene74906.t1 | MTR_8g031100 | 37.576 | 165 | 95 | 3 | 76 | 232 | 125 | 289 | 2.88e-14 | 72.8 |
MS.gene74906.t1 | MTR_4g069110 | 36.842 | 95 | 60 | 0 | 74 | 168 | 32 | 126 | 7.01e-14 | 68.9 |
MS.gene74906.t1 | MTR_8g078930 | 32.593 | 135 | 81 | 3 | 107 | 232 | 5 | 138 | 1.22e-13 | 68.2 |
MS.gene74906.t1 | MTR_4g055833 | 38.211 | 123 | 64 | 3 | 102 | 215 | 121 | 240 | 1.82e-13 | 70.5 |
MS.gene74906.t1 | MTR_5g011620 | 33.945 | 109 | 70 | 1 | 107 | 215 | 119 | 225 | 3.53e-13 | 70.5 |
MS.gene74906.t1 | MTR_5g011610 | 33.333 | 117 | 75 | 2 | 107 | 222 | 62 | 176 | 1.47e-12 | 67.8 |
MS.gene74906.t1 | MTR_4g098460 | 32.484 | 157 | 76 | 6 | 76 | 215 | 57 | 200 | 1.97e-12 | 67.0 |
MS.gene74906.t1 | MTR_5g011680 | 32.258 | 124 | 77 | 2 | 106 | 222 | 145 | 268 | 5.45e-12 | 65.5 |
MS.gene74906.t1 | MTR_4g101990 | 40.299 | 67 | 40 | 0 | 106 | 172 | 147 | 213 | 2.25e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74906.t1 | AT3G04570 | 61.603 | 237 | 79 | 3 | 1 | 225 | 1 | 237 | 3.76e-79 | 243 |
MS.gene74906.t1 | AT4G14465 | 50.313 | 320 | 110 | 10 | 1 | 310 | 1 | 281 | 6.21e-79 | 241 |
MS.gene74906.t1 | AT2G35270 | 64.744 | 156 | 55 | 0 | 76 | 231 | 78 | 233 | 2.11e-62 | 199 |
MS.gene74906.t1 | AT2G42940 | 61.078 | 167 | 60 | 1 | 76 | 237 | 53 | 219 | 1.49e-60 | 194 |
MS.gene74906.t1 | AT3G60870 | 60.927 | 151 | 57 | 1 | 70 | 220 | 53 | 201 | 7.85e-58 | 187 |
MS.gene74906.t1 | AT2G45430 | 67.251 | 171 | 51 | 3 | 72 | 238 | 85 | 254 | 1.69e-57 | 188 |
MS.gene74906.t1 | AT4G22810 | 58.763 | 194 | 77 | 1 | 41 | 231 | 70 | 263 | 6.47e-57 | 187 |
MS.gene74906.t1 | AT4G12050 | 58.854 | 192 | 78 | 1 | 41 | 231 | 83 | 274 | 9.57e-57 | 187 |
MS.gene74906.t1 | AT3G55560 | 43.849 | 317 | 145 | 10 | 1 | 301 | 1 | 300 | 9.56e-53 | 175 |
MS.gene74906.t1 | AT4G17800 | 63.226 | 155 | 56 | 1 | 85 | 239 | 91 | 244 | 2.97e-51 | 171 |
MS.gene74906.t1 | AT4G35390 | 57.297 | 185 | 76 | 2 | 42 | 223 | 28 | 212 | 6.65e-50 | 167 |
MS.gene74906.t1 | AT5G49700 | 46.512 | 172 | 82 | 3 | 75 | 239 | 55 | 223 | 1.05e-49 | 166 |
MS.gene74906.t1 | AT1G20900 | 55.497 | 191 | 70 | 2 | 50 | 225 | 54 | 244 | 9.86e-49 | 165 |
MS.gene74906.t1 | AT1G14490 | 42.857 | 182 | 88 | 4 | 77 | 244 | 6 | 185 | 2.84e-39 | 137 |
MS.gene74906.t1 | AT1G14490 | 42.857 | 182 | 88 | 4 | 77 | 244 | 25 | 204 | 4.14e-39 | 137 |
MS.gene74906.t1 | AT4G25320 | 44.248 | 113 | 60 | 1 | 106 | 215 | 169 | 281 | 1.63e-21 | 94.4 |
MS.gene74906.t1 | AT5G51590 | 43.363 | 113 | 61 | 1 | 106 | 215 | 181 | 293 | 2.03e-21 | 94.0 |
MS.gene74906.t1 | AT5G62260 | 39.516 | 124 | 72 | 1 | 103 | 223 | 160 | 283 | 2.45e-21 | 92.0 |
MS.gene74906.t1 | AT1G63470 | 39.726 | 146 | 81 | 3 | 76 | 215 | 147 | 291 | 4.28e-21 | 92.8 |
MS.gene74906.t1 | AT4G12080 | 41.739 | 115 | 60 | 2 | 106 | 215 | 173 | 285 | 5.73e-21 | 92.0 |
MS.gene74906.t1 | AT3G04590 | 32.093 | 215 | 116 | 5 | 106 | 308 | 174 | 370 | 9.13e-21 | 92.0 |
MS.gene74906.t1 | AT5G62260 | 40.517 | 116 | 66 | 1 | 103 | 215 | 160 | 275 | 4.68e-20 | 90.1 |
MS.gene74906.t1 | AT5G62260 | 40.517 | 116 | 66 | 1 | 103 | 215 | 160 | 275 | 4.68e-20 | 90.1 |
MS.gene74906.t1 | AT3G04590 | 40.000 | 110 | 66 | 0 | 106 | 215 | 174 | 283 | 5.87e-20 | 88.6 |
MS.gene74906.t1 | AT2G45850 | 35.948 | 153 | 92 | 3 | 69 | 215 | 125 | 277 | 1.99e-19 | 87.8 |
MS.gene74906.t1 | AT2G45850 | 35.948 | 153 | 92 | 3 | 69 | 215 | 125 | 277 | 1.99e-19 | 87.8 |
MS.gene74906.t1 | AT2G45850 | 36.364 | 154 | 92 | 3 | 69 | 216 | 125 | 278 | 4.48e-19 | 85.5 |
MS.gene74906.t1 | AT4G17950 | 40.690 | 145 | 79 | 3 | 76 | 215 | 196 | 338 | 1.67e-18 | 85.9 |
MS.gene74906.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene74906.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene74906.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene74906.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 77 | 215 | 138 | 278 | 4.76e-18 | 84.0 |
MS.gene74906.t1 | AT4G00200 | 39.850 | 133 | 66 | 2 | 106 | 235 | 126 | 247 | 1.58e-14 | 73.2 |
MS.gene74906.t1 | AT4G00200 | 39.850 | 133 | 66 | 2 | 106 | 235 | 126 | 247 | 1.58e-14 | 73.2 |
MS.gene74906.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 130 | 274 | 4.66e-14 | 72.4 |
MS.gene74906.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 130 | 274 | 4.66e-14 | 72.4 |
MS.gene74906.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene74906.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene74906.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene74906.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene74906.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 76 | 215 | 124 | 268 | 5.29e-14 | 72.0 |
MS.gene74906.t1 | AT5G46640 | 43.299 | 97 | 53 | 1 | 75 | 171 | 154 | 248 | 2.60e-13 | 70.1 |
MS.gene74906.t1 | AT3G61310 | 34.459 | 148 | 91 | 3 | 74 | 215 | 132 | 279 | 2.82e-12 | 67.0 |
MS.gene74906.t1 | AT4G22770 | 39.823 | 113 | 65 | 1 | 106 | 215 | 153 | 265 | 3.81e-12 | 66.6 |
MS.gene74906.t1 | AT4G22770 | 39.823 | 113 | 65 | 1 | 106 | 215 | 153 | 265 | 3.81e-12 | 66.6 |
Find 121 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGACTATTTATCTTTC+TGG | 0.085538 | 1.4:-64883199 | MS.gene74906:CDS |
GGAGCTATGGTGGCGCTTCC+TGG | 0.123030 | 1.4:-64883286 | MS.gene74906:CDS |
TAACAATGTTGGTGGTAATT+TGG | 0.176970 | 1.4:-64882924 | MS.gene74906:CDS |
GGGCATCAAGGTGGTGGTGG+TGG | 0.274335 | 1.4:-64883043 | MS.gene74906:CDS |
GTTAATTAGTATACTTAGTA+TGG | 0.281421 | 1.4:+64882815 | None:intergenic |
CATCAAGGTGGTGGTGGTGG+TGG | 0.310580 | 1.4:-64883040 | MS.gene74906:CDS |
TGTTACAGCACTTTGGTTCA+TGG | 0.311013 | 1.4:+64883645 | None:intergenic |
AACCTGATGGACGGCCTCTT+GGG | 0.312471 | 1.4:+64883509 | None:intergenic |
GTTATGAATATCGGTGGTTT+TGG | 0.313396 | 1.4:+64883475 | None:intergenic |
GGCCGGGCCGGTTATGTTGA+TGG | 0.324168 | 1.4:-64883128 | MS.gene74906:CDS |
TCCACTAGGAAAACCGGATC+TGG | 0.327318 | 1.4:-64883674 | MS.gene74906:CDS |
GAACCTGATGGACGGCCTCT+TGG | 0.345631 | 1.4:+64883508 | None:intergenic |
ACATGGCTTCGTAGCGCGTT+AGG | 0.352279 | 1.4:+64883442 | None:intergenic |
TTGACCGGTTCAGTGCTTCC+TGG | 0.357484 | 1.4:-64883244 | MS.gene74906:CDS |
AACAATGTTGGTGGTAATTT+GGG | 0.370360 | 1.4:-64882923 | MS.gene74906:CDS |
CCTTCACCGCCGGGAGCTAC+TGG | 0.381049 | 1.4:-64883220 | MS.gene74906:CDS |
GGTAATTTGGGTGTTTCAAA+TGG | 0.389870 | 1.4:-64882911 | MS.gene74906:CDS |
CTATCTCTTGTTATGAATAT+CGG | 0.390991 | 1.4:+64883466 | None:intergenic |
TCCACTTGTGGCGGCCGGGC+CGG | 0.400817 | 1.4:-64883140 | MS.gene74906:CDS |
GTTGGTCCACTTGTGGCGGC+CGG | 0.404963 | 1.4:-64883145 | MS.gene74906:CDS |
ATGAACCAAAGTGCTGTAAC+AGG | 0.409806 | 1.4:-64883643 | MS.gene74906:CDS |
TGGACCGGACCGGTTGGTCT+AGG | 0.409931 | 1.4:-64883724 | MS.gene74906:CDS |
CGCCCAAGAGGCCGTCCATC+AGG | 0.416707 | 1.4:-64883511 | MS.gene74906:CDS |
TCCGACGCGTGCCGCGGGGA+TGG | 0.423656 | 1.4:-64882999 | MS.gene74906:CDS |
CAGTTAGCAATTGGATCTGT+TGG | 0.425855 | 1.4:-64882974 | MS.gene74906:CDS |
GAGCTATGGTGGCGCTTCCT+GGG | 0.429894 | 1.4:-64883285 | MS.gene74906:CDS |
GAGTCTCCGACGCGTGCCGC+GGG | 0.430495 | 1.4:-64883004 | MS.gene74906:CDS |
CTCCTCTCCACTAGGAAAAC+CGG | 0.439999 | 1.4:-64883680 | MS.gene74906:CDS |
ACTCAACTTTGATGGCAAAC+AGG | 0.443330 | 1.4:-64883750 | None:intergenic |
CCGACGCGTGCCGCGGGGAT+GGG | 0.452814 | 1.4:-64882998 | MS.gene74906:CDS |
AGGAAGCGCCACCATAGCTC+CGG | 0.468113 | 1.4:+64883288 | None:intergenic |
GTGGTTGGCGGTGGTGTGGT+TGG | 0.473855 | 1.4:-64883163 | MS.gene74906:CDS |
GTATGAGAGGCTGCCGGTTG+AGG | 0.473968 | 1.4:-64883083 | MS.gene74906:CDS |
GGGATGGGACAGTTAGCAAT+TGG | 0.474463 | 1.4:-64882983 | MS.gene74906:CDS |
GAAGGGCATCAAGGTGGTGG+TGG | 0.477044 | 1.4:-64883046 | MS.gene74906:CDS |
CCCTCCTAGACCAACCGGTC+CGG | 0.477578 | 1.4:+64883720 | None:intergenic |
CTGTCGTTAACGTTTCTCTT+CGG | 0.480165 | 1.4:-64883324 | MS.gene74906:CDS |
GCTTCCTGGACCTTCACCGC+CGG | 0.480251 | 1.4:-64883230 | MS.gene74906:CDS |
TCCATCCCTCCTAGACCAAC+CGG | 0.482993 | 1.4:+64883715 | None:intergenic |
GTTTCTCTTCGGCAACCTAC+AGG | 0.485903 | 1.4:-64883313 | MS.gene74906:CDS |
CTTCCTGGACCTTCACCGCC+GGG | 0.487921 | 1.4:-64883229 | MS.gene74906:CDS |
TGATCATCACCATCCTCAAC+CGG | 0.488150 | 1.4:+64883070 | None:intergenic |
GTCGCCGCCATCAACATAAC+CGG | 0.488771 | 1.4:+64883121 | None:intergenic |
ACCTACAGGTCCCGGAGCTA+TGG | 0.490105 | 1.4:-64883299 | MS.gene74906:CDS |
CCAGTAGCTCCCGGCGGTGA+AGG | 0.497293 | 1.4:+64883220 | None:intergenic |
AGGTCCAGGAAGCACTGAAC+CGG | 0.501544 | 1.4:+64883240 | None:intergenic |
ATGAAGCTTATAATTCTCCC+TGG | 0.502086 | 1.4:-64882862 | MS.gene74906:CDS |
TTGGTCCACTTGTGGCGGCC+GGG | 0.506396 | 1.4:-64883144 | MS.gene74906:CDS |
TTCATGGAGAAACCCAGATC+CGG | 0.506944 | 1.4:+64883661 | None:intergenic |
CAGGAAGGGCATCAAGGTGG+TGG | 0.509483 | 1.4:-64883049 | MS.gene74906:CDS |
TGAAGCTTATAATTCTCCCT+GGG | 0.512515 | 1.4:-64882861 | MS.gene74906:CDS |
CCCATCCCCGCGGCACGCGT+CGG | 0.513325 | 1.4:+64882998 | None:intergenic |
CATGGCTTCGTAGCGCGTTA+GGG | 0.516021 | 1.4:+64883443 | None:intergenic |
CCCTGGGGTCATGCTAGTCA+TGG | 0.516025 | 1.4:-64882845 | MS.gene74906:CDS |
GCTCCCGGCGGTGAAGGTCC+AGG | 0.516377 | 1.4:+64883226 | None:intergenic |
ACCGGCCCGGCCGCCACAAG+TGG | 0.517030 | 1.4:+64883139 | None:intergenic |
CCACCAACATTGTTATAGCC+TGG | 0.521278 | 1.4:+64882932 | None:intergenic |
AAACAGGTGGTGGACCGGAC+CGG | 0.521308 | 1.4:-64883734 | MS.gene74906:CDS |
CTTTGATGGCAAACAGGTGG+TGG | 0.523292 | 1.4:-64883744 | None:intergenic |
ACCTCCACGCGCCGCCCAAG+AGG | 0.524400 | 1.4:-64883523 | MS.gene74906:CDS |
GCAATTGGATCTGTTGGAGA+AGG | 0.525138 | 1.4:-64882968 | MS.gene74906:CDS |
CGAGTCTCCGACGCGTGCCG+CGG | 0.526236 | 1.4:-64883005 | MS.gene74906:CDS |
TTACTCCTGTTACAGCACTT+TGG | 0.526257 | 1.4:+64883638 | None:intergenic |
ACCATGACTAGCATGACCCC+AGG | 0.526448 | 1.4:+64882844 | None:intergenic |
CGCCATCAACATAACCGGCC+CGG | 0.529330 | 1.4:+64883126 | None:intergenic |
GGTTGAGGATGGTGATGATC+AGG | 0.530058 | 1.4:-64883068 | MS.gene74906:CDS |
ACGGCCTCTTGGGCGGCGCG+TGG | 0.532452 | 1.4:+64883519 | None:intergenic |
CATGTCATGGAAGTAGCATC+AGG | 0.533990 | 1.4:-64883424 | MS.gene74906:CDS |
TTTGATATACTCTCTTTGAC+CGG | 0.534621 | 1.4:-64883259 | MS.gene74906:CDS |
GCCTCTTGGGCGGCGCGTGG+AGG | 0.535225 | 1.4:+64883522 | None:intergenic |
CTGATGCTACTTCCATGACA+TGG | 0.535449 | 1.4:+64883425 | None:intergenic |
CTTCGGCAACCTACAGGTCC+CGG | 0.535710 | 1.4:-64883307 | MS.gene74906:CDS |
CGCGCTACGAAGCCATGTCA+TGG | 0.542213 | 1.4:-64883437 | MS.gene74906:CDS |
ACCGGACCGGTTGGTCTAGG+AGG | 0.542357 | 1.4:-64883721 | MS.gene74906:CDS |
GGAAGCGCCACCATAGCTCC+GGG | 0.544398 | 1.4:+64883289 | None:intergenic |
TTTCGAATGCGACGTATGAG+AGG | 0.546898 | 1.4:-64883096 | MS.gene74906:CDS |
TGGTGTGGTTGGTCCACTTG+TGG | 0.553800 | 1.4:-64883152 | MS.gene74906:CDS |
CCACTAGGAAAACCGGATCT+GGG | 0.555591 | 1.4:-64883673 | MS.gene74906:CDS |
ATGGCAAACAGGTGGTGGAC+CGG | 0.556090 | 1.4:-64883739 | MS.gene74906:CDS |
CAAGGACAAGTGGTTGGCGG+TGG | 0.556749 | 1.4:-64883172 | MS.gene74906:CDS |
ATTTATCTTTCTGGAGGACA+AGG | 0.556764 | 1.4:-64883190 | MS.gene74906:CDS |
ACCGGTTGGTCTAGGAGGGA+TGG | 0.562112 | 1.4:-64883716 | MS.gene74906:CDS |
TACAGGTCCCGGAGCTATGG+TGG | 0.562505 | 1.4:-64883296 | MS.gene74906:CDS |
CCGGACCGGTTGGTCTAGGA+GGG | 0.566185 | 1.4:-64883720 | MS.gene74906:CDS |
CCAGGCTATAACAATGTTGG+TGG | 0.566237 | 1.4:-64882932 | MS.gene74906:CDS |
TTGACTATTTATCTTTCTGG+AGG | 0.567765 | 1.4:-64883196 | MS.gene74906:CDS |
CCACCAGGCTATAACAATGT+TGG | 0.572328 | 1.4:-64882935 | MS.gene74906:CDS |
GGACAAGGACAAGTGGTTGG+CGG | 0.574410 | 1.4:-64883175 | MS.gene74906:CDS |
AATTTGGGTGTTTCAAATGG+AGG | 0.577814 | 1.4:-64882908 | MS.gene74906:CDS |
AGCGACGAACACAAAGGAGG+TGG | 0.581244 | 1.4:-64883559 | MS.gene74906:CDS |
ACAAGTGGTTGGCGGTGGTG+TGG | 0.585162 | 1.4:-64883167 | MS.gene74906:CDS |
GATGATCAGGAAGGGCATCA+AGG | 0.592117 | 1.4:-64883055 | MS.gene74906:CDS |
TCAGTAACCTCCTCTCCACT+AGG | 0.593822 | 1.4:-64883688 | MS.gene74906:CDS |
ATAGTCAAACCAGTAGCTCC+CGG | 0.594640 | 1.4:+64883211 | None:intergenic |
GGAGGACAAGGACAAGTGGT+TGG | 0.595598 | 1.4:-64883178 | MS.gene74906:CDS |
AATTAGTATACTTAGTATGG+TGG | 0.597096 | 1.4:+64882818 | None:intergenic |
ATTTGCATTCTAAGCGCAAG+TGG | 0.597435 | 1.4:-64883349 | MS.gene74906:CDS |
CTGATGGACGGCCTCTTGGG+CGG | 0.597863 | 1.4:+64883512 | None:intergenic |
GAGAGGCTGCCGGTTGAGGA+TGG | 0.598538 | 1.4:-64883079 | MS.gene74906:CDS |
TCTCTTGTTATGAATATCGG+TGG | 0.603718 | 1.4:+64883469 | None:intergenic |
TTCTGGAGGACAAGGACAAG+TGG | 0.603921 | 1.4:-64883182 | MS.gene74906:CDS |
ACCATAGCTCCGGGACCTGT+AGG | 0.618743 | 1.4:+64883298 | None:intergenic |
AGGTGGTGGACCGGACCGGT+TGG | 0.621643 | 1.4:-64883730 | MS.gene74906:CDS |
GAGAGTATATCAAATCTCCC+AGG | 0.628363 | 1.4:+64883268 | None:intergenic |
TGTGGTTGGTCCACTTGTGG+CGG | 0.637462 | 1.4:-64883149 | MS.gene74906:CDS |
GAAGGTTCTTCAATTCCACC+AGG | 0.641251 | 1.4:-64882950 | MS.gene74906:CDS |
GAGGATGGTGATGATCAGGA+AGG | 0.642087 | 1.4:-64883064 | MS.gene74906:CDS |
GAAAACAGCGACGAACACAA+AGG | 0.642908 | 1.4:-64883565 | MS.gene74906:CDS |
AGGATGGTGATGATCAGGAA+GGG | 0.650071 | 1.4:-64883063 | MS.gene74906:CDS |
AGTCTCCGACGCGTGCCGCG+GGG | 0.661832 | 1.4:-64883003 | MS.gene74906:CDS |
AACAGCGACGAACACAAAGG+AGG | 0.671516 | 1.4:-64883562 | MS.gene74906:CDS |
CAACTTTGATGGCAAACAGG+TGG | 0.677591 | 1.4:-64883747 | None:intergenic |
TGCGACGTATGAGAGGCTGC+CGG | 0.686290 | 1.4:-64883089 | MS.gene74906:CDS |
CCAACATTGTTATAGCCTGG+TGG | 0.688924 | 1.4:+64882935 | None:intergenic |
CCATGACTAGCATGACCCCA+GGG | 0.694474 | 1.4:+64882845 | None:intergenic |
CGGGCCGGTTATGTTGATGG+CGG | 0.696514 | 1.4:-64883125 | MS.gene74906:CDS |
TGCTAACTGTCCCATCCCCG+CGG | 0.697320 | 1.4:+64882988 | None:intergenic |
GATCAGGAAGGGCATCAAGG+TGG | 0.707265 | 1.4:-64883052 | MS.gene74906:CDS |
TTTGCAAGAAAACGACAGAG+AGG | 0.730654 | 1.4:-64883373 | MS.gene74906:CDS |
GAAGCTTATAATTCTCCCTG+GGG | 0.741712 | 1.4:-64882860 | MS.gene74906:CDS |
GTCAAACCAGTAGCTCCCGG+CGG | 0.770924 | 1.4:+64883214 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTATCTCTTGTTATGAATAT+CGG | + | chr1.4:64883105-64883124 | None:intergenic | 25.0% |
GGTTTGACTATTTATCTTTC+TGG | - | chr1.4:64883369-64883388 | MS.gene74906:CDS | 30.0% | |
TTGACTATTTATCTTTCTGG+AGG | - | chr1.4:64883372-64883391 | MS.gene74906:CDS | 30.0% | |
TTTGATATACTCTCTTTGAC+CGG | - | chr1.4:64883309-64883328 | MS.gene74906:CDS | 30.0% | |
!! | AACAATGTTGGTGGTAATTT+GGG | - | chr1.4:64883645-64883664 | MS.gene74906:CDS | 30.0% |
!! | TAACAATGTTGGTGGTAATT+TGG | - | chr1.4:64883644-64883663 | MS.gene74906:CDS | 30.0% |
AATTTGGGTGTTTCAAATGG+AGG | - | chr1.4:64883660-64883679 | MS.gene74906:CDS | 35.0% | |
ATGAAGCTTATAATTCTCCC+TGG | - | chr1.4:64883706-64883725 | MS.gene74906:CDS | 35.0% | |
GGTAATTTGGGTGTTTCAAA+TGG | - | chr1.4:64883657-64883676 | MS.gene74906:CDS | 35.0% | |
TGAAGCTTATAATTCTCCCT+GGG | - | chr1.4:64883707-64883726 | MS.gene74906:CDS | 35.0% | |
! | ATTTATCTTTCTGGAGGACA+AGG | - | chr1.4:64883378-64883397 | MS.gene74906:CDS | 35.0% |
! | GTTATGAATATCGGTGGTTT+TGG | + | chr1.4:64883096-64883115 | None:intergenic | 35.0% |
! | TCTCTTGTTATGAATATCGG+TGG | + | chr1.4:64883102-64883121 | None:intergenic | 35.0% |
!!! | GGTTTGTTTTTTGAACCTGA+TGG | + | chr1.4:64883075-64883094 | None:intergenic | 35.0% |
!!! | TGTTTTTTGAACCTGATGGA+CGG | + | chr1.4:64883071-64883090 | None:intergenic | 35.0% |
ATTTGCATTCTAAGCGCAAG+TGG | - | chr1.4:64883219-64883238 | MS.gene74906:CDS | 40.0% | |
CAGTTAGCAATTGGATCTGT+TGG | - | chr1.4:64883594-64883613 | MS.gene74906:CDS | 40.0% | |
CTGTCGTTAACGTTTCTCTT+CGG | - | chr1.4:64883244-64883263 | MS.gene74906:CDS | 40.0% | |
GAAGCTTATAATTCTCCCTG+GGG | - | chr1.4:64883708-64883727 | MS.gene74906:CDS | 40.0% | |
TTACTCCTGTTACAGCACTT+TGG | + | chr1.4:64882933-64882952 | None:intergenic | 40.0% | |
TTTGCAAGAAAACGACAGAG+AGG | - | chr1.4:64883195-64883214 | MS.gene74906:CDS | 40.0% | |
! | GAGAGTATATCAAATCTCCC+AGG | + | chr1.4:64883303-64883322 | None:intergenic | 40.0% |
! | TGTTACAGCACTTTGGTTCA+TGG | + | chr1.4:64882926-64882945 | None:intergenic | 40.0% |
!! | ATGAACCAAAGTGCTGTAAC+AGG | - | chr1.4:64882925-64882944 | MS.gene74906:CDS | 40.0% |
ATAGTCAAACCAGTAGCTCC+CGG | + | chr1.4:64883360-64883379 | None:intergenic | 45.0% | |
CATGTCATGGAAGTAGCATC+AGG | - | chr1.4:64883144-64883163 | MS.gene74906:CDS | 45.0% | |
CCAACATTGTTATAGCCTGG+TGG | + | chr1.4:64883636-64883655 | None:intergenic | 45.0% | |
CCACCAACATTGTTATAGCC+TGG | + | chr1.4:64883639-64883658 | None:intergenic | 45.0% | |
CCACCAGGCTATAACAATGT+TGG | - | chr1.4:64883633-64883652 | MS.gene74906:CDS | 45.0% | |
CCAGGCTATAACAATGTTGG+TGG | - | chr1.4:64883636-64883655 | MS.gene74906:CDS | 45.0% | |
GAAAACAGCGACGAACACAA+AGG | - | chr1.4:64883003-64883022 | MS.gene74906:CDS | 45.0% | |
GAAGGTTCTTCAATTCCACC+AGG | - | chr1.4:64883618-64883637 | MS.gene74906:CDS | 45.0% | |
GCAATTGGATCTGTTGGAGA+AGG | - | chr1.4:64883600-64883619 | MS.gene74906:CDS | 45.0% | |
TGATCATCACCATCCTCAAC+CGG | + | chr1.4:64883501-64883520 | None:intergenic | 45.0% | |
TTCATGGAGAAACCCAGATC+CGG | + | chr1.4:64882910-64882929 | None:intergenic | 45.0% | |
TTTCGAATGCGACGTATGAG+AGG | - | chr1.4:64883472-64883491 | MS.gene74906:CDS | 45.0% | |
! | AGGATGGTGATGATCAGGAA+GGG | - | chr1.4:64883505-64883524 | MS.gene74906:CDS | 45.0% |
! | CTGATGCTACTTCCATGACA+TGG | + | chr1.4:64883146-64883165 | None:intergenic | 45.0% |
AACAGCGACGAACACAAAGG+AGG | - | chr1.4:64883006-64883025 | MS.gene74906:CDS | 50.0% | |
CCACTAGGAAAACCGGATCT+GGG | - | chr1.4:64882895-64882914 | MS.gene74906:CDS | 50.0% | |
CTCCTCTCCACTAGGAAAAC+CGG | - | chr1.4:64882888-64882907 | MS.gene74906:CDS | 50.0% | |
GGGATGGGACAGTTAGCAAT+TGG | - | chr1.4:64883585-64883604 | MS.gene74906:CDS | 50.0% | |
GTTTCTCTTCGGCAACCTAC+AGG | - | chr1.4:64883255-64883274 | MS.gene74906:CDS | 50.0% | |
TCAGTAACCTCCTCTCCACT+AGG | - | chr1.4:64882880-64882899 | MS.gene74906:CDS | 50.0% | |
TCCACTAGGAAAACCGGATC+TGG | - | chr1.4:64882894-64882913 | MS.gene74906:CDS | 50.0% | |
! | ATCCGGTTTTCCTAGTGGAG+AGG | + | chr1.4:64882893-64882912 | None:intergenic | 50.0% |
! | GAGGATGGTGATGATCAGGA+AGG | - | chr1.4:64883504-64883523 | MS.gene74906:CDS | 50.0% |
! | GGTTGAGGATGGTGATGATC+AGG | - | chr1.4:64883500-64883519 | MS.gene74906:CDS | 50.0% |
! | TTCTGGAGGACAAGGACAAG+TGG | - | chr1.4:64883386-64883405 | MS.gene74906:CDS | 50.0% |
!! | GATGATCAGGAAGGGCATCA+AGG | - | chr1.4:64883513-64883532 | MS.gene74906:CDS | 50.0% |
ACATGGCTTCGTAGCGCGTT+AGG | + | chr1.4:64883129-64883148 | None:intergenic | 55.0% | |
ACCATGACTAGCATGACCCC+AGG | + | chr1.4:64883727-64883746 | None:intergenic | 55.0% | |
AGCGACGAACACAAAGGAGG+TGG | - | chr1.4:64883009-64883028 | MS.gene74906:CDS | 55.0% | |
CATGGCTTCGTAGCGCGTTA+GGG | + | chr1.4:64883128-64883147 | None:intergenic | 55.0% | |
CCATGACTAGCATGACCCCA+GGG | + | chr1.4:64883726-64883745 | None:intergenic | 55.0% | |
GGACAAGGACAAGTGGTTGG+CGG | - | chr1.4:64883393-64883412 | MS.gene74906:CDS | 55.0% | |
GGAGGACAAGGACAAGTGGT+TGG | - | chr1.4:64883390-64883409 | MS.gene74906:CDS | 55.0% | |
GTCGCCGCCATCAACATAAC+CGG | + | chr1.4:64883450-64883469 | None:intergenic | 55.0% | |
TCCATCCCTCCTAGACCAAC+CGG | + | chr1.4:64882856-64882875 | None:intergenic | 55.0% | |
! | AACCTGATGGACGGCCTCTT+GGG | + | chr1.4:64883062-64883081 | None:intergenic | 55.0% |
! | CCCAGATCCGGTTTTCCTAG+TGG | + | chr1.4:64882898-64882917 | None:intergenic | 55.0% |
! | CGGTTTTCCTAGTGGAGAGG+AGG | + | chr1.4:64882890-64882909 | None:intergenic | 55.0% |
! | TGGTGTGGTTGGTCCACTTG+TGG | - | chr1.4:64883416-64883435 | MS.gene74906:CDS | 55.0% |
! | TGTGGTTGGTCCACTTGTGG+CGG | - | chr1.4:64883419-64883438 | MS.gene74906:CDS | 55.0% |
! | TTGACCGGTTCAGTGCTTCC+TGG | - | chr1.4:64883324-64883343 | MS.gene74906:CDS | 55.0% |
!! | AGGTCCAGGAAGCACTGAAC+CGG | + | chr1.4:64883331-64883350 | None:intergenic | 55.0% |
!! | ATGGCAAACAGGTGGTGGAC+CGG | - | chr1.4:64882829-64882848 | MS.gene74906:CDS | 55.0% |
!! | GATCAGGAAGGGCATCAAGG+TGG | - | chr1.4:64883516-64883535 | MS.gene74906:CDS | 55.0% |
ACAAGTGGTTGGCGGTGGTG+TGG | - | chr1.4:64883401-64883420 | MS.gene74906:CDS | 60.0% | |
ACCATAGCTCCGGGACCTGT+AGG | + | chr1.4:64883273-64883292 | None:intergenic | 60.0% | |
ACCTACAGGTCCCGGAGCTA+TGG | - | chr1.4:64883269-64883288 | MS.gene74906:CDS | 60.0% | |
CAAGGACAAGTGGTTGGCGG+TGG | - | chr1.4:64883396-64883415 | MS.gene74906:CDS | 60.0% | |
CCCTGGGGTCATGCTAGTCA+TGG | - | chr1.4:64883723-64883742 | MS.gene74906:CDS | 60.0% | |
CGCCATCAACATAACCGGCC+CGG | + | chr1.4:64883445-64883464 | None:intergenic | 60.0% | |
CGCGCTACGAAGCCATGTCA+TGG | - | chr1.4:64883131-64883150 | MS.gene74906:CDS | 60.0% | |
CTTCGGCAACCTACAGGTCC+CGG | - | chr1.4:64883261-64883280 | MS.gene74906:CDS | 60.0% | |
GTCAAACCAGTAGCTCCCGG+CGG | + | chr1.4:64883357-64883376 | None:intergenic | 60.0% | |
TACAGGTCCCGGAGCTATGG+TGG | - | chr1.4:64883272-64883291 | MS.gene74906:CDS | 60.0% | |
TGCGACGTATGAGAGGCTGC+CGG | - | chr1.4:64883479-64883498 | MS.gene74906:CDS | 60.0% | |
TGCTAACTGTCCCATCCCCG+CGG | + | chr1.4:64883583-64883602 | None:intergenic | 60.0% | |
! | CGGGCCGGTTATGTTGATGG+CGG | - | chr1.4:64883443-64883462 | MS.gene74906:CDS | 60.0% |
! | GAACCTGATGGACGGCCTCT+TGG | + | chr1.4:64883063-64883082 | None:intergenic | 60.0% |
! | GAGCTATGGTGGCGCTTCCT+GGG | - | chr1.4:64883283-64883302 | MS.gene74906:CDS | 60.0% |
! | GTATGAGAGGCTGCCGGTTG+AGG | - | chr1.4:64883485-64883504 | MS.gene74906:CDS | 60.0% |
!! | AAACAGGTGGTGGACCGGAC+CGG | - | chr1.4:64882834-64882853 | MS.gene74906:CDS | 60.0% |
!! | ACCGGTTGGTCTAGGAGGGA+TGG | - | chr1.4:64882852-64882871 | MS.gene74906:CDS | 60.0% |
!! | AGGAAGCGCCACCATAGCTC+CGG | + | chr1.4:64883283-64883302 | None:intergenic | 60.0% |
!! | CAGGAAGGGCATCAAGGTGG+TGG | - | chr1.4:64883519-64883538 | MS.gene74906:CDS | 60.0% |
!! | CATCAAGGTGGTGGTGGTGG+TGG | - | chr1.4:64883528-64883547 | MS.gene74906:CDS | 60.0% |
!! | GAAGGGCATCAAGGTGGTGG+TGG | - | chr1.4:64883522-64883541 | MS.gene74906:CDS | 60.0% |
CCCTCCTAGACCAACCGGTC+CGG | + | chr1.4:64882851-64882870 | None:intergenic | 65.0% | |
CTTCCTGGACCTTCACCGCC+GGG | - | chr1.4:64883339-64883358 | MS.gene74906:CDS | 65.0% | |
GCTTCCTGGACCTTCACCGC+CGG | - | chr1.4:64883338-64883357 | MS.gene74906:CDS | 65.0% | |
GGCCGGGCCGGTTATGTTGA+TGG | - | chr1.4:64883440-64883459 | MS.gene74906:CDS | 65.0% | |
GTGGTTGGCGGTGGTGTGGT+TGG | - | chr1.4:64883405-64883424 | MS.gene74906:CDS | 65.0% | |
GTTGGTCCACTTGTGGCGGC+CGG | - | chr1.4:64883423-64883442 | MS.gene74906:CDS | 65.0% | |
TTGGTCCACTTGTGGCGGCC+GGG | - | chr1.4:64883424-64883443 | MS.gene74906:CDS | 65.0% | |
! | CTGATGGACGGCCTCTTGGG+CGG | + | chr1.4:64883059-64883078 | None:intergenic | 65.0% |
! | GAGAGGCTGCCGGTTGAGGA+TGG | - | chr1.4:64883489-64883508 | MS.gene74906:CDS | 65.0% |
! | GGAGCTATGGTGGCGCTTCC+TGG | - | chr1.4:64883282-64883301 | MS.gene74906:CDS | 65.0% |
!! | ACCGGACCGGTTGGTCTAGG+AGG | - | chr1.4:64882847-64882866 | MS.gene74906:CDS | 65.0% |
!! | CAAGGTGGTGGTGGTGGTGG+TGG | - | chr1.4:64883531-64883550 | MS.gene74906:CDS | 65.0% |
!! | CCGGACCGGTTGGTCTAGGA+GGG | - | chr1.4:64882848-64882867 | MS.gene74906:CDS | 65.0% |
!! | GGAAGCGCCACCATAGCTCC+GGG | + | chr1.4:64883282-64883301 | None:intergenic | 65.0% |
!! | GGGCATCAAGGTGGTGGTGG+TGG | - | chr1.4:64883525-64883544 | MS.gene74906:CDS | 65.0% |
!! | TGGACCGGACCGGTTGGTCT+AGG | - | chr1.4:64882844-64882863 | MS.gene74906:CDS | 65.0% |
CCAGTAGCTCCCGGCGGTGA+AGG | + | chr1.4:64883351-64883370 | None:intergenic | 70.0% | |
CCTTCACCGCCGGGAGCTAC+TGG | - | chr1.4:64883348-64883367 | MS.gene74906:CDS | 70.0% | |
CGCCCAAGAGGCCGTCCATC+AGG | - | chr1.4:64883057-64883076 | MS.gene74906:CDS | 70.0% | |
!! | AGGTGGTGGACCGGACCGGT+TGG | - | chr1.4:64882838-64882857 | MS.gene74906:CDS | 70.0% |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr1.4:64883534-64883553 | MS.gene74906:CDS | 70.0% |
ACCTCCACGCGCCGCCCAAG+AGG | - | chr1.4:64883045-64883064 | MS.gene74906:CDS | 75.0% | |
AGTCTCCGACGCGTGCCGCG+GGG | - | chr1.4:64883565-64883584 | MS.gene74906:CDS | 75.0% | |
CGAGTCTCCGACGCGTGCCG+CGG | - | chr1.4:64883563-64883582 | MS.gene74906:CDS | 75.0% | |
GAGTCTCCGACGCGTGCCGC+GGG | - | chr1.4:64883564-64883583 | MS.gene74906:CDS | 75.0% | |
GCTCCCGGCGGTGAAGGTCC+AGG | + | chr1.4:64883345-64883364 | None:intergenic | 75.0% | |
TCCACTTGTGGCGGCCGGGC+CGG | - | chr1.4:64883428-64883447 | MS.gene74906:CDS | 75.0% | |
! | ACCGGCCCGGCCGCCACAAG+TGG | + | chr1.4:64883432-64883451 | None:intergenic | 80.0% |
! | ACGGCCTCTTGGGCGGCGCG+TGG | + | chr1.4:64883052-64883071 | None:intergenic | 80.0% |
! | CCCATCCCCGCGGCACGCGT+CGG | + | chr1.4:64883573-64883592 | None:intergenic | 80.0% |
! | CCGACGCGTGCCGCGGGGAT+GGG | - | chr1.4:64883570-64883589 | MS.gene74906:CDS | 80.0% |
! | GCCTCTTGGGCGGCGCGTGG+AGG | + | chr1.4:64883049-64883068 | None:intergenic | 80.0% |
! | TCCGACGCGTGCCGCGGGGA+TGG | - | chr1.4:64883569-64883588 | MS.gene74906:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 64882829 | 64883761 | 64882829 | ID=MS.gene74906 |
chr1.4 | mRNA | 64882829 | 64883761 | 64882829 | ID=MS.gene74906.t1;Parent=MS.gene74906 |
chr1.4 | exon | 64882829 | 64883761 | 64882829 | ID=MS.gene74906.t1.exon1;Parent=MS.gene74906.t1 |
chr1.4 | CDS | 64882829 | 64883761 | 64882829 | ID=cds.MS.gene74906.t1;Parent=MS.gene74906.t1 |
Gene Sequence |
Protein sequence |