AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000846.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000846.01.T01 MTR_1g007320 91.176 578 23 6 1 554 1 574 0.0 1041
MsG0180000846.01.T01 MTR_1g007320 87.716 578 22 7 1 554 1 553 0.0 927
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000846.01.T01 AT2G25870 69.467 488 125 2 90 554 98 584 0.0 657
MsG0180000846.01.T01 AT5G38747 57.627 59 22 1 361 419 73 128 1.43e-14 71.6

Find 160 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATGTTTCATATATTAAA+AGG 0.112234 1:+11972752 None:intergenic
CCATGGCTTGTTACATCTTT+TGG 0.125920 1:-11977385 MsG0180000846.01.T01:CDS
CCAGCAATTGCAACCATTTC+GGG 0.172046 1:-11979352 MsG0180000846.01.T01:CDS
TTCCAGGGATTGCTTGTTTA+TGG 0.209459 1:-11975279 MsG0180000846.01.T01:intron
TGTCATTTATTTGTCATTAT+TGG 0.217372 1:-11972837 MsG0180000846.01.T01:three_prime_UTR
CAACAAGTGGATCATGAAAA+AGG 0.221799 1:+11974657 None:intergenic
CCCTTCTGTTGAAGATCTTC+TGG 0.243748 1:-11974507 MsG0180000846.01.T01:CDS
CCCGAAATGGTTGCAATTGC+TGG 0.248358 1:+11979352 None:intergenic
ACCAGCAATTGCAACCATTT+CGG 0.249025 1:-11979353 MsG0180000846.01.T01:CDS
AGATCATTTATCATTTCTTT+TGG 0.253794 1:+11979704 None:intergenic
GCAATGTTGCTTTCGTTTCT+CGG 0.271933 1:+11979617 None:intergenic
TGGCTGTAACTCATTCATTA+AGG 0.281685 1:-11972817 MsG0180000846.01.T01:three_prime_UTR
AATTACCATCTGAACTGTTT+TGG 0.282851 1:+11977227 None:intergenic
AAGAAGAAGAAGGAGATTAT+TGG 0.283048 1:+11979561 None:intergenic
GCAGGCATGTCTTTACTCTT+TGG 0.308750 1:-11974726 MsG0180000846.01.T01:intron
AAGTAACTAACCAAGATTTC+AGG 0.308843 1:+11979201 None:intergenic
ATGCTTGAGCTGGCTTCTTT+AGG 0.329248 1:-11973095 MsG0180000846.01.T01:CDS
GCCTGATGATCCTGAAATCT+TGG 0.343687 1:-11979211 MsG0180000846.01.T01:intron
AACTCCTTCTTCTTCCTCTT+CGG 0.352512 1:+11979270 None:intergenic
TCTTTACTCTTTGGAGAGTA+AGG 0.360636 1:-11974717 MsG0180000846.01.T01:CDS
TGAAGAGGCTGAAGTAGAAA+TGG 0.361449 1:-11977344 MsG0180000846.01.T01:CDS
TTGGTTCGTGGTATATTGTA+TGG 0.364756 1:+11974627 None:intergenic
GTCAACAAGTTATATACATT+TGG 0.380037 1:+11972570 None:intergenic
CCTTTATTTGCAGCTTATGT+TGG 0.380058 1:-11978064 MsG0180000846.01.T01:intron
AAGAAGGAGATTATTGGAAA+TGG 0.383365 1:+11979567 None:intergenic
TGTCCCAATGGCAATGAAAC+TGG 0.386115 1:-11978384 MsG0180000846.01.T01:CDS
GTTGTTGAATGCGACGGAAT+AGG 0.387795 1:+11979440 None:intergenic
CTTTATTTGCAGCTTATGTT+GGG 0.398548 1:-11978063 MsG0180000846.01.T01:intron
ATATGTTTCATATATTAAAA+GGG 0.399604 1:+11972753 None:intergenic
AAACTCTCTTCAATGCAAAT+CGG 0.409571 1:+11979234 None:intergenic
TGAAGGGAGGGTGGCGGAGA+AGG 0.413952 1:+11979511 None:intergenic
AAACATATGATAGAAAATTC+AGG 0.417509 1:-11972738 MsG0180000846.01.T01:three_prime_UTR
TCTTCTTCCTCTTCGGCGTT+CGG 0.418770 1:+11979277 None:intergenic
GACAAGGTCGGGAAATATAT+AGG 0.421336 1:-11975254 MsG0180000846.01.T01:CDS
AAAAGAAATGATAAATGATC+TGG 0.428790 1:-11979702 MsG0180000846.01.T01:five_prime_UTR
TTATTATCTATCATGTTAAA+CGG 0.430988 1:+11972687 None:intergenic
TGATAGATAATAACCCTTGT+TGG 0.432684 1:-11972677 MsG0180000846.01.T01:three_prime_UTR
CTGGCATTTGATGGTTTGAA+AGG 0.435654 1:-11978365 MsG0180000846.01.T01:CDS
AAAGCTGTGGCAAACGCAAT+TGG 0.436884 1:-11973041 MsG0180000846.01.T01:CDS
TTTGTTGCATCTGACCAGTA+TGG 0.437315 1:+11974040 None:intergenic
AAAAGTGCTGCTTGATCACT+TGG 0.439349 1:-11973939 MsG0180000846.01.T01:CDS
GGTACAATTTCCAGCATGTC+TGG 0.440193 1:+11973989 None:intergenic
TTTAAGAAGGTGGATTTAGC+TGG 0.441156 1:-11976616 MsG0180000846.01.T01:CDS
AATTGCGTTTGCCACAGCTT+TGG 0.449220 1:+11973043 None:intergenic
ACCAAGATTTCAGGATCATC+AGG 0.450187 1:+11979210 None:intergenic
GATAGATAATAACCCTTGTT+GGG 0.450297 1:-11972676 MsG0180000846.01.T01:three_prime_UTR
CTTTCGTTTCTCGGCTTAGC+GGG 0.450522 1:+11979626 None:intergenic
AACTTACACCTCTGTAGAAA+GGG 0.453153 1:+11972934 None:intergenic
CATGCTGGAAATTGTACCCT+TGG 0.454073 1:-11973984 MsG0180000846.01.T01:CDS
TCTGGCATCTGCTGACATAC+AGG 0.454582 1:-11974489 MsG0180000846.01.T01:intron
AATGCCAGTTTCATTGCCAT+TGG 0.454647 1:+11978380 None:intergenic
TGTTTATGGTAGACAAGGTC+GGG 0.459418 1:-11975265 MsG0180000846.01.T01:CDS
AACTCTCTTCAATGCAAATC+GGG 0.460255 1:+11979235 None:intergenic
CGGAATAGGAATGGGATTGA+GGG 0.461244 1:+11979454 None:intergenic
TTAGGCATTGCACTGAGTAA+TGG 0.461385 1:-11973077 MsG0180000846.01.T01:CDS
GCAATGAAACTGGCATTTGA+TGG 0.464043 1:-11978374 MsG0180000846.01.T01:CDS
TCCAACCAAGACTTTGCAAA+AGG 0.464603 1:+11977305 None:intergenic
AGTCTTGGTTGGAAAGGAAA+AGG 0.470726 1:-11977295 MsG0180000846.01.T01:CDS
AATGAGGCACCTTTGGTTCG+TGG 0.470950 1:+11974615 None:intergenic
GCAAGACAAGCAGAGGAAAG+AGG 0.471221 1:-11978012 MsG0180000846.01.T01:CDS
CAACTTACACCTCTGTAGAA+AGG 0.477937 1:+11972933 None:intergenic
TGGAGTTGAAGGGAGGGTGG+CGG 0.479417 1:+11979505 None:intergenic
ATGCCAGTTTCATTGCCATT+GGG 0.481316 1:+11978381 None:intergenic
TCAGAATGCATATCGATAGA+TGG 0.486146 1:+11972986 None:intergenic
TACCCTTGGGAACATGTAAA+GGG 0.486391 1:-11973970 MsG0180000846.01.T01:CDS
GTACCCTTGGGAACATGTAA+AGG 0.489992 1:-11973971 MsG0180000846.01.T01:CDS
CTCTCTCTTTCCTCCTCCGT+CGG 0.491250 1:+11979317 None:intergenic
CAAGACAAGCAGAGGAAAGA+GGG 0.496208 1:-11978011 MsG0180000846.01.T01:CDS
ACGGAATAGGAATGGGATTG+AGG 0.497725 1:+11979453 None:intergenic
ATTATTGGAAATGGAAGCTA+TGG 0.501536 1:+11979576 None:intergenic
GCTGCACGTATTCCCCGAAA+TGG 0.504722 1:+11979339 None:intergenic
TGAGGCCTCTCTCAAAGCCT+TGG 0.508435 1:+11976874 None:intergenic
GATATGCAGATAATGGCTAT+TGG 0.510832 1:-11973140 MsG0180000846.01.T01:intron
GTGGATTTAGCTGGAAAAGA+TGG 0.511679 1:-11976607 MsG0180000846.01.T01:CDS
ATTACCTCTCGACAGACGTC+CGG 0.513505 1:+11975219 None:intergenic
TTGCAAAGTCTTGGTTGGAA+AGG 0.513697 1:-11977301 MsG0180000846.01.T01:CDS
GGTTTAAGCAACGATGAAGA+TGG 0.514129 1:-11973020 MsG0180000846.01.T01:CDS
ATATAGGAGCAGCTTAGATC+CGG 0.515316 1:-11975238 MsG0180000846.01.T01:CDS
CGGATACATTACGTCCATAC+TGG 0.518060 1:-11974054 MsG0180000846.01.T01:CDS
TCAGAAGCCGAACGCCGAAG+AGG 0.519206 1:-11979284 MsG0180000846.01.T01:CDS
TTTCGCGAAGGAAAATGAAT+GGG 0.521861 1:+11972885 None:intergenic
CTTGGGAGTTACTGCTAATG+AGG 0.523463 1:-11973921 MsG0180000846.01.T01:intron
GTCTTGGTTGGAAAGGAAAA+GGG 0.525732 1:-11977294 MsG0180000846.01.T01:CDS
CTGCTATAGATGATGTTGGC+AGG 0.526203 1:-11978319 MsG0180000846.01.T01:CDS
TTTGAGAGAGGCCTCAGCAA+GGG 0.528767 1:-11976867 MsG0180000846.01.T01:CDS
GTGAAAATTGTGATAGCCAC+TGG 0.536129 1:-11976842 MsG0180000846.01.T01:CDS
ATACGTGCAGCCGACGGAGG+AGG 0.536167 1:-11979327 MsG0180000846.01.T01:CDS
GTTCCCTTTACATGTTCCCA+AGG 0.536704 1:+11973967 None:intergenic
CCTTCACAAAATGCAATAAG+TGG 0.536888 1:+11974692 None:intergenic
TACTGGTCAGATGCAACAAA+AGG 0.539035 1:-11974037 MsG0180000846.01.T01:CDS
AATTTCTACTTCAACTGCCA+AGG 0.539368 1:-11976891 MsG0180000846.01.T01:CDS
TGATGAGATCCGTATCCTCA+TGG 0.539656 1:-11977977 MsG0180000846.01.T01:CDS
TCAAGCTGTACCAGACATGC+TGG 0.541670 1:-11973999 MsG0180000846.01.T01:CDS
TAAAACCAACCATGAGGATA+CGG 0.541816 1:+11977968 None:intergenic
GAATGCGACGGAATAGGAAT+GGG 0.544042 1:+11979446 None:intergenic
CCAAAAGATGTAACAAGCCA+TGG 0.544395 1:+11977385 None:intergenic
GAAATGGAAGCTATGGCCTA+TGG 0.544426 1:+11979583 None:intergenic
ATGCTGGAAATTGTACCCTT+GGG 0.548664 1:-11973983 MsG0180000846.01.T01:CDS
GTAATGTATCCGACACACTC+TGG 0.552692 1:+11974065 None:intergenic
TGAATGCGACGGAATAGGAA+TGG 0.553354 1:+11979445 None:intergenic
GCCAGAAGATCTTCAACAGA+AGG 0.554050 1:+11974506 None:intergenic
TTGTTTATGGTAGACAAGGT+CGG 0.557920 1:-11975266 MsG0180000846.01.T01:CDS
AACTGCCAAGGCTTTGAGAG+AGG 0.562759 1:-11976879 MsG0180000846.01.T01:CDS
GAGATCCGTATCCTCATGGT+TGG 0.563066 1:-11977973 MsG0180000846.01.T01:intron
TGATCATGAATTAAGTGAAG+AGG 0.564233 1:-11977359 MsG0180000846.01.T01:CDS
TAATGTATCCGACACACTCT+GGG 0.564410 1:+11974066 None:intergenic
CGGCTTAGCGGGAGATGCAA+TGG 0.564880 1:+11979637 None:intergenic
GCTTTCGTTTCTCGGCTTAG+CGG 0.567166 1:+11979625 None:intergenic
ACGTGACATGATGGAGTTGA+AGG 0.567631 1:+11979494 None:intergenic
TCAATGTCACAACATGAACC+TGG 0.570480 1:-11978197 MsG0180000846.01.T01:CDS
GATACTGCTATAGATGATGT+TGG 0.571424 1:-11978323 MsG0180000846.01.T01:CDS
TTGAGAGAGGCCTCAGCAAG+GGG 0.575910 1:-11976866 MsG0180000846.01.T01:CDS
TATGTTTCATATATTAAAAG+GGG 0.578053 1:+11972754 None:intergenic
GAGGAGGAAAGAGAGAGTAT+CGG 0.580158 1:-11979311 MsG0180000846.01.T01:CDS
TCCCACCAAAACAGTTCAGA+TGG 0.584076 1:-11977232 MsG0180000846.01.T01:intron
ATTGCATTCCCTTTCTACAG+AGG 0.586020 1:-11972942 MsG0180000846.01.T01:three_prime_UTR
AACGCCGAAGAGGAAGAAGA+AGG 0.587913 1:-11979274 MsG0180000846.01.T01:CDS
TTCCCTTTACATGTTCCCAA+GGG 0.592459 1:+11973968 None:intergenic
ACAATAGGAAGATTGAGTCC+AGG 0.593719 1:+11978179 None:intergenic
AGTAGAAATGGAGAAAGAAG+AGG 0.597908 1:-11977332 MsG0180000846.01.T01:CDS
TATGCATTCTGAGCAGCTGA+AGG 0.600572 1:-11972975 MsG0180000846.01.T01:exon
GACAGCAGCAAGACAAGCAG+AGG 0.601250 1:-11978019 MsG0180000846.01.T01:CDS
TGATGTAGAGATGCTTGAGC+TGG 0.601463 1:-11973105 MsG0180000846.01.T01:CDS
CGGGGAATACGTGCAGCCGA+CGG 0.602788 1:-11979333 MsG0180000846.01.T01:CDS
AACGAAAGCAACATTGCTGA+AGG 0.603225 1:-11979611 MsG0180000846.01.T01:five_prime_UTR
CTTTGAGAGAGGCCTCAGCA+AGG 0.603249 1:-11976868 MsG0180000846.01.T01:CDS
CAGATAATGGCTATTGGTGA+TGG 0.605598 1:-11973134 MsG0180000846.01.T01:CDS
TACAATATACCACGAACCAA+AGG 0.605692 1:-11974624 MsG0180000846.01.T01:intron
CTCATCATTACAAAGAAGCA+CGG 0.607621 1:+11978277 None:intergenic
TTGCTTGTTTATGGTAGACA+AGG 0.609418 1:-11975270 MsG0180000846.01.T01:CDS
GGAGGACGAGAGTTACAGAA+AGG 0.611833 1:+11979405 None:intergenic
CGTGATGGCACGTGACATGA+TGG 0.615587 1:+11979485 None:intergenic
GGAATACGTGCAGCCGACGG+AGG 0.618353 1:-11979330 MsG0180000846.01.T01:CDS
TGCATATCGATAGATGGCGT+CGG 0.621958 1:+11972992 None:intergenic
TGATGGAGTTGAAGGGAGGG+TGG 0.624136 1:+11979502 None:intergenic
ATTGCTGAAGGATTAGCCAT+AGG 0.624909 1:-11979599 MsG0180000846.01.T01:five_prime_UTR
AGATCCGGACGTCTGTCGAG+AGG 0.628487 1:-11975223 MsG0180000846.01.T01:intron
GCAAAAGAGACACGGCGAGG+AGG 0.631006 1:+11979387 None:intergenic
TTGAGGGAGAGAGCACGTGA+TGG 0.631396 1:+11979470 None:intergenic
GGCGGCGTTGTTGAATGCGA+CGG 0.632867 1:+11979434 None:intergenic
CCAGAAGATCTTCAACAGAA+GGG 0.634354 1:+11974507 None:intergenic
CGTGACATGATGGAGTTGAA+GGG 0.634360 1:+11979495 None:intergenic
GCTTCGTCTAAATGTCCCAA+TGG 0.644543 1:-11978396 MsG0180000846.01.T01:CDS
TTGGGAACATGTAAAGGGAA+CGG 0.644997 1:-11973965 MsG0180000846.01.T01:CDS
AAATTGTAATGATCCCAACA+AGG 0.649143 1:+11972663 None:intergenic
GTATGGAGTGAATCAACAAG+TGG 0.650294 1:+11974644 None:intergenic
ACATGATGGAGTTGAAGGGA+GGG 0.652932 1:+11979499 None:intergenic
CAGCAATTGCAACCATTTCG+GGG 0.658853 1:-11979351 MsG0180000846.01.T01:CDS
AATTGTAATGATCCCAACAA+GGG 0.659740 1:+11972664 None:intergenic
AGACACTGCCCAGAGTGTGT+CGG 0.664859 1:-11974074 MsG0180000846.01.T01:CDS
ATCAGAGAAGACCAAAGCTG+TGG 0.670500 1:-11973054 MsG0180000846.01.T01:CDS
TGAAAAGCGCAAAAGAGACA+CGG 0.674363 1:+11979379 None:intergenic
GACATGATGGAGTTGAAGGG+AGG 0.677433 1:+11979498 None:intergenic
AGCGCAAAAGAGACACGGCG+AGG 0.682613 1:+11979384 None:intergenic
CGGAGAAGGTTAGAGAAACG+CGG 0.687115 1:+11979525 None:intergenic
AAAGTGCTGCTTGATCACTT+GGG 0.694800 1:-11973938 MsG0180000846.01.T01:CDS
TGGTACAGCTTGAACAACAG+TGG 0.699418 1:+11974009 None:intergenic
ATATTATAAAACCAACCATG+AGG 0.736003 1:+11977962 None:intergenic
AGAGTTACAGAAAGGAACGA+CGG 0.736220 1:+11979413 None:intergenic
GTTACAGAAAGGAACGACGG+CGG 0.740877 1:+11979416 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAAATATAAATATAT+AGG - Chr1:11976338-11976357 MsG0180000846.01.T01:intron 0.0%
!! AAGAAAAATATAATAAAACA+AGG + Chr1:11976059-11976078 None:intergenic 10.0%
!! AGAAAAAAAAAAAAATTCTA+AGG + Chr1:11977953-11977972 None:intergenic 10.0%
!! ATATGTTTCATATATTAAAA+GGG + Chr1:11979516-11979535 None:intergenic 10.0%
!! ATTCAATTAAAAACAAAAAA+AGG + Chr1:11975314-11975333 None:intergenic 10.0%
!! TATAAATTATACTATAATTG+AGG + Chr1:11977828-11977847 None:intergenic 10.0%
!! TTTACAAATAAAGTAATTAA+AGG - Chr1:11976446-11976465 MsG0180000846.01.T01:intron 10.0%
!!! TATTTTATTCATTCTTTTTT+GGG - Chr1:11973811-11973830 MsG0180000846.01.T01:intron 10.0%
!! AAAATAAATAGCTTAAAACA+TGG + Chr1:11975488-11975507 None:intergenic 15.0%
!! AAGATACAATTATATTATGT+TGG - Chr1:11973407-11973426 MsG0180000846.01.T01:intron 15.0%
!! CATATGTTTCATATATTAAA+AGG + Chr1:11979517-11979536 None:intergenic 15.0%
!! GAAATTAAAAGTTAAAGTAA+CGG - Chr1:11974544-11974563 MsG0180000846.01.T01:intron 15.0%
!! TAAAAACAAAAAAAGGATAA+TGG + Chr1:11975307-11975326 None:intergenic 15.0%
!! TATGTTTCATATATTAAAAG+GGG + Chr1:11979515-11979534 None:intergenic 15.0%
!! TTATTATCTATCATGTTAAA+CGG + Chr1:11979582-11979601 None:intergenic 15.0%
!! TTATTATGTTAACTCAAATA+TGG + Chr1:11978471-11978490 None:intergenic 15.0%
!! TTTCAGAATATATATACTTT+AGG + Chr1:11977458-11977477 None:intergenic 15.0%
!!! CAATTTTTCTAATATAAATG+TGG - Chr1:11975548-11975567 MsG0180000846.01.T01:intron 15.0%
!!! CTATTTTATTCATTCTTTTT+TGG - Chr1:11973810-11973829 MsG0180000846.01.T01:intron 15.0%
!!! TAAAATTGATGTCATATTTT+AGG + Chr1:11978879-11978898 None:intergenic 15.0%
!!! TTAAGTATCATATATCTTTT+TGG - Chr1:11976757-11976776 MsG0180000846.01.T01:intron 15.0%
!!! TTATTTTCATTAACAAAAGT+TGG - Chr1:11974442-11974461 MsG0180000846.01.T01:intron 15.0%
!! AAAAGAAATGATAAATGATC+TGG - Chr1:11972564-11972583 MsG0180000846.01.T01:three_prime_UTR 20.0%
!! AAACATATGATAGAAAATTC+AGG - Chr1:11979528-11979547 MsG0180000846.01.T01:CDS 20.0%
!! AACTTGTATGTGATATTTAT+TGG + Chr1:11978003-11978022 None:intergenic 20.0%
!! AATGTTCCTTTATATAATAC+AGG + Chr1:11975337-11975356 None:intergenic 20.0%
!! AATTTAGTCCTTGAAATATT+TGG + Chr1:11978928-11978947 None:intergenic 20.0%
!! AATTTATGATATGCAGATAA+TGG - Chr1:11979119-11979138 MsG0180000846.01.T01:intron 20.0%
!! AGATATATGATACTTAAAAG+CGG + Chr1:11976754-11976773 None:intergenic 20.0%
!! ATTTGCACAAAAAAAATATG+GGG - Chr1:11975148-11975167 MsG0180000846.01.T01:intron 20.0%
!! CATTTGCACAAAAAAAATAT+GGG - Chr1:11975147-11975166 MsG0180000846.01.T01:intron 20.0%
!! CTGAAAAAAAGATTAAAATG+AGG + Chr1:11974859-11974878 None:intergenic 20.0%
!! GTTTATACAAAAACTTAACA+AGG - Chr1:11974011-11974030 MsG0180000846.01.T01:CDS 20.0%
!! TAATTTGAACATTGTGAATT+AGG - Chr1:11975604-11975623 MsG0180000846.01.T01:intron 20.0%
!! TAGTAATCAAACGATTATTT+AGG - Chr1:11973165-11973184 MsG0180000846.01.T01:intron 20.0%
!! TATAAATGTGGATATTCATA+TGG - Chr1:11975560-11975579 MsG0180000846.01.T01:intron 20.0%
!! TATCTGCATATCATAAATTT+GGG + Chr1:11979118-11979137 None:intergenic 20.0%
!! TATTTAACTATTACAGTCTT+TGG + Chr1:11976234-11976253 None:intergenic 20.0%
!! TGCATTGAATAAGATTATTT+AGG - Chr1:11979041-11979060 MsG0180000846.01.T01:intron 20.0%
!! TTAAGAGAAAAATACTTTAC+AGG - Chr1:11977726-11977745 MsG0180000846.01.T01:intron 20.0%
!! TTATCTGCATATCATAAATT+TGG + Chr1:11979119-11979138 None:intergenic 20.0%
!! TTGAATCCTGTATTATATAA+AGG - Chr1:11975328-11975347 MsG0180000846.01.T01:intron 20.0%
!! TTGTTATGAAAAACTGAAAA+AGG + Chr1:11977085-11977104 None:intergenic 20.0%
!!! AGATCATTTATCATTTCTTT+TGG + Chr1:11972565-11972584 None:intergenic 20.0%
!!! ATGTTTTTTGTTTTTCTCAT+TGG + Chr1:11977334-11977353 None:intergenic 20.0%
!!! ATTAATTTGAAGCTTGAAAT+AGG - Chr1:11973653-11973672 MsG0180000846.01.T01:intron 20.0%
!!! CTCATTTTAATCTTTTTTTC+AGG - Chr1:11974857-11974876 MsG0180000846.01.T01:intron 20.0%
!!! GACATCAATTTTATTTTACA+AGG - Chr1:11978886-11978905 MsG0180000846.01.T01:intron 20.0%
!!! TGTCATTTATTTGTCATTAT+TGG - Chr1:11979429-11979448 MsG0180000846.01.T01:CDS 20.0%
!!! TGTGATAGATATTTTTAAGA+AGG - Chr1:11975637-11975656 MsG0180000846.01.T01:intron 20.0%
!!! TGTTTTTTGTTTTTCTCATT+GGG + Chr1:11977333-11977352 None:intergenic 20.0%
!!! TTAATTTCTCTCTTTTGAAA+TGG + Chr1:11974532-11974551 None:intergenic 20.0%
!!! TTAATTTGAAGCTTGAAATA+GGG - Chr1:11973654-11973673 MsG0180000846.01.T01:intron 20.0%
!!! TTTTTGTTATGTAGAAAACT+GGG + Chr1:11977404-11977423 None:intergenic 20.0%
! AACATGAACCAAATATTTCA+AGG - Chr1:11978917-11978936 MsG0180000846.01.T01:intron 25.0%
! AATATAAAGCAAACATCACA+AGG + Chr1:11978815-11978834 None:intergenic 25.0%
! ATAAAACCAAAATACCATAC+TGG + Chr1:11975100-11975119 None:intergenic 25.0%
! ATAATGTTTCATAAGCAATG+GGG + Chr1:11977208-11977227 None:intergenic 25.0%
! ATACAAACTTGAAACTTAGA+TGG - Chr1:11974150-11974169 MsG0180000846.01.T01:intron 25.0%
! ATATTATAAAACCAACCATG+AGG + Chr1:11974307-11974326 None:intergenic 25.0%
! ATCCAAACAAATATCCTTTA+TGG + Chr1:11975974-11975993 None:intergenic 25.0%
! ATCTGCATATCATAAATTTG+GGG + Chr1:11979117-11979136 None:intergenic 25.0%
! ATCTTGCTAACAATTACATT+TGG - Chr1:11978147-11978166 MsG0180000846.01.T01:intron 25.0%
! CATAATGTTTCATAAGCAAT+GGG + Chr1:11977209-11977228 None:intergenic 25.0%
! CCATTTGCACAAAAAAAATA+TGG - Chr1:11975146-11975165 MsG0180000846.01.T01:intron 25.0%
! GAAAATGCAATTCTTACAAT+AGG + Chr1:11974105-11974124 None:intergenic 25.0%
! GAACCAAAAAAATTAATCAG+GGG + Chr1:11979362-11979381 None:intergenic 25.0%
! GATAAATGATCTGGAAAAAT+TGG - Chr1:11972573-11972592 MsG0180000846.01.T01:three_prime_UTR 25.0%
! GGAACCAAAAAAATTAATCA+GGG + Chr1:11979363-11979382 None:intergenic 25.0%
! GTCAACAAGTTATATACATT+TGG + Chr1:11979699-11979718 None:intergenic 25.0%
! TAATTAAAGGCTATGAATGA+AGG - Chr1:11976459-11976478 MsG0180000846.01.T01:intron 25.0%
! TACAAAAACTTAACAAGGAA+TGG - Chr1:11974016-11974035 MsG0180000846.01.T01:CDS 25.0%
! TAGAATGTAAGCAATCATAT+AGG + Chr1:11977685-11977704 None:intergenic 25.0%
! TATGAAAAACTGAAAAAGGA+GGG + Chr1:11977081-11977100 None:intergenic 25.0%
! TGCACTTACTTACTAAATAA+TGG - Chr1:11974584-11974603 MsG0180000846.01.T01:intron 25.0%
! TGTAGTCAATGAACATAATA+TGG + Chr1:11977283-11977302 None:intergenic 25.0%
! TTAAAAATATCTATCACAGC+TGG + Chr1:11975635-11975654 None:intergenic 25.0%
! TTATGAAAAACTGAAAAAGG+AGG + Chr1:11977082-11977101 None:intergenic 25.0%
! TTTGCACAAAAAAAATATGG+GGG - Chr1:11975149-11975168 MsG0180000846.01.T01:intron 25.0%
!! ACTTATGAATTATGATGATG+AGG + Chr1:11974130-11974149 None:intergenic 25.0%
!! TATCAGAAACTACATTTTGT+TGG + Chr1:11976879-11976898 None:intergenic 25.0%
!! TTTCATTTTCTTCTACTTGT+GGG - Chr1:11974722-11974741 MsG0180000846.01.T01:CDS 25.0%
!! TTTTGTGATCATATTTCACA+CGG - Chr1:11978561-11978580 MsG0180000846.01.T01:intron 25.0%
!!! ATACCCCTGATTAATTTTTT+TGG - Chr1:11979356-11979375 MsG0180000846.01.T01:CDS 25.0%
!!! CCATATTTTTTTTGTGCAAA+TGG + Chr1:11975149-11975168 None:intergenic 25.0%
!!! CTTTTTGTTATGTAGAAAAC+TGG + Chr1:11977405-11977424 None:intergenic 25.0%
!!! GATAGATATTTTTAAGAAGG+TGG - Chr1:11975640-11975659 MsG0180000846.01.T01:intron 25.0%
!!! TATTTTTTTTGTGCAAATGG+AGG + Chr1:11975146-11975165 None:intergenic 25.0%
AAACTCTCTTCAATGCAAAT+CGG + Chr1:11973035-11973054 None:intergenic 30.0%
AAATCCATCAATTGTGTTCA+TGG - Chr1:11978990-11979009 MsG0180000846.01.T01:intron 30.0%
AAATGTTGTCCAGTTTCAAT+TGG - Chr1:11973599-11973618 MsG0180000846.01.T01:intron 30.0%
AAATTGTAATGATCCCAACA+AGG + Chr1:11979606-11979625 None:intergenic 30.0%
AACAAGTGGATCATGAAAAA+GGG + Chr1:11977611-11977630 None:intergenic 30.0%
AAGAAGAAGAAGGAGATTAT+TGG + Chr1:11972708-11972727 None:intergenic 30.0%
AAGAAGGAGATTATTGGAAA+TGG + Chr1:11972702-11972721 None:intergenic 30.0%
AAGTAACTAACCAAGATTTC+AGG + Chr1:11973068-11973087 None:intergenic 30.0%
AAGTCATGTGAAATAGTTTG+TGG - Chr1:11973702-11973721 MsG0180000846.01.T01:intron 30.0%
AATAAAGTCCAAAACGACAA+AGG + Chr1:11977142-11977161 None:intergenic 30.0%
AATGATAGAAACTGTGATAG+TGG + Chr1:11976920-11976939 None:intergenic 30.0%
AATTGTAATGATCCCAACAA+GGG + Chr1:11979605-11979624 None:intergenic 30.0%
ACCATCAATTTAGTCTCTAA+AGG - Chr1:11973314-11973333 MsG0180000846.01.T01:intron 30.0%
AGAAACAGAATAGAGTAAGA+TGG - Chr1:11976568-11976587 MsG0180000846.01.T01:intron 30.0%
ATAGATGAATTGTCAAAGAC+AGG - Chr1:11975183-11975202 MsG0180000846.01.T01:intron 30.0%
ATGATAGAAACTGTGATAGT+GGG + Chr1:11976919-11976938 None:intergenic 30.0%
ATGATCACAAAATCATGTCA+TGG + Chr1:11978553-11978572 None:intergenic 30.0%
ATGGTATTCTGACAAATCAT+GGG + Chr1:11975469-11975488 None:intergenic 30.0%
ATGTAGTATGATTGCTAATG+AGG - Chr1:11978660-11978679 MsG0180000846.01.T01:intron 30.0%
ATTATTGGAAATGGAAGCTA+TGG + Chr1:11972693-11972712 None:intergenic 30.0%
CAGTCAATACAAACTTGTAT+GGG + Chr1:11978051-11978070 None:intergenic 30.0%
CCATAATGTTTCATAAGCAA+TGG + Chr1:11977210-11977229 None:intergenic 30.0%
CCATTGCTTATGAAACATTA+TGG - Chr1:11977207-11977226 MsG0180000846.01.T01:intron 30.0%
CTCGAGTAGAAATAAATTGT+TGG - Chr1:11974660-11974679 MsG0180000846.01.T01:CDS 30.0%
GAACATAATATGGCTATTGA+GGG + Chr1:11977273-11977292 None:intergenic 30.0%
GACAACAAAATAAATGTGTG+AGG + Chr1:11978390-11978409 None:intergenic 30.0%
GAGATATTCGATGACAATTA+TGG - Chr1:11975948-11975967 MsG0180000846.01.T01:intron 30.0%
GATAGAAATAATCACTGAAG+AGG - Chr1:11973215-11973234 MsG0180000846.01.T01:intron 30.0%
GATAGATAATAACCCTTGTT+GGG - Chr1:11979590-11979609 MsG0180000846.01.T01:five_prime_UTR 30.0%
GGGAACCAAAAAAATTAATC+AGG + Chr1:11979364-11979383 None:intergenic 30.0%
TAAGTGCATTTGAAAGTTCT+TGG + Chr1:11974572-11974591 None:intergenic 30.0%
TACTAGAACTAATAGAGTGT+GGG + Chr1:11973147-11973166 None:intergenic 30.0%
TATATCTTCTGTGATATGGA+TGG - Chr1:11975248-11975267 MsG0180000846.01.T01:CDS 30.0%
TATTCACTGTTCTCTATTGA+AGG - Chr1:11977863-11977882 MsG0180000846.01.T01:intron 30.0%
TCAAGGACTAAATTAGAACA+AGG - Chr1:11978934-11978953 MsG0180000846.01.T01:intron 30.0%
TCACACGTACATAAACTAAA+AGG + Chr1:11978719-11978738 None:intergenic 30.0%
TCATGAAATCCAATTGAAAC+TGG + Chr1:11973611-11973630 None:intergenic 30.0%
TGAACATAATATGGCTATTG+AGG + Chr1:11977274-11977293 None:intergenic 30.0%
TGATAGATAATAACCCTTGT+TGG - Chr1:11979589-11979608 MsG0180000846.01.T01:five_prime_UTR 30.0%
TGATCATGAATTAAGTGAAG+AGG - Chr1:11974907-11974926 MsG0180000846.01.T01:intron 30.0%
TTCAATTGGATTTCATGATC+AGG - Chr1:11973613-11973632 MsG0180000846.01.T01:intron 30.0%
TTGGAGATAACTTAATCTCT+TGG - Chr1:11976776-11976795 MsG0180000846.01.T01:intron 30.0%
TTGGTATCATACATATAGAG+TGG - Chr1:11978443-11978462 MsG0180000846.01.T01:intron 30.0%
! AATTACCATCTGAACTGTTT+TGG + Chr1:11975042-11975061 None:intergenic 30.0%
! AGTCATGTGAAATAGTTTGT+GGG - Chr1:11973703-11973722 MsG0180000846.01.T01:intron 30.0%
! ATTGTTTCAGAATTTTCTCC+TGG - Chr1:11975683-11975702 MsG0180000846.01.T01:intron 30.0%
! CTTTATTTGCAGCTTATGTT+GGG - Chr1:11974203-11974222 MsG0180000846.01.T01:intron 30.0%
! GTTGGGATCATTACAATTTT+TGG - Chr1:11979607-11979626 MsG0180000846.01.T01:five_prime_UTR 30.0%
! GTTTCATTTTCTTCTACTTG+TGG - Chr1:11974721-11974740 MsG0180000846.01.T01:CDS 30.0%
! TATGAATTATGATGATGAGG+TGG + Chr1:11974127-11974146 None:intergenic 30.0%
! TCCTTTAGAGACTAAATTGA+TGG + Chr1:11973318-11973337 None:intergenic 30.0%
! TGCAATGTTTTCATGTCTAA+AGG - Chr1:11979473-11979492 MsG0180000846.01.T01:CDS 30.0%
! TGTTTTTCTCATTGGGTAAA+AGG + Chr1:11977326-11977345 None:intergenic 30.0%
! TTCATTTTCTTCTACTTGTG+GGG - Chr1:11974723-11974742 MsG0180000846.01.T01:CDS 30.0%
! TTGTCTTTTTCTCTCAAACT+CGG - Chr1:11978405-11978424 MsG0180000846.01.T01:CDS 30.0%
! TTGTTTCAGAATTTTCTCCT+GGG - Chr1:11975684-11975703 MsG0180000846.01.T01:intron 30.0%
! TTTTATTGCAGTTGTCTTTG+AGG + Chr1:11978082-11978101 None:intergenic 30.0%
!! AGGAAAAGTATTGGATTGTT+TGG - Chr1:11976657-11976676 MsG0180000846.01.T01:intron 30.0%
!! GGAAAAGTATTGGATTGTTT+GGG - Chr1:11976658-11976677 MsG0180000846.01.T01:intron 30.0%
!! GGTTTTAATCTCTGAAAAAC+AGG - Chr1:11978752-11978771 MsG0180000846.01.T01:intron 30.0%
!!! TAATCTTTTTTTCAGGTCCA+TGG - Chr1:11974864-11974883 MsG0180000846.01.T01:intron 30.0%
!!! TCTGAAATGTCATTTTTTGC+AGG - Chr1:11977471-11977490 MsG0180000846.01.T01:intron 30.0%
!!! TTTTTTGATAGTCTGTACTC+TGG - Chr1:11973453-11973472 MsG0180000846.01.T01:intron 30.0%
AAAGGAATTCATCAAGCACT+TGG + Chr1:11974187-11974206 None:intergenic 35.0%
AACTCTCTTCAATGCAAATC+GGG + Chr1:11973034-11973053 None:intergenic 35.0%
AACTTACACCTCTGTAGAAA+GGG + Chr1:11979335-11979354 None:intergenic 35.0%
AAGTTAGCAATTCCAGATAG+TGG - Chr1:11976188-11976207 MsG0180000846.01.T01:intron 35.0%
AAGTTGTCAACATTACTCAG+TGG - Chr1:11975926-11975945 MsG0180000846.01.T01:intron 35.0%
AATTTCTACTTCAACTGCCA+AGG - Chr1:11975375-11975394 MsG0180000846.01.T01:intron 35.0%
ACGTGTGACACACTATTTAT+TGG - Chr1:11978731-11978750 MsG0180000846.01.T01:intron 35.0%
AGGTGAAATGTCAAACTACA+AGG + Chr1:11977933-11977952 None:intergenic 35.0%
AGTAGAAATGGAGAAAGAAG+AGG - Chr1:11974934-11974953 MsG0180000846.01.T01:intron 35.0%
AGTTAGCAATTCCAGATAGT+GGG - Chr1:11976189-11976208 MsG0180000846.01.T01:intron 35.0%
ATTAATCATCCATTGAGCTG+AGG - Chr1:11978605-11978624 MsG0180000846.01.T01:intron 35.0%
ATTACCTGTAAAAAAACCCC+AGG + Chr1:11975704-11975723 None:intergenic 35.0%
CAAAACATGTAGCAAGTAAC+CGG + Chr1:11973538-11973557 None:intergenic 35.0%
CAACAAGTGGATCATGAAAA+AGG + Chr1:11977612-11977631 None:intergenic 35.0%
CAGAAGATATAGCTGAACTT+TGG + Chr1:11975239-11975258 None:intergenic 35.0%
CAGCTATATCTTCTGTGATA+TGG - Chr1:11975244-11975263 MsG0180000846.01.T01:CDS 35.0%
CATATAGGATCCCAATAATG+AGG + Chr1:11977670-11977689 None:intergenic 35.0%
CATGAAGAAGAAGAAGAAGA+AGG + Chr1:11972718-11972737 None:intergenic 35.0%
CATGGTATTCTGACAAATCA+TGG + Chr1:11975470-11975489 None:intergenic 35.0%
CCAACATAAGCTGCAAATAA+AGG + Chr1:11974205-11974224 None:intergenic 35.0%
CCTTCACAAAATGCAATAAG+TGG + Chr1:11977577-11977596 None:intergenic 35.0%
CTACTAGAACTAATAGAGTG+TGG + Chr1:11973148-11973167 None:intergenic 35.0%
CTCATCATTACAAAGAAGCA+CGG + Chr1:11973992-11974011 None:intergenic 35.0%
GATACTGCTATAGATGATGT+TGG - Chr1:11973943-11973962 MsG0180000846.01.T01:CDS 35.0%
GATGACAATTATGGCCATAA+AGG - Chr1:11975957-11975976 MsG0180000846.01.T01:intron 35.0%
GCAATCATACTACATTTGCA+TGG + Chr1:11978655-11978674 None:intergenic 35.0%
GCAGTCAATACAAACTTGTA+TGG + Chr1:11978052-11978071 None:intergenic 35.0%
GGAAAACATGTTGAATCTGA+TGG + Chr1:11978532-11978551 None:intergenic 35.0%
GGCCATAAAGGATATTTGTT+TGG - Chr1:11975969-11975988 MsG0180000846.01.T01:intron 35.0%
GTGAGGTGAATAGATATTTG+TGG + Chr1:11978373-11978392 None:intergenic 35.0%
GTTGAAGCTTGAGATACAAA+AGG - Chr1:11974682-11974701 MsG0180000846.01.T01:CDS 35.0%
TAAAACCAACCATGAGGATA+CGG + Chr1:11974301-11974320 None:intergenic 35.0%
TAAGCAATGGGGAAATAAAG+TGG + Chr1:11977197-11977216 None:intergenic 35.0%
TACAATATACCACGAACCAA+AGG - Chr1:11977642-11977661 MsG0180000846.01.T01:intron 35.0%
TCAGAATGCATATCGATAGA+TGG + Chr1:11979283-11979302 None:intergenic 35.0%
TCATAGACACAATTCGAACT+CGG - Chr1:11976366-11976385 MsG0180000846.01.T01:intron 35.0%
TCGGAAAGTGAAAGTAAGAT+TGG - Chr1:11978424-11978443 MsG0180000846.01.T01:intron 35.0%
TGGCTGTAACTCATTCATTA+AGG - Chr1:11979449-11979468 MsG0180000846.01.T01:CDS 35.0%
TGTAAGGAAGATAAGGCATA+GGG + Chr1:11976959-11976978 None:intergenic 35.0%
TTAATCATCCATTGAGCTGA+GGG - Chr1:11978606-11978625 MsG0180000846.01.T01:intron 35.0%
TTGCTTGTTTATGGTAGACA+AGG - Chr1:11976996-11977015 MsG0180000846.01.T01:intron 35.0%
TTGTCCATGAACACAATTGA+TGG + Chr1:11978997-11979016 None:intergenic 35.0%
TTGTGTTACACTTCTGCAAA+AGG - Chr1:11974366-11974385 MsG0180000846.01.T01:intron 35.0%
TTGTTTATGGTAGACAAGGT+CGG - Chr1:11977000-11977019 MsG0180000846.01.T01:intron 35.0%
TTTCGCGAAGGAAAATGAAT+GGG + Chr1:11979384-11979403 None:intergenic 35.0%
TTTGTGTTTCTTGTATGTGC+AGG - Chr1:11977522-11977541 MsG0180000846.01.T01:intron 35.0%
! AATACTTTTCCTGCCAAACA+AGG + Chr1:11976649-11976668 None:intergenic 35.0%
! AATAGTTTGTGGGAACTTCA+TGG - Chr1:11973713-11973732 MsG0180000846.01.T01:intron 35.0%
! ATACTTTTCCTGCCAAACAA+GGG + Chr1:11976648-11976667 None:intergenic 35.0%
! ATTCATTTTCCTTCGCGAAA+AGG - Chr1:11979384-11979403 MsG0180000846.01.T01:CDS 35.0%
! CCACTTATTGCATTTTGTGA+AGG - Chr1:11977574-11977593 MsG0180000846.01.T01:intron 35.0%
! CCTTTATTTGCAGCTTATGT+TGG - Chr1:11974202-11974221 MsG0180000846.01.T01:intron 35.0%
! GATATGCAGATAATGGCTAT+TGG - Chr1:11979126-11979145 MsG0180000846.01.T01:intron 35.0%
! GCTTTCTGTCATCATTGTTT+TGG - Chr1:11978782-11978801 MsG0180000846.01.T01:intron 35.0%
! GGCTGTTACTGTGAAATTTT+TGG - Chr1:11979549-11979568 MsG0180000846.01.T01:exon 35.0%
! TCTTTACTCTTTGGAGAGTA+AGG - Chr1:11977549-11977568 MsG0180000846.01.T01:intron 35.0%
! TCTTTTTCCATACCAGGAAA+GGG - Chr1:11977886-11977905 MsG0180000846.01.T01:intron 35.0%
! TGTGAACCAGTATGGTATTT+TGG - Chr1:11975091-11975110 MsG0180000846.01.T01:intron 35.0%
! TGTTTCAGAATTTTCTCCTG+GGG - Chr1:11975685-11975704 MsG0180000846.01.T01:intron 35.0%
! TGTTTTCATGTCTAAAGGCA+TGG - Chr1:11979478-11979497 MsG0180000846.01.T01:CDS 35.0%
! TTGGTTCGTGGTATATTGTA+TGG + Chr1:11977642-11977661 None:intergenic 35.0%
! TTGTTTGGCAGGAAAAGTAT+TGG - Chr1:11976648-11976667 MsG0180000846.01.T01:intron 35.0%
! TTTAAGAAGGTGGATTTAGC+TGG - Chr1:11975650-11975669 MsG0180000846.01.T01:intron 35.0%
! TTTATTGCAAAGGTTAGCTG+TGG - Chr1:11977156-11977175 MsG0180000846.01.T01:intron 35.0%
! TTTTCGCGAAGGAAAATGAA+TGG + Chr1:11979385-11979404 None:intergenic 35.0%
!! ACAACATCTTACTTTTCCAG+TGG + Chr1:11975443-11975462 None:intergenic 35.0%
!! CGTTTTGGACTTTATTGCAA+AGG - Chr1:11977146-11977165 MsG0180000846.01.T01:intron 35.0%
!! TAACTTGTTGACAGTCAAAC+TGG - Chr1:11979707-11979726 MsG0180000846.01.T01:five_prime_UTR 35.0%
!!! ACTTGACAGCTCTAGTTTTA+TGG + Chr1:11979647-11979666 None:intergenic 35.0%
!!! CAAGAATTCCTGTTTTGATC+CGG - Chr1:11973516-11973535 MsG0180000846.01.T01:intron 35.0%
AACGAAAGCAACATTGCTGA+AGG - Chr1:11972655-11972674 MsG0180000846.01.T01:three_prime_UTR 40.0%
AACTCCTTCTTCTTCCTCTT+CGG + Chr1:11972999-11973018 None:intergenic 40.0%
AAGTGAGTTCCCATATGAAG+AGG - Chr1:11973245-11973264 MsG0180000846.01.T01:intron 40.0%
AATGCCAGTTTCATTGCCAT+TGG + Chr1:11973889-11973908 None:intergenic 40.0%
ACAAAAGGTGGAAAGCAAAC+TGG - Chr1:11974697-11974716 MsG0180000846.01.T01:CDS 40.0%
ACAACATGAGATGAGCATGT+TGG - Chr1:11974767-11974786 MsG0180000846.01.T01:intron 40.0%
ACAATAGGAAGATTGAGTCC+AGG + Chr1:11974090-11974109 None:intergenic 40.0%
ACAGCCTGCTGCAATATTAA+AGG + Chr1:11979067-11979086 None:intergenic 40.0%
ACCAAGATTTCAGGATCATC+AGG + Chr1:11973059-11973078 None:intergenic 40.0%
ACCAGCAATTGCAACCATTT+CGG - Chr1:11972913-11972932 MsG0180000846.01.T01:three_prime_UTR 40.0%
AGAATAGAGTAAGATGGAGC+CGG - Chr1:11976574-11976593 MsG0180000846.01.T01:CDS 40.0%
AGAGTTACAGAAAGGAACGA+CGG + Chr1:11972856-11972875 None:intergenic 40.0%
AGTCTTGGTTGGAAAGGAAA+AGG - Chr1:11974971-11974990 MsG0180000846.01.T01:intron 40.0%
AGTGAGTTCCCATATGAAGA+GGG - Chr1:11973246-11973265 MsG0180000846.01.T01:intron 40.0%
ATATAGGAGCAGCTTAGATC+CGG - Chr1:11977028-11977047 MsG0180000846.01.T01:intron 40.0%
ATGCCAGTTTCATTGCCATT+GGG + Chr1:11973888-11973907 None:intergenic 40.0%
ATGCTGGAAATTGTACCCTT+GGG - Chr1:11978283-11978302 MsG0180000846.01.T01:CDS 40.0%
ATGGAGGTTACTTGAATGTG+AGG + Chr1:11975130-11975149 None:intergenic 40.0%
ATTGCATTCCCTTTCTACAG+AGG - Chr1:11979324-11979343 MsG0180000846.01.T01:CDS 40.0%
CAACTTACACCTCTGTAGAA+AGG + Chr1:11979336-11979355 None:intergenic 40.0%
CATAGACACAATTCGAACTC+GGG - Chr1:11976367-11976386 MsG0180000846.01.T01:intron 40.0%
CATGAAAAAGGGTTAAGCAG+CGG + Chr1:11977600-11977619 None:intergenic 40.0%
CATGTGGTGTAAGGAAGATA+AGG + Chr1:11976966-11976985 None:intergenic 40.0%
CCAAAACGACAAAGGAATAC+AGG + Chr1:11977134-11977153 None:intergenic 40.0%
CCAAAAGATGTAACAAGCCA+TGG + Chr1:11974884-11974903 None:intergenic 40.0%
CCAGAAGATCTTCAACAGAA+GGG + Chr1:11977762-11977781 None:intergenic 40.0%
CTGACATACAGGTATTCACT+AGG - Chr1:11977788-11977807 MsG0180000846.01.T01:intron 40.0%
CTGGACAAAATGTTCTCCTA+TGG - Chr1:11973472-11973491 MsG0180000846.01.T01:intron 40.0%
GAAGCTTGAGATACAAAAGG+TGG - Chr1:11974685-11974704 MsG0180000846.01.T01:CDS 40.0%
GACAAGGTCGGGAAATATAT+AGG - Chr1:11977012-11977031 MsG0180000846.01.T01:intron 40.0%
GCAATGAAACTGGCATTTGA+TGG - Chr1:11973892-11973911 MsG0180000846.01.T01:intron 40.0%
GCGTCATCAGAAACATGAAA+AGG + Chr1:11975733-11975752 None:intergenic 40.0%
GGTTTAAGCAACGATGAAGA+TGG - Chr1:11979246-11979265 MsG0180000846.01.T01:CDS 40.0%
GTATGGAGTGAATCAACAAG+TGG + Chr1:11977625-11977644 None:intergenic 40.0%
GTCAAAGACAGGAAGAAAGA+AGG - Chr1:11975194-11975213 MsG0180000846.01.T01:intron 40.0%
GTCTTGGTTGGAAAGGAAAA+GGG - Chr1:11974972-11974991 MsG0180000846.01.T01:intron 40.0%
GTGAAAATTGTGATAGCCAC+TGG - Chr1:11975424-11975443 MsG0180000846.01.T01:intron 40.0%
GTGGATTTAGCTGGAAAAGA+TGG - Chr1:11975659-11975678 MsG0180000846.01.T01:intron 40.0%
GTGTAAGGAAGATAAGGCAT+AGG + Chr1:11976960-11976979 None:intergenic 40.0%
GTTCTCCTATGGTTTAGTGA+GGG - Chr1:11973483-11973502 MsG0180000846.01.T01:intron 40.0%
TAATCATCCATTGAGCTGAG+GGG - Chr1:11978607-11978626 MsG0180000846.01.T01:intron 40.0%
TAATGTATCCGACACACTCT+GGG + Chr1:11978203-11978222 None:intergenic 40.0%
TACCATAAACAAGCAATCCC+TGG + Chr1:11976992-11977011 None:intergenic 40.0%
TACCCTTGGGAACATGTAAA+GGG - Chr1:11978296-11978315 MsG0180000846.01.T01:CDS 40.0%
TACTGGTCAGATGCAACAAA+AGG - Chr1:11978229-11978248 MsG0180000846.01.T01:CDS 40.0%
TAGGCCTTTAATATTGCAGC+AGG - Chr1:11979060-11979079 MsG0180000846.01.T01:intron 40.0%
TATTATCGAGCTCACTTGCT+GGG - Chr1:11977355-11977374 MsG0180000846.01.T01:CDS 40.0%
TCAACATCTGTGAACCAGTA+TGG - Chr1:11975083-11975102 MsG0180000846.01.T01:intron 40.0%
TCAATGTCACAACATGAACC+TGG - Chr1:11974069-11974088 MsG0180000846.01.T01:CDS 40.0%
TCCAACCAAGACTTTGCAAA+AGG + Chr1:11974964-11974983 None:intergenic 40.0%
TGAAGAGGCTGAAGTAGAAA+TGG - Chr1:11974922-11974941 MsG0180000846.01.T01:intron 40.0%
TGGAGGTTACTTGAATGTGA+GGG + Chr1:11975129-11975148 None:intergenic 40.0%
TGTACAGCATAACACTGTCT+TGG + Chr1:11974804-11974823 None:intergenic 40.0%
TGTTCTCCTATGGTTTAGTG+AGG - Chr1:11973482-11973501 MsG0180000846.01.T01:intron 40.0%
TGTTTATGGTAGACAAGGTC+GGG - Chr1:11977001-11977020 MsG0180000846.01.T01:intron 40.0%
TTACACTTCTGCAAAAGGCA+TGG - Chr1:11974371-11974390 MsG0180000846.01.T01:intron 40.0%
TTATTATCGAGCTCACTTGC+TGG - Chr1:11977354-11977373 MsG0180000846.01.T01:CDS 40.0%
TTCATCAAGCACTTGGCAAT+TGG + Chr1:11974180-11974199 None:intergenic 40.0%
TTCCAGGGATTGCTTGTTTA+TGG - Chr1:11976987-11977006 MsG0180000846.01.T01:intron 40.0%
TTCCCTTTACATGTTCCCAA+GGG + Chr1:11978301-11978320 None:intergenic 40.0%
TTCTCCTATGGTTTAGTGAG+GGG - Chr1:11973484-11973503 MsG0180000846.01.T01:intron 40.0%
TTGCAAAGTCTTGGTTGGAA+AGG - Chr1:11974965-11974984 MsG0180000846.01.T01:intron 40.0%
TTGGGAACATGTAAAGGGAA+CGG - Chr1:11978301-11978320 MsG0180000846.01.T01:CDS 40.0%
TTTGTTGCATCTGACCAGTA+TGG + Chr1:11978229-11978248 None:intergenic 40.0%
! CAGATAATGGCTATTGGTGA+TGG - Chr1:11979132-11979151 MsG0180000846.01.T01:intron 40.0%
! CTGGCATTTGATGGTTTGAA+AGG - Chr1:11973901-11973920 MsG0180000846.01.T01:intron 40.0%
! CTTTTTCCATACCAGGAAAG+GGG - Chr1:11977887-11977906 MsG0180000846.01.T01:intron 40.0%
! GAACTCCTTTTGCAAAGTCT+TGG - Chr1:11974956-11974975 MsG0180000846.01.T01:intron 40.0%
! GTCTTTTTCCATACCAGGAA+AGG - Chr1:11977885-11977904 MsG0180000846.01.T01:intron 40.0%
! TCATCTTTACCTTTTCGCGA+AGG + Chr1:11979396-11979415 None:intergenic 40.0%
! TCCTTTTGCAAAGTCTTGGT+TGG - Chr1:11974960-11974979 MsG0180000846.01.T01:intron 40.0%
! TGAAAAGCGCAAAAGAGACA+CGG + Chr1:11972890-11972909 None:intergenic 40.0%
! TGAAGGTCTTTTTCCATACC+AGG - Chr1:11977880-11977899 MsG0180000846.01.T01:intron 40.0%
! TTAGGCATTGCACTGAGTAA+TGG - Chr1:11979189-11979208 MsG0180000846.01.T01:intron 40.0%
! TTTTTCCATACCAGGAAAGG+GGG - Chr1:11977888-11977907 MsG0180000846.01.T01:intron 40.0%
!! AAAAGTGCTGCTTGATCACT+TGG - Chr1:11978327-11978346 MsG0180000846.01.T01:CDS 40.0%
!! AAAGTGCTGCTTGATCACTT+GGG - Chr1:11978328-11978347 MsG0180000846.01.T01:CDS 40.0%
!! AACCAAAGGTGCCTCATTAT+TGG - Chr1:11977656-11977675 MsG0180000846.01.T01:intron 40.0%
!! ACCAAAGGTGCCTCATTATT+GGG - Chr1:11977657-11977676 MsG0180000846.01.T01:intron 40.0%
!! ATTGCTGAAGGATTAGCCAT+AGG - Chr1:11972667-11972686 MsG0180000846.01.T01:three_prime_UTR 40.0%
!! CCTGTATTCCTTTGTCGTTT+TGG - Chr1:11977131-11977150 MsG0180000846.01.T01:intron 40.0%
!! GCAATGTTGCTTTCGTTTCT+CGG + Chr1:11972652-11972671 None:intergenic 40.0%
!! TACCATCTGAACTGTTTTGG+TGG + Chr1:11975039-11975058 None:intergenic 40.0%
!!! ACCATCTGAACTGTTTTGGT+GGG + Chr1:11975038-11975057 None:intergenic 40.0%
!!! CCATGGCTTGTTACATCTTT+TGG - Chr1:11974881-11974900 MsG0180000846.01.T01:intron 40.0%
!!! TTCTCCTGGGGTTTTTTTAC+AGG - Chr1:11975697-11975716 MsG0180000846.01.T01:intron 40.0%
AAAGCTGTGGCAAACGCAAT+TGG - Chr1:11979225-11979244 MsG0180000846.01.T01:CDS 45.0%
AACAGACACAGATTGAGCAG+AGG - Chr1:11976532-11976551 MsG0180000846.01.T01:intron 45.0%
AACCTCCAGTTCGAAAGGAA+GGG + Chr1:11973274-11973293 None:intergenic 45.0%
AAGCAATCCCTGGAATCATG+TGG + Chr1:11976982-11977001 None:intergenic 45.0%
AATTGCGTTTGCCACAGCTT+TGG + Chr1:11979226-11979245 None:intergenic 45.0%
ACGGAATAGGAATGGGATTG+AGG + Chr1:11972816-11972835 None:intergenic 45.0%
ATCAGAGAAGACCAAAGCTG+TGG - Chr1:11979212-11979231 MsG0180000846.01.T01:CDS 45.0%
ATGACGCCTCTGATTCTACA+AGG - Chr1:11975746-11975765 MsG0180000846.01.T01:intron 45.0%
CAAGACAAGCAGAGGAAAGA+GGG - Chr1:11974255-11974274 MsG0180000846.01.T01:intron 45.0%
CAGCAATTGCAACCATTTCG+GGG - Chr1:11972915-11972934 MsG0180000846.01.T01:three_prime_UTR 45.0%
CATGCTGGAAATTGTACCCT+TGG - Chr1:11978282-11978301 MsG0180000846.01.T01:CDS 45.0%
CCAGCAATTGCAACCATTTC+GGG - Chr1:11972914-11972933 MsG0180000846.01.T01:three_prime_UTR 45.0%
CCCTTCTGTTGAAGATCTTC+TGG - Chr1:11977759-11977778 MsG0180000846.01.T01:intron 45.0%
CCTTACACCACATGATTCCA+GGG - Chr1:11976972-11976991 MsG0180000846.01.T01:intron 45.0%
CGGAATAGGAATGGGATTGA+GGG + Chr1:11972815-11972834 None:intergenic 45.0%
CGGATACATTACGTCCATAC+TGG - Chr1:11978212-11978231 MsG0180000846.01.T01:CDS 45.0%
CTGCTATAGATGATGTTGGC+AGG - Chr1:11973947-11973966 MsG0180000846.01.T01:CDS 45.0%
CTTGGGAGTTACTGCTAATG+AGG - Chr1:11978345-11978364 MsG0180000846.01.T01:CDS 45.0%
GAAATGGAAGCTATGGCCTA+TGG + Chr1:11972686-11972705 None:intergenic 45.0%
GAATGCGACGGAATAGGAAT+GGG + Chr1:11972823-11972842 None:intergenic 45.0%
GCAAGTAACCGGATCAAAAC+AGG + Chr1:11973527-11973546 None:intergenic 45.0%
GCAGGCATGTCTTTACTCTT+TGG - Chr1:11977540-11977559 MsG0180000846.01.T01:intron 45.0%
GCCAGAAGATCTTCAACAGA+AGG + Chr1:11977763-11977782 None:intergenic 45.0%
GCCTGATGATCCTGAAATCT+TGG - Chr1:11973055-11973074 MsG0180000846.01.T01:CDS 45.0%
GCTATGAATGAAGGATGCCA+CGG - Chr1:11976468-11976487 MsG0180000846.01.T01:intron 45.0%
GCTTCGTCTAAATGTCCCAA+TGG - Chr1:11973870-11973889 MsG0180000846.01.T01:intron 45.0%
GGTACAATTTCCAGCATGTC+TGG + Chr1:11978280-11978299 None:intergenic 45.0%
GTAATGTATCCGACACACTC+TGG + Chr1:11978204-11978223 None:intergenic 45.0%
GTACCCTTGGGAACATGTAA+AGG - Chr1:11978295-11978314 MsG0180000846.01.T01:CDS 45.0%
GTCTTAACCTCCAGTTCGAA+AGG + Chr1:11973279-11973298 None:intergenic 45.0%
GTTCCCTTTACATGTTCCCA+AGG + Chr1:11978302-11978321 None:intergenic 45.0%
GTTGTTGAATGCGACGGAAT+AGG + Chr1:11972829-11972848 None:intergenic 45.0%
TAACCTCCAGTTCGAAAGGA+AGG + Chr1:11973275-11973294 None:intergenic 45.0%
TATGCATTCTGAGCAGCTGA+AGG - Chr1:11979291-11979310 MsG0180000846.01.T01:CDS 45.0%
TCCCACCAAAACAGTTCAGA+TGG - Chr1:11975034-11975053 MsG0180000846.01.T01:intron 45.0%
TCCTTACACCACATGATTCC+AGG - Chr1:11976971-11976990 MsG0180000846.01.T01:intron 45.0%
TCTCCTATGGTTTAGTGAGG+GGG - Chr1:11973485-11973504 MsG0180000846.01.T01:intron 45.0%
TGAATGCGACGGAATAGGAA+TGG + Chr1:11972824-11972843 None:intergenic 45.0%
TGATGAGATCCGTATCCTCA+TGG - Chr1:11974289-11974308 MsG0180000846.01.T01:intron 45.0%
TGATGTAGAGATGCTTGAGC+TGG - Chr1:11979161-11979180 MsG0180000846.01.T01:intron 45.0%
TGCATATCGATAGATGGCGT+CGG + Chr1:11979277-11979296 None:intergenic 45.0%
TGGTACAGCTTGAACAACAG+TGG + Chr1:11978260-11978279 None:intergenic 45.0%
TGTCCCAATGGCAATGAAAC+TGG - Chr1:11973882-11973901 MsG0180000846.01.T01:intron 45.0%
! ACATGATGGAGTTGAAGGGA+GGG + Chr1:11972770-11972789 None:intergenic 45.0%
! ACGTGACATGATGGAGTTGA+AGG + Chr1:11972775-11972794 None:intergenic 45.0%
! ATGCTTGAGCTGGCTTCTTT+AGG - Chr1:11979171-11979190 MsG0180000846.01.T01:intron 45.0%
! CACAAAAGGCTTTCGAGTAG+AGG + Chr1:11976614-11976633 None:intergenic 45.0%
! CGTGACATGATGGAGTTGAA+GGG + Chr1:11972774-11972793 None:intergenic 45.0%
! CTACTCGAAAGCCTTTTGTG+AGG - Chr1:11976614-11976633 MsG0180000846.01.T01:CDS 45.0%
! GAGGAGGAAAGAGAGAGTAT+CGG - Chr1:11972955-11972974 MsG0180000846.01.T01:three_prime_UTR 45.0%
! GTGTGTCAGGGATTTGGTTT+AGG + Chr1:11977251-11977270 None:intergenic 45.0%
! TCCCAATAATGAGGCACCTT+TGG + Chr1:11977661-11977680 None:intergenic 45.0%
! TTGCAGTTGTCTTTGAGGAC+AGG + Chr1:11978077-11978096 None:intergenic 45.0%
! TTTTTGTCCCCTCAGCTCAA+TGG + Chr1:11978617-11978636 None:intergenic 45.0%
!! AGCAATTCCAGATAGTGGGT+AGG - Chr1:11976193-11976212 MsG0180000846.01.T01:intron 45.0%
!! GCAATTCCAGATAGTGGGTA+GGG - Chr1:11976194-11976213 MsG0180000846.01.T01:intron 45.0%
!!! GACAGCTCTAGTTTTATGGC+TGG + Chr1:11979643-11979662 None:intergenic 45.0%
!!! ATTTTTTTAGAAATAATATT+TGG - Chr1:11976161-11976180 MsG0180000846.01.T01:intron 5.0%
AACGCCGAAGAGGAAGAAGA+AGG - Chr1:11972992-11973011 MsG0180000846.01.T01:CDS 50.0%
ACATGTCATTCCCCCTTTCC+TGG + Chr1:11977901-11977920 None:intergenic 50.0%
ACCTCCAGTTCGAAAGGAAG+GGG + Chr1:11973273-11973292 None:intergenic 50.0%
AGAGGAAAGAGATGTGCCTC+CGG + Chr1:11976596-11976615 None:intergenic 50.0%
AGTCCCCCTCACTAAACCAT+AGG + Chr1:11973491-11973510 None:intergenic 50.0%
ATAGAGTAAGATGGAGCCGG+AGG - Chr1:11976577-11976596 MsG0180000846.01.T01:CDS 50.0%
ATGGTTTAGTGAGGGGGACT+CGG - Chr1:11973491-11973510 MsG0180000846.01.T01:intron 50.0%
ATTACCTCTCGACAGACGTC+CGG + Chr1:11977050-11977069 None:intergenic 50.0%
CCCGAAATGGTTGCAATTGC+TGG + Chr1:11972917-11972936 None:intergenic 50.0%
CCCTGGAATCATGTGGTGTA+AGG + Chr1:11976975-11976994 None:intergenic 50.0%
CGGAGAAGGTTAGAGAAACG+CGG + Chr1:11972744-11972763 None:intergenic 50.0%
CTTTCGTTTCTCGGCTTAGC+GGG + Chr1:11972643-11972662 None:intergenic 50.0%
GAAGGGGTCCCTCTTCATAT+GGG + Chr1:11973257-11973276 None:intergenic 50.0%
GAGATCCGTATCCTCATGGT+TGG - Chr1:11974293-11974312 MsG0180000846.01.T01:intron 50.0%
GAGCTGCCTTGTAGAATCAG+AGG + Chr1:11975755-11975774 None:intergenic 50.0%
GCAAGACAAGCAGAGGAAAG+AGG - Chr1:11974254-11974273 MsG0180000846.01.T01:intron 50.0%
GCTGCAGAGAACATGTAGGA+TGG - Chr1:11976490-11976509 MsG0180000846.01.T01:intron 50.0%
GCTTTCGTTTCTCGGCTTAG+CGG + Chr1:11972644-11972663 None:intergenic 50.0%
GGAGGACGAGAGTTACAGAA+AGG + Chr1:11972864-11972883 None:intergenic 50.0%
GTTACAGAAAGGAACGACGG+CGG + Chr1:11972853-11972872 None:intergenic 50.0%
TCAAGCTGTACCAGACATGC+TGG - Chr1:11978267-11978286 MsG0180000846.01.T01:CDS 50.0%
TCATTCCCCCTTTCCTGGTA+TGG + Chr1:11977896-11977915 None:intergenic 50.0%
TCTGGCATCTGCTGACATAC+AGG - Chr1:11977777-11977796 MsG0180000846.01.T01:intron 50.0%
TCTTCTTCCTCTTCGGCGTT+CGG + Chr1:11972992-11973011 None:intergenic 50.0%
TTTGAGAGAGGCCTCAGCAA+GGG - Chr1:11975399-11975418 MsG0180000846.01.T01:intron 50.0%
! AATGAGGCACCTTTGGTTCG+TGG + Chr1:11977654-11977673 None:intergenic 50.0%
! AATTTTCACGCCCCTTGCTG+AGG + Chr1:11975413-11975432 None:intergenic 50.0%
! AGCTCACTTGCTGGGATCTA+TGG - Chr1:11977363-11977382 MsG0180000846.01.T01:CDS 50.0%
! ATGGCTATTGAGGGTGTGTC+AGG + Chr1:11977264-11977283 None:intergenic 50.0%
! GACATGATGGAGTTGAAGGG+AGG + Chr1:11972771-11972790 None:intergenic 50.0%
! GGGAACAATGCTTTGAGCAG+TGG - Chr1:11976678-11976697 MsG0180000846.01.T01:intron 50.0%
! TCGAAAGCCTTTTGTGAGGC+AGG - Chr1:11976618-11976637 MsG0180000846.01.T01:CDS 50.0%
! TGGCTATTGAGGGTGTGTCA+GGG + Chr1:11977263-11977282 None:intergenic 50.0%
! TTGAGGGTGTGTCAGGGATT+TGG + Chr1:11977257-11977276 None:intergenic 50.0%
!! AACTGCCAAGGCTTTGAGAG+AGG - Chr1:11975387-11975406 MsG0180000846.01.T01:intron 50.0%
ACCCCTTCCTTTCGAACTGG+AGG - Chr1:11973269-11973288 MsG0180000846.01.T01:intron 55.0%
AGACACTGCCCAGAGTGTGT+CGG - Chr1:11978192-11978211 MsG0180000846.01.T01:CDS 55.0%
CACGGCTGCAGAGAACATGT+AGG - Chr1:11976486-11976505 MsG0180000846.01.T01:intron 55.0%
CCATCTCCCTACCCACTATC+TGG + Chr1:11976203-11976222 None:intergenic 55.0%
CGTGATGGCACGTGACATGA+TGG + Chr1:11972784-11972803 None:intergenic 55.0%
CTACATGTTCTCTGCAGCCG+TGG + Chr1:11976488-11976507 None:intergenic 55.0%
CTCTCTCTTTCCTCCTCCGT+CGG + Chr1:11972952-11972971 None:intergenic 55.0%
GACAGCAGCAAGACAAGCAG+AGG - Chr1:11974247-11974266 MsG0180000846.01.T01:intron 55.0%
GCTGCACGTATTCCCCGAAA+TGG + Chr1:11972930-11972949 None:intergenic 55.0%
GGAAGGGGTCCCTCTTCATA+TGG + Chr1:11973258-11973277 None:intergenic 55.0%
TGAGGCCTCTCTCAAAGCCT+TGG + Chr1:11975395-11975414 None:intergenic 55.0%
TGATGGAGTTGAAGGGAGGG+TGG + Chr1:11972767-11972786 None:intergenic 55.0%
TGGTTTAGTGAGGGGGACTC+GGG - Chr1:11973492-11973511 MsG0180000846.01.T01:intron 55.0%
TTGAGAGAGGCCTCAGCAAG+GGG - Chr1:11975400-11975419 MsG0180000846.01.T01:intron 55.0%
! CTTTGAGAGAGGCCTCAGCA+AGG - Chr1:11975398-11975417 MsG0180000846.01.T01:intron 55.0%
! TTGAGGGAGAGAGCACGTGA+TGG + Chr1:11972799-11972818 None:intergenic 55.0%
!! CCAGATAGTGGGTAGGGAGA+TGG - Chr1:11976200-11976219 MsG0180000846.01.T01:intron 55.0%
AGATCCGGACGTCTGTCGAG+AGG - Chr1:11977043-11977062 MsG0180000846.01.T01:intron 60.0%
AGCGCAAAAGAGACACGGCG+AGG + Chr1:11972885-11972904 None:intergenic 60.0%
CGGCTTAGCGGGAGATGCAA+TGG + Chr1:11972632-11972651 None:intergenic 60.0%
GAGGCAGGTGTGCCCTTGTT+TGG - Chr1:11976633-11976652 MsG0180000846.01.T01:CDS 60.0%
GCAAAAGAGACACGGCGAGG+AGG + Chr1:11972882-11972901 None:intergenic 60.0%
GGCGGCGTTGTTGAATGCGA+CGG + Chr1:11972835-11972854 None:intergenic 60.0%
GGGACCCCTTCCTTTCGAAC+TGG - Chr1:11973266-11973285 MsG0180000846.01.T01:intron 60.0%
GGGCACACCTGCCTCACAAA+AGG + Chr1:11976628-11976647 None:intergenic 60.0%
TCAGAAGCCGAACGCCGAAG+AGG - Chr1:11972982-11973001 MsG0180000846.01.T01:exon 60.0%
TGGAGTTGAAGGGAGGGTGG+CGG + Chr1:11972764-11972783 None:intergenic 60.0%
! CAGGTGTGCCCTTGTTTGGC+AGG - Chr1:11976637-11976656 MsG0180000846.01.T01:CDS 60.0%
ATACGTGCAGCCGACGGAGG+AGG - Chr1:11972939-11972958 MsG0180000846.01.T01:three_prime_UTR 65.0%
CGGGGAATACGTGCAGCCGA+CGG - Chr1:11972933-11972952 MsG0180000846.01.T01:three_prime_UTR 65.0%
GGAATACGTGCAGCCGACGG+AGG - Chr1:11972936-11972955 MsG0180000846.01.T01:three_prime_UTR 65.0%
!! TGAAGGGAGGGTGGCGGAGA+AGG + Chr1:11972758-11972777 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 11972562 11979726 11972562 ID=MsG0180000846.01;Name=MsG0180000846.01
Chr1 mRNA 11972562 11979726 11972562 ID=MsG0180000846.01.T01;Parent=MsG0180000846.01;Name=MsG0180000846.01.T01;_AED=0.36;_eAED=0.36;_QI=173|0.8|0.90|1|1|1|11|424|554
Chr1 exon 11979212 11979726 11979212 ID=MsG0180000846.01.T01:exon:443;Parent=MsG0180000846.01.T01
Chr1 exon 11978181 11978432 11978181 ID=MsG0180000846.01.T01:exon:444;Parent=MsG0180000846.01.T01
Chr1 exon 11977974 11978073 11977974 ID=MsG0180000846.01.T01:exon:445;Parent=MsG0180000846.01.T01
Chr1 exon 11977233 11977409 11977233 ID=MsG0180000846.01.T01:exon:446;Parent=MsG0180000846.01.T01
Chr1 exon 11976838 11976938 11976838 ID=MsG0180000846.01.T01:exon:447;Parent=MsG0180000846.01.T01
Chr1 exon 11976570 11976662 11976570 ID=MsG0180000846.01.T01:exon:448;Parent=MsG0180000846.01.T01
Chr1 exon 11975224 11975295 11975224 ID=MsG0180000846.01.T01:exon:449;Parent=MsG0180000846.01.T01
Chr1 exon 11974625 11974744 11974625 ID=MsG0180000846.01.T01:exon:450;Parent=MsG0180000846.01.T01
Chr1 exon 11974490 11974540 11974490 ID=MsG0180000846.01.T01:exon:451;Parent=MsG0180000846.01.T01
Chr1 exon 11973922 11974110 11973922 ID=MsG0180000846.01.T01:exon:452;Parent=MsG0180000846.01.T01
Chr1 exon 11972562 11973153 11972562 ID=MsG0180000846.01.T01:exon:453;Parent=MsG0180000846.01.T01
Chr1 five_prime_UTR 11979554 11979726 11979554 ID=MsG0180000846.01.T01:five_prime_utr;Parent=MsG0180000846.01.T01
Chr1 CDS 11979212 11979553 11979212 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11978181 11978432 11978181 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11977974 11978073 11977974 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11977233 11977409 11977233 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11976838 11976938 11976838 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11976570 11976662 11976570 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11975224 11975295 11975224 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11974625 11974744 11974625 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11974490 11974540 11974490 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11973922 11974110 11973922 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 CDS 11972986 11973153 11972986 ID=MsG0180000846.01.T01:cds;Parent=MsG0180000846.01.T01
Chr1 three_prime_UTR 11972562 11972985 11972562 ID=MsG0180000846.01.T01:three_prime_utr;Parent=MsG0180000846.01.T01
Gene Sequence

>MsG0180000846.01.T01

ATGCTTCCGCGTTTCTCTAACCTTCTCCGCCACCCTCCCTTCAACTCCATCATGTCACGTGCCATCACGTGCTCTCTCCCTCAATCCCATTCCTATTCCGTCGCATTCAACAACGCCGCCGTCGTTCCTTTCTGTAACTCTCGTCCTCCTCGCCGTGTCTCTTTTGCGCTTTTCAATAACCAGCAATTGCAACCATTTCGGGGAATACGTGCAGCCGACGGAGGAGGAAAGAGAGAGTATCGGAAAGTCAGAAGCCGAACGCCGAAGAGGAAGAAGAAGGAGTTAGAACTCTCTGTCCCGATTTGCATTGAAGAGAGTTTGCCTGATGATCCTGAAATCTTGAATATTGCAGAGATGCTTCGTCTAAATGTCCCAATGGCAATGAAACTGGCATTTGATGGTTTGAAAGGTTCAGAGTATAAAACAAGAGATACTGCTATAGATGATGTTGGCAGGTTTGAAAGTGTTGAGTTATCCGTGCTTCTTTGTAATGATGAGTTTATACAAAAACTTAACAAGGAATGGAGAGATGAAGATCACGCTACTGATGTTCTCTCAATGTCACAACATGAACCTGGACTCAATCTTCCTATTCTTATGTTGGGTGATATTGTAATTTCTCTTGAGACAGCAGCAAGACAAGCAGAGGAAAGAGGGCACACACTTCTTGATGAGATCCGTATCCTCATGGTTGGTCCATGGCTTGTTACATCTTTTGGATTTGATCATGAATTAAGTGAAGAGGCTGAAGTAGAAATGGAGAAAGAAGAGGAACTCCTTTTGCAAAGTCTTGGTTGGAAAGGAAAAGGGCTAATAAAGAGTGCATATGATGCTGAAGAAAATGCAAGTTCCCACCAAAACAGTTCAGATGGAACATTGCTGAACAGCAAAAGTCAAATTTCTACTTCAACTGCCAAGGCTTTGAGAGAGGCCTCAGCAAGGGGCGTGAAAATTGTGATAGCCACTGGAAAAGCTCGTCCAGCTGTGATAGATATTTTTAAGAAGGTGGATTTAGCTGGAAAAGATGGCATTGTTTCAGAATTTTCTCCTGGGGTTTTTTTACAGGGATTGCTTGTTTATGGTAGACAAGGTCGGGAAATATATAGGAGCAGCTTAGATCCGGACGTCTGTCGAGAGGCATGTCTTTACTCTTTGGAGAGTAAGGTTCCACTTATTGCATTTTGTGAAGGCCGCTGCTTAACCCTTTTTCATGATCCACTTGTTGATTCACTCCATACAATATACCACGAACCAAAGGCTGAGATCATCCCTTCTGTTGAAGATCTTCTGGCATCTGCTGACATACAGAAAATGATTTTCTTAGACACTGCCCAGAGTGTGTCGGATACATTACGTCCATACTGGTCAGATGCAACAAAAGGTCGTGCCACTGTTGTTCAAGCTGTACCAGACATGCTGGAAATTGTACCCTTGGGAACATGTAAAGGGAACGGAGTAAAAGTGCTGCTTGATCACTTGGGAGTTACTGCTAATGAGATAATGGCTATTGGTGATGGCGAAAATGATGTAGAGATGCTTGAGCTGGCTTCTTTAGGCATTGCACTGAGTAATGGATCAGAGAAGACCAAAGCTGTGGCAAACGCAATTGGTTTAAGCAACGATGAAGATGGTGCAGCCGACGCCATCTATCGATATGCATTCTGA

Protein sequence

>MsG0180000846.01.T01

MLPRFSNLLRHPPFNSIMSRAITCSLPQSHSYSVAFNNAAVVPFCNSRPPRRVSFALFNNQQLQPFRGIRAADGGGKREYRKVRSRTPKRKKKELELSVPICIEESLPDDPEILNIAEMLRLNVPMAMKLAFDGLKGSEYKTRDTAIDDVGRFESVELSVLLCNDEFIQKLNKEWRDEDHATDVLSMSQHEPGLNLPILMLGDIVISLETAARQAEERGHTLLDEIRILMVGPWLVTSFGFDHELSEEAEVEMEKEEELLLQSLGWKGKGLIKSAYDAEENASSHQNSSDGTLLNSKSQISTSTAKALREASARGVKIVIATGKARPAVIDIFKKVDLAGKDGIVSEFSPGVFLQGLLVYGRQGREIYRSSLDPDVCREACLYSLESKVPLIAFCEGRCLTLFHDPLVDSLHTIYHEPKAEIIPSVEDLLASADIQKMIFLDTAQSVSDTLRPYWSDATKGRATVVQAVPDMLEIVPLGTCKGNGVKVLLDHLGVTANEIMAIGDGENDVEMLELASLGIALSNGSEKTKAVANAIGLSNDEDGAADAIYRYAF*