AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0196580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0196580 MtrunA17_Chr2g0288361 97.403 77 2 0 1 77 1 77 4.48e-53 159
Msa0196580 MtrunA17_Chr4g0024181 49.333 75 35 2 1 74 1 73 3.57e-20 76.3
Msa0196580 MtrunA17_Chr2g0322831 59.184 49 20 0 27 75 32 80 9.03e-18 70.5
Msa0196580 MtrunA17_Chr5g0396771 42.647 68 36 1 7 74 20 84 7.08e-15 63.2
Msa0196580 MtrunA17_Chr3g0121241 51.111 45 22 0 28 72 99 143 1.78e-12 60.5
Msa0196580 MtrunA17_Chr4g0055981 51.163 43 21 0 29 71 113 155 6.65e-12 58.2
Msa0196580 MtrunA17_Chr7g0275911 51.163 43 21 0 30 72 71 113 1.19e-11 57.8
Msa0196580 MtrunA17_Chr7g0240821 47.727 44 23 0 29 72 59 102 1.20e-11 57.8
Msa0196580 MtrunA17_Chr8g0360111 47.727 44 23 0 29 72 83 126 1.78e-11 57.4
Msa0196580 MtrunA17_Chr4g0070641 44.444 45 25 0 28 72 69 113 1.98e-11 56.2
Msa0196580 MtrunA17_Chr7g0229101 45.455 44 24 0 28 71 29 72 2.60e-11 56.6
Msa0196580 MtrunA17_Chr5g0435101 48.837 43 22 0 29 71 69 111 2.98e-11 56.2
Msa0196580 MtrunA17_Chr7g0228991 46.000 50 24 1 18 67 79 125 6.08e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0196580 AT2G46410.1 63.636 44 16 0 27 70 36 79 1.70e-17 70.5
Msa0196580 AT4G01060.1 50.000 64 29 1 7 70 16 76 5.71e-16 65.9
Msa0196580 AT1G01380.1 56.818 44 19 0 27 70 32 75 1.51e-15 65.1
Msa0196580 AT5G53200.1 52.000 50 24 0 27 76 31 80 2.03e-15 65.5
Msa0196580 AT4G01060.2 60.000 45 18 0 26 70 29 73 2.10e-15 64.3
Msa0196580 AT4G01060.3 60.000 45 18 0 26 70 30 74 2.71e-15 64.3
Msa0196580 AT2G30420.1 36.111 72 43 1 1 72 15 83 1.74e-12 58.2
Msa0196580 AT2G30424.1 50.000 44 22 0 27 70 34 77 4.93e-12 56.6
Msa0196580 AT5G52600.1 45.455 44 24 0 29 72 70 113 1.09e-11 57.8
Msa0196580 AT5G14750.4 43.182 44 25 0 29 72 13 56 2.21e-11 55.8
Msa0196580 AT5G14750.2 43.182 44 25 0 29 72 13 56 2.21e-11 55.8
Msa0196580 AT2G30432.1 44.262 61 31 2 10 70 19 76 4.10e-11 53.9
Msa0196580 AT3G13540.1 52.500 40 19 0 30 69 82 121 8.08e-11 55.8

Find 31 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACGATATCTTCCTCTTC+TGG 0.165562 2_1:+13831497 None:intergenic
ATATCTTCTGGGGTTCTTCC+AGG 0.255062 2_1:+13831287 None:intergenic
TGCATATGGATCAATATAAT+AGG 0.367574 2_1:+13830975 None:intergenic
CAACGATATCTTCCTCTTCT+GGG 0.371629 2_1:+13831498 None:intergenic
ATAATTTCAAACCATGCATA+TGG 0.386582 2_1:+13830961 None:intergenic
TGTAGATGGCATCTCATTGC+TGG 0.392405 2_1:-13831317 Msa0196580:intron
TTGTTATTACATCATATTTG+TGG 0.396920 2_1:+13830611 None:intergenic
CTCATTGCTGGGAGAATCCC+TGG 0.434907 2_1:-13831305 Msa0196580:CDS
CAGAAGATATTGAAAAGTAT+TGG 0.446559 2_1:-13831274 Msa0196580:CDS
TCAGTTTATGTGTGCAGTGC+AGG 0.449820 2_1:+13831795 None:intergenic
TATCTTCTGGGGTTCTTCCA+GGG 0.463656 2_1:+13831288 None:intergenic
ATTTGCTCAGGAACTTAGAA+TGG 0.468776 2_1:+13831198 None:intergenic
GATGAAACGTGAGGCTGTGC+TGG 0.475255 2_1:-13831528 Msa0196580:CDS
AATGGCCAGTATGTCTCTTC+AGG 0.479277 2_1:-13831707 Msa0196580:intron
TTGTTTAGAAATAGACATGT+AGG 0.497435 2_1:+13831880 None:intergenic
ATATTTGTGGATAAAGATGT+AGG 0.506418 2_1:+13830624 None:intergenic
AATTACACAATAATTTGCTC+AGG 0.510754 2_1:+13831186 None:intergenic
TGTTTAGATTGGTCGGAAAG+AGG 0.513739 2_1:-13831469 Msa0196580:intron
TGGTACCTGAAGAGACATAC+TGG 0.523534 2_1:+13831702 None:intergenic
AGGAACTTAGAATGGTACTT+AGG 0.533310 2_1:+13831206 None:intergenic
GGATCAATATAATAGGCAAA+AGG 0.539175 2_1:+13830982 None:intergenic
TGTTTAGAAATAGACATGTA+GGG 0.567975 2_1:+13831881 None:intergenic
GTAGATGGCATCTCATTGCT+GGG 0.572643 2_1:-13831316 Msa0196580:intron
ATTATATTGATCCATATGCA+TGG 0.574143 2_1:-13830972 Msa0196580:three_prime_UTR
TATGTGTGCAGTGCAGGCAT+TGG 0.585896 2_1:+13831801 None:intergenic
TATTTGTGGATAAAGATGTA+GGG 0.588008 2_1:+13830625 None:intergenic
CATTGGTATTGAGATAAGCA+TGG 0.590027 2_1:+13831818 None:intergenic
AACGATATCTTCCTCTTCTG+GGG 0.611771 2_1:+13831499 None:intergenic
TATGCAACCACTGCAAACAA+TGG 0.637268 2_1:-13831725 Msa0196580:CDS
ATACTGGCCATTGTTTGCAG+TGG 0.645184 2_1:+13831718 None:intergenic
CTCAGATCAGATGAAACGTG+AGG 0.650176 2_1:-13831537 Msa0196580:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr2_1:13830719-13830738 Msa0196580:intron 0.0%
!! TATATATATATATATATATA+GGG - chr2_1:13830719-13830738 Msa0196580:intron 0.0%
!! ATATATATATATATACAAGA+TGG + chr2_1:13830714-13830733 None:intergenic 10.0%
!! ATATATATATATATACAAGA+TGG + chr2_1:13830714-13830733 None:intergenic 10.0%
!! AAATAGAATGAAATAATCAT+TGG + chr2_1:13831672-13831691 None:intergenic 15.0%
!! AAATAGAATGAAATAATCAT+TGG + chr2_1:13831672-13831691 None:intergenic 15.0%
!! TATACAGATTCATATGATTT+GGG + chr2_1:13830806-13830825 None:intergenic 20.0%
!! ATATACAGATTCATATGATT+TGG + chr2_1:13830807-13830826 None:intergenic 20.0%
!! TATATGTTAATTAACTTCGT+TGG - chr2_1:13830945-13830964 Msa0196580:three_prime_UTR 20.0%
!!! AATACTTTTCAATATCTTCT+GGG + chr2_1:13831106-13831125 None:intergenic 20.0%
!! TTTATCTATCAACAAAAAGT+CGG - chr2_1:13831214-13831233 Msa0196580:three_prime_UTR 20.0%
!!! TTTATATATGCATCTTTTGT+TGG - chr2_1:13831356-13831375 Msa0196580:intron 20.0%
!! GAAAACAATTAAAGTTGTAT+TGG + chr2_1:13831545-13831564 None:intergenic 20.0%
!!! TGTCTTTTTCTAATAAAGTA+AGG - chr2_1:13831623-13831642 Msa0196580:intron 20.0%
!!! TTGTTATTACATCATATTTG+TGG + chr2_1:13831771-13831790 None:intergenic 20.0%
!! TATACAGATTCATATGATTT+GGG + chr2_1:13830806-13830825 None:intergenic 20.0%
!! ATATACAGATTCATATGATT+TGG + chr2_1:13830807-13830826 None:intergenic 20.0%
!! TATATGTTAATTAACTTCGT+TGG - chr2_1:13830945-13830964 Msa0196580:three_prime_UTR 20.0%
!!! AATACTTTTCAATATCTTCT+GGG + chr2_1:13831106-13831125 None:intergenic 20.0%
!! TTTATCTATCAACAAAAAGT+CGG - chr2_1:13831214-13831233 Msa0196580:three_prime_UTR 20.0%
!!! TTTATATATGCATCTTTTGT+TGG - chr2_1:13831356-13831375 Msa0196580:intron 20.0%
!! GAAAACAATTAAAGTTGTAT+TGG + chr2_1:13831545-13831564 None:intergenic 20.0%
!!! TGTCTTTTTCTAATAAAGTA+AGG - chr2_1:13831623-13831642 Msa0196580:intron 20.0%
!!! TTGTTATTACATCATATTTG+TGG + chr2_1:13831771-13831790 None:intergenic 20.0%
! TGTTTAGAAATAGACATGTA+GGG + chr2_1:13830501-13830520 None:intergenic 25.0%
! TTGTTTAGAAATAGACATGT+AGG + chr2_1:13830502-13830521 None:intergenic 25.0%
! TTTGACATGTTAATTGTAGA+TGG - chr2_1:13831048-13831067 Msa0196580:three_prime_UTR 25.0%
!! ATACTTTTCAATATCTTCTG+GGG + chr2_1:13831105-13831124 None:intergenic 25.0%
!! CAATACTTTTCAATATCTTC+TGG + chr2_1:13831107-13831126 None:intergenic 25.0%
!! CAGAAGATATTGAAAAGTAT+TGG - chr2_1:13831105-13831124 Msa0196580:three_prime_UTR 25.0%
!!! AATTACACAATAATTTGCTC+AGG + chr2_1:13831196-13831215 None:intergenic 25.0%
! TGCATATGGATCAATATAAT+AGG + chr2_1:13831407-13831426 None:intergenic 25.0%
! ATTATATTGATCCATATGCA+TGG - chr2_1:13831407-13831426 Msa0196580:intron 25.0%
! ATAATTTCAAACCATGCATA+TGG + chr2_1:13831421-13831440 None:intergenic 25.0%
! TATTTGTGGATAAAGATGTA+GGG + chr2_1:13831757-13831776 None:intergenic 25.0%
! ATATTTGTGGATAAAGATGT+AGG + chr2_1:13831758-13831777 None:intergenic 25.0%
! TGTTTAGAAATAGACATGTA+GGG + chr2_1:13830501-13830520 None:intergenic 25.0%
! TTGTTTAGAAATAGACATGT+AGG + chr2_1:13830502-13830521 None:intergenic 25.0%
! TTTGACATGTTAATTGTAGA+TGG - chr2_1:13831048-13831067 Msa0196580:three_prime_UTR 25.0%
!! ATACTTTTCAATATCTTCTG+GGG + chr2_1:13831105-13831124 None:intergenic 25.0%
!! CAATACTTTTCAATATCTTC+TGG + chr2_1:13831107-13831126 None:intergenic 25.0%
!! CAGAAGATATTGAAAAGTAT+TGG - chr2_1:13831105-13831124 Msa0196580:three_prime_UTR 25.0%
!!! AATTACACAATAATTTGCTC+AGG + chr2_1:13831196-13831215 None:intergenic 25.0%
! TGCATATGGATCAATATAAT+AGG + chr2_1:13831407-13831426 None:intergenic 25.0%
! ATTATATTGATCCATATGCA+TGG - chr2_1:13831407-13831426 Msa0196580:intron 25.0%
! ATAATTTCAAACCATGCATA+TGG + chr2_1:13831421-13831440 None:intergenic 25.0%
! TATTTGTGGATAAAGATGTA+GGG + chr2_1:13831757-13831776 None:intergenic 25.0%
! ATATTTGTGGATAAAGATGT+AGG + chr2_1:13831758-13831777 None:intergenic 25.0%
! AGATTCATATGATTTGGGAA+GGG + chr2_1:13830801-13830820 None:intergenic 30.0%
CGTTGCAAAAATGTTTAGAT+TGG - chr2_1:13830899-13830918 Msa0196580:intron 30.0%
GCAAAAATGTTTAGATTGGT+CGG - chr2_1:13830903-13830922 Msa0196580:intron 30.0%
TCATGTGTTTGTATTGTAGA+AGG - chr2_1:13831010-13831029 Msa0196580:three_prime_UTR 30.0%
! ATATATGCATCTTTTGTTGG+TGG - chr2_1:13831359-13831378 Msa0196580:intron 30.0%
GGATCAATATAATAGGCAAA+AGG + chr2_1:13831400-13831419 None:intergenic 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + chr2_1:13831479-13831498 None:intergenic 30.0%
!! TTCAAAATGAGTGTCACTTT+AGG - chr2_1:13831480-13831499 Msa0196580:CDS 30.0%
! AGATTCATATGATTTGGGAA+GGG + chr2_1:13830801-13830820 None:intergenic 30.0%
CGTTGCAAAAATGTTTAGAT+TGG - chr2_1:13830899-13830918 Msa0196580:intron 30.0%
GCAAAAATGTTTAGATTGGT+CGG - chr2_1:13830903-13830922 Msa0196580:intron 30.0%
TCATGTGTTTGTATTGTAGA+AGG - chr2_1:13831010-13831029 Msa0196580:three_prime_UTR 30.0%
! ATATATGCATCTTTTGTTGG+TGG - chr2_1:13831359-13831378 Msa0196580:intron 30.0%
GGATCAATATAATAGGCAAA+AGG + chr2_1:13831400-13831419 None:intergenic 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + chr2_1:13831479-13831498 None:intergenic 30.0%
!! TTCAAAATGAGTGTCACTTT+AGG - chr2_1:13831480-13831499 Msa0196580:CDS 30.0%
! CATTGGTATTGAGATAAGCA+TGG + chr2_1:13830564-13830583 None:intergenic 35.0%
!!! CACTCATGATTTTTTGAGCT+GGG + chr2_1:13830626-13830645 None:intergenic 35.0%
!!! TCACTCATGATTTTTTGAGC+TGG + chr2_1:13830627-13830646 None:intergenic 35.0%
! GATTCATATGATTTGGGAAG+GGG + chr2_1:13830800-13830819 None:intergenic 35.0%
! CAGATTCATATGATTTGGGA+AGG + chr2_1:13830802-13830821 None:intergenic 35.0%
GTCAAGTTTGTGCAAATACA+AGG + chr2_1:13830977-13830996 None:intergenic 35.0%
AGGAACTTAGAATGGTACTT+AGG + chr2_1:13831176-13831195 None:intergenic 35.0%
ATTTGCTCAGGAACTTAGAA+TGG + chr2_1:13831184-13831203 None:intergenic 35.0%
AAAGTTTGAGAGGGTAAAGT+TGG + chr2_1:13831570-13831589 None:intergenic 35.0%
TGTGAGAGAAAAGTTTGAGA+GGG + chr2_1:13831579-13831598 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG + chr2_1:13831714-13831733 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2_1:13831715-13831734 Msa0196580:CDS 35.0%
! CATTGGTATTGAGATAAGCA+TGG + chr2_1:13830564-13830583 None:intergenic 35.0%
!!! CACTCATGATTTTTTGAGCT+GGG + chr2_1:13830626-13830645 None:intergenic 35.0%
!!! TCACTCATGATTTTTTGAGC+TGG + chr2_1:13830627-13830646 None:intergenic 35.0%
! GATTCATATGATTTGGGAAG+GGG + chr2_1:13830800-13830819 None:intergenic 35.0%
! CAGATTCATATGATTTGGGA+AGG + chr2_1:13830802-13830821 None:intergenic 35.0%
GTCAAGTTTGTGCAAATACA+AGG + chr2_1:13830977-13830996 None:intergenic 35.0%
AGGAACTTAGAATGGTACTT+AGG + chr2_1:13831176-13831195 None:intergenic 35.0%
ATTTGCTCAGGAACTTAGAA+TGG + chr2_1:13831184-13831203 None:intergenic 35.0%
AAAGTTTGAGAGGGTAAAGT+TGG + chr2_1:13831570-13831589 None:intergenic 35.0%
TGTGAGAGAAAAGTTTGAGA+GGG + chr2_1:13831579-13831598 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG + chr2_1:13831714-13831733 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2_1:13831715-13831734 Msa0196580:CDS 35.0%
TATGCAACCACTGCAAACAA+TGG - chr2_1:13830654-13830673 Msa0196580:intron 40.0%
ACAAGATGGTCAACTTGAAG+TGG + chr2_1:13830700-13830719 None:intergenic 40.0%
AACGATATCTTCCTCTTCTG+GGG + chr2_1:13830883-13830902 None:intergenic 40.0%
CAACGATATCTTCCTCTTCT+GGG + chr2_1:13830884-13830903 None:intergenic 40.0%
! TGTTTAGATTGGTCGGAAAG+AGG - chr2_1:13830910-13830929 Msa0196580:intron 40.0%
GTATTTGCACAAACTTGACG+AGG - chr2_1:13830978-13830997 Msa0196580:three_prime_UTR 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_1:13831719-13831738 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + chr2_1:13831476-13831495 None:intergenic 40.0%
GTGTGAGAGAAAAGTTTGAG+AGG + chr2_1:13831580-13831599 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_1:13831719-13831738 Msa0196580:CDS 40.0%
TATGCAACCACTGCAAACAA+TGG - chr2_1:13830654-13830673 Msa0196580:intron 40.0%
ACAAGATGGTCAACTTGAAG+TGG + chr2_1:13830700-13830719 None:intergenic 40.0%
AACGATATCTTCCTCTTCTG+GGG + chr2_1:13830883-13830902 None:intergenic 40.0%
CAACGATATCTTCCTCTTCT+GGG + chr2_1:13830884-13830903 None:intergenic 40.0%
! TGTTTAGATTGGTCGGAAAG+AGG - chr2_1:13830910-13830929 Msa0196580:intron 40.0%
GTATTTGCACAAACTTGACG+AGG - chr2_1:13830978-13830997 Msa0196580:three_prime_UTR 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_1:13831719-13831738 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + chr2_1:13831476-13831495 None:intergenic 40.0%
GTGTGAGAGAAAAGTTTGAG+AGG + chr2_1:13831580-13831599 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_1:13831719-13831738 Msa0196580:CDS 40.0%
TCAGTTTATGTGTGCAGTGC+AGG + chr2_1:13830587-13830606 None:intergenic 45.0%
ATACTGGCCATTGTTTGCAG+TGG + chr2_1:13830664-13830683 None:intergenic 45.0%
AATGGCCAGTATGTCTCTTC+AGG - chr2_1:13830672-13830691 Msa0196580:intron 45.0%
TGGTACCTGAAGAGACATAC+TGG + chr2_1:13830680-13830699 None:intergenic 45.0%
CTCAGATCAGATGAAACGTG+AGG - chr2_1:13830842-13830861 Msa0196580:intron 45.0%
GCAACGATATCTTCCTCTTC+TGG + chr2_1:13830885-13830904 None:intergenic 45.0%
TGTAGATGGCATCTCATTGC+TGG - chr2_1:13831062-13831081 Msa0196580:three_prime_UTR 45.0%
GTAGATGGCATCTCATTGCT+GGG - chr2_1:13831063-13831082 Msa0196580:three_prime_UTR 45.0%
!! TATCTTCTGGGGTTCTTCCA+GGG + chr2_1:13831094-13831113 None:intergenic 45.0%
!! ATATCTTCTGGGGTTCTTCC+AGG + chr2_1:13831095-13831114 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_1:13831718-13831737 Msa0196580:CDS 45.0%
TCAGTTTATGTGTGCAGTGC+AGG + chr2_1:13830587-13830606 None:intergenic 45.0%
ATACTGGCCATTGTTTGCAG+TGG + chr2_1:13830664-13830683 None:intergenic 45.0%
AATGGCCAGTATGTCTCTTC+AGG - chr2_1:13830672-13830691 Msa0196580:intron 45.0%
TGGTACCTGAAGAGACATAC+TGG + chr2_1:13830680-13830699 None:intergenic 45.0%
CTCAGATCAGATGAAACGTG+AGG - chr2_1:13830842-13830861 Msa0196580:intron 45.0%
GCAACGATATCTTCCTCTTC+TGG + chr2_1:13830885-13830904 None:intergenic 45.0%
TGTAGATGGCATCTCATTGC+TGG - chr2_1:13831062-13831081 Msa0196580:three_prime_UTR 45.0%
GTAGATGGCATCTCATTGCT+GGG - chr2_1:13831063-13831082 Msa0196580:three_prime_UTR 45.0%
!! TATCTTCTGGGGTTCTTCCA+GGG + chr2_1:13831094-13831113 None:intergenic 45.0%
!! ATATCTTCTGGGGTTCTTCC+AGG + chr2_1:13831095-13831114 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_1:13831718-13831737 Msa0196580:CDS 45.0%
!! GTATATATATATATATATAT+AGG - chr2_1:13830718-13830737 Msa0196580:intron 5.0%
!! GTATATATATATATATATAT+AGG - chr2_1:13830718-13830737 Msa0196580:intron 5.0%
TATGTGTGCAGTGCAGGCAT+TGG + chr2_1:13830581-13830600 None:intergenic 50.0%
! GCTGGAATTTTCCCCAGAAG+AGG - chr2_1:13830869-13830888 Msa0196580:intron 50.0%
TATGTGTGCAGTGCAGGCAT+TGG + chr2_1:13830581-13830600 None:intergenic 50.0%
! GCTGGAATTTTCCCCAGAAG+AGG - chr2_1:13830869-13830888 Msa0196580:intron 50.0%
GATGAAACGTGAGGCTGTGC+TGG - chr2_1:13830851-13830870 Msa0196580:intron 55.0%
CTCATTGCTGGGAGAATCCC+TGG - chr2_1:13831074-13831093 Msa0196580:three_prime_UTR 55.0%
GATGAAACGTGAGGCTGTGC+TGG - chr2_1:13830851-13830870 Msa0196580:intron 55.0%
CTCATTGCTGGGAGAATCCC+TGG - chr2_1:13831074-13831093 Msa0196580:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 13830492 13831909 13830492 ID=Msa0196580;Name=Msa0196580
chr2_1 mRNA 13830492 13831909 13830492 ID=Msa0196580-mRNA-1;Parent=Msa0196580;Name=Msa0196580-mRNA-1;_AED=0.13;_eAED=0.13;_QI=147|1|1|1|0.66|0.5|4|473|77
chr2_1 exon 13830492 13830661 13830492 ID=Msa0196580-mRNA-1:exon:5992;Parent=Msa0196580-mRNA-1
chr2_1 exon 13830938 13831334 13830938 ID=Msa0196580-mRNA-1:exon:5991;Parent=Msa0196580-mRNA-1
chr2_1 exon 13831470 13831554 13831470 ID=Msa0196580-mRNA-1:exon:5990;Parent=Msa0196580-mRNA-1
chr2_1 exon 13831708 13831909 13831708 ID=Msa0196580-mRNA-1:exon:5989;Parent=Msa0196580-mRNA-1
chr2_1 five_prime_UTR 13831763 13831909 13831763 ID=Msa0196580-mRNA-1:five_prime_utr;Parent=Msa0196580-mRNA-1
chr2_1 CDS 13831708 13831762 13831708 ID=Msa0196580-mRNA-1:cds;Parent=Msa0196580-mRNA-1
chr2_1 CDS 13831470 13831554 13831470 ID=Msa0196580-mRNA-1:cds;Parent=Msa0196580-mRNA-1
chr2_1 CDS 13831241 13831334 13831241 ID=Msa0196580-mRNA-1:cds;Parent=Msa0196580-mRNA-1
chr2_1 three_prime_UTR 13830938 13831240 13830938 ID=Msa0196580-mRNA-1:three_prime_utr;Parent=Msa0196580-mRNA-1
chr2_1 three_prime_UTR 13830492 13830661 13830492 ID=Msa0196580-mRNA-1:three_prime_utr;Parent=Msa0196580-mRNA-1
Gene Sequence

>Msa0196580

ATGAGTGACTCGAAGTATGCAACCACTGCAAACAATGGCCAGTATGTCTCTTCAGATCAGATGAAACGTGAGGCTGTGCTGGAATTTTCCCCAGAAGAGGAAGATATCGTTGCAAAAATGTTTAGATTGGTCGGAAAGAGATGGCATCTCATTGCTGGGAGAATCCCTGGAAGAACCCCAGAAGATATTGAAAAGTATTGGACATCAAAGTTCTCATCATCAACTGCATGCTAA

Protein sequence

>Msa0196580

MSDSKYATTANNGQYVSSDQMKREAVLEFSPEEEDIVAKMFRLVGKRWHLIAGRIPGRTPEDIEKYWTSKFSSSTAC*