AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0462410


Find 344 sgRNAs with CRISPR-Local

Find 1225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr3_3 gene 61413382 61429896 61413382 ID=Msa0462410;Name=Msa0462410
chr3_3 mRNA 61413382 61429896 61413382 ID=Msa0462410-mRNA-1;Parent=Msa0462410;Name=Msa0462410-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.36|0.22|1|0.66|0.51|31|0|1441
chr3_3 exon 61413382 61413478 61413382 ID=Msa0462410-mRNA-1:exon:12950;Parent=Msa0462410-mRNA-1
chr3_3 exon 61413593 61413721 61413593 ID=Msa0462410-mRNA-1:exon:12951;Parent=Msa0462410-mRNA-1
chr3_3 exon 61413806 61413928 61413806 ID=Msa0462410-mRNA-1:exon:12952;Parent=Msa0462410-mRNA-1
chr3_3 exon 61415051 61415141 61415051 ID=Msa0462410-mRNA-1:exon:12953;Parent=Msa0462410-mRNA-1
chr3_3 exon 61415624 61415672 61415624 ID=Msa0462410-mRNA-1:exon:12954;Parent=Msa0462410-mRNA-1
chr3_3 exon 61416170 61416283 61416170 ID=Msa0462410-mRNA-1:exon:12955;Parent=Msa0462410-mRNA-1
chr3_3 exon 61416643 61416736 61416643 ID=Msa0462410-mRNA-1:exon:12956;Parent=Msa0462410-mRNA-1
chr3_3 exon 61416848 61417062 61416848 ID=Msa0462410-mRNA-1:exon:12957;Parent=Msa0462410-mRNA-1
chr3_3 exon 61417173 61417358 61417173 ID=Msa0462410-mRNA-1:exon:12958;Parent=Msa0462410-mRNA-1
chr3_3 exon 61417416 61417577 61417416 ID=Msa0462410-mRNA-1:exon:12959;Parent=Msa0462410-mRNA-1
chr3_3 exon 61417667 61417762 61417667 ID=Msa0462410-mRNA-1:exon:12960;Parent=Msa0462410-mRNA-1
chr3_3 exon 61417890 61417987 61417890 ID=Msa0462410-mRNA-1:exon:12961;Parent=Msa0462410-mRNA-1
chr3_3 exon 61418133 61418241 61418133 ID=Msa0462410-mRNA-1:exon:12962;Parent=Msa0462410-mRNA-1
chr3_3 exon 61419302 61419375 61419302 ID=Msa0462410-mRNA-1:exon:12963;Parent=Msa0462410-mRNA-1
chr3_3 exon 61419715 61419938 61419715 ID=Msa0462410-mRNA-1:exon:12964;Parent=Msa0462410-mRNA-1
chr3_3 exon 61420017 61420262 61420017 ID=Msa0462410-mRNA-1:exon:12965;Parent=Msa0462410-mRNA-1
chr3_3 exon 61422709 61422878 61422709 ID=Msa0462410-mRNA-1:exon:12966;Parent=Msa0462410-mRNA-1
chr3_3 exon 61423011 61423233 61423011 ID=Msa0462410-mRNA-1:exon:12967;Parent=Msa0462410-mRNA-1
chr3_3 exon 61425839 61426004 61425839 ID=Msa0462410-mRNA-1:exon:12968;Parent=Msa0462410-mRNA-1
chr3_3 exon 61426114 61426162 61426114 ID=Msa0462410-mRNA-1:exon:12969;Parent=Msa0462410-mRNA-1
chr3_3 exon 61426419 61426532 61426419 ID=Msa0462410-mRNA-1:exon:12970;Parent=Msa0462410-mRNA-1
chr3_3 exon 61426610 61426670 61426610 ID=Msa0462410-mRNA-1:exon:12971;Parent=Msa0462410-mRNA-1
chr3_3 exon 61426806 61427032 61426806 ID=Msa0462410-mRNA-1:exon:12972;Parent=Msa0462410-mRNA-1
chr3_3 exon 61427248 61427490 61427248 ID=Msa0462410-mRNA-1:exon:12973;Parent=Msa0462410-mRNA-1
chr3_3 exon 61427811 61427906 61427811 ID=Msa0462410-mRNA-1:exon:12974;Parent=Msa0462410-mRNA-1
chr3_3 exon 61428018 61428133 61428018 ID=Msa0462410-mRNA-1:exon:12975;Parent=Msa0462410-mRNA-1
chr3_3 exon 61428288 61428390 61428288 ID=Msa0462410-mRNA-1:exon:12976;Parent=Msa0462410-mRNA-1
chr3_3 exon 61428581 61428644 61428581 ID=Msa0462410-mRNA-1:exon:12977;Parent=Msa0462410-mRNA-1
chr3_3 exon 61428994 61429226 61428994 ID=Msa0462410-mRNA-1:exon:12978;Parent=Msa0462410-mRNA-1
chr3_3 exon 61429266 61429509 61429266 ID=Msa0462410-mRNA-1:exon:12979;Parent=Msa0462410-mRNA-1
chr3_3 exon 61429787 61429896 61429787 ID=Msa0462410-mRNA-1:exon:12980;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61413382 61413478 61413382 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61413593 61413721 61413593 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61413806 61413928 61413806 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61415051 61415141 61415051 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61415624 61415672 61415624 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61416170 61416283 61416170 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61416643 61416736 61416643 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61416848 61417062 61416848 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61417173 61417358 61417173 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61417416 61417577 61417416 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61417667 61417762 61417667 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61417890 61417987 61417890 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61418133 61418241 61418133 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61419302 61419375 61419302 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61419715 61419938 61419715 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61420017 61420262 61420017 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61422709 61422878 61422709 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61423011 61423233 61423011 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61425839 61426004 61425839 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61426114 61426162 61426114 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61426419 61426532 61426419 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61426610 61426670 61426610 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61426806 61427032 61426806 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61427248 61427490 61427248 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61427811 61427906 61427811 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61428018 61428133 61428018 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61428288 61428390 61428288 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61428581 61428644 61428581 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61428994 61429226 61428994 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61429266 61429509 61429266 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
chr3_3 CDS 61429787 61429896 61429787 ID=Msa0462410-mRNA-1:cds;Parent=Msa0462410-mRNA-1
Gene Sequence

>Msa0462410

ATGGGAGCTGACGAGATTGAAGAAGTTTCTGACAATATAGAACTCATTGGTGGTGGTATAACTGAAAGGGTACCTCACAATGGTTCATTGAGCGGACGTGACTCTGTTAGTGTTGAACCTCTTACTGGAATTAACGATCATGGAGAAGACGGAAAACTGGATTCGCTTAGCAAAAAATTAGAGAAGAGAAGGGCTCATTTGAAGGAAGTGTCTAAGGAGATGAAGCGTCTCAACTTTATCTCCAAAGCTGGTGGTGATGATGGATGGCAAAAGGTTTATGGGGAGTTCAGGGAGCTTACTAAAGAAACAAATGGGTTACTTCCTCGTTCTAAATTTGGCGAATGCATAGGCATGAAGAACTCGGAGGACTTTGCAGAAGAGCTTCTTAATGTTATTTCTAAGAGGAGGGATATTCCCCTCCATGGAGATACAATTAATGAGATTGATAAAGATGGTGATGGCAGAATTACCAAGGATGAAATTGAACAGATCATTATCCTTAGCGCCAGTACAAACAAACTTTCAAGCCTAAAGAATCACGCAGAGCAATATGCTGCTTTGATCATGGAAGAACTAGATCCCCATGAAACAGGATATATCACGAAATATGACCTAGAGATACTTTTGTTGCATGGACCAACTCATTCTACAAGAGGGGATAGATACCTGAGCGAAATGCTAAGTATGAAGCTTAAGGGTCTATTTGCCTACAAATTTGTGCAGTATAGAAGAAAAACTGCTTATCAGGTGATGGGCCATTGTGTTTGCATGGCTAAAGGTGCAGCTGAGACACTCAAATTGAACATGGCTATTATCTTGTTACCTGTTTGCCGAAACACTGTTACATGGCTCAGGAGCAAGACCAAGCTAGGCATTGTTGTTCCTTTTAATGACAACCTCAACTTCCACAAGGTAATAGCTGTGGCAGTAGCAATTGGAGTTGGTATACATGCTATTTATCATCTTGCTTGTGACTTTCCTAGCCTTCTTCATGCAAATAGTGAAAAGTACAAGCTCATGGAACCATTTTTTGGAAAGCAAGCAACAAATTATTGGCATTTTGTGAAATCATGGGAAGGAGTAACAGGGATTATAATGGTCGAAGAACCCAAAACACCCAATTGCCTCCAACCCCTCCTCAATAGTGTAACTGGTTTCAATGTCTTCTGGTACACTCATCATCTCTTTGTCTTTGTCTATGCACTTTTGATTGTGCATGGATTCAAACTATACTTTACTAAAGAATGGTACAAGAAAACGACTTGGATGTATTTGGCTATTCCCGTCACCGTTTATGCATTGGAAAGACTGACTAGAATACTCAGACCACGCATCAAATCTGTCAAAATATTAAAGGCGGTTGTTTATAGAAAGGATCTCAAATCTCCTGGAGACGTGTTGGGGCTTCATGTGTCAAAACCTGAGGGGTTTAGATACAAGAGCGGACAATACATGCATCCATTTTCTATAACCTCAGCCCCAGGGGATGACTACCTTAGCGTTCACATCAAGAGGAACGGTGACTGGACCAAGTGTCTCATAGCCGAATTCTCCAAGTCGAAGAGTTGTCTTCAATCAATCCATGGACAGAGTGGACTTCTAAAGGATGAATGCTTGCCAGGAGATAACAGCCCAAGTACCCCCCTCCCTAAAGTTTTGGTTGACGGTCCTTATGGAGCACCAGCACAAGACTACAAACAATATGAGGTGGTTTTACTTGTGGGACTGGGAATTGGGGCTACCCCAATGATAAGCATAGTAAAGGACATATTGAATAATATCAAGGCGAAGGAAGAGGAGGAAAGGATCACTAATATGGAGGAGGGAACAATTGGTAAATCATCACAACACAAGAAAAGTGGGGTAATAAATGAGGTGGCTGAAGACGATCATCATAGGAAAGTAATTGAGATACACAGTCACTTGACTAGTGTATATGAAGACGGTGATGCTCGCTCTGCTCTTGTTACTGTCCTTCAATCACTAAGCCGTGCTAAAGATGGTCTGGATATCTTAAATGGAACGCCCATCAAGTCTTTCTTTGCACGACCCAATTGGCGCAGTGTCTTTAAGAGCATTGAATATAATCATCCAGGGAAACGCATTGAAGTTCCTGCAGATATAGAACTCGTTCAAAGAGTACATCGCAATGGTTCGCTTAGCAGAAGAAGAGGTAGGTCAAATTACAGCAGCATAGATGAAGAACAAGAAGCAGGAGATTATGTTGATGTCACTTTCGAAGTTCAAGGTGACTCTATTGCTTTACATGTTGAACCTGTGATTCGTTTAACTTCTTTCTCAAGACAAGTTGAAGTTGAAAAAGGGAAGTATGATAGGACTATGTCTGCTGCTTTTCATGCTCTCAAAGGACTCAAGTTTATCACTCAGAATGATGGTGATGCTGGATGGAAAAAGGTTGAGGATGAGTTTGATAGGCTTATTAAAGAAAAAGAAACAAATGATGGGTTGCTTCCTCGTGAGAAGTTTGCCGAATGCATAGGGATGAACGACAAGAAGTCTCAGAAATTTGCAGTTAAGCTTTTTGATGCTATTTCTAGGAGGAGGAATATTAATAGAGATTCAATCAATAAAGCTCAATTGAAAGATTGTTGGAACCAGATTTGTGACCACAATTTCGATTCTAGGCTCAGAATATTCTTTGACATGGTTGATAAAAATGCCGATGGCAGAATCGATAAGGAAGAAATTGAAGAGATTATTAGACTTAGTGCCAGTGCAAACAAACTCTCAAACATAGAGGATCGGGCAGAGGAATATGCTTCTTTGATCATGGAAGGACTGGACCCTCATGGCACAGGATTTATCATGGTAAAAGACCTTGAGGAACTATTGTTGCATGGACCACCAACTCATCCTGTAAGAGGAGAAAGTGTCATGTCTGGTCTATTTGCCTACAAATACATGCAGTATAGAAGAAAAGCTGCATATGAAGTGATGGGACATTGTGTGTGTATGGCTAAAGGTGCAGCTGAGACACTCAAATTGAACATGGCAATTATCTTGTTACCTGTTTGCCGAAACACCGTTACCTGGCTTAGGAACAAGACCAAGCTAGGTATTGCTGTTCCCTTTGACGACAACCTCAACTTTCACCAGATAATAGCTGTTGCAATAGCAATTGGAGTTGGTATACATGCTATTTATCATCTTGCTTGTGACTTTCCTAGTCTTATTCACGCGAATAGTGAAAAGTACGAGCTCATGGAACCATTTTTTGGAAAGCAAGCAACAAATTATTGGCATTTTGTGAAATCATGGGAAGGAGTAACAGGGATTGTAATGGTTGTTTTAATGACAATAGCCTTCACACTGGCTAGTCCTTGGTTAAGGAAAAGAACGACTTGGATGTATTTGGCTATTCCCATCATCATTTATGCATTGGAAAGACTGCATAGAGCACTCAAATCACGCATCAAGTCCGTTGATATATTGAAGGTGGTTGTTTATCCTGCAAATGTGTTGGCCCTTCGTATGTCAAAGCCTCAGAGGTTCAGATACAAAAGCGGACAATACATGTTTGTAAATTGTGCCGATGTCTCTCCATTGGAATGGCATCCATTTTCCATAACTTCCGCCCCAGGAGATGACTACCTTAGTGTTCACATCAGATCATTAGGTGACTGGACCAGAAGTCTCAGAGTCAAATTCTCAGAGGGTTGTAGTCCGGCAACTATTGGGCAGAGTGGAAAACTAAGAGCTGAATGCTTGCCGGGAGACACGCCTGCACAAGACTACAAACAATATGAGGTGGTTTTACTTGTGGGACTGGGAATTGGGGCTACCCCAATGATAAGTATAACAAAGGACATATTGAATAATATTAAGGCCAAGGAAGAGGAGGAAAGCATCAATAATATGGAGGAGGGAACAGGTGGTAGATCACCAAGACCATCACAACACAAGAAAACCGATCTGAGTAACTTTAAAACTAGAAAGGCTTATTTTTATTGGGTAATGAATGAGGTTGTTGAAGACGATCATCATAGGGGAGCGATTGAGCTCCACAATTACTGTACTAATGTTTATGAAAAGGGTGATGCTCGCTCTGCTCTTATTGCTATGCTTCAATCACTCGACCAAGCTAAAAATGGCGTGGATATCCTCACTGGAACACCCGTCCAGTCTCACTTTGGCAGACCCAATTGGCGTAGTGTCTACAAGCGCATTGCATATAATCATGAACAAACACGCGTTGGAGTGTTTTACTGTGGGCCACCGAAACCTATTAAAGAACATCGTGAACTAGCTTTGGAATTTTCTCAGAAGACAAGCACCAAATTTGATTTCCACAAGGAGAATTTCTAG

Protein sequence

>Msa0462410

MGADEIEEVSDNIELIGGGITERVPHNGSLSGRDSVSVEPLTGINDHGEDGKLDSLSKKLEKRRAHLKEVSKEMKRLNFISKAGGDDGWQKVYGEFRELTKETNGLLPRSKFGECIGMKNSEDFAEELLNVISKRRDIPLHGDTINEIDKDGDGRITKDEIEQIIILSASTNKLSSLKNHAEQYAALIMEELDPHETGYITKYDLEILLLHGPTHSTRGDRYLSEMLSMKLKGLFAYKFVQYRRKTAYQVMGHCVCMAKGAAETLKLNMAIILLPVCRNTVTWLRSKTKLGIVVPFNDNLNFHKVIAVAVAIGVGIHAIYHLACDFPSLLHANSEKYKLMEPFFGKQATNYWHFVKSWEGVTGIIMVEEPKTPNCLQPLLNSVTGFNVFWYTHHLFVFVYALLIVHGFKLYFTKEWYKKTTWMYLAIPVTVYALERLTRILRPRIKSVKILKAVVYRKDLKSPGDVLGLHVSKPEGFRYKSGQYMHPFSITSAPGDDYLSVHIKRNGDWTKCLIAEFSKSKSCLQSIHGQSGLLKDECLPGDNSPSTPLPKVLVDGPYGAPAQDYKQYEVVLLVGLGIGATPMISIVKDILNNIKAKEEEERITNMEEGTIGKSSQHKKSGVINEVAEDDHHRKVIEIHSHLTSVYEDGDARSALVTVLQSLSRAKDGLDILNGTPIKSFFARPNWRSVFKSIEYNHPGKRIEVPADIELVQRVHRNGSLSRRRGRSNYSSIDEEQEAGDYVDVTFEVQGDSIALHVEPVIRLTSFSRQVEVEKGKYDRTMSAAFHALKGLKFITQNDGDAGWKKVEDEFDRLIKEKETNDGLLPREKFAECIGMNDKKSQKFAVKLFDAISRRRNINRDSINKAQLKDCWNQICDHNFDSRLRIFFDMVDKNADGRIDKEEIEEIIRLSASANKLSNIEDRAEEYASLIMEGLDPHGTGFIMVKDLEELLLHGPPTHPVRGESVMSGLFAYKYMQYRRKAAYEVMGHCVCMAKGAAETLKLNMAIILLPVCRNTVTWLRNKTKLGIAVPFDDNLNFHQIIAVAIAIGVGIHAIYHLACDFPSLIHANSEKYELMEPFFGKQATNYWHFVKSWEGVTGIVMVVLMTIAFTLASPWLRKRTTWMYLAIPIIIYALERLHRALKSRIKSVDILKVVVYPANVLALRMSKPQRFRYKSGQYMFVNCADVSPLEWHPFSITSAPGDDYLSVHIRSLGDWTRSLRVKFSEGCSPATIGQSGKLRAECLPGDTPAQDYKQYEVVLLVGLGIGATPMISITKDILNNIKAKEEEESINNMEEGTGGRSPRPSQHKKTDLSNFKTRKAYFYWVMNEVVEDDHHRGAIELHNYCTNVYEKGDARSALIAMLQSLDQAKNGVDILTGTPVQSHFGRPNWRSVYKRIAYNHEQTRVGVFYCGPPKPIKEHRELALEFSQKTSTKFDFHKENF*