AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0120100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120100 MtrunA17_Chr1g0178341 95.213 188 9 0 3 190 4 191 3.09e-131 365
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120100 AT2G36145.1 62.162 148 50 3 46 190 41 185 2.38e-56 176

Find 95 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGTTATCTTGTTGGAAAT+TGG 0.165195 1_3:+44755346 Msa0120100:three_prime_UTR
ATTCGATTCCCTGCTCTTTC+AGG 0.177129 1_3:+44753826 Msa0120100:CDS
CATAAGGCTCCTCATGATTC+TGG 0.186944 1_3:-44755073 None:intergenic
TCAAAATACAAAGATTGTTT+TGG 0.243300 1_3:-44755289 None:intergenic
GTAGCTTCCCGCGGAAGCTT+TGG 0.275230 1_3:-44753735 None:intergenic
CTTCTGCCTAATGTACTTGC+AGG 0.280088 1_3:+44755151 Msa0120100:three_prime_UTR
TAGCTTCCCGCGGAAGCTTT+GGG 0.303187 1_3:-44753734 None:intergenic
TGTCTGGTCGCTTGGAAAAC+TGG 0.306117 1_3:-44755015 None:intergenic
AGATAATGCTTCATCTGTTC+AGG 0.308516 1_3:-44753449 None:intergenic
TCCCTTCTCCTACACAAGTA+TGG 0.324322 1_3:-44753529 None:intergenic
ATCTTTCATGCGCCCATGTC+TGG 0.333077 1_3:-44755031 None:intergenic
TAGAATGAAAGTTATCTTGT+TGG 0.343400 1_3:+44755339 Msa0120100:three_prime_UTR
TACCCGGTGGAGCAAGATTA+GGG 0.365827 1_3:+44754917 Msa0120100:CDS
CAGAATCATGAGGAGCCTTA+TGG 0.369861 1_3:+44755074 Msa0120100:CDS
GATTAGGGTTTATAGACATT+GGG 0.375229 1_3:+44754932 Msa0120100:CDS
TCTTGTGTATATTGACTGTT+TGG 0.377674 1_3:+44754966 Msa0120100:CDS
TGGCGGTAAGTGGTAGTATA+AGG 0.398680 1_3:+44753558 Msa0120100:CDS
ACTGGAGGAGAACTTTCATT+TGG 0.403885 1_3:-44754997 None:intergenic
TACTACAAGTGAGTTATGAT+TGG 0.404231 1_3:+44755243 Msa0120100:three_prime_UTR
TGCGCCCATGTCTGGTCGCT+TGG 0.407246 1_3:-44755023 None:intergenic
CGACGACGATGGAGTCTCTC+TGG 0.408665 1_3:+44753766 Msa0120100:CDS
ATACCCGGTGGAGCAAGATT+AGG 0.409412 1_3:+44754916 Msa0120100:CDS
GTGGGCAAACAGCCTTTGCC+AGG 0.419823 1_3:+44754058 Msa0120100:intron
AGTGTGCAGCTGAGAGGAAC+AGG 0.423390 1_3:+44753599 Msa0120100:CDS
ATAAGGCTCCTCATGATTCT+GGG 0.426970 1_3:-44755072 None:intergenic
TATGTTGACAGGCAGCTTCA+TGG 0.433103 1_3:-44753792 None:intergenic
AGGAAGCGGCTGCGAAGCAC+GGG 0.455528 1_3:-44753695 None:intergenic
AGATTAGGGTTTATAGACAT+TGG 0.474730 1_3:+44754931 Msa0120100:CDS
CTCTGAAGGTCTATGTTGAC+AGG 0.491476 1_3:-44753803 None:intergenic
GAGAATGGTGGGTGGTATTG+TGG 0.491715 1_3:-44753673 None:intergenic
TCAGGTTTACGTGGAACAAA+TGG 0.491897 1_3:-44753431 None:intergenic
AAACCCTAATCTTGCTCCAC+CGG 0.495626 1_3:-44754920 None:intergenic
GGCTGCGAAGCACGGGAGAA+TGG 0.496064 1_3:-44753688 None:intergenic
ACTACAAGTGAGTTATGATT+GGG 0.496582 1_3:+44755244 Msa0120100:three_prime_UTR
AAACACCCTGCAAGTACATT+AGG 0.502706 1_3:-44755157 None:intergenic
ATATATATACCTGAAAGAGC+AGG 0.507742 1_3:-44753835 None:intergenic
TATTGTGGTAATTAGAAATG+AGG 0.516080 1_3:-44753658 None:intergenic
CTCATGATTCTGGGCTCACC+CGG 0.516530 1_3:-44755063 None:intergenic
TCGCAGCCGCTTCCTTCTCA+CGG 0.523013 1_3:+44753703 Msa0120100:CDS
GCTGAGAAGGCAGAGGAACA+TGG 0.523707 1_3:-44753631 None:intergenic
GCGAAGCACGGGAGAATGGT+GGG 0.526904 1_3:-44753684 None:intergenic
AAGGAAGCGGCTGCGAAGCA+CGG 0.528983 1_3:-44753696 None:intergenic
AAAGTGGTAGACTGGCTCCC+TGG 0.531601 1_3:-44754076 None:intergenic
ACTTCTGAAGAGCTTCCATA+AGG 0.531730 1_3:-44755089 None:intergenic
GAGACTCCATCGTCGTCGGT+GGG 0.532066 1_3:-44753761 None:intergenic
CATGAAAGATAAGGTGCCGC+CGG 0.533196 1_3:+44755044 Msa0120100:CDS
AGGCGTGGAAAGTGGTAGAC+TGG 0.536072 1_3:-44754084 None:intergenic
TTCTGCCTAATGTACTTGCA+GGG 0.538754 1_3:+44755152 Msa0120100:three_prime_UTR
GAAATGAGGGAGTGCTGAGA+AGG 0.539560 1_3:-44753644 None:intergenic
GTAGACTGGCTCCCTGGCAA+AGG 0.542128 1_3:-44754070 None:intergenic
TGGGTGCCGCCACCGTGAGA+AGG 0.542868 1_3:-44753715 None:intergenic
ATTGTGGTAATTAGAAATGA+GGG 0.543828 1_3:-44753657 None:intergenic
CATAACTAATGTTGTATATG+TGG 0.547143 1_3:+44755313 Msa0120100:three_prime_UTR
GGGAAAGGCATGGCGGTAAG+TGG 0.549700 1_3:+44753548 Msa0120100:exon
AGAGACTCCATCGTCGTCGG+TGG 0.551810 1_3:-44753762 None:intergenic
CACCATACTTGTGTAGGAGA+AGG 0.552080 1_3:+44753527 Msa0120100:five_prime_UTR
GTTCAGATTGCCTCATTGTG+AGG 0.553621 1_3:+44755114 Msa0120100:CDS
ACCACTTTCCACGCCTCTCA+AGG 0.558258 1_3:+44754091 Msa0120100:CDS
AACCCTAATCTTGCTCCACC+GGG 0.559641 1_3:-44754919 None:intergenic
GGCGGCACCCAAAGCTTCCG+CGG 0.560842 1_3:+44753727 Msa0120100:CDS
ATGAAAGATAAGGTGCCGCC+GGG 0.567047 1_3:+44755045 Msa0120100:CDS
ACCTTGAGAGGCGTGGAAAG+TGG 0.572117 1_3:-44754092 None:intergenic
AGGGAGTGCTGAGAAGGCAG+AGG 0.573573 1_3:-44753638 None:intergenic
CCGCCACCGTGAGAAGGAAG+CGG 0.575152 1_3:-44753709 None:intergenic
CCGCTTCCTTCTCACGGTGG+CGG 0.575992 1_3:+44753709 Msa0120100:CDS
TGCGAAGCACGGGAGAATGG+TGG 0.579170 1_3:-44753685 None:intergenic
GCGGCACCCAAAGCTTCCGC+GGG 0.582964 1_3:+44753728 Msa0120100:CDS
ACATGGGCGCATGAAAGATA+AGG 0.585008 1_3:+44755035 Msa0120100:CDS
ACCATACTTGTGTAGGAGAA+GGG 0.586181 1_3:+44753528 Msa0120100:five_prime_UTR
ATTAGGGTTTATAGACATTG+GGG 0.590232 1_3:+44754933 Msa0120100:CDS
CTGAGAAGGCAGAGGAACAT+GGG 0.590908 1_3:-44753630 None:intergenic
TTATATATGTGTACCTTGAG+AGG 0.592519 1_3:-44754104 None:intergenic
GACGACGATGGAGTCTCTCT+GGG 0.598218 1_3:+44753767 Msa0120100:CDS
TGGGCAAACAGCCTTTGCCA+GGG 0.603588 1_3:+44754059 Msa0120100:CDS
AGACTCCATCGTCGTCGGTG+GGG 0.604451 1_3:-44753760 None:intergenic
CTGCAAGTACATTAGGCAGA+AGG 0.607099 1_3:-44755150 None:intergenic
TATATATACCTGAAAGAGCA+GGG 0.607634 1_3:-44753834 None:intergenic
CAGAGAGACTCCATCGTCGT+CGG 0.615294 1_3:-44753765 None:intergenic
AAACAGGTTGACAAAATACC+CGG 0.616364 1_3:+44754901 Msa0120100:intron
GCTACACACCATACTTGTGT+AGG 0.621822 1_3:+44753521 Msa0120100:five_prime_UTR
GCAGGGAATCGAATCTCTGA+AGG 0.624992 1_3:-44753817 None:intergenic
TACAGCCCCACCGACGACGA+TGG 0.636039 1_3:+44753755 Msa0120100:CDS
TGTAGGAGAAGGGAAAGGCA+TGG 0.654222 1_3:+44753538 Msa0120100:exon
TTCATCTGTTCAGGTTTACG+TGG 0.657420 1_3:-44753440 None:intergenic
GGTGGGGCTGTAGCTTCCCG+CGG 0.664372 1_3:-44753744 None:intergenic
CTGGTCGCTTGGAAAACTGG+AGG 0.670468 1_3:-44755012 None:intergenic
ACTTGTGTAGGAGAAGGGAA+AGG 0.684749 1_3:+44753533 Msa0120100:five_prime_UTR
TATGTGTACCTTGAGAGGCG+TGG 0.685226 1_3:-44754099 None:intergenic
ATGATTCTGGGCTCACCCGG+CGG 0.687233 1_3:-44755060 None:intergenic
TGCTTGAGTGTGCAGCTGAG+AGG 0.688346 1_3:+44753593 Msa0120100:CDS
CGGGTGAGCCCAGAATCATG+AGG 0.694987 1_3:+44755064 Msa0120100:CDS
CAGCCGCTTCCTTCTCACGG+TGG 0.696158 1_3:+44753706 Msa0120100:CDS
CAGGTTGACAAAATACCCGG+TGG 0.732626 1_3:+44754904 Msa0120100:intron
AAGCACGGGAGAATGGTGGG+TGG 0.747034 1_3:-44753681 None:intergenic
AGGAGAAGGGAAAGGCATGG+CGG 0.759081 1_3:+44753541 Msa0120100:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTATTTCGAGTAA+AGG - chr1_3:44753479-44753498 None:intergenic 15.0%
!! TATATTATACTACTATGTTT+AGG + chr1_3:44753853-44753872 Msa0120100:intron 15.0%
!! GTTAAATATAAGAATAATGT+TGG - chr1_3:44753969-44753988 None:intergenic 15.0%
!! ATAATTTAAATTCTCTAACT+AGG - chr1_3:44754358-44754377 None:intergenic 15.0%
!! TAGAGAATTTAAATTATAGT+TGG + chr1_3:44754361-44754380 Msa0120100:intron 15.0%
!!! ATTTATTTTATTTCGAGTAA+AGG - chr1_3:44753479-44753498 None:intergenic 15.0%
!! TATATTATACTACTATGTTT+AGG + chr1_3:44753853-44753872 Msa0120100:intron 15.0%
!! GTTAAATATAAGAATAATGT+TGG - chr1_3:44753969-44753988 None:intergenic 15.0%
!! ATAATTTAAATTCTCTAACT+AGG - chr1_3:44754358-44754377 None:intergenic 15.0%
!! TAGAGAATTTAAATTATAGT+TGG + chr1_3:44754361-44754380 Msa0120100:intron 15.0%
!! ATATAAGAATAATGTTGGTA+AGG - chr1_3:44753964-44753983 None:intergenic 20.0%
!!! CAATTTCAAGTTAAACTAAT+AGG - chr1_3:44754174-44754193 None:intergenic 20.0%
!!! ATTACTTCTAGCTTTATTTA+AGG + chr1_3:44754208-44754227 Msa0120100:intron 20.0%
!!! TAACACTGTGTTTTAAATAA+CGG + chr1_3:44754384-44754403 Msa0120100:intron 20.0%
!! TCATTTCAATTTGATAAAAC+AGG + chr1_3:44754885-44754904 Msa0120100:intron 20.0%
!!! CAAAATACAAAGATTGTTTT+GGG - chr1_3:44755291-44755310 None:intergenic 20.0%
!!! TCAAAATACAAAGATTGTTT+TGG - chr1_3:44755292-44755311 None:intergenic 20.0%
!! ATATAAGAATAATGTTGGTA+AGG - chr1_3:44753964-44753983 None:intergenic 20.0%
!!! CAATTTCAAGTTAAACTAAT+AGG - chr1_3:44754174-44754193 None:intergenic 20.0%
!!! ATTACTTCTAGCTTTATTTA+AGG + chr1_3:44754208-44754227 Msa0120100:intron 20.0%
!!! TAACACTGTGTTTTAAATAA+CGG + chr1_3:44754384-44754403 Msa0120100:intron 20.0%
!! TCATTTCAATTTGATAAAAC+AGG + chr1_3:44754885-44754904 Msa0120100:intron 20.0%
!!! CAAAATACAAAGATTGTTTT+GGG - chr1_3:44755291-44755310 None:intergenic 20.0%
!!! TCAAAATACAAAGATTGTTT+TGG - chr1_3:44755292-44755311 None:intergenic 20.0%
!!! ATTTTATTTCGAGTAAAGGT+AGG - chr1_3:44753475-44753494 None:intergenic 25.0%
! ATTGTGGTAATTAGAAATGA+GGG - chr1_3:44753660-44753679 None:intergenic 25.0%
! TATTGTGGTAATTAGAAATG+AGG - chr1_3:44753661-44753680 None:intergenic 25.0%
!! ATTATAAGTTTGTTCGTCAA+TGG - chr1_3:44754025-44754044 None:intergenic 25.0%
!! CAAACTTATAATTTGTGTTG+TGG + chr1_3:44754033-44754052 Msa0120100:intron 25.0%
! AACAATGAAATGCATTAACA+AGG - chr1_3:44754144-44754163 None:intergenic 25.0%
! GGAACTTAAAACAAATCAAA+TGG - chr1_3:44754262-44754281 None:intergenic 25.0%
!!! CATGATAATTTTTAAGTTGC+CGG - chr1_3:44754512-44754531 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr1_3:44754651-44754670 None:intergenic 25.0%
! CATTGAATAGTTAATGTATC+TGG - chr1_3:44754616-44754635 None:intergenic 25.0%
!! TAAGCAAAAAACAGCTTTTT+AGG - chr1_3:44754641-44754660 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+TGG + chr1_3:44754651-44754670 Msa0120100:intron 25.0%
! ATTAAAAAAACCTCACAATG+AGG - chr1_3:44755127-44755146 None:intergenic 25.0%
! CATAACTAATGTTGTATATG+TGG + chr1_3:44755313-44755332 Msa0120100:three_prime_UTR 25.0%
! TAGAATGAAAGTTATCTTGT+TGG + chr1_3:44755339-44755358 Msa0120100:three_prime_UTR 25.0%
! AAAGTTATCTTGTTGGAAAT+TGG + chr1_3:44755346-44755365 Msa0120100:three_prime_UTR 25.0%
!! TTTTCACAAGTTTCATGAAT+AGG + chr1_3:44755383-44755402 Msa0120100:three_prime_UTR 25.0%
! TTTCACAAGTTTCATGAATA+GGG + chr1_3:44755384-44755403 Msa0120100:three_prime_UTR 25.0%
!!! ATTTTATTTCGAGTAAAGGT+AGG - chr1_3:44753475-44753494 None:intergenic 25.0%
! ATTGTGGTAATTAGAAATGA+GGG - chr1_3:44753660-44753679 None:intergenic 25.0%
! TATTGTGGTAATTAGAAATG+AGG - chr1_3:44753661-44753680 None:intergenic 25.0%
!! ATTATAAGTTTGTTCGTCAA+TGG - chr1_3:44754025-44754044 None:intergenic 25.0%
!! CAAACTTATAATTTGTGTTG+TGG + chr1_3:44754033-44754052 Msa0120100:intron 25.0%
! AACAATGAAATGCATTAACA+AGG - chr1_3:44754144-44754163 None:intergenic 25.0%
! GGAACTTAAAACAAATCAAA+TGG - chr1_3:44754262-44754281 None:intergenic 25.0%
!!! CATGATAATTTTTAAGTTGC+CGG - chr1_3:44754512-44754531 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr1_3:44754651-44754670 None:intergenic 25.0%
! CATTGAATAGTTAATGTATC+TGG - chr1_3:44754616-44754635 None:intergenic 25.0%
!! TAAGCAAAAAACAGCTTTTT+AGG - chr1_3:44754641-44754660 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+TGG + chr1_3:44754651-44754670 Msa0120100:intron 25.0%
! ATTAAAAAAACCTCACAATG+AGG - chr1_3:44755127-44755146 None:intergenic 25.0%
! CATAACTAATGTTGTATATG+TGG + chr1_3:44755313-44755332 Msa0120100:three_prime_UTR 25.0%
! TAGAATGAAAGTTATCTTGT+TGG + chr1_3:44755339-44755358 Msa0120100:three_prime_UTR 25.0%
! AAAGTTATCTTGTTGGAAAT+TGG + chr1_3:44755346-44755365 Msa0120100:three_prime_UTR 25.0%
TATATATACCTGAAAGAGCA+GGG - chr1_3:44753837-44753856 None:intergenic 30.0%
ATATATATACCTGAAAGAGC+AGG - chr1_3:44753838-44753857 None:intergenic 30.0%
ATGTTGAAGAAACGCAATTT+AGG - chr1_3:44753894-44753913 None:intergenic 30.0%
TTATATATGTGTACCTTGAG+AGG - chr1_3:44754107-44754126 None:intergenic 30.0%
TGAAATGCATTAACAAGGAA+CGG - chr1_3:44754139-44754158 None:intergenic 30.0%
!! TGTGTTTTAAATAACGGTCA+TGG + chr1_3:44754390-44754409 Msa0120100:intron 30.0%
TCTTATTGTAGTGTAGTGTA+GGG - chr1_3:44754713-44754732 None:intergenic 30.0%
ATCTTATTGTAGTGTAGTGT+AGG - chr1_3:44754714-44754733 None:intergenic 30.0%
TACACTACACTACAATAAGA+TGG + chr1_3:44754713-44754732 Msa0120100:intron 30.0%
AGATTAGGGTTTATAGACAT+TGG + chr1_3:44754931-44754950 Msa0120100:CDS 30.0%
GATTAGGGTTTATAGACATT+GGG + chr1_3:44754932-44754951 Msa0120100:CDS 30.0%
ATTAGGGTTTATAGACATTG+GGG + chr1_3:44754933-44754952 Msa0120100:CDS 30.0%
! TCTTGTGTATATTGACTGTT+TGG + chr1_3:44754966-44754985 Msa0120100:CDS 30.0%
TACTACAAGTGAGTTATGAT+TGG + chr1_3:44755243-44755262 Msa0120100:three_prime_UTR 30.0%
ACTACAAGTGAGTTATGATT+GGG + chr1_3:44755244-44755263 Msa0120100:three_prime_UTR 30.0%
TATATATACCTGAAAGAGCA+GGG - chr1_3:44753837-44753856 None:intergenic 30.0%
ATATATATACCTGAAAGAGC+AGG - chr1_3:44753838-44753857 None:intergenic 30.0%
ATGTTGAAGAAACGCAATTT+AGG - chr1_3:44753894-44753913 None:intergenic 30.0%
TTATATATGTGTACCTTGAG+AGG - chr1_3:44754107-44754126 None:intergenic 30.0%
TGAAATGCATTAACAAGGAA+CGG - chr1_3:44754139-44754158 None:intergenic 30.0%
!! TGTGTTTTAAATAACGGTCA+TGG + chr1_3:44754390-44754409 Msa0120100:intron 30.0%
TCTTATTGTAGTGTAGTGTA+GGG - chr1_3:44754713-44754732 None:intergenic 30.0%
ATCTTATTGTAGTGTAGTGT+AGG - chr1_3:44754714-44754733 None:intergenic 30.0%
TACACTACACTACAATAAGA+TGG + chr1_3:44754713-44754732 Msa0120100:intron 30.0%
AGATTAGGGTTTATAGACAT+TGG + chr1_3:44754931-44754950 Msa0120100:CDS 30.0%
GATTAGGGTTTATAGACATT+GGG + chr1_3:44754932-44754951 Msa0120100:CDS 30.0%
ATTAGGGTTTATAGACATTG+GGG + chr1_3:44754933-44754952 Msa0120100:CDS 30.0%
! TCTTGTGTATATTGACTGTT+TGG + chr1_3:44754966-44754985 Msa0120100:CDS 30.0%
TACTACAAGTGAGTTATGAT+TGG + chr1_3:44755243-44755262 Msa0120100:three_prime_UTR 30.0%
ACTACAAGTGAGTTATGATT+GGG + chr1_3:44755244-44755263 Msa0120100:three_prime_UTR 30.0%
AGATAATGCTTCATCTGTTC+AGG - chr1_3:44753452-44753471 None:intergenic 35.0%
! TATAATTTGTGTTGTGGCAG+TGG + chr1_3:44754039-44754058 Msa0120100:intron 35.0%
! ATAATTTGTGTTGTGGCAGT+GGG + chr1_3:44754040-44754059 Msa0120100:intron 35.0%
GAAATGCATTAACAAGGAAC+GGG - chr1_3:44754138-44754157 None:intergenic 35.0%
TTGATACTCTTAGCTTCCTA+TGG + chr1_3:44754233-44754252 Msa0120100:intron 35.0%
ACAAATCAAATGGCTACCAT+AGG - chr1_3:44754252-44754271 None:intergenic 35.0%
AGCTATCTAGCATGAACTTA+AGG - chr1_3:44754283-44754302 None:intergenic 35.0%
!! AGTTGTGATCCTTGCTATTA+TGG + chr1_3:44754429-44754448 Msa0120100:intron 35.0%
CTTGATTCTCCATAATAGCA+AGG - chr1_3:44754441-44754460 None:intergenic 35.0%
!! CTTGCTATTATGGAGAATCA+AGG + chr1_3:44754439-44754458 Msa0120100:intron 35.0%
AAATTATCATGTACTCCCTC+CGG + chr1_3:44754521-44754540 Msa0120100:intron 35.0%
TTGCTTATAAATGTGACTGG+AGG + chr1_3:44754654-44754673 Msa0120100:intron 35.0%
TGCTTATAAATGTGACTGGA+GGG + chr1_3:44754655-44754674 Msa0120100:intron 35.0%
! AGCTTTTGTGACATTGTTCT+TGG - chr1_3:44754780-44754799 None:intergenic 35.0%
! AAACAGGTTGACAAAATACC+CGG + chr1_3:44754901-44754920 Msa0120100:intron 35.0%
AGATAATGCTTCATCTGTTC+AGG - chr1_3:44753452-44753471 None:intergenic 35.0%
! TATAATTTGTGTTGTGGCAG+TGG + chr1_3:44754039-44754058 Msa0120100:intron 35.0%
! ATAATTTGTGTTGTGGCAGT+GGG + chr1_3:44754040-44754059 Msa0120100:intron 35.0%
GAAATGCATTAACAAGGAAC+GGG - chr1_3:44754138-44754157 None:intergenic 35.0%
TTGATACTCTTAGCTTCCTA+TGG + chr1_3:44754233-44754252 Msa0120100:intron 35.0%
ACAAATCAAATGGCTACCAT+AGG - chr1_3:44754252-44754271 None:intergenic 35.0%
AGCTATCTAGCATGAACTTA+AGG - chr1_3:44754283-44754302 None:intergenic 35.0%
!! AGTTGTGATCCTTGCTATTA+TGG + chr1_3:44754429-44754448 Msa0120100:intron 35.0%
CTTGATTCTCCATAATAGCA+AGG - chr1_3:44754441-44754460 None:intergenic 35.0%
!! CTTGCTATTATGGAGAATCA+AGG + chr1_3:44754439-44754458 Msa0120100:intron 35.0%
AAATTATCATGTACTCCCTC+CGG + chr1_3:44754521-44754540 Msa0120100:intron 35.0%
TTGCTTATAAATGTGACTGG+AGG + chr1_3:44754654-44754673 Msa0120100:intron 35.0%
TGCTTATAAATGTGACTGGA+GGG + chr1_3:44754655-44754674 Msa0120100:intron 35.0%
! AGCTTTTGTGACATTGTTCT+TGG - chr1_3:44754780-44754799 None:intergenic 35.0%
! AAACAGGTTGACAAAATACC+CGG + chr1_3:44754901-44754920 Msa0120100:intron 35.0%
TCAGGTTTACGTGGAACAAA+TGG - chr1_3:44753434-44753453 None:intergenic 40.0%
! TTCATCTGTTCAGGTTTACG+TGG - chr1_3:44753443-44753462 None:intergenic 40.0%
ACCATACTTGTGTAGGAGAA+GGG + chr1_3:44753528-44753547 Msa0120100:five_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr1_3:44754539-44754558 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr1_3:44754540-44754559 None:intergenic 40.0%
GGTACATACTACTTAGCTGT+AGG - chr1_3:44754759-44754778 None:intergenic 40.0%
ACTGGAGGAGAACTTTCATT+TGG - chr1_3:44755000-44755019 None:intergenic 40.0%
ATAAGGCTCCTCATGATTCT+GGG - chr1_3:44755075-44755094 None:intergenic 40.0%
! ACTTCTGAAGAGCTTCCATA+AGG - chr1_3:44755092-44755111 None:intergenic 40.0%
TTCTGCCTAATGTACTTGCA+GGG + chr1_3:44755152-44755171 Msa0120100:three_prime_UTR 40.0%
AAACACCCTGCAAGTACATT+AGG - chr1_3:44755160-44755179 None:intergenic 40.0%
TCAGGTTTACGTGGAACAAA+TGG - chr1_3:44753434-44753453 None:intergenic 40.0%
! TTCATCTGTTCAGGTTTACG+TGG - chr1_3:44753443-44753462 None:intergenic 40.0%
ACCATACTTGTGTAGGAGAA+GGG + chr1_3:44753528-44753547 Msa0120100:five_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr1_3:44754539-44754558 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr1_3:44754540-44754559 None:intergenic 40.0%
GGTACATACTACTTAGCTGT+AGG - chr1_3:44754759-44754778 None:intergenic 40.0%
ACTGGAGGAGAACTTTCATT+TGG - chr1_3:44755000-44755019 None:intergenic 40.0%
ATAAGGCTCCTCATGATTCT+GGG - chr1_3:44755075-44755094 None:intergenic 40.0%
! ACTTCTGAAGAGCTTCCATA+AGG - chr1_3:44755092-44755111 None:intergenic 40.0%
TTCTGCCTAATGTACTTGCA+GGG + chr1_3:44755152-44755171 Msa0120100:three_prime_UTR 40.0%
AAACACCCTGCAAGTACATT+AGG - chr1_3:44755160-44755179 None:intergenic 40.0%
GCTACACACCATACTTGTGT+AGG + chr1_3:44753521-44753540 Msa0120100:five_prime_UTR 45.0%
CACCATACTTGTGTAGGAGA+AGG + chr1_3:44753527-44753546 Msa0120100:five_prime_UTR 45.0%
TCCCTTCTCCTACACAAGTA+TGG - chr1_3:44753532-44753551 None:intergenic 45.0%
ACTTGTGTAGGAGAAGGGAA+AGG + chr1_3:44753533-44753552 Msa0120100:five_prime_UTR 45.0%
TGGCGGTAAGTGGTAGTATA+AGG + chr1_3:44753558-44753577 Msa0120100:CDS 45.0%
TATGTTGACAGGCAGCTTCA+TGG - chr1_3:44753795-44753814 None:intergenic 45.0%
! CTCTGAAGGTCTATGTTGAC+AGG - chr1_3:44753806-44753825 None:intergenic 45.0%
ATTCGATTCCCTGCTCTTTC+AGG + chr1_3:44753826-44753845 Msa0120100:CDS 45.0%
AAACCCTAATCTTGCTCCAC+CGG - chr1_3:44754923-44754942 None:intergenic 45.0%
! TTTTCCAAGCGACCAGACAT+GGG + chr1_3:44755019-44755038 Msa0120100:CDS 45.0%
ACATGGGCGCATGAAAGATA+AGG + chr1_3:44755035-44755054 Msa0120100:CDS 45.0%
CATAAGGCTCCTCATGATTC+TGG - chr1_3:44755076-44755095 None:intergenic 45.0%
CAGAATCATGAGGAGCCTTA+TGG + chr1_3:44755074-44755093 Msa0120100:CDS 45.0%
GTTCAGATTGCCTCATTGTG+AGG + chr1_3:44755114-44755133 Msa0120100:CDS 45.0%
CTGCAAGTACATTAGGCAGA+AGG - chr1_3:44755153-44755172 None:intergenic 45.0%
CTTCTGCCTAATGTACTTGC+AGG + chr1_3:44755151-44755170 Msa0120100:three_prime_UTR 45.0%
GCTACACACCATACTTGTGT+AGG + chr1_3:44753521-44753540 Msa0120100:five_prime_UTR 45.0%
CACCATACTTGTGTAGGAGA+AGG + chr1_3:44753527-44753546 Msa0120100:five_prime_UTR 45.0%
TCCCTTCTCCTACACAAGTA+TGG - chr1_3:44753532-44753551 None:intergenic 45.0%
ACTTGTGTAGGAGAAGGGAA+AGG + chr1_3:44753533-44753552 Msa0120100:five_prime_UTR 45.0%
TGGCGGTAAGTGGTAGTATA+AGG + chr1_3:44753558-44753577 Msa0120100:CDS 45.0%
TATGTTGACAGGCAGCTTCA+TGG - chr1_3:44753795-44753814 None:intergenic 45.0%
! CTCTGAAGGTCTATGTTGAC+AGG - chr1_3:44753806-44753825 None:intergenic 45.0%
ATTCGATTCCCTGCTCTTTC+AGG + chr1_3:44753826-44753845 Msa0120100:CDS 45.0%
AAACCCTAATCTTGCTCCAC+CGG - chr1_3:44754923-44754942 None:intergenic 45.0%
! TTTTCCAAGCGACCAGACAT+GGG + chr1_3:44755019-44755038 Msa0120100:CDS 45.0%
ACATGGGCGCATGAAAGATA+AGG + chr1_3:44755035-44755054 Msa0120100:CDS 45.0%
CATAAGGCTCCTCATGATTC+TGG - chr1_3:44755076-44755095 None:intergenic 45.0%
CAGAATCATGAGGAGCCTTA+TGG + chr1_3:44755074-44755093 Msa0120100:CDS 45.0%
GTTCAGATTGCCTCATTGTG+AGG + chr1_3:44755114-44755133 Msa0120100:CDS 45.0%
CTGCAAGTACATTAGGCAGA+AGG - chr1_3:44755153-44755172 None:intergenic 45.0%
CTTCTGCCTAATGTACTTGC+AGG + chr1_3:44755151-44755170 Msa0120100:three_prime_UTR 45.0%
TGTAGGAGAAGGGAAAGGCA+TGG + chr1_3:44753538-44753557 Msa0120100:exon 50.0%
CTGAGAAGGCAGAGGAACAT+GGG - chr1_3:44753633-44753652 None:intergenic 50.0%
!! GAAATGAGGGAGTGCTGAGA+AGG - chr1_3:44753647-44753666 None:intergenic 50.0%
!! GAGAATGGTGGGTGGTATTG+TGG - chr1_3:44753676-44753695 None:intergenic 50.0%
GCAGGGAATCGAATCTCTGA+AGG - chr1_3:44753820-44753839 None:intergenic 50.0%
TATGTGTACCTTGAGAGGCG+TGG - chr1_3:44754102-44754121 None:intergenic 50.0%
TTGTAATGCCACCCCGATTG+AGG - chr1_3:44754487-44754506 None:intergenic 50.0%
TCGGGGTGGCATTACAATTC+CGG + chr1_3:44754490-44754509 Msa0120100:intron 50.0%
! CAGGTTGACAAAATACCCGG+TGG + chr1_3:44754904-44754923 Msa0120100:intron 50.0%
ATACCCGGTGGAGCAAGATT+AGG + chr1_3:44754916-44754935 Msa0120100:CDS 50.0%
TACCCGGTGGAGCAAGATTA+GGG + chr1_3:44754917-44754936 Msa0120100:CDS 50.0%
AACCCTAATCTTGCTCCACC+GGG - chr1_3:44754922-44754941 None:intergenic 50.0%
TGTCTGGTCGCTTGGAAAAC+TGG - chr1_3:44755018-44755037 None:intergenic 50.0%
! GTTTTCCAAGCGACCAGACA+TGG + chr1_3:44755018-44755037 Msa0120100:CDS 50.0%
ATCTTTCATGCGCCCATGTC+TGG - chr1_3:44755034-44755053 None:intergenic 50.0%
!! CATGAAAGATAAGGTGCCGC+CGG + chr1_3:44755044-44755063 Msa0120100:CDS 50.0%
!! ATGAAAGATAAGGTGCCGCC+GGG + chr1_3:44755045-44755064 Msa0120100:CDS 50.0%
TGTAGGAGAAGGGAAAGGCA+TGG + chr1_3:44753538-44753557 Msa0120100:exon 50.0%
CTGAGAAGGCAGAGGAACAT+GGG - chr1_3:44753633-44753652 None:intergenic 50.0%
!! GAAATGAGGGAGTGCTGAGA+AGG - chr1_3:44753647-44753666 None:intergenic 50.0%
!! GAGAATGGTGGGTGGTATTG+TGG - chr1_3:44753676-44753695 None:intergenic 50.0%
GCAGGGAATCGAATCTCTGA+AGG - chr1_3:44753820-44753839 None:intergenic 50.0%
TATGTGTACCTTGAGAGGCG+TGG - chr1_3:44754102-44754121 None:intergenic 50.0%
TTGTAATGCCACCCCGATTG+AGG - chr1_3:44754487-44754506 None:intergenic 50.0%
TCGGGGTGGCATTACAATTC+CGG + chr1_3:44754490-44754509 Msa0120100:intron 50.0%
! CAGGTTGACAAAATACCCGG+TGG + chr1_3:44754904-44754923 Msa0120100:intron 50.0%
ATACCCGGTGGAGCAAGATT+AGG + chr1_3:44754916-44754935 Msa0120100:CDS 50.0%
TACCCGGTGGAGCAAGATTA+GGG + chr1_3:44754917-44754936 Msa0120100:CDS 50.0%
AACCCTAATCTTGCTCCACC+GGG - chr1_3:44754922-44754941 None:intergenic 50.0%
TGTCTGGTCGCTTGGAAAAC+TGG - chr1_3:44755018-44755037 None:intergenic 50.0%
! GTTTTCCAAGCGACCAGACA+TGG + chr1_3:44755018-44755037 Msa0120100:CDS 50.0%
ATCTTTCATGCGCCCATGTC+TGG - chr1_3:44755034-44755053 None:intergenic 50.0%
!! CATGAAAGATAAGGTGCCGC+CGG + chr1_3:44755044-44755063 Msa0120100:CDS 50.0%
!! ATGAAAGATAAGGTGCCGCC+GGG + chr1_3:44755045-44755064 Msa0120100:CDS 50.0%
! AGGAGAAGGGAAAGGCATGG+CGG + chr1_3:44753541-44753560 Msa0120100:exon 55.0%
TGCTTGAGTGTGCAGCTGAG+AGG + chr1_3:44753593-44753612 Msa0120100:CDS 55.0%
AGTGTGCAGCTGAGAGGAAC+AGG + chr1_3:44753599-44753618 Msa0120100:CDS 55.0%
GCTGAGAAGGCAGAGGAACA+TGG - chr1_3:44753634-44753653 None:intergenic 55.0%
TAGCTTCCCGCGGAAGCTTT+GGG - chr1_3:44753737-44753756 None:intergenic 55.0%
CAGAGAGACTCCATCGTCGT+CGG - chr1_3:44753768-44753787 None:intergenic 55.0%
GACGACGATGGAGTCTCTCT+GGG + chr1_3:44753767-44753786 Msa0120100:CDS 55.0%
TGGGCAAACAGCCTTTGCCA+GGG + chr1_3:44754059-44754078 Msa0120100:CDS 55.0%
! AAAGTGGTAGACTGGCTCCC+TGG - chr1_3:44754079-44754098 None:intergenic 55.0%
AGGCGTGGAAAGTGGTAGAC+TGG - chr1_3:44754087-44754106 None:intergenic 55.0%
ACCACTTTCCACGCCTCTCA+AGG + chr1_3:44754091-44754110 Msa0120100:CDS 55.0%
! ACCTTGAGAGGCGTGGAAAG+TGG - chr1_3:44754095-44754114 None:intergenic 55.0%
GCAGCCAATGCAGCCTCAAT+CGG + chr1_3:44754471-44754490 Msa0120100:intron 55.0%
CAGCCAATGCAGCCTCAATC+GGG + chr1_3:44754472-44754491 Msa0120100:intron 55.0%
AGCCAATGCAGCCTCAATCG+GGG + chr1_3:44754473-44754492 Msa0120100:intron 55.0%
CTGGTCGCTTGGAAAACTGG+AGG - chr1_3:44755015-44755034 None:intergenic 55.0%
CTCATGATTCTGGGCTCACC+CGG - chr1_3:44755066-44755085 None:intergenic 55.0%
! AGGAGAAGGGAAAGGCATGG+CGG + chr1_3:44753541-44753560 Msa0120100:exon 55.0%
TGCTTGAGTGTGCAGCTGAG+AGG + chr1_3:44753593-44753612 Msa0120100:CDS 55.0%
AGTGTGCAGCTGAGAGGAAC+AGG + chr1_3:44753599-44753618 Msa0120100:CDS 55.0%
GCTGAGAAGGCAGAGGAACA+TGG - chr1_3:44753634-44753653 None:intergenic 55.0%
TAGCTTCCCGCGGAAGCTTT+GGG - chr1_3:44753737-44753756 None:intergenic 55.0%
CAGAGAGACTCCATCGTCGT+CGG - chr1_3:44753768-44753787 None:intergenic 55.0%
GACGACGATGGAGTCTCTCT+GGG + chr1_3:44753767-44753786 Msa0120100:CDS 55.0%
TGGGCAAACAGCCTTTGCCA+GGG + chr1_3:44754059-44754078 Msa0120100:CDS 55.0%
! AAAGTGGTAGACTGGCTCCC+TGG - chr1_3:44754079-44754098 None:intergenic 55.0%
AGGCGTGGAAAGTGGTAGAC+TGG - chr1_3:44754087-44754106 None:intergenic 55.0%
ACCACTTTCCACGCCTCTCA+AGG + chr1_3:44754091-44754110 Msa0120100:CDS 55.0%
! ACCTTGAGAGGCGTGGAAAG+TGG - chr1_3:44754095-44754114 None:intergenic 55.0%
GCAGCCAATGCAGCCTCAAT+CGG + chr1_3:44754471-44754490 Msa0120100:intron 55.0%
CAGCCAATGCAGCCTCAATC+GGG + chr1_3:44754472-44754491 Msa0120100:intron 55.0%
AGCCAATGCAGCCTCAATCG+GGG + chr1_3:44754473-44754492 Msa0120100:intron 55.0%
CTGGTCGCTTGGAAAACTGG+AGG - chr1_3:44755015-44755034 None:intergenic 55.0%
CTCATGATTCTGGGCTCACC+CGG - chr1_3:44755066-44755085 None:intergenic 55.0%
! GGGAAAGGCATGGCGGTAAG+TGG + chr1_3:44753548-44753567 Msa0120100:exon 60.0%
!! AGGGAGTGCTGAGAAGGCAG+AGG - chr1_3:44753641-44753660 None:intergenic 60.0%
! AAGCACGGGAGAATGGTGGG+TGG - chr1_3:44753684-44753703 None:intergenic 60.0%
GCGAAGCACGGGAGAATGGT+GGG - chr1_3:44753687-44753706 None:intergenic 60.0%
TGCGAAGCACGGGAGAATGG+TGG - chr1_3:44753688-44753707 None:intergenic 60.0%
AAGGAAGCGGCTGCGAAGCA+CGG - chr1_3:44753699-44753718 None:intergenic 60.0%
TCGCAGCCGCTTCCTTCTCA+CGG + chr1_3:44753703-44753722 Msa0120100:CDS 60.0%
GTAGCTTCCCGCGGAAGCTT+TGG - chr1_3:44753738-44753757 None:intergenic 60.0%
AGACTCCATCGTCGTCGGTG+GGG - chr1_3:44753763-44753782 None:intergenic 60.0%
GAGACTCCATCGTCGTCGGT+GGG - chr1_3:44753764-44753783 None:intergenic 60.0%
AGAGACTCCATCGTCGTCGG+TGG - chr1_3:44753765-44753784 None:intergenic 60.0%
CGACGACGATGGAGTCTCTC+TGG + chr1_3:44753766-44753785 Msa0120100:CDS 60.0%
GTGGGCAAACAGCCTTTGCC+AGG + chr1_3:44754058-44754077 Msa0120100:intron 60.0%
! GTAGACTGGCTCCCTGGCAA+AGG - chr1_3:44754073-44754092 None:intergenic 60.0%
CACCCCGATTGAGGCTGCAT+TGG - chr1_3:44754478-44754497 None:intergenic 60.0%
CAATGCAGCCTCAATCGGGG+TGG + chr1_3:44754476-44754495 Msa0120100:intron 60.0%
ATGATTCTGGGCTCACCCGG+CGG - chr1_3:44755063-44755082 None:intergenic 60.0%
CGGGTGAGCCCAGAATCATG+AGG + chr1_3:44755064-44755083 Msa0120100:CDS 60.0%
! GGGAAAGGCATGGCGGTAAG+TGG + chr1_3:44753548-44753567 Msa0120100:exon 60.0%
!! AGGGAGTGCTGAGAAGGCAG+AGG - chr1_3:44753641-44753660 None:intergenic 60.0%
! AAGCACGGGAGAATGGTGGG+TGG - chr1_3:44753684-44753703 None:intergenic 60.0%
GCGAAGCACGGGAGAATGGT+GGG - chr1_3:44753687-44753706 None:intergenic 60.0%
TGCGAAGCACGGGAGAATGG+TGG - chr1_3:44753688-44753707 None:intergenic 60.0%
AAGGAAGCGGCTGCGAAGCA+CGG - chr1_3:44753699-44753718 None:intergenic 60.0%
TCGCAGCCGCTTCCTTCTCA+CGG + chr1_3:44753703-44753722 Msa0120100:CDS 60.0%
GTAGCTTCCCGCGGAAGCTT+TGG - chr1_3:44753738-44753757 None:intergenic 60.0%
AGACTCCATCGTCGTCGGTG+GGG - chr1_3:44753763-44753782 None:intergenic 60.0%
GAGACTCCATCGTCGTCGGT+GGG - chr1_3:44753764-44753783 None:intergenic 60.0%
AGAGACTCCATCGTCGTCGG+TGG - chr1_3:44753765-44753784 None:intergenic 60.0%
CGACGACGATGGAGTCTCTC+TGG + chr1_3:44753766-44753785 Msa0120100:CDS 60.0%
GTGGGCAAACAGCCTTTGCC+AGG + chr1_3:44754058-44754077 Msa0120100:intron 60.0%
! GTAGACTGGCTCCCTGGCAA+AGG - chr1_3:44754073-44754092 None:intergenic 60.0%
CACCCCGATTGAGGCTGCAT+TGG - chr1_3:44754478-44754497 None:intergenic 60.0%
CAATGCAGCCTCAATCGGGG+TGG + chr1_3:44754476-44754495 Msa0120100:intron 60.0%
ATGATTCTGGGCTCACCCGG+CGG - chr1_3:44755063-44755082 None:intergenic 60.0%
CGGGTGAGCCCAGAATCATG+AGG + chr1_3:44755064-44755083 Msa0120100:CDS 60.0%
GGCTGCGAAGCACGGGAGAA+TGG - chr1_3:44753691-44753710 None:intergenic 65.0%
AGGAAGCGGCTGCGAAGCAC+GGG - chr1_3:44753698-44753717 None:intergenic 65.0%
CAGCCGCTTCCTTCTCACGG+TGG + chr1_3:44753706-44753725 Msa0120100:CDS 65.0%
CCGCCACCGTGAGAAGGAAG+CGG - chr1_3:44753712-44753731 None:intergenic 65.0%
CCGCTTCCTTCTCACGGTGG+CGG + chr1_3:44753709-44753728 Msa0120100:CDS 65.0%
TACAGCCCCACCGACGACGA+TGG + chr1_3:44753755-44753774 Msa0120100:CDS 65.0%
TGCGCCCATGTCTGGTCGCT+TGG - chr1_3:44755026-44755045 None:intergenic 65.0%
GGCTGCGAAGCACGGGAGAA+TGG - chr1_3:44753691-44753710 None:intergenic 65.0%
AGGAAGCGGCTGCGAAGCAC+GGG - chr1_3:44753698-44753717 None:intergenic 65.0%
CAGCCGCTTCCTTCTCACGG+TGG + chr1_3:44753706-44753725 Msa0120100:CDS 65.0%
CCGCCACCGTGAGAAGGAAG+CGG - chr1_3:44753712-44753731 None:intergenic 65.0%
CCGCTTCCTTCTCACGGTGG+CGG + chr1_3:44753709-44753728 Msa0120100:CDS 65.0%
TACAGCCCCACCGACGACGA+TGG + chr1_3:44753755-44753774 Msa0120100:CDS 65.0%
TGCGCCCATGTCTGGTCGCT+TGG - chr1_3:44755026-44755045 None:intergenic 65.0%
! TGGGTGCCGCCACCGTGAGA+AGG - chr1_3:44753718-44753737 None:intergenic 70.0%
GGCGGCACCCAAAGCTTCCG+CGG + chr1_3:44753727-44753746 Msa0120100:CDS 70.0%
GCGGCACCCAAAGCTTCCGC+GGG + chr1_3:44753728-44753747 Msa0120100:CDS 70.0%
GGTGGGGCTGTAGCTTCCCG+CGG - chr1_3:44753747-44753766 None:intergenic 70.0%
! TGGGTGCCGCCACCGTGAGA+AGG - chr1_3:44753718-44753737 None:intergenic 70.0%
GGCGGCACCCAAAGCTTCCG+CGG + chr1_3:44753727-44753746 Msa0120100:CDS 70.0%
GCGGCACCCAAAGCTTCCGC+GGG + chr1_3:44753728-44753747 Msa0120100:CDS 70.0%
GGTGGGGCTGTAGCTTCCCG+CGG - chr1_3:44753747-44753766 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 44753417 44755403 44753417 ID=Msa0120100;Name=Msa0120100
chr1_3 mRNA 44753417 44755403 44753417 ID=Msa0120100-mRNA-1;Parent=Msa0120100;Name=Msa0120100-mRNA-1;_AED=0.00;_eAED=0.00;_QI=140|1|1|1|1|1|3|269|190
chr1_3 exon 44753417 44753847 44753417 ID=Msa0120100-mRNA-1:exon:13320;Parent=Msa0120100-mRNA-1
chr1_3 exon 44754059 44754112 44754059 ID=Msa0120100-mRNA-1:exon:13321;Parent=Msa0120100-mRNA-1
chr1_3 exon 44754907 44755403 44754907 ID=Msa0120100-mRNA-1:exon:13322;Parent=Msa0120100-mRNA-1
chr1_3 five_prime_UTR 44753417 44753556 44753417 ID=Msa0120100-mRNA-1:five_prime_utr;Parent=Msa0120100-mRNA-1
chr1_3 CDS 44753557 44753847 44753557 ID=Msa0120100-mRNA-1:cds;Parent=Msa0120100-mRNA-1
chr1_3 CDS 44754059 44754112 44754059 ID=Msa0120100-mRNA-1:cds;Parent=Msa0120100-mRNA-1
chr1_3 CDS 44754907 44755134 44754907 ID=Msa0120100-mRNA-1:cds;Parent=Msa0120100-mRNA-1
chr1_3 three_prime_UTR 44755135 44755403 44755135 ID=Msa0120100-mRNA-1:three_prime_utr;Parent=Msa0120100-mRNA-1
Gene Sequence

>Msa0120100

ATGGCGGTAAGTGGTAGTATAAGGCAGCAGAGTTTATGCTTGAGTGTGCAGCTGAGAGGAACAGGACTGAATTCCCATGTTCCTCTGCCTTCTCAGCACTCCCTCATTTCTAATTACCACAATACCACCCACCATTCTCCCGTGCTTCGCAGCCGCTTCCTTCTCACGGTGGCGGCACCCAAAGCTTCCGCGGGAAGCTACAGCCCCACCGACGACGATGGAGTCTCTCTGGGCACCATGAAGCTGCCTGTCAACATAGACCTTCAGAGATTCGATTCCCTGCTCTTTCAGTGGGCAAACAGCCTTTGCCAGGGAGCCAGTCTACCACTTTCCACGCCTCTCAAGGTTGACAAAATACCCGGTGGAGCAAGATTAGGGTTTATAGACATTGGGGAAACAGAAGTTCTTGTGTATATTGACTGTTTGGTTTTTAAACCAAATGAAAGTTCTCCTCCAGTTTTCCAAGCGACCAGACATGGGCGCATGAAAGATAAGGTGCCGCCGGGTGAGCCCAGAATCATGAGGAGCCTTATGGAAGCTCTTCAGAAGTCAGTTCAGATTGCCTCATTGTGA

Protein sequence

>Msa0120100

MAVSGSIRQQSLCLSVQLRGTGLNSHVPLPSQHSLISNYHNTTHHSPVLRSRFLLTVAAPKASAGSYSPTDDDGVSLGTMKLPVNIDLQRFDSLLFQWANSLCQGASLPLSTPLKVDKIPGGARLGFIDIGETEVLVYIDCLVFKPNESSPPVFQATRHGRMKDKVPPGEPRIMRSLMEALQKSVQIASL*