Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107240 | XP_013466771.1 | 95.050 | 606 | 23 | 3 | 1 | 605 | 1 | 600 | 0.0 | 1184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107240 | A0A072VGA5 | 95.050 | 606 | 23 | 3 | 1 | 605 | 1 | 600 | 0.0 | 1184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003630 | Msa0107240 | 0.802290 | 6.016664e-49 | -8.615850e-47 |
| Msa0023330 | Msa0107240 | 0.803754 | 2.997786e-49 | -8.615850e-47 |
| Msa0026910 | Msa0107240 | 0.846499 | 2.090124e-59 | -8.615850e-47 |
| Msa0030300 | Msa0107240 | 0.801615 | 8.280759e-49 | -8.615850e-47 |
| Msa0031180 | Msa0107240 | 0.802545 | 5.331311e-49 | -8.615850e-47 |
| Msa0042550 | Msa0107240 | 0.819726 | 9.983959e-53 | -8.615850e-47 |
| Msa0043500 | Msa0107240 | 0.801284 | 9.682225e-49 | -8.615850e-47 |
| Msa0043980 | Msa0107240 | 0.810145 | 1.332943e-50 | -8.615850e-47 |
| Msa0056450 | Msa0107240 | 0.808629 | 2.818906e-50 | -8.615850e-47 |
| Msa0058310 | Msa0107240 | 0.811012 | 8.661622e-51 | -8.615850e-47 |
| Msa0058600 | Msa0107240 | 0.802281 | 6.044419e-49 | -8.615850e-47 |
| Msa0081650 | Msa0107240 | 0.828093 | 1.088642e-54 | -8.615850e-47 |
| Msa0086420 | Msa0107240 | 0.800396 | 1.469745e-48 | -8.615850e-47 |
| Msa0092410 | Msa0107240 | 0.811519 | 6.722949e-51 | -8.615850e-47 |
| Msa0100160 | Msa0107240 | 0.807730 | 4.382909e-50 | -8.615850e-47 |
| Msa0103250 | Msa0107240 | 0.802657 | 5.056006e-49 | -8.615850e-47 |
| Msa0104230 | Msa0107240 | 0.805199 | 1.498252e-49 | -8.615850e-47 |
| Msa0106710 | Msa0107240 | 0.800431 | 1.445623e-48 | -8.615850e-47 |
| Msa0107240 | Msa0107270 | 0.870349 | 1.560699e-66 | -8.615850e-47 |
| Msa0107240 | Msa0111080 | 0.830044 | 3.665913e-55 | -8.615850e-47 |
| Msa0107240 | Msa0131330 | 0.802774 | 4.782355e-49 | -8.615850e-47 |
| Msa0107240 | Msa0138020 | 0.829145 | 6.063941e-55 | -8.615850e-47 |
| Msa0107240 | Msa0138640 | 0.806228 | 9.110010e-50 | -8.615850e-47 |
| Msa0107240 | Msa0154920 | 0.820665 | 6.082635e-53 | -8.615850e-47 |
| Msa0107240 | Msa0174390 | 0.829465 | 5.070602e-55 | -8.615850e-47 |
| Msa0107240 | Msa0178510 | 0.825121 | 5.570793e-54 | -8.615850e-47 |
| Msa0107240 | Msa0187830 | 0.801019 | 1.097066e-48 | -8.615850e-47 |
| Msa0107240 | Msa0197610 | 0.811742 | 6.012574e-51 | -8.615850e-47 |
| Msa0107240 | Msa0206010 | 0.805791 | 1.125570e-49 | -8.615850e-47 |
| Msa0107240 | Msa0217700 | 0.815020 | 1.145095e-51 | -8.615850e-47 |
| Msa0107240 | Msa0218350 | 0.805086 | 1.581938e-49 | -8.615850e-47 |
| Msa0107240 | Msa0225670 | 0.814946 | 1.189007e-51 | -8.615850e-47 |
| Msa0107240 | Msa0233370 | 0.809585 | 1.759832e-50 | -8.615850e-47 |
| Msa0107240 | Msa0239800 | 0.803004 | 4.286507e-49 | -8.615850e-47 |
| Msa0107240 | Msa0241140 | 0.816688 | 4.862103e-52 | -8.615850e-47 |
| Msa0107240 | Msa0269560 | 0.801745 | 7.788271e-49 | -8.615850e-47 |
| Msa0107240 | Msa0278580 | 0.802622 | 5.140016e-49 | -8.615850e-47 |
| Msa0107240 | Msa0281480 | 0.810339 | 1.210717e-50 | -8.615850e-47 |
| Msa0107240 | Msa0287410 | 0.805238 | 1.470118e-49 | -8.615850e-47 |
| Msa0107240 | Msa0290760 | 0.817100 | 3.928132e-52 | -8.615850e-47 |
| Msa0107240 | Msa0307310 | 0.801149 | 1.032034e-48 | -8.615850e-47 |
| Msa0107240 | Msa0310440 | 0.805700 | 1.176416e-49 | -8.615850e-47 |
| Msa0107240 | Msa0317510 | 0.804651 | 1.950393e-49 | -8.615850e-47 |
| Msa0107240 | Msa0317970 | 0.804267 | 2.345087e-49 | -8.615850e-47 |
| Msa0107240 | Msa0321080 | 0.801128 | 1.042190e-48 | -8.615850e-47 |
| Msa0107240 | Msa0322680 | 0.809704 | 1.658617e-50 | -8.615850e-47 |
| Msa0107240 | Msa0326110 | 0.806337 | 8.640903e-50 | -8.615850e-47 |
| Msa0107240 | Msa0347750 | 0.813343 | 2.685509e-51 | -8.615850e-47 |
| Msa0107240 | Msa0347950 | 0.807284 | 5.448658e-50 | -8.615850e-47 |
| Msa0107240 | Msa0371950 | 0.804857 | 1.766083e-49 | -8.615850e-47 |
| Msa0107240 | Msa0376910 | 0.807580 | 4.716271e-50 | -8.615850e-47 |
| Msa0107240 | Msa0378970 | 0.813611 | 2.345048e-51 | -8.615850e-47 |
| Msa0107240 | Msa0381610 | -0.802080 | 6.646291e-49 | -8.615850e-47 |
| Msa0107240 | Msa0387050 | 0.808651 | 2.789569e-50 | -8.615850e-47 |
| Msa0107240 | Msa0392270 | 0.800672 | 1.291577e-48 | -8.615850e-47 |
| Msa0107240 | Msa0394260 | 0.803181 | 3.940754e-49 | -8.615850e-47 |
| Msa0107240 | Msa0394470 | 0.807976 | 3.884407e-50 | -8.615850e-47 |
| Msa0107240 | Msa0408300 | 0.815601 | 8.502858e-52 | -8.615850e-47 |
| Msa0107240 | Msa0410300 | 0.807080 | 6.018238e-50 | -8.615850e-47 |
| Msa0107240 | Msa0417330 | 0.830603 | 2.675304e-55 | -8.615850e-47 |
| Msa0107240 | Msa0422180 | 0.814298 | 1.654702e-51 | -8.615850e-47 |
| Msa0107240 | Msa0435220 | 0.807475 | 4.963730e-50 | -8.615850e-47 |
| Msa0107240 | Msa0464120 | 0.801094 | 1.058707e-48 | -8.615850e-47 |
| Msa0107240 | Msa0468320 | 0.814872 | 1.235017e-51 | -8.615850e-47 |
| Msa0107240 | Msa0471900 | 0.805498 | 1.296568e-49 | -8.615850e-47 |
| Msa0107240 | Msa0474940 | 0.805478 | 1.309482e-49 | -8.615850e-47 |
| Msa0107240 | Msa0480780 | 0.816584 | 5.128406e-52 | -8.615850e-47 |
| Msa0107240 | Msa0481280 | 0.825144 | 5.500130e-54 | -8.615850e-47 |
| Msa0107240 | Msa0485490 | 0.808777 | 2.621643e-50 | -8.615850e-47 |
| Msa0107240 | Msa0510930 | 0.807536 | 4.818578e-50 | -8.615850e-47 |
| Msa0107240 | Msa0517090 | 0.820926 | 5.297189e-53 | -8.615850e-47 |
| Msa0107240 | Msa0518380 | 0.806323 | 8.699221e-50 | -8.615850e-47 |
| Msa0107240 | Msa0518440 | 0.817808 | 2.721521e-52 | -8.615850e-47 |
| Msa0107240 | Msa0521670 | 0.803842 | 2.873967e-49 | -8.615850e-47 |
| Msa0107240 | Msa0532980 | 0.813705 | 2.235371e-51 | -8.615850e-47 |
| Msa0107240 | Msa0541040 | 0.803937 | 2.746908e-49 | -8.615850e-47 |
| Msa0107240 | Msa0569780 | 0.801124 | 1.044029e-48 | -8.615850e-47 |
| Msa0107240 | Msa0588090 | 0.811874 | 5.626770e-51 | -8.615850e-47 |
| Msa0107240 | Msa0610130 | 0.815638 | 8.342080e-52 | -8.615850e-47 |
| Msa0107240 | Msa0610180 | 0.806985 | 6.304494e-50 | -8.615850e-47 |
| Msa0107240 | Msa0618950 | 0.819546 | 1.097233e-52 | -8.615850e-47 |
| Msa0107240 | Msa0618970 | 0.831877 | 1.301186e-55 | -8.615850e-47 |
| Msa0107240 | Msa0624060 | 0.806030 | 1.002698e-49 | -8.615850e-47 |
| Msa0107240 | Msa0652690 | 0.814755 | 1.310716e-51 | -8.615850e-47 |
| Msa0107240 | Msa0661320 | 0.805594 | 1.237792e-49 | -8.615850e-47 |
| Msa0107240 | Msa0667770 | 0.804829 | 1.789795e-49 | -8.615850e-47 |
| Msa0107240 | Msa0693380 | 0.808320 | 3.281584e-50 | -8.615850e-47 |
| Msa0107240 | Msa0703910 | 0.808242 | 3.409954e-50 | -8.615850e-47 |
| Msa0107240 | Msa0704920 | 0.800760 | 1.239145e-48 | -8.615850e-47 |
| Msa0107240 | Msa0705990 | 0.832039 | 1.186328e-55 | -8.615850e-47 |
| Msa0107240 | Msa0709160 | 0.812049 | 5.154462e-51 | -8.615850e-47 |
| Msa0107240 | Msa0741070 | 0.806675 | 7.331292e-50 | -8.615850e-47 |
| Msa0107240 | Msa0742150 | 0.802425 | 5.643529e-49 | -8.615850e-47 |
| Msa0107240 | Msa0748730 | 0.812666 | 3.780270e-51 | -8.615850e-47 |
| Msa0107240 | Msa0749440 | 0.814642 | 1.388318e-51 | -8.615850e-47 |
| Msa0107240 | Msa0750850 | 0.804199 | 2.422117e-49 | -8.615850e-47 |
| Msa0107240 | Msa0751850 | 0.820607 | 6.274112e-53 | -8.615850e-47 |
| Msa0107240 | Msa0763890 | 0.816369 | 5.729121e-52 | -8.615850e-47 |
| Msa0107240 | Msa0763920 | 0.818738 | 1.675483e-52 | -8.615850e-47 |
| Msa0107240 | Msa0779260 | 0.822702 | 2.056856e-53 | -8.615850e-47 |
| Msa0107240 | Msa0797770 | 0.803192 | 3.920120e-49 | -8.615850e-47 |
| Msa0107240 | Msa0817460 | 0.823306 | 1.487436e-53 | -8.615850e-47 |
| Msa0107240 | Msa0820850 | 0.809726 | 1.640767e-50 | -8.615850e-47 |
| Msa0107240 | Msa0831850 | 0.822234 | 2.641556e-53 | -8.615850e-47 |
| Msa0107240 | Msa0860030 | -0.809206 | 2.121897e-50 | -8.615850e-47 |
| Msa0107240 | Msa0861130 | 0.809303 | 2.022388e-50 | -8.615850e-47 |
| Msa0107240 | Msa0868160 | 0.804180 | 2.444159e-49 | -8.615850e-47 |
| Msa0107240 | Msa0880810 | 0.830833 | 2.350087e-55 | -8.615850e-47 |
| Msa0107240 | Msa0902830 | 0.803581 | 3.256544e-49 | -8.615850e-47 |
| Msa0107240 | Msa0936390 | 0.808326 | 3.272603e-50 | -8.615850e-47 |
| Msa0107240 | Msa0945240 | 0.818616 | 1.785754e-52 | -8.615850e-47 |
| Msa0107240 | Msa1001390 | 0.802116 | 6.534151e-49 | -8.615850e-47 |
| Msa0107240 | Msa1026640 | 0.807751 | 4.337209e-50 | -8.615850e-47 |
| Msa0107240 | Msa1026940 | 0.806998 | 6.266045e-50 | -8.615850e-47 |
| Msa0107240 | Msa1063420 | 0.819658 | 1.034397e-52 | -8.615850e-47 |
| Msa0107240 | Msa1080960 | 0.814317 | 1.638339e-51 | -8.615850e-47 |
| Msa0107240 | Msa1081790 | -0.808045 | 3.755157e-50 | -8.615850e-47 |
| Msa0107240 | Msa1089460 | 0.806254 | 8.993868e-50 | -8.615850e-47 |
| Msa0107240 | Msa1115280 | 0.826610 | 2.467938e-54 | -8.615850e-47 |
| Msa0107240 | Msa1119090 | 0.804402 | 2.197552e-49 | -8.615850e-47 |
| Msa0107240 | Msa1119190 | 0.800784 | 1.224917e-48 | -8.615850e-47 |
| Msa0107240 | Msa1143020 | 0.811205 | 7.867108e-51 | -8.615850e-47 |
| Msa0107240 | Msa1144040 | 0.825807 | 3.831723e-54 | -8.615850e-47 |
| Msa0107240 | Msa1157740 | 0.802238 | 6.168144e-49 | -8.615850e-47 |
| Msa0107240 | Msa1181250 | 0.801087 | 1.062284e-48 | -8.615850e-47 |
| Msa0107240 | Msa1205370 | 0.800120 | 1.672448e-48 | -8.615850e-47 |
| Msa0107240 | Msa1206310 | 0.808592 | 2.871256e-50 | -8.615850e-47 |
| Msa0107240 | Msa1206360 | 0.814199 | 1.740046e-51 | -8.615850e-47 |
| Msa0107240 | Msa1207310 | 0.820068 | 8.338205e-53 | -8.615850e-47 |
| Msa0107240 | Msa1215920 | 0.815601 | 8.502376e-52 | -8.615850e-47 |
| Msa0107240 | Msa1218580 | 0.829268 | 5.660431e-55 | -8.615850e-47 |
| Msa0107240 | Msa1246360 | 0.814400 | 1.570437e-51 | -8.615850e-47 |
| Msa0107240 | Msa1270660 | 0.829408 | 5.236057e-55 | -8.615850e-47 |
| Msa0107240 | Msa1270730 | 0.807742 | 4.356699e-50 | -8.615850e-47 |
| Msa0107240 | Msa1276440 | 0.815532 | 8.810587e-52 | -8.615850e-47 |
| Msa0107240 | Msa1295330 | 0.810100 | 1.363288e-50 | -8.615850e-47 |
| Msa0107240 | Msa1295930 | 0.803053 | 4.187688e-49 | -8.615850e-47 |
| Msa0107240 | Msa1307180 | 0.806961 | 6.378584e-50 | -8.615850e-47 |
| Msa0107240 | Msa1307550 | 0.805269 | 1.448301e-49 | -8.615850e-47 |
| Msa0107240 | Msa1316360 | 0.808090 | 3.673703e-50 | -8.615850e-47 |
| Msa0107240 | Msa1331320 | 0.801645 | 8.165754e-49 | -8.615850e-47 |
| Msa0107240 | Msa1332050 | 0.805189 | 1.504909e-49 | -8.615850e-47 |
| Msa0107240 | Msa1355890 | 0.804119 | 2.517092e-49 | -8.615850e-47 |
| Msa0107240 | Msa1359560 | 0.805571 | 1.251813e-49 | -8.615850e-47 |
| Msa0107240 | Msa1368430 | 0.810315 | 1.225088e-50 | -8.615850e-47 |
| Msa0107240 | Msa1371940 | 0.812236 | 4.692660e-51 | -8.615850e-47 |
| Msa0107240 | Msa1372150 | 0.820994 | 5.111317e-53 | -8.615850e-47 |
| Msa0107240 | Msa1372280 | 0.815133 | 1.080565e-51 | -8.615850e-47 |
| Msa0107240 | Msa1378410 | 0.807584 | 4.706247e-50 | -8.615850e-47 |
| Msa0107240 | Msa1382790 | 0.811108 | 8.255008e-51 | -8.615850e-47 |
| Msa0107240 | Msa1383230 | 0.803950 | 2.728965e-49 | -8.615850e-47 |
| Msa0107240 | Msa1428780 | 0.822642 | 2.123701e-53 | -8.615850e-47 |
| Msa0107240 | Msa1436600 | 0.828927 | 6.846074e-55 | -8.615850e-47 |
| Msa0107240 | Msa1442790 | 0.801195 | 1.009915e-48 | -8.615850e-47 |
| Msa0107240 | Msa1457160 | 0.801291 | 9.649009e-49 | -8.615850e-47 |
| Msa0107240 | Msa1462360 | 0.835637 | 1.494742e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107240 | MtrunA17_Chr1g0163291 | 95.050 | 606 | 23 | 3 | 1 | 605 | 1 | 600 | 0.0 | 1184 |
| Msa0107240 | MtrunA17_Chr8g0351061 | 58.934 | 638 | 214 | 10 | 1 | 605 | 1 | 623 | 0.0 | 700 |
| Msa0107240 | MtrunA17_Chr3g0115381 | 41.983 | 474 | 267 | 6 | 134 | 604 | 288 | 756 | 1.05e-124 | 385 |
| Msa0107240 | MtrunA17_Chr5g0424991 | 35.197 | 483 | 245 | 9 | 67 | 491 | 434 | 906 | 4.53e-84 | 281 |
| Msa0107240 | MtrunA17_Chr5g0425001 | 44.954 | 109 | 58 | 2 | 497 | 604 | 21 | 128 | 3.82e-23 | 95.1 |
| Msa0107240 | MtrunA17_Chr5g0403231 | 34.437 | 151 | 91 | 2 | 391 | 533 | 395 | 545 | 1.03e-18 | 90.1 |
| Msa0107240 | MtrunA17_Chr8g0373901 | 32.778 | 180 | 109 | 4 | 391 | 561 | 398 | 574 | 3.27e-18 | 88.6 |
| Msa0107240 | MtrunA17_Chr5g0399331 | 26.613 | 248 | 158 | 10 | 343 | 575 | 301 | 539 | 2.39e-16 | 82.4 |
| Msa0107240 | MtrunA17_Chr4g0034351 | 31.818 | 154 | 97 | 3 | 391 | 536 | 389 | 542 | 4.22e-16 | 81.6 |
| Msa0107240 | MtrunA17_Chr4g0028651 | 26.768 | 198 | 122 | 6 | 391 | 574 | 465 | 653 | 4.25e-12 | 69.3 |
| Msa0107240 | MtrunA17_Chr3g0133631 | 26.154 | 195 | 121 | 6 | 391 | 570 | 341 | 527 | 1.42e-11 | 67.4 |
| Msa0107240 | MtrunA17_Chr8g0374741 | 28.962 | 183 | 106 | 8 | 401 | 570 | 383 | 554 | 4.56e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107240 | AT3G11920.1 | 53.633 | 578 | 237 | 9 | 41 | 605 | 71 | 630 | 0.0 | 586 |
| Msa0107240 | AT4G08550.2 | 39.368 | 475 | 279 | 7 | 134 | 605 | 223 | 691 | 8.34e-113 | 353 |
| Msa0107240 | AT4G08550.1 | 42.023 | 257 | 146 | 3 | 351 | 605 | 382 | 637 | 1.55e-61 | 215 |
| Msa0107240 | AT4G08550.1 | 36.364 | 154 | 93 | 3 | 134 | 287 | 223 | 371 | 3.58e-23 | 104 |
| Msa0107240 | AT1G16750.1 | 31.707 | 205 | 125 | 6 | 388 | 582 | 295 | 494 | 4.49e-20 | 94.4 |
| Msa0107240 | AT3G13000.1 | 30.085 | 236 | 130 | 7 | 371 | 588 | 303 | 521 | 6.72e-20 | 94.0 |
| Msa0107240 | AT3G13000.3 | 30.085 | 236 | 130 | 7 | 371 | 588 | 332 | 550 | 6.88e-20 | 94.0 |
| Msa0107240 | AT3G13000.2 | 30.085 | 236 | 130 | 7 | 371 | 588 | 332 | 550 | 6.88e-20 | 94.0 |
| Msa0107240 | AT5G66600.7 | 28.652 | 178 | 117 | 3 | 391 | 561 | 331 | 505 | 8.13e-18 | 87.4 |
| Msa0107240 | AT5G66600.2 | 28.652 | 178 | 117 | 3 | 391 | 561 | 365 | 539 | 8.57e-18 | 87.4 |
| Msa0107240 | AT5G66600.14 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.28e-18 | 87.4 |
| Msa0107240 | AT5G66600.1 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.28e-18 | 87.4 |
| Msa0107240 | AT5G66600.4 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.28e-18 | 87.4 |
| Msa0107240 | AT5G66600.9 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.28e-18 | 87.4 |
| Msa0107240 | AT5G66600.3 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.28e-18 | 87.4 |
| Msa0107240 | AT2G23700.1 | 32.778 | 180 | 106 | 5 | 392 | 561 | 479 | 653 | 1.27e-16 | 84.0 |
| Msa0107240 | AT5G42690.5 | 30.851 | 188 | 114 | 6 | 391 | 570 | 290 | 469 | 1.17e-15 | 80.5 |
| Msa0107240 | AT5G42690.3 | 30.108 | 186 | 118 | 5 | 391 | 570 | 265 | 444 | 1.21e-15 | 80.5 |
| Msa0107240 | AT5G42690.2 | 30.851 | 188 | 114 | 6 | 391 | 570 | 317 | 496 | 1.42e-15 | 80.5 |
| Msa0107240 | AT5G42690.4 | 30.851 | 188 | 114 | 6 | 391 | 570 | 317 | 496 | 1.42e-15 | 80.5 |
| Msa0107240 | AT5G42690.1 | 30.851 | 188 | 114 | 6 | 391 | 570 | 316 | 495 | 1.48e-15 | 80.5 |
| Msa0107240 | AT5G47380.5 | 26.316 | 247 | 158 | 9 | 359 | 591 | 272 | 508 | 1.32e-13 | 74.3 |
| Msa0107240 | AT5G47380.4 | 26.316 | 247 | 158 | 9 | 359 | 591 | 328 | 564 | 1.33e-13 | 74.3 |
| Msa0107240 | AT5G47380.1 | 26.316 | 247 | 158 | 9 | 359 | 591 | 328 | 564 | 1.49e-13 | 74.3 |
| Msa0107240 | AT1G43020.1 | 29.775 | 178 | 115 | 2 | 381 | 551 | 202 | 376 | 2.39e-13 | 72.8 |
| Msa0107240 | AT4G37080.2 | 30.508 | 177 | 111 | 6 | 401 | 570 | 396 | 567 | 3.55e-13 | 72.8 |
| Msa0107240 | AT4G37080.3 | 30.508 | 177 | 111 | 6 | 401 | 570 | 396 | 567 | 3.55e-13 | 72.8 |
| Msa0107240 | AT4G37080.1 | 30.508 | 177 | 111 | 6 | 401 | 570 | 383 | 554 | 3.86e-13 | 72.8 |
| Msa0107240 | AT3G18900.6 | 32.298 | 161 | 95 | 5 | 391 | 541 | 228 | 384 | 4.87e-13 | 72.0 |
| Msa0107240 | AT3G18900.3 | 32.298 | 161 | 95 | 5 | 391 | 541 | 228 | 384 | 4.87e-13 | 72.0 |
| Msa0107240 | AT3G18900.5 | 32.919 | 161 | 94 | 5 | 391 | 541 | 304 | 460 | 5.41e-13 | 72.0 |
| Msa0107240 | AT3G18900.4 | 32.919 | 161 | 94 | 5 | 391 | 541 | 309 | 465 | 5.97e-13 | 72.0 |
| Msa0107240 | AT1G16750.2 | 46.154 | 78 | 37 | 2 | 388 | 462 | 295 | 370 | 4.61e-12 | 68.6 |
| Msa0107240 | AT5G66600.12 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.97e-12 | 68.9 |
| Msa0107240 | AT5G66600.11 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.97e-12 | 68.9 |
| Msa0107240 | AT5G66600.6 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.97e-12 | 68.9 |
| Msa0107240 | AT5G66600.13 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.97e-12 | 68.9 |
| Msa0107240 | AT1G76620.1 | 28.571 | 182 | 114 | 6 | 391 | 561 | 293 | 469 | 1.40e-11 | 67.8 |
Find 103 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAATTACCACTTCAAAAT+TGG | 0.141892 | 1_3:-17249356 | None:intergenic |
| TCTCAAAATGTTTCAATTTC+CGG | 0.172190 | 1_3:+17246946 | Msa0107240:CDS |
| TGCAGGTACAGTGTTGATTT+TGG | 0.235808 | 1_3:+17249469 | Msa0107240:intron |
| ATGAAAGAAATGTGGTAAAA+TGG | 0.248386 | 1_3:+17249494 | Msa0107240:CDS |
| CTCAAAATGTTTCAATTTCC+GGG | 0.252022 | 1_3:+17246947 | Msa0107240:CDS |
| GTAATAGTGGCAAGAGAATA+AGG | 0.303287 | 1_3:-17248167 | None:intergenic |
| ATTCCGGTGGCACCGGAGTA+TGG | 0.309317 | 1_3:+17244882 | Msa0107240:CDS |
| AATAAATTCTTGAATATTGC+AGG | 0.312907 | 1_3:+17249615 | Msa0107240:exon |
| TCAGCAAAAGTGAAGAATTT+AGG | 0.316081 | 1_3:+17247093 | Msa0107240:CDS |
| TTGATGGGATTGTTTCGTTT+GGG | 0.320777 | 1_3:-17244368 | None:intergenic |
| TCTGATTTCCAGTATTTGAT+TGG | 0.336556 | 1_3:+17248137 | Msa0107240:CDS |
| GTTGATGGGATTGTTTCGTT+TGG | 0.340065 | 1_3:-17244369 | None:intergenic |
| AACGACAAGCTGTCGTCGTT+GGG | 0.351556 | 1_3:+17244567 | Msa0107240:CDS |
| AAGGGCTTGACTAAGGAATA+AGG | 0.386116 | 1_3:-17248221 | None:intergenic |
| ATGAATCCTTTGATTCACTT+TGG | 0.386588 | 1_3:+17249188 | Msa0107240:CDS |
| AGTCTTATGCTTCTGAAGAT+AGG | 0.396481 | 1_3:+17247048 | Msa0107240:CDS |
| AGATAAACGGTTCATGTTCA+AGG | 0.408067 | 1_3:-17246926 | None:intergenic |
| AACGACGACAGCTTGTCGTT+GGG | 0.408096 | 1_3:-17244564 | None:intergenic |
| GAGGATACCATTTGTAATAG+TGG | 0.409546 | 1_3:-17248180 | None:intergenic |
| TTCTTCAACGACAAGCTAAT+CGG | 0.410642 | 1_3:+17244765 | Msa0107240:CDS |
| CTTCTGTCATTTGTGCCAAA+GGG | 0.419712 | 1_3:-17248239 | None:intergenic |
| AGAGATTACCGATTCAAGAT+AGG | 0.427159 | 1_3:+17244970 | Msa0107240:CDS |
| ATTCACTTTGGACTTTGTAA+TGG | 0.433942 | 1_3:+17249200 | Msa0107240:CDS |
| CAAGCTAATCGGTGGATTAG+TGG | 0.434140 | 1_3:+17244776 | Msa0107240:CDS |
| TGCAACTAGAGAGTTCTTAG+AGG | 0.440255 | 1_3:+17249286 | Msa0107240:CDS |
| ACAGATCATTACTGCGTTGT+CGG | 0.441603 | 1_3:-17244407 | None:intergenic |
| GTGCAGCTGCAGTCTGTGAT+AGG | 0.443467 | 1_3:+17246997 | Msa0107240:CDS |
| GTCAAGAAGGTGTAATCAAT+AGG | 0.445472 | 1_3:+17248105 | Msa0107240:CDS |
| TCAAAATTGGAGTGAGATGA+AGG | 0.447979 | 1_3:-17249343 | None:intergenic |
| TGAATTAGAGAAGAAATTGA+TGG | 0.449683 | 1_3:+17244830 | Msa0107240:CDS |
| TTCTTGTATGAGATATGAAC+AGG | 0.451107 | 1_3:-17249580 | None:intergenic |
| AAAGAGCTGAAACAAAGAAC+TGG | 0.457091 | 1_3:+17244714 | Msa0107240:CDS |
| TATTCCTTAGTCAAGCCCTT+TGG | 0.459648 | 1_3:+17248224 | Msa0107240:CDS |
| AGAAGCATAAGACTCAAGTA+TGG | 0.463463 | 1_3:-17247039 | None:intergenic |
| CCTTCTGTCATTTGTGCCAA+AGG | 0.463764 | 1_3:-17248240 | None:intergenic |
| TGATGGGATTGTTTCGTTTG+GGG | 0.466535 | 1_3:-17244367 | None:intergenic |
| TCTCTTGCCACTATTACAAA+TGG | 0.468074 | 1_3:+17248173 | Msa0107240:CDS |
| TTGACACATCTCTTAGCTGA+TGG | 0.468309 | 1_3:+17249553 | Msa0107240:CDS |
| GATTTCCAGTATTTGATTGG+AGG | 0.471100 | 1_3:+17248140 | Msa0107240:CDS |
| TGTGCCAAAGGGCTTGACTA+AGG | 0.473650 | 1_3:-17248228 | None:intergenic |
| GATGTCCTCCAATCAAATAC+TGG | 0.481014 | 1_3:-17248145 | None:intergenic |
| TTCATCAACCTATCTTGAAT+CGG | 0.484714 | 1_3:-17244978 | None:intergenic |
| TGAGATGGTGGAAGTGGAAA+AGG | 0.491325 | 1_3:+17244911 | Msa0107240:CDS |
| AATGCTTAGGCTGTTGAGGT+TGG | 0.495478 | 1_3:+17246740 | Msa0107240:intron |
| TTGTCGTTGAAGAAAATCAT+TGG | 0.501140 | 1_3:-17244756 | None:intergenic |
| ATTTGATGAGATGGTGGAAG+TGG | 0.501612 | 1_3:+17244905 | Msa0107240:CDS |
| CGGTGATATTCCGGTGGCAC+CGG | 0.502364 | 1_3:+17244875 | Msa0107240:CDS |
| ATGGGATTGTTTCGTTTGGG+GGG | 0.504694 | 1_3:-17244365 | None:intergenic |
| GTGATCTTCGATTGCTTCTG+AGG | 0.509976 | 1_3:-17248199 | None:intergenic |
| TCTCATACAAGAATTATGAT+TGG | 0.514584 | 1_3:+17249590 | Msa0107240:CDS |
| TACTTGGATGCAAATAAAGC+TGG | 0.516390 | 1_3:+17249526 | Msa0107240:CDS |
| AGAGAGTTCTTAGAGGATGA+TGG | 0.517425 | 1_3:+17249293 | Msa0107240:CDS |
| GTGACAGAGTTCAATCTCTC+CGG | 0.523173 | 1_3:+17244513 | Msa0107240:CDS |
| AACAAATGCTTAGGCTGTTG+AGG | 0.523405 | 1_3:+17246736 | Msa0107240:intron |
| AACTCTTCAGCAACTCTACA+AGG | 0.523810 | 1_3:-17249257 | None:intergenic |
| CAAAGTCCAAAGTGAATCAA+AGG | 0.526806 | 1_3:-17249194 | None:intergenic |
| CAACGACAAGCTGTCGTCGT+TGG | 0.527022 | 1_3:+17244566 | Msa0107240:CDS |
| AATCCATACTCCGGTGCCAC+CGG | 0.531377 | 1_3:-17244885 | None:intergenic |
| TTCTTGAATATTGCAGGACT+AGG | 0.531727 | 1_3:+17249621 | Msa0107240:exon |
| GATGGGATTGTTTCGTTTGG+GGG | 0.531764 | 1_3:-17244366 | None:intergenic |
| CAGCTTCTTGTAAGAAACCA+TGG | 0.536531 | 1_3:+17245044 | Msa0107240:CDS |
| GGGGTGTGAATTTGAAACAG+GGG | 0.536925 | 1_3:-17244346 | None:intergenic |
| GGGTGTGAATTTGAAACAGG+GGG | 0.537249 | 1_3:-17244345 | None:intergenic |
| TAGGAGACATGTTGATTATG+TGG | 0.538664 | 1_3:+17247067 | Msa0107240:CDS |
| CAACGACGACAGCTTGTCGT+TGG | 0.539513 | 1_3:-17244565 | None:intergenic |
| CTTAAACTTGTACAATGCCA+TGG | 0.555357 | 1_3:+17248055 | Msa0107240:CDS |
| ACACATCTCTTAGCTGATGG+TGG | 0.563336 | 1_3:+17249556 | Msa0107240:CDS |
| ATCCTACTCTTATCATAGCA+TGG | 0.563711 | 1_3:-17248082 | None:intergenic |
| GATGAAGGGTCCTCTTCTCT+AGG | 0.574774 | 1_3:-17249328 | None:intergenic |
| TTCAACGACAAGCTAATCGG+TGG | 0.578385 | 1_3:+17244768 | Msa0107240:CDS |
| AAATTGATGGAAATTGCGAA+TGG | 0.580140 | 1_3:+17244843 | Msa0107240:CDS |
| AAAGGAGGATGAGATAGTGA+AGG | 0.580685 | 1_3:+17244929 | Msa0107240:CDS |
| TTTCTTACCCGAAAACAGGA+TGG | 0.586581 | 1_3:-17246790 | None:intergenic |
| CAAATACTGGAAATCAGAGA+AGG | 0.589193 | 1_3:-17248132 | None:intergenic |
| CACTATCATTTGTAGCACCC+CGG | 0.589714 | 1_3:-17246965 | None:intergenic |
| AAAATGGATAATGAATTACT+TGG | 0.594459 | 1_3:+17249510 | Msa0107240:CDS |
| ATCTCATCAAATCCATACTC+CGG | 0.601315 | 1_3:-17244894 | None:intergenic |
| CCATGGTTATGTTCATCACA+AGG | 0.606680 | 1_3:+17245061 | Msa0107240:CDS |
| ACGACGACAGCTTGTCGTTG+GGG | 0.611023 | 1_3:-17244563 | None:intergenic |
| CGGTGCCACCGGAATATCAC+CGG | 0.611595 | 1_3:-17244874 | None:intergenic |
| GCAAAAGTGAAGAATTTAGG+AGG | 0.612288 | 1_3:+17247096 | Msa0107240:CDS |
| CATGACGCAGGATCTGCAGC+GGG | 0.615533 | 1_3:+17247989 | Msa0107240:CDS |
| TCAAAATGTTTCAATTTCCG+GGG | 0.620972 | 1_3:+17246948 | Msa0107240:CDS |
| ATAAGAGTAGGATGTCAAGA+AGG | 0.626225 | 1_3:+17248092 | Msa0107240:CDS |
| ACGACAAGCTGTCGTCGTTG+GGG | 0.626434 | 1_3:+17244568 | Msa0107240:CDS |
| ATCCATGCTATGATAAGAGT+AGG | 0.628623 | 1_3:+17248080 | Msa0107240:CDS |
| GATGGTGGAAGTGGAAAAGG+AGG | 0.631276 | 1_3:+17244914 | Msa0107240:CDS |
| TTGAAGTTGACCTAGAGAAG+AGG | 0.632403 | 1_3:+17249318 | Msa0107240:CDS |
| CAAAATTGGAGTGAGATGAA+GGG | 0.633095 | 1_3:-17249342 | None:intergenic |
| CCTTGTGATGAACATAACCA+TGG | 0.635178 | 1_3:-17245061 | None:intergenic |
| CCTTTGGCACAAATGACAGA+AGG | 0.637419 | 1_3:+17248240 | Msa0107240:CDS |
| TAGTGGAATTAAACGCGATG+AGG | 0.643929 | 1_3:+17244793 | Msa0107240:CDS |
| CACAAATGACAGAAGGCTAG+AGG | 0.644355 | 1_3:+17248247 | Msa0107240:CDS |
| TATCATAGCATGGATGACCA+TGG | 0.646877 | 1_3:-17248072 | None:intergenic |
| CTAAATCAAGCCCAAAAGTG+AGG | 0.651929 | 1_3:+17249225 | Msa0107240:CDS |
| GTATGGATTTGATGAGATGG+TGG | 0.653882 | 1_3:+17244899 | Msa0107240:CDS |
| TCTACCGAAAACAACATCAA+CGG | 0.657551 | 1_3:+17244255 | Msa0107240:CDS |
| CAGGTATGTAAACATGACGC+AGG | 0.659327 | 1_3:+17247977 | Msa0107240:intron |
| GGAGTATGGATTTGATGAGA+TGG | 0.666997 | 1_3:+17244896 | Msa0107240:CDS |
| TGATGAAGATGAAGATTGTG+AGG | 0.673794 | 1_3:+17244994 | Msa0107240:CDS |
| ACATGACGCAGGATCTGCAG+CGG | 0.677376 | 1_3:+17247988 | Msa0107240:CDS |
| GCGATGAGGAAGAACGAAGG+CGG | 0.720965 | 1_3:+17244807 | Msa0107240:CDS |
| AACGCGATGAGGAAGAACGA+AGG | 0.733578 | 1_3:+17244804 | Msa0107240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATTCTATAAAAAATTAT+AGG | + | chr1_3:17245379-17245398 | Msa0107240:intron | 10.0% |
| !!! | TTTTCTTGAAAAAAAAAAAT+AGG | + | chr1_3:17245829-17245848 | Msa0107240:intron | 10.0% |
| !! | TATTCAAATTGAATAAATAT+AGG | - | chr1_3:17246261-17246280 | None:intergenic | 10.0% |
| !!! | TACATTTTTAAAAAGTAAAA+GGG | - | chr1_3:17248383-17248402 | None:intergenic | 10.0% |
| !!! | TTACATTTTTAAAAAGTAAA+AGG | - | chr1_3:17248384-17248403 | None:intergenic | 10.0% |
| !!! | TTTGTTGTTTTTGTTTTTTT+TGG | + | chr1_3:17245121-17245140 | Msa0107240:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGGTACAA+TGG | + | chr1_3:17245154-17245173 | Msa0107240:intron | 15.0% |
| !!! | AAAATAATATTTGACTGTTT+TGG | + | chr1_3:17245250-17245269 | Msa0107240:intron | 15.0% |
| !! | TAAAAGAAATATTTAATGGA+CGG | + | chr1_3:17245324-17245343 | Msa0107240:intron | 15.0% |
| !!! | TTTTTTTTCAAGAAAAGAAA+AGG | - | chr1_3:17245825-17245844 | None:intergenic | 15.0% |
| !! | CTATTACTTAAAAAACATAT+TGG | - | chr1_3:17246842-17246861 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTAAAAAGAATAG+AGG | - | chr1_3:17247766-17247785 | None:intergenic | 15.0% |
| !!! | TGTGTTTCAATATTAAATTT+TGG | + | chr1_3:17248278-17248297 | Msa0107240:intron | 15.0% |
| !!! | AATGTAATAATTTTTTTCCT+TGG | + | chr1_3:17248397-17248416 | Msa0107240:intron | 15.0% |
| !! | ATATAATGAAAAAACATGTT+TGG | + | chr1_3:17248518-17248537 | Msa0107240:intron | 15.0% |
| !!! | AACACTAGTTTAATTTTATT+TGG | - | chr1_3:17248691-17248710 | None:intergenic | 15.0% |
| !! | TAGTAATTTATATTATTTGC+AGG | + | chr1_3:17249452-17249471 | Msa0107240:intron | 15.0% |
| !!! | TGAAAGTGTTTTTTTTGTAA+CGG | - | chr1_3:17244289-17244308 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGACATTTTGATT+TGG | + | chr1_3:17245200-17245219 | Msa0107240:intron | 20.0% |
| !! | CATTCAATAAATAATGTATG+TGG | - | chr1_3:17245551-17245570 | None:intergenic | 20.0% |
| !!! | GAGTATTTTTTAACAATCTT+AGG | + | chr1_3:17245612-17245631 | Msa0107240:intron | 20.0% |
| !! | TCAATCAAACATATATCAAT+TGG | - | chr1_3:17245691-17245710 | None:intergenic | 20.0% |
| !!! | AAAAGAAAAGGCTAAAATTT+TGG | - | chr1_3:17245813-17245832 | None:intergenic | 20.0% |
| !!! | ATAAATGTTTTCCATTTTCA+AGG | - | chr1_3:17245897-17245916 | None:intergenic | 20.0% |
| !! | CTTAAAAATTCAATGCAAAT+TGG | - | chr1_3:17246015-17246034 | None:intergenic | 20.0% |
| !! | TACAAGAAGAAAATTAATCA+AGG | - | chr1_3:17246866-17246885 | None:intergenic | 20.0% |
| !!! | TTGATTAATTTTCTTCTTGT+AGG | + | chr1_3:17246865-17246884 | Msa0107240:intron | 20.0% |
| !!! | TGATTAATTTTCTTCTTGTA+GGG | + | chr1_3:17246866-17246885 | Msa0107240:intron | 20.0% |
| !!! | TTGAAACATTTTGAGATAAA+CGG | - | chr1_3:17246942-17246961 | None:intergenic | 20.0% |
| !! | AAAAAATATAAGTTGCAAAC+TGG | - | chr1_3:17247645-17247664 | None:intergenic | 20.0% |
| !! | TTATATAATACATGTCGAAA+GGG | - | chr1_3:17247851-17247870 | None:intergenic | 20.0% |
| !! | ATTATATAATACATGTCGAA+AGG | - | chr1_3:17247852-17247871 | None:intergenic | 20.0% |
| !! | TAACTAAAATTCTAGATTCT+AGG | - | chr1_3:17248427-17248446 | None:intergenic | 20.0% |
| !!! | TTTTTTGGTAATCAAGTTAT+TGG | - | chr1_3:17248620-17248639 | None:intergenic | 20.0% |
| !! | TGAATATACGAAAAACAAAA+GGG | - | chr1_3:17248995-17249014 | None:intergenic | 20.0% |
| !! | ATGAATATACGAAAAACAAA+AGG | - | chr1_3:17248996-17249015 | None:intergenic | 20.0% |
| !! | AAAATGGATAATGAATTACT+TGG | + | chr1_3:17249510-17249529 | Msa0107240:CDS | 20.0% |
| !! | AATAAATTCTTGAATATTGC+AGG | + | chr1_3:17249615-17249634 | Msa0107240:exon | 20.0% |
| !!! | TTTGAGTTGTTTTTGTTGTT+GGG | - | chr1_3:17244227-17244246 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTGTTTTTGTTGT+TGG | - | chr1_3:17244228-17244247 | None:intergenic | 25.0% |
| !!! | GAAAGTGTTTTTTTTGTAAC+GGG | - | chr1_3:17244288-17244307 | None:intergenic | 25.0% |
| !!! | AGTTACTACTACTTTTAAAC+CGG | - | chr1_3:17244535-17244554 | None:intergenic | 25.0% |
| ! | TGAATTAGAGAAGAAATTGA+TGG | + | chr1_3:17244830-17244849 | Msa0107240:CDS | 25.0% |
| ! | ATAGTGATGAAAAAGTTCAA+AGG | + | chr1_3:17245273-17245292 | Msa0107240:intron | 25.0% |
| !! | TTTTTGCTAATGTGTAAAGT+AGG | - | chr1_3:17245351-17245370 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr1_3:17245586-17245605 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr1_3:17245512-17245531 | Msa0107240:intron | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | + | chr1_3:17245586-17245605 | Msa0107240:intron | 25.0% |
| ! | AAAGAAAATTTGATTGAGTG+AGG | + | chr1_3:17245718-17245737 | Msa0107240:intron | 25.0% |
| ! | ACATGTTAAGATACATGTTA+AGG | - | chr1_3:17245787-17245806 | None:intergenic | 25.0% |
| ! | AAATCACAAAAACTTTGCAT+TGG | + | chr1_3:17246397-17246416 | Msa0107240:intron | 25.0% |
| !!! | AATGTTTTTAAGTGTGTGAT+TGG | - | chr1_3:17246463-17246482 | None:intergenic | 25.0% |
| ! | TTGTCACATTCATTATTTGA+CGG | + | chr1_3:17246535-17246554 | Msa0107240:intron | 25.0% |
| ! | TCGTTAGAGAAACATAATTT+AGG | - | chr1_3:17246685-17246704 | None:intergenic | 25.0% |
| ! | TCTCAAAATGTTTCAATTTC+CGG | + | chr1_3:17246946-17246965 | Msa0107240:CDS | 25.0% |
| ! | GTAAATCTTATTGTCTATCA+CGG | + | chr1_3:17247126-17247145 | Msa0107240:intron | 25.0% |
| ! | CAAGTTAGAACTAACATATA+AGG | - | chr1_3:17247319-17247338 | None:intergenic | 25.0% |
| ! | TAATTGCATGAAGCTAAATT+TGG | - | chr1_3:17247538-17247557 | None:intergenic | 25.0% |
| !! | ATTTCATTCAAGTTTAGCTT+AGG | - | chr1_3:17247896-17247915 | None:intergenic | 25.0% |
| !!! | ATTTTGTTACTTCTGATATG+AGG | + | chr1_3:17247920-17247939 | Msa0107240:intron | 25.0% |
| !!! | AAAGTGATTTTTCAAAATGC+AGG | + | chr1_3:17247958-17247977 | Msa0107240:intron | 25.0% |
| ! | AATCTTTCTCAAAATCCTTA+GGG | - | chr1_3:17248329-17248348 | None:intergenic | 25.0% |
| !!! | GTAATAATTTTTTTCCTTGG+TGG | + | chr1_3:17248400-17248419 | Msa0107240:intron | 25.0% |
| ! | AATGAAAAAACATGTTTGGA+AGG | + | chr1_3:17248522-17248541 | Msa0107240:intron | 25.0% |
| ! | ATGAAAAAACATGTTTGGAA+GGG | + | chr1_3:17248523-17248542 | Msa0107240:intron | 25.0% |
| ! | TAACTTGATTACCAAAAAAC+AGG | + | chr1_3:17248621-17248640 | Msa0107240:intron | 25.0% |
| !! | GTGAGTCAACTAAAATTTTA+GGG | - | chr1_3:17248648-17248667 | None:intergenic | 25.0% |
| ! | GGTCAATTATAGTAATTCAA+GGG | - | chr1_3:17248670-17248689 | None:intergenic | 25.0% |
| ! | TGGTCAATTATAGTAATTCA+AGG | - | chr1_3:17248671-17248690 | None:intergenic | 25.0% |
| ! | GTATATTCATTCTATTGAAC+CGG | + | chr1_3:17249006-17249025 | Msa0107240:intron | 25.0% |
| ! | AAATAGTTATCGCACTTTAT+GGG | - | chr1_3:17249077-17249096 | None:intergenic | 25.0% |
| !! | ACATTCTGCTATTGATAATA+TGG | + | chr1_3:17249108-17249127 | Msa0107240:intron | 25.0% |
| ! | CTTAATTACCACTTCAAAAT+TGG | - | chr1_3:17249359-17249378 | None:intergenic | 25.0% |
| !!! | TTTTGGAAATGAAAGAAATG+TGG | + | chr1_3:17249486-17249505 | Msa0107240:CDS | 25.0% |
| ! | ATGAAAGAAATGTGGTAAAA+TGG | + | chr1_3:17249494-17249513 | Msa0107240:CDS | 25.0% |
| ! | TCTCATACAAGAATTATGAT+TGG | + | chr1_3:17249590-17249609 | Msa0107240:CDS | 25.0% |
| !!! | AGAAAGTTTTGAGTGTTGAT+GGG | - | chr1_3:17244386-17244405 | None:intergenic | 30.0% |
| !!! | AAGAAAGTTTTGAGTGTTGA+TGG | - | chr1_3:17244387-17244406 | None:intergenic | 30.0% |
| TTGTCGTTGAAGAAAATCAT+TGG | - | chr1_3:17244759-17244778 | None:intergenic | 30.0% | |
| AAATTGATGGAAATTGCGAA+TGG | + | chr1_3:17244843-17244862 | Msa0107240:CDS | 30.0% | |
| ! | ATTGCGAATGGAAAATTTTC+CGG | + | chr1_3:17244855-17244874 | Msa0107240:CDS | 30.0% |
| ! | AAAATTTTCCGGTGATATTC+CGG | + | chr1_3:17244866-17244885 | Msa0107240:CDS | 30.0% |
| TTCATCAACCTATCTTGAAT+CGG | - | chr1_3:17244981-17245000 | None:intergenic | 30.0% | |
| !!! | ATTGTGAGGAATTGTTTTGA+TGG | + | chr1_3:17245008-17245027 | Msa0107240:CDS | 30.0% |
| !!! | TTGTTTTGATGGAAGTGAAT+TGG | + | chr1_3:17245019-17245038 | Msa0107240:CDS | 30.0% |
| TTGTTAAAAAATACTCCCTC+CGG | - | chr1_3:17245608-17245627 | None:intergenic | 30.0% | |
| CACATGACATATGTTACATT+TGG | - | chr1_3:17245651-17245670 | None:intergenic | 30.0% | |
| ATCTCCATCAAAAAATTGTG+AGG | - | chr1_3:17245760-17245779 | None:intergenic | 30.0% | |
| ! | AAACTTTGCATTGGTAATCT+CGG | + | chr1_3:17246406-17246425 | Msa0107240:intron | 30.0% |
| GTCACAGAATTTAATGTGTT+CGG | + | chr1_3:17246501-17246520 | Msa0107240:intron | 30.0% | |
| TGTCACATTCATTATTTGAC+GGG | + | chr1_3:17246536-17246555 | Msa0107240:intron | 30.0% | |
| TCATTCCAAAACAAATGCTT+AGG | + | chr1_3:17246727-17246746 | Msa0107240:intron | 30.0% | |
| ! | TTATTTTCTTACCCGAAAAC+AGG | - | chr1_3:17246797-17246816 | None:intergenic | 30.0% |
| ! | AACATATTGGTAGCTTTCTT+TGG | - | chr1_3:17246829-17246848 | None:intergenic | 30.0% |
| ! | TTTTCTTCTTGTAGGGAAAA+TGG | + | chr1_3:17246873-17246892 | Msa0107240:intron | 30.0% |
| CTCAAAATGTTTCAATTTCC+GGG | + | chr1_3:17246947-17246966 | Msa0107240:CDS | 30.0% | |
| TCAAAATGTTTCAATTTCCG+GGG | + | chr1_3:17246948-17246967 | Msa0107240:CDS | 30.0% | |
| !! | AAATTCTTCACTTTTGCTGA+TGG | - | chr1_3:17247093-17247112 | None:intergenic | 30.0% |
| TCAGCAAAAGTGAAGAATTT+AGG | + | chr1_3:17247093-17247112 | Msa0107240:CDS | 30.0% | |
| TTTCATTCATCCACATTTCT+CGG | - | chr1_3:17247267-17247286 | None:intergenic | 30.0% | |
| AATGTGGATGAATGAAATGA+AGG | + | chr1_3:17247270-17247289 | Msa0107240:intron | 30.0% | |
| ATGTGGATGAATGAAATGAA+GGG | + | chr1_3:17247271-17247290 | Msa0107240:intron | 30.0% | |
| AAAGAAATGCAGAGAATAAC+AGG | + | chr1_3:17247389-17247408 | Msa0107240:intron | 30.0% | |
| AAGAAAATACCTGAATTTGC+CGG | + | chr1_3:17247778-17247797 | Msa0107240:intron | 30.0% | |
| AGGTTTCAAAAGTAGGTTAT+AGG | - | chr1_3:17247827-17247846 | None:intergenic | 30.0% | |
| TCTGATTTCCAGTATTTGAT+TGG | + | chr1_3:17248137-17248156 | Msa0107240:CDS | 30.0% | |
| CAATCTTTCTCAAAATCCTT+AGG | - | chr1_3:17248330-17248349 | None:intergenic | 30.0% | |
| !! | TTTTAGTTACCAACGTTACA+TGG | + | chr1_3:17248438-17248457 | Msa0107240:intron | 30.0% |
| AAATCTCAGACCTTACTTAA+GGG | - | chr1_3:17248491-17248510 | None:intergenic | 30.0% | |
| TGAAAAAACATGTTTGGAAG+GGG | + | chr1_3:17248524-17248543 | Msa0107240:intron | 30.0% | |
| !!! | AATTTTAGGGTCCTGTTTTT+TGG | - | chr1_3:17248635-17248654 | None:intergenic | 30.0% |
| ! | GGTGAGTCAACTAAAATTTT+AGG | - | chr1_3:17248649-17248668 | None:intergenic | 30.0% |
| TCAACTCACAGAAAATTTGA+AGG | - | chr1_3:17248717-17248736 | None:intergenic | 30.0% | |
| TTCAAGGGAATGTTATAATC+TGG | + | chr1_3:17248837-17248856 | Msa0107240:intron | 30.0% | |
| GAAATAGTTATCGCACTTTA+TGG | - | chr1_3:17249078-17249097 | None:intergenic | 30.0% | |
| ATGAATCCTTTGATTCACTT+TGG | + | chr1_3:17249188-17249207 | Msa0107240:CDS | 30.0% | |
| ATTCACTTTGGACTTTGTAA+TGG | + | chr1_3:17249200-17249219 | Msa0107240:CDS | 30.0% | |
| !! | GTGAAAAAAACCTCACTTTT+GGG | - | chr1_3:17249238-17249257 | None:intergenic | 30.0% |
| TTCTTGTATGAGATATGAAC+AGG | - | chr1_3:17249583-17249602 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGTTGTTGGGTTC+GGG | - | chr1_3:17244221-17244240 | None:intergenic | 35.0% |
| !!! | GTTGTTTTTGTTGTTGGGTT+CGG | - | chr1_3:17244222-17244241 | None:intergenic | 35.0% |
| TCTACCGAAAACAACATCAA+CGG | + | chr1_3:17244255-17244274 | Msa0107240:CDS | 35.0% | |
| !!! | GTTACCGTTGATGTTGTTTT+CGG | - | chr1_3:17244262-17244281 | None:intergenic | 35.0% |
| TTGATGGGATTGTTTCGTTT+GGG | - | chr1_3:17244371-17244390 | None:intergenic | 35.0% | |
| ! | TTTTAACGATGTGATGGTTC+GGG | - | chr1_3:17244445-17244464 | None:intergenic | 35.0% |
| !! | GTTTTAACGATGTGATGGTT+CGG | - | chr1_3:17244446-17244465 | None:intergenic | 35.0% |
| !!! | TGAGTGTTTTAACGATGTGA+TGG | - | chr1_3:17244451-17244470 | None:intergenic | 35.0% |
| AAAGAGCTGAAACAAAGAAC+TGG | + | chr1_3:17244714-17244733 | Msa0107240:CDS | 35.0% | |
| TTCTTCAACGACAAGCTAAT+CGG | + | chr1_3:17244765-17244784 | Msa0107240:CDS | 35.0% | |
| ATCTCATCAAATCCATACTC+CGG | - | chr1_3:17244897-17244916 | None:intergenic | 35.0% | |
| !! | AGAGATTACCGATTCAAGAT+AGG | + | chr1_3:17244970-17244989 | Msa0107240:CDS | 35.0% |
| TGATGAAGATGAAGATTGTG+AGG | + | chr1_3:17244994-17245013 | Msa0107240:CDS | 35.0% | |
| AAGAAATTAACTACTCCCTC+CGG | + | chr1_3:17245455-17245474 | Msa0107240:intron | 35.0% | |
| AATTGGACCAAATCCATTGT+TGG | - | chr1_3:17245674-17245693 | None:intergenic | 35.0% | |
| !!! | TGTGCCTCACAATTTTTTGA+TGG | + | chr1_3:17245753-17245772 | Msa0107240:intron | 35.0% |
| GTCACATTCATTATTTGACG+GGG | + | chr1_3:17246537-17246556 | Msa0107240:intron | 35.0% | |
| ! | AACAGCCTAAGCATTTGTTT+TGG | - | chr1_3:17246735-17246754 | None:intergenic | 35.0% |
| !! | TTGTAGGGAAAATGGTTTTG+AGG | + | chr1_3:17246881-17246900 | Msa0107240:intron | 35.0% |
| AGATAAACGGTTCATGTTCA+AGG | - | chr1_3:17246929-17246948 | None:intergenic | 35.0% | |
| ! | AGAAGCATAAGACTCAAGTA+TGG | - | chr1_3:17247042-17247061 | None:intergenic | 35.0% |
| ! | AGTCTTATGCTTCTGAAGAT+AGG | + | chr1_3:17247048-17247067 | Msa0107240:CDS | 35.0% |
| ! | TAGGAGACATGTTGATTATG+TGG | + | chr1_3:17247067-17247086 | Msa0107240:CDS | 35.0% |
| GCAAAAGTGAAGAATTTAGG+AGG | + | chr1_3:17247096-17247115 | Msa0107240:CDS | 35.0% | |
| AGTGAAGAATTTAGGAGGTA+TGG | + | chr1_3:17247101-17247120 | Msa0107240:intron | 35.0% | |
| TATGGACATTGAATACGAGA+CGG | - | chr1_3:17247222-17247241 | None:intergenic | 35.0% | |
| GCTATGTATAGAACATGTCA+AGG | + | chr1_3:17247351-17247370 | Msa0107240:intron | 35.0% | |
| ! | AGATAGTGACTTGTGTTTCA+AGG | - | chr1_3:17247497-17247516 | None:intergenic | 35.0% |
| TTACACGTTAGTGTCACATA+CGG | + | chr1_3:17247586-17247605 | Msa0107240:intron | 35.0% | |
| CGTGTAGTGAAAACTAAGAT+TGG | - | chr1_3:17247691-17247710 | None:intergenic | 35.0% | |
| !! | TTAGTTTTCACTACACGACT+GGG | + | chr1_3:17247694-17247713 | Msa0107240:intron | 35.0% |
| !! | GGGGAATGAATGTTTGATTT+TGG | + | chr1_3:17247714-17247733 | Msa0107240:intron | 35.0% |
| AAGAACCTTATTGCTGATAC+CGG | - | chr1_3:17247800-17247819 | None:intergenic | 35.0% | |
| AAAGGGAAGGTTTCAAAAGT+AGG | - | chr1_3:17247834-17247853 | None:intergenic | 35.0% | |
| ATAATACATGTCGAAAGGGA+AGG | - | chr1_3:17247847-17247866 | None:intergenic | 35.0% | |
| CTTAAACTTGTACAATGCCA+TGG | + | chr1_3:17248055-17248074 | Msa0107240:CDS | 35.0% | |
| ATCCATGCTATGATAAGAGT+AGG | + | chr1_3:17248080-17248099 | Msa0107240:CDS | 35.0% | |
| ATCCTACTCTTATCATAGCA+TGG | - | chr1_3:17248085-17248104 | None:intergenic | 35.0% | |
| ATAAGAGTAGGATGTCAAGA+AGG | + | chr1_3:17248092-17248111 | Msa0107240:CDS | 35.0% | |
| ! | GTCAAGAAGGTGTAATCAAT+AGG | + | chr1_3:17248105-17248124 | Msa0107240:CDS | 35.0% |
| CAAATACTGGAAATCAGAGA+AGG | - | chr1_3:17248135-17248154 | None:intergenic | 35.0% | |
| GATTTCCAGTATTTGATTGG+AGG | + | chr1_3:17248140-17248159 | Msa0107240:CDS | 35.0% | |
| GTAATAGTGGCAAGAGAATA+AGG | - | chr1_3:17248170-17248189 | None:intergenic | 35.0% | |
| TCTCTTGCCACTATTACAAA+TGG | + | chr1_3:17248173-17248192 | Msa0107240:CDS | 35.0% | |
| GAGGATACCATTTGTAATAG+TGG | - | chr1_3:17248183-17248202 | None:intergenic | 35.0% | |
| ! | ACATTTGTTGCCTTATGAGT+CGG | + | chr1_3:17248303-17248322 | Msa0107240:intron | 35.0% |
| GGACTTAAATCCCTTAAGTA+AGG | + | chr1_3:17248478-17248497 | Msa0107240:intron | 35.0% | |
| CAAATCTCAGACCTTACTTA+AGG | - | chr1_3:17248492-17248511 | None:intergenic | 35.0% | |
| CTAATCTCTGTCAGAAAACA+TGG | - | chr1_3:17248572-17248591 | None:intergenic | 35.0% | |
| AGGGAATGTTATAATCTGGA+CGG | + | chr1_3:17248841-17248860 | Msa0107240:intron | 35.0% | |
| ! | CGATGTTTGGTAACAAAGTT+TGG | - | chr1_3:17248965-17248984 | None:intergenic | 35.0% |
| AAAGGGAAATACACGATGTT+TGG | - | chr1_3:17248978-17248997 | None:intergenic | 35.0% | |
| CAAAGTCCAAAGTGAATCAA+AGG | - | chr1_3:17249197-17249216 | None:intergenic | 35.0% | |
| ! | GGTGAAAAAAACCTCACTTT+TGG | - | chr1_3:17249239-17249258 | None:intergenic | 35.0% |
| CAAAATTGGAGTGAGATGAA+GGG | - | chr1_3:17249345-17249364 | None:intergenic | 35.0% | |
| TCAAAATTGGAGTGAGATGA+AGG | - | chr1_3:17249346-17249365 | None:intergenic | 35.0% | |
| !! | ATCTCACTCCAATTTTGAAG+TGG | + | chr1_3:17249348-17249367 | Msa0107240:CDS | 35.0% |
| TACTTGGATGCAAATAAAGC+TGG | + | chr1_3:17249526-17249545 | Msa0107240:CDS | 35.0% | |
| TTCTTGAATATTGCAGGACT+AGG | + | chr1_3:17249621-17249640 | Msa0107240:exon | 35.0% | |
| TGATGGGATTGTTTCGTTTG+GGG | - | chr1_3:17244370-17244389 | None:intergenic | 40.0% | |
| ! | GTTGATGGGATTGTTTCGTT+TGG | - | chr1_3:17244372-17244391 | None:intergenic | 40.0% |
| ACAGATCATTACTGCGTTGT+CGG | - | chr1_3:17244410-17244429 | None:intergenic | 40.0% | |
| CGACGATAAAAATGACTCGT+CGG | + | chr1_3:17244473-17244492 | Msa0107240:CDS | 40.0% | |
| GATAAAAATGACTCGTCGGT+TGG | + | chr1_3:17244477-17244496 | Msa0107240:CDS | 40.0% | |
| ! | TTCAGCTCTTTTTCTCTCTC+TGG | - | chr1_3:17244705-17244724 | None:intergenic | 40.0% |
| TAGTGGAATTAAACGCGATG+AGG | + | chr1_3:17244793-17244812 | Msa0107240:CDS | 40.0% | |
| GGAGTATGGATTTGATGAGA+TGG | + | chr1_3:17244896-17244915 | Msa0107240:CDS | 40.0% | |
| GTATGGATTTGATGAGATGG+TGG | + | chr1_3:17244899-17244918 | Msa0107240:CDS | 40.0% | |
| !! | ATTTGATGAGATGGTGGAAG+TGG | + | chr1_3:17244905-17244924 | Msa0107240:CDS | 40.0% |
| AAAGGAGGATGAGATAGTGA+AGG | + | chr1_3:17244929-17244948 | Msa0107240:CDS | 40.0% | |
| CAGCTTCTTGTAAGAAACCA+TGG | + | chr1_3:17245044-17245063 | Msa0107240:CDS | 40.0% | |
| CCTTGTGATGAACATAACCA+TGG | - | chr1_3:17245064-17245083 | None:intergenic | 40.0% | |
| CCATGGTTATGTTCATCACA+AGG | + | chr1_3:17245061-17245080 | Msa0107240:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr1_3:17245590-17245609 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr1_3:17245589-17245608 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr1_3:17245589-17245608 | Msa0107240:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr1_3:17245590-17245609 | Msa0107240:intron | 40.0% | |
| CATATGTCATGTGCCAACAA+TGG | + | chr1_3:17245658-17245677 | Msa0107240:intron | 40.0% | |
| ! | TCATGTGCCAACAATGGATT+TGG | + | chr1_3:17245664-17245683 | Msa0107240:intron | 40.0% |
| ACAAGCTGACACCTTGAAAA+TGG | + | chr1_3:17245883-17245902 | Msa0107240:intron | 40.0% | |
| GATAAGGTAGAAGTTCCGTT+TGG | + | chr1_3:17246364-17246383 | Msa0107240:intron | 40.0% | |
| GATTTCAAGAAGCGACCAAA+CGG | - | chr1_3:17246382-17246401 | None:intergenic | 40.0% | |
| !! | TGTGTGATTGGTTGCACTTT+TGG | - | chr1_3:17246451-17246470 | None:intergenic | 40.0% |
| AACAAATGCTTAGGCTGTTG+AGG | + | chr1_3:17246736-17246755 | Msa0107240:intron | 40.0% | |
| ! | CACTTCATCCATCCTGTTTT+CGG | + | chr1_3:17246782-17246801 | Msa0107240:CDS | 40.0% |
| ! | ACTTCATCCATCCTGTTTTC+GGG | + | chr1_3:17246783-17246802 | Msa0107240:CDS | 40.0% |
| TTTCTTACCCGAAAACAGGA+TGG | - | chr1_3:17246793-17246812 | None:intergenic | 40.0% | |
| !!! | TAGGGAAAATGGTTTTGAGG+AGG | + | chr1_3:17246884-17246903 | Msa0107240:intron | 40.0% |
| !!! | AGGGAAAATGGTTTTGAGGA+GGG | + | chr1_3:17246885-17246904 | Msa0107240:intron | 40.0% |
| TTCAATGTCCATATCTGTGC+TGG | + | chr1_3:17247229-17247248 | Msa0107240:intron | 40.0% | |
| CACTAGCAGTTATGACAGTT+AGG | - | chr1_3:17247418-17247437 | None:intergenic | 40.0% | |
| ACTGTCATAACTGCTAGTGA+TGG | + | chr1_3:17247419-17247438 | Msa0107240:intron | 40.0% | |
| TGCAAACTACCTATGAGCTA+TGG | - | chr1_3:17247453-17247472 | None:intergenic | 40.0% | |
| GCATGAAGCTAAATTTGGCA+TGG | - | chr1_3:17247533-17247552 | None:intergenic | 40.0% | |
| !! | CTTAGTTTTCACTACACGAC+TGG | + | chr1_3:17247693-17247712 | Msa0107240:intron | 40.0% |
| ! | TAGTTTTCACTACACGACTG+GGG | + | chr1_3:17247695-17247714 | Msa0107240:intron | 40.0% |
| ATTTGCCGGTATCAGCAATA+AGG | + | chr1_3:17247792-17247811 | Msa0107240:intron | 40.0% | |
| GGTATCAGCAATAAGGTTCT+TGG | + | chr1_3:17247799-17247818 | Msa0107240:intron | 40.0% | |
| TATCATAGCATGGATGACCA+TGG | - | chr1_3:17248075-17248094 | None:intergenic | 40.0% | |
| GATGTCCTCCAATCAAATAC+TGG | - | chr1_3:17248148-17248167 | None:intergenic | 40.0% | |
| AAGGGCTTGACTAAGGAATA+AGG | - | chr1_3:17248224-17248243 | None:intergenic | 40.0% | |
| TATTCCTTAGTCAAGCCCTT+TGG | + | chr1_3:17248224-17248243 | Msa0107240:CDS | 40.0% | |
| ! | CTTCTGTCATTTGTGCCAAA+GGG | - | chr1_3:17248242-17248261 | None:intergenic | 40.0% |
| AGTTACCAACGTTACATGGT+CGG | + | chr1_3:17248442-17248461 | Msa0107240:intron | 40.0% | |
| TCACAACTCAACAAACGTTC+GGG | - | chr1_3:17248773-17248792 | None:intergenic | 40.0% | |
| GTCACAACTCAACAAACGTT+CGG | - | chr1_3:17248774-17248793 | None:intergenic | 40.0% | |
| ! | ACGTTTGTTGAGTTGTGACT+TGG | + | chr1_3:17248775-17248794 | Msa0107240:intron | 40.0% |
| ! | CGTTTGTTGAGTTGTGACTT+GGG | + | chr1_3:17248776-17248795 | Msa0107240:intron | 40.0% |
| ! | GTTTGTTGAGTTGTGACTTG+GGG | + | chr1_3:17248777-17248796 | Msa0107240:intron | 40.0% |
| ! | AACCGGAGTTGTTGTTCTAA+CGG | + | chr1_3:17249023-17249042 | Msa0107240:intron | 40.0% |
| CTAAATCAAGCCCAAAAGTG+AGG | + | chr1_3:17249225-17249244 | Msa0107240:CDS | 40.0% | |
| AACTCTTCAGCAACTCTACA+AGG | - | chr1_3:17249260-17249279 | None:intergenic | 40.0% | |
| TGCAACTAGAGAGTTCTTAG+AGG | + | chr1_3:17249286-17249305 | Msa0107240:CDS | 40.0% | |
| AGAGAGTTCTTAGAGGATGA+TGG | + | chr1_3:17249293-17249312 | Msa0107240:CDS | 40.0% | |
| TTGAAGTTGACCTAGAGAAG+AGG | + | chr1_3:17249318-17249337 | Msa0107240:CDS | 40.0% | |
| !!! | TGCAGGTACAGTGTTGATTT+TGG | + | chr1_3:17249469-17249488 | Msa0107240:intron | 40.0% |
| TTGACACATCTCTTAGCTGA+TGG | + | chr1_3:17249553-17249572 | Msa0107240:CDS | 40.0% | |
| !!! | GGTTTTGGGAGAAGTGAATG+AGG | - | chr1_3:17244321-17244340 | None:intergenic | 45.0% |
| !!! | AAACAGGGGGTGTTGGTTTT+GGG | - | chr1_3:17244335-17244354 | None:intergenic | 45.0% |
| ! | GAATTTGAAACAGGGGGTGT+TGG | - | chr1_3:17244342-17244361 | None:intergenic | 45.0% |
| ! | GGGTGTGAATTTGAAACAGG+GGG | - | chr1_3:17244348-17244367 | None:intergenic | 45.0% |
| ! | GGGGTGTGAATTTGAAACAG+GGG | - | chr1_3:17244349-17244368 | None:intergenic | 45.0% |
| ! | GGGGGTGTGAATTTGAAACA+GGG | - | chr1_3:17244350-17244369 | None:intergenic | 45.0% |
| ATGGGATTGTTTCGTTTGGG+GGG | - | chr1_3:17244368-17244387 | None:intergenic | 45.0% | |
| GATGGGATTGTTTCGTTTGG+GGG | - | chr1_3:17244369-17244388 | None:intergenic | 45.0% | |
| GTGACAGAGTTCAATCTCTC+CGG | + | chr1_3:17244513-17244532 | Msa0107240:CDS | 45.0% | |
| TTCAACGACAAGCTAATCGG+TGG | + | chr1_3:17244768-17244787 | Msa0107240:CDS | 45.0% | |
| !! | CAAGCTAATCGGTGGATTAG+TGG | + | chr1_3:17244776-17244795 | Msa0107240:CDS | 45.0% |
| ! | ATTTTCCGGTGATATTCCGG+TGG | + | chr1_3:17244869-17244888 | Msa0107240:CDS | 45.0% |
| !! | TGAGATGGTGGAAGTGGAAA+AGG | + | chr1_3:17244911-17244930 | Msa0107240:CDS | 45.0% |
| ! | TTCAAGGTGTCAGCTTGTGT+AGG | - | chr1_3:17245881-17245900 | None:intergenic | 45.0% |
| GTGGAAATGCGGAAATCTCA+CGG | - | chr1_3:17246322-17246341 | None:intergenic | 45.0% | |
| TCCGCATTTCCACAGAATCA+CGG | + | chr1_3:17246329-17246348 | Msa0107240:intron | 45.0% | |
| ACGGCGAGATTTCGTTGATA+AGG | + | chr1_3:17246348-17246367 | Msa0107240:intron | 45.0% | |
| !! | GTGATTGGTTGCACTTTTGG+TGG | - | chr1_3:17246448-17246467 | None:intergenic | 45.0% |
| AATGCTTAGGCTGTTGAGGT+TGG | + | chr1_3:17246740-17246759 | Msa0107240:intron | 45.0% | |
| CACTATCATTTGTAGCACCC+CGG | - | chr1_3:17246968-17246987 | None:intergenic | 45.0% | |
| !! | CTTGGTTCTACCGAGAAATG+TGG | + | chr1_3:17247254-17247273 | Msa0107240:intron | 45.0% |
| ATGTCAAGGTGCACGATACA+AGG | + | chr1_3:17247365-17247384 | Msa0107240:intron | 45.0% | |
| ! | CATAACTGCTAGTGATGGTG+TGG | + | chr1_3:17247424-17247443 | Msa0107240:intron | 45.0% |
| TTGCTGATACCGGCAAATTC+AGG | - | chr1_3:17247790-17247809 | None:intergenic | 45.0% | |
| CAGGTATGTAAACATGACGC+AGG | + | chr1_3:17247977-17247996 | Msa0107240:intron | 45.0% | |
| GTGATCTTCGATTGCTTCTG+AGG | - | chr1_3:17248202-17248221 | None:intergenic | 45.0% | |
| ! | CCTTCTGTCATTTGTGCCAA+AGG | - | chr1_3:17248243-17248262 | None:intergenic | 45.0% |
| CCTTTGGCACAAATGACAGA+AGG | + | chr1_3:17248240-17248259 | Msa0107240:CDS | 45.0% | |
| CACAAATGACAGAAGGCTAG+AGG | + | chr1_3:17248247-17248266 | Msa0107240:CDS | 45.0% | |
| AGTAAAAGGGTCATGCATGC+AGG | - | chr1_3:17248370-17248389 | None:intergenic | 45.0% | |
| TCTAGATTCTAGGTCCACCA+AGG | - | chr1_3:17248417-17248436 | None:intergenic | 45.0% | |
| TAAGACCGACCATGTAACGT+TGG | - | chr1_3:17248450-17248469 | None:intergenic | 45.0% | |
| ATGGTCGGTCTTACTAGAAC+TGG | + | chr1_3:17248457-17248476 | Msa0107240:intron | 45.0% | |
| GGAAGGGGAAATTCCACAAT+AGG | + | chr1_3:17248539-17248558 | Msa0107240:intron | 45.0% | |
| AGGGGAAATTCCACAATAGG+TGG | + | chr1_3:17248542-17248561 | Msa0107240:intron | 45.0% | |
| TTGAACCGTTCATCTGGGTT+GGG | - | chr1_3:17248822-17248841 | None:intergenic | 45.0% | |
| AACCCAGATGAACGGTTCAA+GGG | + | chr1_3:17248822-17248841 | Msa0107240:intron | 45.0% | |
| TTCCCTTGAACCGTTCATCT+GGG | - | chr1_3:17248827-17248846 | None:intergenic | 45.0% | |
| ATTCCCTTGAACCGTTCATC+TGG | - | chr1_3:17248828-17248847 | None:intergenic | 45.0% | |
| ACACATCTCTTAGCTGATGG+TGG | + | chr1_3:17249556-17249575 | Msa0107240:CDS | 45.0% | |
| !!! | TTTTAAGTTTTTTTTTTTTT+TGG | + | chr1_3:17245146-17245165 | Msa0107240:intron | 5.0% |
| !! | AATTTAAAAGAAATATTTAA+TGG | + | chr1_3:17245320-17245339 | Msa0107240:intron | 5.0% |
| !!! | GAAACAGGGGGTGTTGGTTT+TGG | - | chr1_3:17244336-17244355 | None:intergenic | 50.0% |
| ! | GGGGGGTGTGAATTTGAAAC+AGG | - | chr1_3:17244351-17244370 | None:intergenic | 50.0% |
| AACGACGACAGCTTGTCGTT+GGG | - | chr1_3:17244567-17244586 | None:intergenic | 50.0% | |
| AACGACAAGCTGTCGTCGTT+GGG | + | chr1_3:17244567-17244586 | Msa0107240:CDS | 50.0% | |
| AACGCGATGAGGAAGAACGA+AGG | + | chr1_3:17244804-17244823 | Msa0107240:CDS | 50.0% | |
| !! | GATGGTGGAAGTGGAAAAGG+AGG | + | chr1_3:17244914-17244933 | Msa0107240:CDS | 50.0% |
| GCCGTGATTCTGTGGAAATG+CGG | - | chr1_3:17246333-17246352 | None:intergenic | 50.0% | |
| GAAATCTCGCCGTGATTCTG+TGG | - | chr1_3:17246341-17246360 | None:intergenic | 50.0% | |
| ! | CAGACTGCAGCTGCACTTTT+CGG | - | chr1_3:17246993-17247012 | None:intergenic | 50.0% |
| ! | TCCATATCTGTGCTGGTGCT+TGG | + | chr1_3:17247236-17247255 | Msa0107240:intron | 50.0% |
| ACCAAGCACCAGCACAGATA+TGG | - | chr1_3:17247240-17247259 | None:intergenic | 50.0% | |
| TGTGCCAAAGGGCTTGACTA+AGG | - | chr1_3:17248231-17248250 | None:intergenic | 50.0% | |
| ! | ATCCTTAGGGCCGACTCATA+AGG | - | chr1_3:17248316-17248335 | None:intergenic | 50.0% |
| ACATGGCTGACCACCTATTG+TGG | - | chr1_3:17248555-17248574 | None:intergenic | 50.0% | |
| GAGTCATAGTTACCGCCCTT+TGG | + | chr1_3:17248741-17248760 | Msa0107240:intron | 50.0% | |
| ! | TGAGTTGTGACTTGGGGATG+AGG | + | chr1_3:17248783-17248802 | Msa0107240:intron | 50.0% |
| ! | GAGTTGTGACTTGGGGATGA+GGG | + | chr1_3:17248784-17248803 | Msa0107240:intron | 50.0% |
| ACAAGCCCAACCCAGATGAA+CGG | + | chr1_3:17248814-17248833 | Msa0107240:intron | 50.0% | |
| CTTGAACCGTTCATCTGGGT+TGG | - | chr1_3:17248823-17248842 | None:intergenic | 50.0% | |
| CAACCCAGATGAACGGTTCA+AGG | + | chr1_3:17248821-17248840 | Msa0107240:intron | 50.0% | |
| CGCCGTTAGAACAACAACTC+CGG | - | chr1_3:17249028-17249047 | None:intergenic | 50.0% | |
| GATGAAGGGTCCTCTTCTCT+AGG | - | chr1_3:17249331-17249350 | None:intergenic | 50.0% | |
| ACGACGACAGCTTGTCGTTG+GGG | - | chr1_3:17244566-17244585 | None:intergenic | 55.0% | |
| CAACGACGACAGCTTGTCGT+TGG | - | chr1_3:17244568-17244587 | None:intergenic | 55.0% | |
| CAACGACAAGCTGTCGTCGT+TGG | + | chr1_3:17244566-17244585 | Msa0107240:CDS | 55.0% | |
| ACGACAAGCTGTCGTCGTTG+GGG | + | chr1_3:17244568-17244587 | Msa0107240:CDS | 55.0% | |
| GCGATGAGGAAGAACGAAGG+CGG | + | chr1_3:17244807-17244826 | Msa0107240:CDS | 55.0% | |
| !! | AATCCATACTCCGGTGCCAC+CGG | - | chr1_3:17244888-17244907 | None:intergenic | 55.0% |
| GTGCAGCTGCAGTCTGTGAT+AGG | + | chr1_3:17246997-17247016 | Msa0107240:CDS | 55.0% | |
| GTGTGGCAGCCATAGCTCAT+AGG | + | chr1_3:17247441-17247460 | Msa0107240:intron | 55.0% | |
| ACATGACGCAGGATCTGCAG+CGG | + | chr1_3:17247988-17248007 | Msa0107240:CDS | 55.0% | |
| TGCCTTATGAGTCGGCCCTA+AGG | + | chr1_3:17248311-17248330 | Msa0107240:intron | 55.0% | |
| TAGTTACCGCCCTTTGGTCC+AGG | + | chr1_3:17248747-17248766 | Msa0107240:intron | 55.0% | |
| ACTCAACAAACGTTCGGGCC+TGG | - | chr1_3:17248768-17248787 | None:intergenic | 55.0% | |
| ! | TTGTGACTTGGGGATGAGGG+TGG | + | chr1_3:17248787-17248806 | Msa0107240:intron | 55.0% |
| !! | CGGTGCCACCGGAATATCAC+CGG | - | chr1_3:17244877-17244896 | None:intergenic | 60.0% |
| CGGTGATATTCCGGTGGCAC+CGG | + | chr1_3:17244875-17244894 | Msa0107240:CDS | 60.0% | |
| ! | ATTCCGGTGGCACCGGAGTA+TGG | + | chr1_3:17244882-17244901 | Msa0107240:CDS | 60.0% |
| CATGACGCAGGATCTGCAGC+GGG | + | chr1_3:17247989-17248008 | Msa0107240:CDS | 60.0% | |
| ACGTTCGGGCCTGGACCAAA+GGG | - | chr1_3:17248759-17248778 | None:intergenic | 60.0% | |
| AACGTTCGGGCCTGGACCAA+AGG | - | chr1_3:17248760-17248779 | None:intergenic | 60.0% | |
| TTCGGGCCTGGACCAAAGGG+CGG | - | chr1_3:17248756-17248775 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 17244192 | 17249654 | 17244192 | ID=Msa0107240;Name=Msa0107240 |
| chr1_3 | mRNA | 17244192 | 17249654 | 17244192 | ID=Msa0107240-mRNA-1;Parent=Msa0107240;Name=Msa0107240-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.83|1|1|1|6|27|605 |
| chr1_3 | exon | 17244192 | 17245082 | 17244192 | ID=Msa0107240-mRNA-1:exon:6514;Parent=Msa0107240-mRNA-1 |
| chr1_3 | exon | 17246749 | 17246804 | 17246749 | ID=Msa0107240-mRNA-1:exon:6515;Parent=Msa0107240-mRNA-1 |
| chr1_3 | exon | 17246887 | 17247117 | 17246887 | ID=Msa0107240-mRNA-1:exon:6516;Parent=Msa0107240-mRNA-1 |
| chr1_3 | exon | 17247980 | 17248268 | 17247980 | ID=Msa0107240-mRNA-1:exon:6517;Parent=Msa0107240-mRNA-1 |
| chr1_3 | exon | 17249173 | 17249369 | 17249173 | ID=Msa0107240-mRNA-1:exon:6518;Parent=Msa0107240-mRNA-1 |
| chr1_3 | exon | 17249474 | 17249654 | 17249474 | ID=Msa0107240-mRNA-1:exon:6519;Parent=Msa0107240-mRNA-1 |
| chr1_3 | CDS | 17244192 | 17245082 | 17244192 | ID=Msa0107240-mRNA-1:cds;Parent=Msa0107240-mRNA-1 |
| chr1_3 | CDS | 17246749 | 17246804 | 17246749 | ID=Msa0107240-mRNA-1:cds;Parent=Msa0107240-mRNA-1 |
| chr1_3 | CDS | 17246887 | 17247117 | 17246887 | ID=Msa0107240-mRNA-1:cds;Parent=Msa0107240-mRNA-1 |
| chr1_3 | CDS | 17247980 | 17248268 | 17247980 | ID=Msa0107240-mRNA-1:cds;Parent=Msa0107240-mRNA-1 |
| chr1_3 | CDS | 17249173 | 17249369 | 17249173 | ID=Msa0107240-mRNA-1:cds;Parent=Msa0107240-mRNA-1 |
| chr1_3 | CDS | 17249474 | 17249627 | 17249474 | ID=Msa0107240-mRNA-1:cds;Parent=Msa0107240-mRNA-1 |
| chr1_3 | three_prime_UTR | 17249628 | 17249654 | 17249628 | ID=Msa0107240-mRNA-1:three_prime_utr;Parent=Msa0107240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
