Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379570 | XP_013461687.1 | 98.496 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 7.10e-92 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379570 | sp|Q8VXX9|BETL1_ARATH | 67.188 | 128 | 40 | 2 | 7 | 133 | 11 | 137 | 1.27e-60 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379570 | A0A072V1K5 | 98.496 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 3.39e-92 | 271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa0379570 | 0.824601 | 7.387603e-54 | -8.615850e-47 |
| Msa0010490 | Msa0379570 | 0.809637 | 1.714743e-50 | -8.615850e-47 |
| Msa0010500 | Msa0379570 | 0.818931 | 1.514734e-52 | -8.615850e-47 |
| Msa0017320 | Msa0379570 | 0.803205 | 3.895521e-49 | -8.615850e-47 |
| Msa0020390 | Msa0379570 | 0.876640 | 1.189376e-68 | -8.615850e-47 |
| Msa0020410 | Msa0379570 | 0.825132 | 5.537705e-54 | -8.615850e-47 |
| Msa0026910 | Msa0379570 | 0.804738 | 1.870636e-49 | -8.615850e-47 |
| Msa0029260 | Msa0379570 | 0.805802 | 1.119663e-49 | -8.615850e-47 |
| Msa0030300 | Msa0379570 | 0.804841 | 1.779995e-49 | -8.615850e-47 |
| Msa0033880 | Msa0379570 | 0.813925 | 1.999378e-51 | -8.615850e-47 |
| Msa0037840 | Msa0379570 | 0.823313 | 1.481546e-53 | -8.615850e-47 |
| Msa0037880 | Msa0379570 | 0.817168 | 3.793700e-52 | -8.615850e-47 |
| Msa0038870 | Msa0379570 | 0.830137 | 3.478446e-55 | -8.615850e-47 |
| Msa0057750 | Msa0379570 | 0.832838 | 7.520951e-56 | -8.615850e-47 |
| Msa0065650 | Msa0379570 | 0.801612 | 8.293080e-49 | -8.615850e-47 |
| Msa0074750 | Msa0379570 | 0.816138 | 6.453209e-52 | -8.615850e-47 |
| Msa0081650 | Msa0379570 | 0.810463 | 1.138378e-50 | -8.615850e-47 |
| Msa0086420 | Msa0379570 | 0.817337 | 3.474523e-52 | -8.615850e-47 |
| Msa0090520 | Msa0379570 | 0.801948 | 7.077347e-49 | -8.615850e-47 |
| Msa0090550 | Msa0379570 | 0.844601 | 6.835295e-59 | -8.615850e-47 |
| Msa0091610 | Msa0379570 | 0.802977 | 4.342765e-49 | -8.615850e-47 |
| Msa0093010 | Msa0379570 | 0.810119 | 1.350377e-50 | -8.615850e-47 |
| Msa0097590 | Msa0379570 | 0.818362 | 2.039496e-52 | -8.615850e-47 |
| Msa0097610 | Msa0379570 | 0.821023 | 5.033756e-53 | -8.615850e-47 |
| Msa0101180 | Msa0379570 | 0.801493 | 8.772424e-49 | -8.615850e-47 |
| Msa0103070 | Msa0379570 | 0.833832 | 4.251968e-56 | -8.615850e-47 |
| Msa0103790 | Msa0379570 | 0.821150 | 4.705964e-53 | -8.615850e-47 |
| Msa0104800 | Msa0379570 | 0.822408 | 2.406859e-53 | -8.615850e-47 |
| Msa0109590 | Msa0379570 | 0.800283 | 1.550124e-48 | -8.615850e-47 |
| Msa0118540 | Msa0379570 | 0.829781 | 4.248859e-55 | -8.615850e-47 |
| Msa0127850 | Msa0379570 | 0.812813 | 3.509483e-51 | -8.615850e-47 |
| Msa0137990 | Msa0379570 | 0.804052 | 2.599061e-49 | -8.615850e-47 |
| Msa0138020 | Msa0379570 | 0.801734 | 7.830435e-49 | -8.615850e-47 |
| Msa0139670 | Msa0379570 | 0.801170 | 1.021865e-48 | -8.615850e-47 |
| Msa0142500 | Msa0379570 | 0.815557 | 8.699472e-52 | -8.615850e-47 |
| Msa0150260 | Msa0379570 | 0.823216 | 1.560515e-53 | -8.615850e-47 |
| Msa0150840 | Msa0379570 | 0.808589 | 2.875575e-50 | -8.615850e-47 |
| Msa0154920 | Msa0379570 | 0.804721 | 1.885419e-49 | -8.615850e-47 |
| Msa0156700 | Msa0379570 | 0.805890 | 1.072902e-49 | -8.615850e-47 |
| Msa0167980 | Msa0379570 | 0.859752 | 3.327947e-63 | -8.615850e-47 |
| Msa0169300 | Msa0379570 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
| Msa0180500 | Msa0379570 | 0.811338 | 7.361551e-51 | -8.615850e-47 |
| Msa0183850 | Msa0379570 | 0.821291 | 4.366439e-53 | -8.615850e-47 |
| Msa0183870 | Msa0379570 | 0.866069 | 3.731606e-65 | -8.615850e-47 |
| Msa0186310 | Msa0379570 | 0.801180 | 1.017027e-48 | -8.615850e-47 |
| Msa0187230 | Msa0379570 | 0.815879 | 7.372883e-52 | -8.615850e-47 |
| Msa0188350 | Msa0379570 | 0.818064 | 2.382588e-52 | -8.615850e-47 |
| Msa0191070 | Msa0379570 | 0.831005 | 2.133042e-55 | -8.615850e-47 |
| Msa0197650 | Msa0379570 | 0.817847 | 2.666021e-52 | -8.615850e-47 |
| Msa0206690 | Msa0379570 | 0.815952 | 7.101949e-52 | -8.615850e-47 |
| Msa0207040 | Msa0379570 | -0.805295 | 1.429974e-49 | -8.615850e-47 |
| Msa0207350 | Msa0379570 | 0.800603 | 1.333956e-48 | -8.615850e-47 |
| Msa0207410 | Msa0379570 | 0.809967 | 1.456088e-50 | -8.615850e-47 |
| Msa0209080 | Msa0379570 | 0.804304 | 2.303243e-49 | -8.615850e-47 |
| Msa0223330 | Msa0379570 | 0.805857 | 1.090041e-49 | -8.615850e-47 |
| Msa0233370 | Msa0379570 | 0.821777 | 3.371517e-53 | -8.615850e-47 |
| Msa0365860 | Msa0379570 | 0.830056 | 3.640141e-55 | -8.615850e-47 |
| Msa0378970 | Msa0379570 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa0379570 | Msa0380100 | 0.806579 | 7.681665e-50 | -8.615850e-47 |
| Msa0379570 | Msa0382370 | 0.819430 | 1.166041e-52 | -8.615850e-47 |
| Msa0379570 | Msa0384880 | 0.810262 | 1.258269e-50 | -8.615850e-47 |
| Msa0379570 | Msa0385490 | 0.827909 | 1.205639e-54 | -8.615850e-47 |
| Msa0379570 | Msa0385500 | 0.806525 | 7.886480e-50 | -8.615850e-47 |
| Msa0379570 | Msa0389210 | 0.825315 | 5.013603e-54 | -8.615850e-47 |
| Msa0379570 | Msa0389510 | 0.810005 | 1.429368e-50 | -8.615850e-47 |
| Msa0379570 | Msa0392270 | 0.807590 | 4.692237e-50 | -8.615850e-47 |
| Msa0379570 | Msa0403770 | 0.822604 | 2.167159e-53 | -8.615850e-47 |
| Msa0379570 | Msa0408390 | 0.806586 | 7.653507e-50 | -8.615850e-47 |
| Msa0379570 | Msa0428050 | 0.803701 | 3.075030e-49 | -8.615850e-47 |
| Msa0379570 | Msa0429020 | 0.833038 | 6.706641e-56 | -8.615850e-47 |
| Msa0379570 | Msa0430950 | 0.801823 | 7.507708e-49 | -8.615850e-47 |
| Msa0379570 | Msa0432160 | 0.813665 | 2.282043e-51 | -8.615850e-47 |
| Msa0379570 | Msa0435690 | 0.816045 | 6.771378e-52 | -8.615850e-47 |
| Msa0379570 | Msa0450400 | -0.820956 | 5.215771e-53 | -8.615850e-47 |
| Msa0379570 | Msa0468320 | 0.837346 | 5.487106e-57 | -8.615850e-47 |
| Msa0379570 | Msa0476680 | 0.810686 | 1.018868e-50 | -8.615850e-47 |
| Msa0379570 | Msa0481280 | 0.801769 | 7.701016e-49 | -8.615850e-47 |
| Msa0379570 | Msa0481970 | 0.801951 | 7.067255e-49 | -8.615850e-47 |
| Msa0379570 | Msa0483740 | 0.807018 | 6.203674e-50 | -8.615850e-47 |
| Msa0379570 | Msa0484740 | 0.804580 | 2.017652e-49 | -8.615850e-47 |
| Msa0379570 | Msa0517090 | 0.819947 | 8.888426e-53 | -8.615850e-47 |
| Msa0379570 | Msa0517640 | 0.818885 | 1.552008e-52 | -8.615850e-47 |
| Msa0379570 | Msa0518170 | 0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0379570 | Msa0518440 | 0.807683 | 4.483199e-50 | -8.615850e-47 |
| Msa0379570 | Msa0520270 | 0.811925 | 5.484865e-51 | -8.615850e-47 |
| Msa0379570 | Msa0521010 | 0.814055 | 1.871912e-51 | -8.615850e-47 |
| Msa0379570 | Msa0521670 | 0.828868 | 7.078565e-55 | -8.615850e-47 |
| Msa0379570 | Msa0527740 | 0.807639 | 4.580896e-50 | -8.615850e-47 |
| Msa0379570 | Msa0532980 | 0.819360 | 1.210016e-52 | -8.615850e-47 |
| Msa0379570 | Msa0532990 | 0.800036 | 1.739886e-48 | -8.615850e-47 |
| Msa0379570 | Msa0534050 | 0.823991 | 1.027758e-53 | -8.615850e-47 |
| Msa0379570 | Msa0542290 | 0.801851 | 7.407764e-49 | -8.615850e-47 |
| Msa0379570 | Msa0547990 | 0.814701 | 1.347284e-51 | -8.615850e-47 |
| Msa0379570 | Msa0549780 | 0.808004 | 3.831468e-50 | -8.615850e-47 |
| Msa0379570 | Msa0555640 | 0.802998 | 4.299506e-49 | -8.615850e-47 |
| Msa0379570 | Msa0560500 | 0.815268 | 1.008584e-51 | -8.615850e-47 |
| Msa0379570 | Msa0567240 | 0.815276 | 1.004619e-51 | -8.615850e-47 |
| Msa0379570 | Msa0576730 | 0.808161 | 3.547816e-50 | -8.615850e-47 |
| Msa0379570 | Msa0580230 | 0.807827 | 4.179041e-50 | -8.615850e-47 |
| Msa0379570 | Msa0610130 | 0.818122 | 2.310531e-52 | -8.615850e-47 |
| Msa0379570 | Msa0618950 | 0.804706 | 1.899167e-49 | -8.615850e-47 |
| Msa0379570 | Msa0618970 | 0.808104 | 3.648567e-50 | -8.615850e-47 |
| Msa0379570 | Msa0620620 | 0.813730 | 2.207526e-51 | -8.615850e-47 |
| Msa0379570 | Msa0644660 | 0.806672 | 7.341423e-50 | -8.615850e-47 |
| Msa0379570 | Msa0659210 | 0.812150 | 4.900942e-51 | -8.615850e-47 |
| Msa0379570 | Msa0661710 | 0.811613 | 6.414136e-51 | -8.615850e-47 |
| Msa0379570 | Msa0662630 | 0.824128 | 9.545598e-54 | -8.615850e-47 |
| Msa0379570 | Msa0663910 | 0.803161 | 3.978687e-49 | -8.615850e-47 |
| Msa0379570 | Msa0672100 | 0.800476 | 1.416028e-48 | -8.615850e-47 |
| Msa0379570 | Msa0682090 | 0.803493 | 3.395293e-49 | -8.615850e-47 |
| Msa0379570 | Msa0682140 | 0.805377 | 1.374515e-49 | -8.615850e-47 |
| Msa0379570 | Msa0697720 | 0.801701 | 7.952533e-49 | -8.615850e-47 |
| Msa0379570 | Msa0702270 | 0.805978 | 1.028304e-49 | -8.615850e-47 |
| Msa0379570 | Msa0703910 | 0.811414 | 7.085580e-51 | -8.615850e-47 |
| Msa0379570 | Msa0705190 | 0.830592 | 2.692298e-55 | -8.615850e-47 |
| Msa0379570 | Msa0705390 | 0.821351 | 4.228447e-53 | -8.615850e-47 |
| Msa0379570 | Msa0705990 | 0.820819 | 5.606888e-53 | -8.615850e-47 |
| Msa0379570 | Msa0711150 | 0.802881 | 4.546456e-49 | -8.615850e-47 |
| Msa0379570 | Msa0726080 | 0.807097 | 5.970948e-50 | -8.615850e-47 |
| Msa0379570 | Msa0732600 | 0.800698 | 1.275677e-48 | -8.615850e-47 |
| Msa0379570 | Msa0748730 | 0.807346 | 5.287074e-50 | -8.615850e-47 |
| Msa0379570 | Msa0748920 | 0.821730 | 3.456496e-53 | -8.615850e-47 |
| Msa0379570 | Msa0749440 | 0.815079 | 1.110902e-51 | -8.615850e-47 |
| Msa0379570 | Msa0750650 | 0.816820 | 4.540971e-52 | -8.615850e-47 |
| Msa0379570 | Msa0750850 | 0.811054 | 8.482313e-51 | -8.615850e-47 |
| Msa0379570 | Msa0765180 | 0.810265 | 1.255910e-50 | -8.615850e-47 |
| Msa0379570 | Msa0784380 | 0.813531 | 2.441470e-51 | -8.615850e-47 |
| Msa0379570 | Msa0800370 | 0.848681 | 5.248303e-60 | -8.615850e-47 |
| Msa0379570 | Msa0818170 | 0.811150 | 8.084450e-51 | -8.615850e-47 |
| Msa0379570 | Msa0822310 | -0.804367 | 2.234712e-49 | -8.615850e-47 |
| Msa0379570 | Msa0822500 | 0.801032 | 1.090097e-48 | -8.615850e-47 |
| Msa0379570 | Msa0826760 | 0.815366 | 9.591178e-52 | -8.615850e-47 |
| Msa0379570 | Msa0827280 | 0.816653 | 4.948804e-52 | -8.615850e-47 |
| Msa0379570 | Msa0837780 | 0.828591 | 8.255373e-55 | -8.615850e-47 |
| Msa0379570 | Msa0844390 | 0.809380 | 1.947585e-50 | -8.615850e-47 |
| Msa0379570 | Msa0844420 | 0.812179 | 4.828642e-51 | -8.615850e-47 |
| Msa0379570 | Msa0844440 | 0.811170 | 8.005072e-51 | -8.615850e-47 |
| Msa0379570 | Msa0846230 | 0.809366 | 1.960614e-50 | -8.615850e-47 |
| Msa0379570 | Msa0861470 | 0.824536 | 7.653098e-54 | -8.615850e-47 |
| Msa0379570 | Msa0861570 | 0.819291 | 1.254799e-52 | -8.615850e-47 |
| Msa0379570 | Msa0866400 | 0.809889 | 1.513342e-50 | -8.615850e-47 |
| Msa0379570 | Msa0866410 | 0.801294 | 9.635841e-49 | -8.615850e-47 |
| Msa0379570 | Msa0879860 | 0.805181 | 1.511133e-49 | -8.615850e-47 |
| Msa0379570 | Msa0880810 | 0.806229 | 9.105958e-50 | -8.615850e-47 |
| Msa0379570 | Msa0890550 | 0.800083 | 1.701664e-48 | -8.615850e-47 |
| Msa0379570 | Msa0901110 | 0.805240 | 1.468482e-49 | -8.615850e-47 |
| Msa0379570 | Msa0903780 | 0.801667 | 8.080354e-49 | -8.615850e-47 |
| Msa0379570 | Msa0923780 | 0.811767 | 5.937869e-51 | -8.615850e-47 |
| Msa0379570 | Msa0933380 | 0.812874 | 3.403660e-51 | -8.615850e-47 |
| Msa0379570 | Msa0944200 | 0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa0379570 | Msa0960740 | 0.832740 | 7.953874e-56 | -8.615850e-47 |
| Msa0379570 | Msa0971160 | 0.822923 | 1.826894e-53 | -8.615850e-47 |
| Msa0379570 | Msa0974950 | 0.839996 | 1.134169e-57 | -8.615850e-47 |
| Msa0379570 | Msa0980020 | 0.810904 | 9.140640e-51 | -8.615850e-47 |
| Msa0379570 | Msa0994370 | 0.846195 | 2.529530e-59 | -8.615850e-47 |
| Msa0379570 | Msa0994390 | 0.806143 | 9.490908e-50 | -8.615850e-47 |
| Msa0379570 | Msa1000930 | 0.800993 | 1.110343e-48 | -8.615850e-47 |
| Msa0379570 | Msa1025260 | 0.836015 | 1.198606e-56 | -8.615850e-47 |
| Msa0379570 | Msa1037520 | 0.820670 | 6.068268e-53 | -8.615850e-47 |
| Msa0379570 | Msa1042660 | 0.838745 | 2.395279e-57 | -8.615850e-47 |
| Msa0379570 | Msa1051210 | 0.803444 | 3.475830e-49 | -8.615850e-47 |
| Msa0379570 | Msa1063420 | 0.821725 | 3.465297e-53 | -8.615850e-47 |
| Msa0379570 | Msa1063510 | 0.801566 | 8.476536e-49 | -8.615850e-47 |
| Msa0379570 | Msa1064250 | 0.818064 | 2.382127e-52 | -8.615850e-47 |
| Msa0379570 | Msa1071320 | 0.823321 | 1.475216e-53 | -8.615850e-47 |
| Msa0379570 | Msa1072900 | 0.832259 | 1.046729e-55 | -8.615850e-47 |
| Msa0379570 | Msa1073830 | 0.804811 | 1.806066e-49 | -8.615850e-47 |
| Msa0379570 | Msa1081790 | -0.813658 | 2.289338e-51 | -8.615850e-47 |
| Msa0379570 | Msa1089320 | 0.837798 | 4.201404e-57 | -8.615850e-47 |
| Msa0379570 | Msa1095650 | 0.832718 | 8.056250e-56 | -8.615850e-47 |
| Msa0379570 | Msa1109350 | 0.838557 | 2.680155e-57 | -8.615850e-47 |
| Msa0379570 | Msa1111870 | 0.803022 | 4.250548e-49 | -8.615850e-47 |
| Msa0379570 | Msa1133230 | 0.819918 | 9.024373e-53 | -8.615850e-47 |
| Msa0379570 | Msa1133250 | 0.830146 | 3.461255e-55 | -8.615850e-47 |
| Msa0379570 | Msa1144040 | 0.801498 | 8.751594e-49 | -8.615850e-47 |
| Msa0379570 | Msa1163870 | 0.801408 | 9.134128e-49 | -8.615850e-47 |
| Msa0379570 | Msa1206310 | 0.830877 | 2.292243e-55 | -8.615850e-47 |
| Msa0379570 | Msa1206360 | 0.828915 | 6.894290e-55 | -8.615850e-47 |
| Msa0379570 | Msa1206650 | 0.804906 | 1.724778e-49 | -8.615850e-47 |
| Msa0379570 | Msa1214240 | 0.816969 | 4.204484e-52 | -8.615850e-47 |
| Msa0379570 | Msa1215920 | 0.809151 | 2.180551e-50 | -8.615850e-47 |
| Msa0379570 | Msa1218580 | 0.807522 | 4.851402e-50 | -8.615850e-47 |
| Msa0379570 | Msa1221330 | 0.800802 | 1.214625e-48 | -8.615850e-47 |
| Msa0379570 | Msa1250110 | 0.820300 | 7.375763e-53 | -8.615850e-47 |
| Msa0379570 | Msa1250730 | 0.804382 | 2.218559e-49 | -8.615850e-47 |
| Msa0379570 | Msa1253810 | 0.817741 | 2.817532e-52 | -8.615850e-47 |
| Msa0379570 | Msa1254730 | 0.812524 | 4.059089e-51 | -8.615850e-47 |
| Msa0379570 | Msa1265590 | 0.806235 | 9.077117e-50 | -8.615850e-47 |
| Msa0379570 | Msa1270660 | 0.821940 | 3.090882e-53 | -8.615850e-47 |
| Msa0379570 | Msa1276340 | 0.809539 | 1.800147e-50 | -8.615850e-47 |
| Msa0379570 | Msa1303580 | 0.813978 | 1.946398e-51 | -8.615850e-47 |
| Msa0379570 | Msa1307180 | 0.822428 | 2.381626e-53 | -8.615850e-47 |
| Msa0379570 | Msa1316360 | 0.825914 | 3.614489e-54 | -8.615850e-47 |
| Msa0379570 | Msa1316440 | 0.802244 | 6.151102e-49 | -8.615850e-47 |
| Msa0379570 | Msa1336560 | 0.845458 | 4.009958e-59 | -8.615850e-47 |
| Msa0379570 | Msa1355890 | 0.806599 | 7.607704e-50 | -8.615850e-47 |
| Msa0379570 | Msa1358670 | 0.826317 | 2.898325e-54 | -8.615850e-47 |
| Msa0379570 | Msa1359270 | 0.820149 | 7.988010e-53 | -8.615850e-47 |
| Msa0379570 | Msa1362420 | 0.802088 | 6.623423e-49 | -8.615850e-47 |
| Msa0379570 | Msa1364210 | 0.839913 | 1.192186e-57 | -8.615850e-47 |
| Msa0379570 | Msa1371940 | 0.814789 | 1.288033e-51 | -8.615850e-47 |
| Msa0379570 | Msa1376130 | 0.817029 | 4.076439e-52 | -8.615850e-47 |
| Msa0379570 | Msa1376650 | 0.809968 | 1.455488e-50 | -8.615850e-47 |
| Msa0379570 | Msa1377570 | 0.816079 | 6.652722e-52 | -8.615850e-47 |
| Msa0379570 | Msa1381480 | 0.833126 | 6.379333e-56 | -8.615850e-47 |
| Msa0379570 | Msa1382790 | 0.829539 | 4.865256e-55 | -8.615850e-47 |
| Msa0379570 | Msa1384870 | 0.801276 | 9.717735e-49 | -8.615850e-47 |
| Msa0379570 | Msa1389850 | 0.812114 | 4.988563e-51 | -8.615850e-47 |
| Msa0379570 | Msa1389880 | 0.815481 | 9.043855e-52 | -8.615850e-47 |
| Msa0379570 | Msa1407190 | 0.801228 | 9.939394e-49 | -8.615850e-47 |
| Msa0379570 | Msa1416370 | 0.828896 | 6.968897e-55 | -8.615850e-47 |
| Msa0379570 | Msa1428780 | 0.825759 | 3.933301e-54 | -8.615850e-47 |
| Msa0379570 | Msa1430410 | 0.810342 | 1.208830e-50 | -8.615850e-47 |
| Msa0379570 | Msa1436600 | 0.809816 | 1.569457e-50 | -8.615850e-47 |
| Msa0379570 | Msa1437270 | 0.802355 | 5.836250e-49 | -8.615850e-47 |
| Msa0379570 | Msa1447890 | 0.819016 | 1.448994e-52 | -8.615850e-47 |
| Msa0379570 | Msa1454680 | 0.807518 | 4.859792e-50 | -8.615850e-47 |
| Msa0379570 | Msa1454960 | 0.807390 | 5.175122e-50 | -8.615850e-47 |
| Msa0241140 | Msa0379570 | 0.816880 | 4.402026e-52 | -8.615850e-47 |
| Msa0249580 | Msa0379570 | 0.810705 | 1.009202e-50 | -8.615850e-47 |
| Msa0257490 | Msa0379570 | 0.848329 | 6.571232e-60 | -8.615850e-47 |
| Msa0257520 | Msa0379570 | 0.808608 | 2.848825e-50 | -8.615850e-47 |
| Msa0269470 | Msa0379570 | 0.822253 | 2.615285e-53 | -8.615850e-47 |
| Msa0271360 | Msa0379570 | 0.816548 | 5.224104e-52 | -8.615850e-47 |
| Msa0275010 | Msa0379570 | 0.830680 | 2.562068e-55 | -8.615850e-47 |
| Msa0281530 | Msa0379570 | 0.806318 | 8.718375e-50 | -8.615850e-47 |
| Msa0283420 | Msa0379570 | 0.801488 | 8.793303e-49 | -8.615850e-47 |
| Msa0296790 | Msa0379570 | 0.828331 | 9.540818e-55 | -8.615850e-47 |
| Msa0296820 | Msa0379570 | 0.839919 | 1.187690e-57 | -8.615850e-47 |
| Msa0296920 | Msa0379570 | 0.819330 | 1.229360e-52 | -8.615850e-47 |
| Msa0317970 | Msa0379570 | 0.811297 | 7.512832e-51 | -8.615850e-47 |
| Msa0320590 | Msa0379570 | 0.810000 | 1.432943e-50 | -8.615850e-47 |
| Msa0321690 | Msa0379570 | 0.810802 | 9.617368e-51 | -8.615850e-47 |
| Msa0347750 | Msa0379570 | 0.807241 | 5.563778e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379570 | MtrunA17_Chr3g0132601 | 98.496 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 6.53e-96 | 271 |
| Msa0379570 | MtrunA17_Chr5g0427101 | 75.758 | 132 | 30 | 2 | 2 | 133 | 3 | 132 | 8.74e-71 | 208 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379570 | AT4G14600.1 | 67.188 | 128 | 40 | 2 | 7 | 133 | 11 | 137 | 1.29e-61 | 186 |
| Msa0379570 | AT1G29060.1 | 64.662 | 133 | 45 | 2 | 2 | 133 | 3 | 134 | 7.06e-54 | 166 |
| Msa0379570 | AT1G29060.2 | 65.556 | 90 | 31 | 0 | 44 | 133 | 4 | 93 | 1.26e-36 | 120 |
Find 53 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGGAAAGCCTCACTTTC+TGG | 0.084284 | 3_1:+80743269 | None:intergenic |
| TTCGCTAGAACGAACAAATA+AGG | 0.247180 | 3_1:+80745369 | None:intergenic |
| CAATCTACCTGTTGCCTTGT+TGG | 0.267092 | 3_1:-80745463 | None:intergenic |
| GATTTCGAACTGTTTCTCTT+TGG | 0.323489 | 3_1:+80745424 | None:intergenic |
| GTTTCACTATTGTGTATCTT+TGG | 0.334276 | 3_1:-80743302 | Msa0379570:CDS |
| AGGGGCAGCATCGCCGTAAA+AGG | 0.359512 | 3_1:+80745263 | None:intergenic |
| TCGCTAGAACGAACAAATAA+GGG | 0.359962 | 3_1:+80745370 | None:intergenic |
| TCCAGAAAGTGAGGCTTTCC+AGG | 0.364908 | 3_1:-80743270 | Msa0379570:exon |
| TGCTGAGAGAAGTATCTTCC+TGG | 0.374992 | 3_1:+80743252 | None:intergenic |
| GGAGGACGCAGCAGGAGTTC+TGG | 0.386145 | 3_1:+80745133 | None:intergenic |
| TCAATGTCGAATTCGCTTAG+AGG | 0.394928 | 3_1:-80745291 | Msa0379570:CDS |
| GCACTTAGGTGACTTAGAAT+TGG | 0.409362 | 3_1:+80742908 | None:intergenic |
| ATTCAATTCAATTCAATTCA+AGG | 0.411010 | 3_1:-80745327 | Msa0379570:five_prime_UTR |
| AAAGGACCACGTGAACAATA+TGG | 0.426700 | 3_1:+80743337 | None:intergenic |
| ACATATGTTAAAATTTCATC+TGG | 0.437854 | 3_1:-80743081 | Msa0379570:three_prime_UTR |
| TTCAATTCAATTCAATTCAA+GGG | 0.440026 | 3_1:-80745326 | Msa0379570:five_prime_UTR |
| TTTGTTACCTTGATCGGAAA+GGG | 0.442979 | 3_1:+80745244 | None:intergenic |
| CTGCAGGTTGCTGAAGAGAT+AGG | 0.445511 | 3_1:-80744430 | Msa0379570:intron |
| CAACTTGGGTGACATAGAAT+TGG | 0.446522 | 3_1:-80743014 | Msa0379570:three_prime_UTR |
| TTCGAAATCGATAAAGCTGT+TGG | 0.459721 | 3_1:-80745410 | Msa0379570:five_prime_UTR |
| AGGATTCGGGGATAGCAACT+TGG | 0.462209 | 3_1:-80743029 | Msa0379570:three_prime_UTR |
| ACAGTGGCAAAGGCTCAAGC+TGG | 0.467813 | 3_1:-80743414 | Msa0379570:CDS |
| AGGGTGTTTGTTACCTTGAT+CGG | 0.467925 | 3_1:+80745238 | None:intergenic |
| GATGAAATTACCGGTCTTCG+TGG | 0.475096 | 3_1:-80745068 | Msa0379570:CDS |
| GATTTCGATGATGAAATTAC+CGG | 0.478157 | 3_1:-80745077 | Msa0379570:CDS |
| ATAATCTAAGAAGATTGAAC+AGG | 0.480667 | 3_1:-80743383 | Msa0379570:CDS |
| AACAGGAGTATCGTGCGAAA+TGG | 0.487568 | 3_1:-80743366 | Msa0379570:CDS |
| TCGAACTTGACCACGAAGAC+CGG | 0.491165 | 3_1:+80745058 | None:intergenic |
| TCATCATCGAAATCACCAAC+AGG | 0.498984 | 3_1:+80745086 | None:intergenic |
| ATGCTGCCCCTTTCCGATCA+AGG | 0.499268 | 3_1:-80745251 | Msa0379570:intron |
| AATACGCAATTGAATTTCAT+CGG | 0.502875 | 3_1:+80745112 | None:intergenic |
| ATTTCATCGGAGGACGCAGC+AGG | 0.517383 | 3_1:+80745125 | None:intergenic |
| TGAAACATATTAATGCGAAA+AGG | 0.525274 | 3_1:+80743319 | None:intergenic |
| GTTTGTTACCTTGATCGGAA+AGG | 0.528652 | 3_1:+80745243 | None:intergenic |
| CAGTGGCAAAGGCTCAAGCT+GGG | 0.533913 | 3_1:-80743413 | Msa0379570:CDS |
| GAGTCATTCAAAGAAAGACT+TGG | 0.553592 | 3_1:+80743217 | None:intergenic |
| TCAATTCAATTCAATTCAAG+GGG | 0.557248 | 3_1:-80745325 | Msa0379570:five_prime_UTR |
| AGTCATTCAAAGAAAGACTT+GGG | 0.564749 | 3_1:+80743218 | None:intergenic |
| TGACTTAGAATTGGTGACAT+TGG | 0.566268 | 3_1:+80742917 | None:intergenic |
| GCAGCAAATGACAGTGGCAA+AGG | 0.571535 | 3_1:-80743424 | Msa0379570:intron |
| ATGTCGAATTCGCTTAGAGG+TGG | 0.594115 | 3_1:-80745288 | Msa0379570:CDS |
| CGCTAGAACGAACAAATAAG+GGG | 0.596737 | 3_1:+80745371 | None:intergenic |
| GGATTCGGGGATAGCAACTT+GGG | 0.605622 | 3_1:-80743028 | Msa0379570:three_prime_UTR |
| GTCAACCACAATGTCACAAG+TGG | 0.617868 | 3_1:+80742939 | None:intergenic |
| AAAAGCCACTTGTGACATTG+TGG | 0.637009 | 3_1:-80742944 | Msa0379570:three_prime_UTR |
| TGACATAGAATTGGTGACAT+TGG | 0.644138 | 3_1:-80743005 | Msa0379570:three_prime_UTR |
| CAATTGCGTATTGATCCTGT+TGG | 0.644327 | 3_1:-80745101 | Msa0379570:CDS |
| TCGAAGATGTCCAGAAAGTG+AGG | 0.651544 | 3_1:-80743279 | Msa0379570:exon |
| AGTGGCAAAGGCTCAAGCTG+GGG | 0.653066 | 3_1:-80743412 | Msa0379570:CDS |
| TTCAAACCATATTGTTCACG+TGG | 0.657520 | 3_1:-80743343 | Msa0379570:CDS |
| TTGTTACCTTGATCGGAAAG+GGG | 0.660352 | 3_1:+80745245 | None:intergenic |
| ACGCAATTGAATTTCATCGG+AGG | 0.692132 | 3_1:+80745115 | None:intergenic |
| TTTAATGCAGCAAATGACAG+TGG | 0.697287 | 3_1:-80743430 | Msa0379570:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATTATCATGATTTTT+AGG | - | chr3_1:80743319-80743338 | Msa0379570:CDS | 10.0% |
| !! | GAAAAAAAAAAAAAAAAAAG+AGG | - | chr3_1:80743390-80743409 | Msa0379570:CDS | 10.0% |
| !! | AATAAAACTTGAAATTATAA+TGG | - | chr3_1:80744177-80744196 | Msa0379570:intron | 10.0% |
| !! | ATAAAACTTGAAATTATAAT+GGG | - | chr3_1:80744178-80744197 | Msa0379570:intron | 10.0% |
| !!! | AAAATATTTCTTTTGTAAAA+TGG | + | chr3_1:80744268-80744287 | None:intergenic | 10.0% |
| !!! | TTGAATTGAATTGAATTTTA+GGG | + | chr3_1:80742958-80742977 | None:intergenic | 15.0% |
| !!! | ATTGAATTGAATTGAATTTT+AGG | + | chr3_1:80742959-80742978 | None:intergenic | 15.0% |
| !!! | GATTTTCTGTTATTTAATTT+GGG | + | chr3_1:80743556-80743575 | None:intergenic | 15.0% |
| !!! | AACAAACATTTTTTTAATAC+TGG | + | chr3_1:80743578-80743597 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTATAAGTCAA+AGG | + | chr3_1:80744239-80744258 | None:intergenic | 15.0% |
| !! | ATTCAATTCAATTCAATTCA+AGG | - | chr3_1:80742962-80742981 | Msa0379570:three_prime_UTR | 20.0% |
| !! | TTCAATTCAATTCAATTCAA+GGG | - | chr3_1:80742963-80742982 | Msa0379570:three_prime_UTR | 20.0% |
| !!! | ACTTTTTTCATTAGTTTGAT+TGG | - | chr3_1:80743479-80743498 | Msa0379570:intron | 20.0% |
| !!! | GGATTTTCTGTTATTTAATT+TGG | + | chr3_1:80743557-80743576 | None:intergenic | 20.0% |
| !! | AAAAATCTTTGAACCTAATA+TGG | + | chr3_1:80743784-80743803 | None:intergenic | 20.0% |
| !! | TTATCCAATAAATGATGTAT+CGG | + | chr3_1:80743950-80743969 | None:intergenic | 20.0% |
| !!! | TTACTTTAGGATTATTATCT+TGG | - | chr3_1:80744592-80744611 | Msa0379570:intron | 20.0% |
| !! | TGGATTATAACATTAATCTA+TGG | - | chr3_1:80744612-80744631 | Msa0379570:intron | 20.0% |
| !!! | AAAACAAAGTATTAAGAAGA+CGG | + | chr3_1:80744832-80744851 | None:intergenic | 20.0% |
| !! | TGTGATGAAAAAAGATAATA+TGG | - | chr3_1:80745162-80745181 | Msa0379570:intron | 20.0% |
| !! | ACATATGTTAAAATTTCATC+TGG | - | chr3_1:80745208-80745227 | Msa0379570:intron | 20.0% |
| ! | TCAATTCAATTCAATTCAAG+GGG | - | chr3_1:80742964-80742983 | Msa0379570:three_prime_UTR | 25.0% |
| ! | AATACGCAATTGAATTTCAT+CGG | + | chr3_1:80743180-80743199 | None:intergenic | 25.0% |
| ! | TTTATAGTGTGTGCATAAAT+GGG | + | chr3_1:80743286-80743305 | None:intergenic | 25.0% |
| !! | TTTTATAGTGTGTGCATAAA+TGG | + | chr3_1:80743287-80743306 | None:intergenic | 25.0% |
| ! | ATTCATAAACAAGCAAATAC+AGG | + | chr3_1:80743448-80743467 | None:intergenic | 25.0% |
| !!! | TTTTTCATTAGTTTGATTGG+TGG | - | chr3_1:80743482-80743501 | Msa0379570:intron | 25.0% |
| ! | TAGTTTGATGAAACCATATT+AGG | - | chr3_1:80743768-80743787 | Msa0379570:intron | 25.0% |
| ! | TCTCAATCAGTAACTTAATT+AGG | - | chr3_1:80744129-80744148 | Msa0379570:intron | 25.0% |
| ! | CTCAATCAGTAACTTAATTA+GGG | - | chr3_1:80744130-80744149 | Msa0379570:intron | 25.0% |
| ! | TAATAGTTTATGATCTCTAG+TGG | - | chr3_1:80744300-80744319 | Msa0379570:intron | 25.0% |
| ! | GAAGTGAAGTAATTTATGTT+TGG | + | chr3_1:80744471-80744490 | None:intergenic | 25.0% |
| ! | ATAATAATCCTAAAGTAACG+AGG | + | chr3_1:80744590-80744609 | None:intergenic | 25.0% |
| !! | AAACAAAGTATTAAGAAGAC+GGG | + | chr3_1:80744831-80744850 | None:intergenic | 25.0% |
| ! | ATAATCTAAGAAGATTGAAC+AGG | - | chr3_1:80744906-80744925 | Msa0379570:intron | 25.0% |
| ! | TGAAACATATTAATGCGAAA+AGG | + | chr3_1:80744973-80744992 | None:intergenic | 25.0% |
| !!! | AGTGGGATTTTAATTTTCAT+TGG | + | chr3_1:80745449-80745468 | None:intergenic | 25.0% |
| AAATTCATTCAAATGCAGTG+AGG | - | chr3_1:80743124-80743143 | Msa0379570:three_prime_UTR | 30.0% | |
| AATTCATTCAAATGCAGTGA+GGG | - | chr3_1:80743125-80743144 | Msa0379570:three_prime_UTR | 30.0% | |
| GATTTCGATGATGAAATTAC+CGG | - | chr3_1:80743212-80743231 | Msa0379570:three_prime_UTR | 30.0% | |
| TTATAGTGTGTGCATAAATG+GGG | + | chr3_1:80743285-80743304 | None:intergenic | 30.0% | |
| TACTAAGACTCTATTACACT+CGG | + | chr3_1:80743696-80743715 | None:intergenic | 30.0% | |
| AGAGAATCAAAAACGAAAAC+GGG | + | chr3_1:80743816-80743835 | None:intergenic | 30.0% | |
| CAGAGAATCAAAAACGAAAA+CGG | + | chr3_1:80743817-80743836 | None:intergenic | 30.0% | |
| ! | CAAGACTCAAAAAGATTTTC+TGG | - | chr3_1:80743891-80743910 | Msa0379570:intron | 30.0% |
| CTGTATTCTACTCATACATT+GGG | - | chr3_1:80743971-80743990 | Msa0379570:intron | 30.0% | |
| ! | GAAAAGAGTACATGCATATA+TGG | - | chr3_1:80744004-80744023 | Msa0379570:intron | 30.0% |
| GTTACATGCTTTATGATATC+AGG | - | chr3_1:80744026-80744045 | Msa0379570:intron | 30.0% | |
| GCTTTATGATATCAGGAAAA+TGG | - | chr3_1:80744033-80744052 | Msa0379570:intron | 30.0% | |
| ! | GTCACTTTCTTATGATGTTT+AGG | - | chr3_1:80744152-80744171 | Msa0379570:intron | 30.0% |
| !! | TGGATTCAAGTTTTACATAG+AGG | + | chr3_1:80744327-80744346 | None:intergenic | 30.0% |
| ! | ATTGGTTCTTCCTTAACTTT+AGG | - | chr3_1:80744367-80744386 | Msa0379570:intron | 30.0% |
| ! | AATACAGAGGAAACATGTTT+TGG | - | chr3_1:80744722-80744741 | Msa0379570:intron | 30.0% |
| GTTTCACTATTGTGTATCTT+TGG | - | chr3_1:80744987-80745006 | Msa0379570:intron | 30.0% | |
| AGTCATTCAAAGAAAGACTT+GGG | + | chr3_1:80745074-80745093 | None:intergenic | 30.0% | |
| ! | CTTTTCTATACAACAAACTC+AGG | + | chr3_1:80745107-80745126 | None:intergenic | 30.0% |
| ! | TGTAATTTTCTCTGTGTAAC+AGG | - | chr3_1:80745130-80745149 | Msa0379570:CDS | 30.0% |
| CATCATTCATAAAAAAGAGC+AGG | - | chr3_1:80745240-80745259 | Msa0379570:intron | 30.0% | |
| TCATAAAAAAGAGCAGGATT+CGG | - | chr3_1:80745246-80745265 | Msa0379570:intron | 30.0% | |
| !!! | TTTTTTCTCTCTCTTTCACA+AGG | + | chr3_1:80745329-80745348 | None:intergenic | 30.0% |
| TCACCTAAGTGCTAAAAAAA+AGG | - | chr3_1:80745392-80745411 | Msa0379570:five_prime_UTR | 30.0% | |
| CACCTAAGTGCTAAAAAAAA+GGG | - | chr3_1:80745393-80745412 | Msa0379570:five_prime_UTR | 30.0% | |
| ACCTAAGTGCTAAAAAAAAG+GGG | - | chr3_1:80745394-80745413 | Msa0379570:five_prime_UTR | 30.0% | |
| ! | GATTTCGAACTGTTTCTCTT+TGG | + | chr3_1:80742868-80742887 | None:intergenic | 35.0% |
| TTCGAAATCGATAAAGCTGT+TGG | - | chr3_1:80742879-80742898 | Msa0379570:three_prime_UTR | 35.0% | |
| TCGCTAGAACGAACAAATAA+GGG | + | chr3_1:80742922-80742941 | None:intergenic | 35.0% | |
| TTCGCTAGAACGAACAAATA+AGG | + | chr3_1:80742923-80742942 | None:intergenic | 35.0% | |
| TTTGTTACCTTGATCGGAAA+GGG | + | chr3_1:80743048-80743067 | None:intergenic | 35.0% | |
| AAGAAATTGAGAGAGAGGAA+GGG | + | chr3_1:80743073-80743092 | None:intergenic | 35.0% | |
| AATCGAAGAAATTGAGAGAG+AGG | + | chr3_1:80743078-80743097 | None:intergenic | 35.0% | |
| !! | TTGATTGGTGGATCGTTTTT+AGG | - | chr3_1:80743494-80743513 | Msa0379570:intron | 35.0% |
| AATCAAAAACGAAAACGGGA+AGG | + | chr3_1:80743812-80743831 | None:intergenic | 35.0% | |
| !!! | AAAAGATTTTCTGGAACAGC+TGG | - | chr3_1:80743900-80743919 | Msa0379570:intron | 35.0% |
| TCAGCCGATACATCATTTAT+TGG | - | chr3_1:80743943-80743962 | Msa0379570:intron | 35.0% | |
| CCAATGTATGAGTAGAATAC+AGG | + | chr3_1:80743973-80743992 | None:intergenic | 35.0% | |
| CCTGTATTCTACTCATACAT+TGG | - | chr3_1:80743970-80743989 | Msa0379570:intron | 35.0% | |
| ! | TATGCATGTACTCTTTTCTC+AGG | + | chr3_1:80744002-80744021 | None:intergenic | 35.0% |
| !! | TGAAGTTCTGAACCATCTAT+TGG | - | chr3_1:80744349-80744368 | Msa0379570:intron | 35.0% |
| GTTAAGGAAGAACCAATAGA+TGG | + | chr3_1:80744364-80744383 | None:intergenic | 35.0% | |
| ! | GTTCTTCCTTAACTTTAGGA+TGG | - | chr3_1:80744371-80744390 | Msa0379570:intron | 35.0% |
| !! | TCCTTAACTTTAGGATGGTT+AGG | - | chr3_1:80744376-80744395 | Msa0379570:intron | 35.0% |
| ACCTAACCATCCTAAAGTTA+AGG | + | chr3_1:80744380-80744399 | None:intergenic | 35.0% | |
| ! | TAGAAGGCCAAAACTTCTTT+TGG | + | chr3_1:80744558-80744577 | None:intergenic | 35.0% |
| GCTTCAGAAAATGAATACAG+AGG | - | chr3_1:80744709-80744728 | Msa0379570:intron | 35.0% | |
| TGTTGTCATTGATCTGTCAT+TGG | - | chr3_1:80744768-80744787 | Msa0379570:intron | 35.0% | |
| TTTAATGCAGCAAATGACAG+TGG | - | chr3_1:80744859-80744878 | Msa0379570:intron | 35.0% | |
| TTCAAACCATATTGTTCACG+TGG | - | chr3_1:80744946-80744965 | Msa0379570:intron | 35.0% | |
| GAGTCATTCAAAGAAAGACT+TGG | + | chr3_1:80745075-80745094 | None:intergenic | 35.0% | |
| ! | AATTTTCTCTGTGTAACAGG+TGG | - | chr3_1:80745133-80745152 | Msa0379570:CDS | 35.0% |
| ! | ATTTTCTCTGTGTAACAGGT+GGG | - | chr3_1:80745134-80745153 | Msa0379570:CDS | 35.0% |
| CATAAAAAAGAGCAGGATTC+GGG | - | chr3_1:80745247-80745266 | Msa0379570:intron | 35.0% | |
| ATAAAAAAGAGCAGGATTCG+GGG | - | chr3_1:80745248-80745267 | Msa0379570:intron | 35.0% | |
| ! | TGACATAGAATTGGTGACAT+TGG | - | chr3_1:80745284-80745303 | Msa0379570:CDS | 35.0% |
| ! | TGACTTAGAATTGGTGACAT+TGG | + | chr3_1:80745375-80745394 | None:intergenic | 35.0% |
| CCTAAGTGCTAAAAAAAAGG+GGG | - | chr3_1:80745395-80745414 | Msa0379570:five_prime_UTR | 35.0% | |
| ! | TCTTTTTCCAACAAGGCAAC+AGG | + | chr3_1:80742836-80742855 | None:intergenic | 40.0% |
| ! | TCGTCTCTCTTTTTCCAACA+AGG | + | chr3_1:80742843-80742862 | None:intergenic | 40.0% |
| CGCTAGAACGAACAAATAAG+GGG | + | chr3_1:80742921-80742940 | None:intergenic | 40.0% | |
| TCAATGTCGAATTCGCTTAG+AGG | - | chr3_1:80742998-80743017 | Msa0379570:three_prime_UTR | 40.0% | |
| ! | CTTAGAGGTGGATCCTTTTA+CGG | - | chr3_1:80743013-80743032 | Msa0379570:three_prime_UTR | 40.0% |
| TTGTTACCTTGATCGGAAAG+GGG | + | chr3_1:80743047-80743066 | None:intergenic | 40.0% | |
| ! | GTTTGTTACCTTGATCGGAA+AGG | + | chr3_1:80743049-80743068 | None:intergenic | 40.0% |
| ! | AGGGTGTTTGTTACCTTGAT+CGG | + | chr3_1:80743054-80743073 | None:intergenic | 40.0% |
| GAAGAAATTGAGAGAGAGGA+AGG | + | chr3_1:80743074-80743093 | None:intergenic | 40.0% | |
| ACGCAATTGAATTTCATCGG+AGG | + | chr3_1:80743177-80743196 | None:intergenic | 40.0% | |
| ! | CAATTGCGTATTGATCCTGT+TGG | - | chr3_1:80743188-80743207 | Msa0379570:three_prime_UTR | 40.0% |
| TCATCATCGAAATCACCAAC+AGG | + | chr3_1:80743206-80743225 | None:intergenic | 40.0% | |
| TGAGATATGTGTGTTGCAGA+AGG | - | chr3_1:80743343-80743362 | Msa0379570:CDS | 40.0% | |
| TTTCATAACTGATGCTGCCA+CGG | - | chr3_1:80743657-80743676 | Msa0379570:intron | 40.0% | |
| AAGACTCTATTACACTCGGT+TGG | + | chr3_1:80743692-80743711 | None:intergenic | 40.0% | |
| !! | GAACTCTGAAACACTAACCA+TGG | - | chr3_1:80744095-80744114 | Msa0379570:intron | 40.0% |
| TTGAGAAACATATCCTGCCA+TGG | + | chr3_1:80744115-80744134 | None:intergenic | 40.0% | |
| AGATGGTTCAGAACTTCATC+TGG | + | chr3_1:80744347-80744366 | None:intergenic | 40.0% | |
| ! | CACTCGTCCAAAAGAAGTTT+TGG | - | chr3_1:80744548-80744567 | Msa0379570:intron | 40.0% |
| AAAGGACCACGTGAACAATA+TGG | + | chr3_1:80744955-80744974 | None:intergenic | 40.0% | |
| CAACTTGGGTGACATAGAAT+TGG | - | chr3_1:80745275-80745294 | Msa0379570:CDS | 40.0% | |
| AAAAGCCACTTGTGACATTG+TGG | - | chr3_1:80745345-80745364 | Msa0379570:five_prime_UTR | 40.0% | |
| GCACTTAGGTGACTTAGAAT+TGG | + | chr3_1:80745384-80745403 | None:intergenic | 40.0% | |
| !!! | CCCCCTTTTTTTTAGCACTT+AGG | + | chr3_1:80745398-80745417 | None:intergenic | 40.0% |
| AAGTGCTAAAAAAAAGGGGG+AGG | - | chr3_1:80745398-80745417 | Msa0379570:five_prime_UTR | 40.0% | |
| AGTGCTAAAAAAAAGGGGGA+GGG | - | chr3_1:80745399-80745418 | Msa0379570:five_prime_UTR | 40.0% | |
| ATGTCGAATTCGCTTAGAGG+TGG | - | chr3_1:80743001-80743020 | Msa0379570:three_prime_UTR | 45.0% | |
| GATGAAATTACCGGTCTTCG+TGG | - | chr3_1:80743221-80743240 | Msa0379570:three_prime_UTR | 45.0% | |
| TAGTGTGTGCATAAATGGGG+AGG | + | chr3_1:80743282-80743301 | None:intergenic | 45.0% | |
| ACTTTGTGCATATCTGCTGC+AGG | - | chr3_1:80743843-80743862 | Msa0379570:intron | 45.0% | |
| ! | TCTGAAACACTAACCATGGC+AGG | - | chr3_1:80744099-80744118 | Msa0379570:intron | 45.0% |
| !! | AGTTTTGGCCTTCTAGCAGT+TGG | - | chr3_1:80744563-80744582 | Msa0379570:intron | 45.0% |
| ! | CAGTTGGTCCTCGTTACTTT+AGG | - | chr3_1:80744579-80744598 | Msa0379570:intron | 45.0% |
| !!! | CAGAGGAAACATGTTTTGGC+TGG | - | chr3_1:80744726-80744745 | Msa0379570:intron | 45.0% |
| !! | AACAGGAGTATCGTGCGAAA+TGG | - | chr3_1:80744923-80744942 | Msa0379570:intron | 45.0% |
| TCGAAGATGTCCAGAAAGTG+AGG | - | chr3_1:80745010-80745029 | Msa0379570:intron | 45.0% | |
| !! | TGCTGAGAGAAGTATCTTCC+TGG | + | chr3_1:80745040-80745059 | None:intergenic | 45.0% |
| GTCAACCACAATGTCACAAG+TGG | + | chr3_1:80745353-80745372 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAAAAAAGA+GGG | - | chr3_1:80743391-80743410 | Msa0379570:CDS | 5.0% |
| !! | TAATATAAATATATAAACAA+TGG | + | chr3_1:80744678-80744697 | None:intergenic | 5.0% |
| TCGAACTTGACCACGAAGAC+CGG | + | chr3_1:80743234-80743253 | None:intergenic | 50.0% | |
| CTGCAGGTTGCTGAAGAGAT+AGG | - | chr3_1:80743859-80743878 | Msa0379570:intron | 50.0% | |
| AACGAGGACCAACTGCTAGA+AGG | + | chr3_1:80744574-80744593 | None:intergenic | 50.0% | |
| GCAGCAAATGACAGTGGCAA+AGG | - | chr3_1:80744865-80744884 | Msa0379570:intron | 50.0% | |
| TCCAGAAAGTGAGGCTTTCC+AGG | - | chr3_1:80745019-80745038 | Msa0379570:intron | 50.0% | |
| TCCTGGAAAGCCTCACTTTC+TGG | + | chr3_1:80745023-80745042 | None:intergenic | 50.0% | |
| AGGATTCGGGGATAGCAACT+TGG | - | chr3_1:80745260-80745279 | Msa0379570:CDS | 50.0% | |
| GGATTCGGGGATAGCAACTT+GGG | - | chr3_1:80745261-80745280 | Msa0379570:CDS | 50.0% | |
| ATGCTGCCCCTTTCCGATCA+AGG | - | chr3_1:80743038-80743057 | Msa0379570:three_prime_UTR | 55.0% | |
| ATTTCATCGGAGGACGCAGC+AGG | + | chr3_1:80743167-80743186 | None:intergenic | 55.0% | |
| ACAGTGGCAAAGGCTCAAGC+TGG | - | chr3_1:80744875-80744894 | Msa0379570:intron | 55.0% | |
| CAGTGGCAAAGGCTCAAGCT+GGG | - | chr3_1:80744876-80744895 | Msa0379570:intron | 55.0% | |
| AGTGGCAAAGGCTCAAGCTG+GGG | - | chr3_1:80744877-80744896 | Msa0379570:intron | 55.0% | |
| AGGGGCAGCATCGCCGTAAA+AGG | + | chr3_1:80743029-80743048 | None:intergenic | 60.0% | |
| TCGGTTGGAAGCAGCATCCG+TGG | + | chr3_1:80743677-80743696 | None:intergenic | 60.0% | |
| GGAGGACGCAGCAGGAGTTC+TGG | + | chr3_1:80743159-80743178 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 80742830 | 80745481 | 80742830 | ID=Msa0379570;Name=Msa0379570 |
| chr3_1 | mRNA | 80742830 | 80745481 | 80742830 | ID=Msa0379570-mRNA-1;Parent=Msa0379570;Name=Msa0379570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=171|1|1|1|1|1|4|451|133 |
| chr3_1 | exon | 80742830 | 80743442 | 80742830 | ID=Msa0379570-mRNA-1:exon:20221;Parent=Msa0379570-mRNA-1 |
| chr3_1 | exon | 80744390 | 80744446 | 80744390 | ID=Msa0379570-mRNA-1:exon:20220;Parent=Msa0379570-mRNA-1 |
| chr3_1 | exon | 80745046 | 80745169 | 80745046 | ID=Msa0379570-mRNA-1:exon:20219;Parent=Msa0379570-mRNA-1 |
| chr3_1 | exon | 80745252 | 80745481 | 80745252 | ID=Msa0379570-mRNA-1:exon:20218;Parent=Msa0379570-mRNA-1 |
| chr3_1 | five_prime_UTR | 80745311 | 80745481 | 80745311 | ID=Msa0379570-mRNA-1:five_prime_utr;Parent=Msa0379570-mRNA-1 |
| chr3_1 | CDS | 80745252 | 80745310 | 80745252 | ID=Msa0379570-mRNA-1:cds;Parent=Msa0379570-mRNA-1 |
| chr3_1 | CDS | 80745046 | 80745169 | 80745046 | ID=Msa0379570-mRNA-1:cds;Parent=Msa0379570-mRNA-1 |
| chr3_1 | CDS | 80744390 | 80744446 | 80744390 | ID=Msa0379570-mRNA-1:cds;Parent=Msa0379570-mRNA-1 |
| chr3_1 | CDS | 80743281 | 80743442 | 80743281 | ID=Msa0379570-mRNA-1:cds;Parent=Msa0379570-mRNA-1 |
| chr3_1 | three_prime_UTR | 80742830 | 80743280 | 80742830 | ID=Msa0379570-mRNA-1:three_prime_utr;Parent=Msa0379570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
