Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304520 | PNY09511.1 | 91.429 | 175 | 14 | 1 | 3 | 177 | 1 | 174 | 1.80e-113 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304520 | sp|Q9SSR1|Y1259_ARATH | 70.690 | 174 | 48 | 3 | 5 | 177 | 1 | 172 | 2.55e-84 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0304520 | 0.815250 | 1.017723e-51 | -8.615850e-47 |
| Msa0009560 | Msa0304520 | 0.803660 | 3.135224e-49 | -8.615850e-47 |
| Msa0020320 | Msa0304520 | 0.805821 | 1.109152e-49 | -8.615850e-47 |
| Msa0027030 | Msa0304520 | 0.816663 | 4.923562e-52 | -8.615850e-47 |
| Msa0034050 | Msa0304520 | 0.815233 | 1.026949e-51 | -8.615850e-47 |
| Msa0040860 | Msa0304520 | 0.806010 | 1.012514e-49 | -8.615850e-47 |
| Msa0041780 | Msa0304520 | 0.801836 | 7.461803e-49 | -8.615850e-47 |
| Msa0044780 | Msa0304520 | 0.832856 | 7.443904e-56 | -8.615850e-47 |
| Msa0081290 | Msa0304520 | 0.832355 | 9.911471e-56 | -8.615850e-47 |
| Msa0081840 | Msa0304520 | 0.811471 | 6.887591e-51 | -8.615850e-47 |
| Msa0090350 | Msa0304520 | 0.803124 | 4.048519e-49 | -8.615850e-47 |
| Msa0091090 | Msa0304520 | 0.836554 | 8.742616e-57 | -8.615850e-47 |
| Msa0094900 | Msa0304520 | 0.807287 | 5.442314e-50 | -8.615850e-47 |
| Msa0116200 | Msa0304520 | 0.802541 | 5.342243e-49 | -8.615850e-47 |
| Msa0117300 | Msa0304520 | 0.813870 | 2.056566e-51 | -8.615850e-47 |
| Msa0120320 | Msa0304520 | 0.847161 | 1.377528e-59 | -8.615850e-47 |
| Msa0128070 | Msa0304520 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0128110 | Msa0304520 | 0.800091 | 1.695336e-48 | -8.615850e-47 |
| Msa0131090 | Msa0304520 | 0.828841 | 7.182627e-55 | -8.615850e-47 |
| Msa0137010 | Msa0304520 | 0.802646 | 5.083523e-49 | -8.615850e-47 |
| Msa0143280 | Msa0304520 | 0.816531 | 5.270747e-52 | -8.615850e-47 |
| Msa0147540 | Msa0304520 | 0.823134 | 1.631521e-53 | -8.615850e-47 |
| Msa0160650 | Msa0304520 | 0.835222 | 1.902524e-56 | -8.615850e-47 |
| Msa0163530 | Msa0304520 | 0.836796 | 7.586789e-57 | -8.615850e-47 |
| Msa0183200 | Msa0304520 | 0.827957 | 1.174094e-54 | -8.615850e-47 |
| Msa0184030 | Msa0304520 | 0.800069 | 1.713423e-48 | -8.615850e-47 |
| Msa0194750 | Msa0304520 | 0.806108 | 9.654520e-50 | -8.615850e-47 |
| Msa0208040 | Msa0304520 | 0.800395 | 1.470412e-48 | -8.615850e-47 |
| Msa0225070 | Msa0304520 | 0.806944 | 6.431155e-50 | -8.615850e-47 |
| Msa0226450 | Msa0304520 | 0.886296 | 3.868816e-72 | -8.615850e-47 |
| Msa0236690 | Msa0304520 | 0.806749 | 7.072184e-50 | -8.615850e-47 |
| Msa0239610 | Msa0304520 | 0.803776 | 2.965986e-49 | -8.615850e-47 |
| Msa0266140 | Msa0304520 | 0.819417 | 1.174552e-52 | -8.615850e-47 |
| Msa0267450 | Msa0304520 | 0.811457 | 6.935484e-51 | -8.615850e-47 |
| Msa0267510 | Msa0304520 | 0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa0295680 | Msa0304520 | -0.808243 | 3.407691e-50 | -8.615850e-47 |
| Msa0304060 | Msa0304520 | 0.824517 | 7.731868e-54 | -8.615850e-47 |
| Msa0304520 | Msa0340870 | 0.801248 | 9.849320e-49 | -8.615850e-47 |
| Msa0304520 | Msa0349220 | 0.801029 | 1.091584e-48 | -8.615850e-47 |
| Msa0304520 | Msa0372990 | 0.816214 | 6.204733e-52 | -8.615850e-47 |
| Msa0304520 | Msa0375570 | 0.804909 | 1.722790e-49 | -8.615850e-47 |
| Msa0304520 | Msa0376480 | 0.831826 | 1.339377e-55 | -8.615850e-47 |
| Msa0304520 | Msa0378670 | 0.826000 | 3.449070e-54 | -8.615850e-47 |
| Msa0304520 | Msa0378700 | 0.817074 | 3.981931e-52 | -8.615850e-47 |
| Msa0304520 | Msa0419420 | 0.801371 | 9.291619e-49 | -8.615850e-47 |
| Msa0304520 | Msa0428330 | 0.866043 | 3.804231e-65 | -8.615850e-47 |
| Msa0304520 | Msa0431940 | 0.816861 | 4.445214e-52 | -8.615850e-47 |
| Msa0304520 | Msa0436590 | 0.800932 | 1.142586e-48 | -8.615850e-47 |
| Msa0304520 | Msa0467710 | 0.812401 | 4.318358e-51 | -8.615850e-47 |
| Msa0304520 | Msa0471130 | 0.803961 | 2.715070e-49 | -8.615850e-47 |
| Msa0304520 | Msa0477900 | -0.801045 | 1.083654e-48 | -8.615850e-47 |
| Msa0304520 | Msa0495510 | 0.805380 | 1.372845e-49 | -8.615850e-47 |
| Msa0304520 | Msa0501350 | 0.802215 | 6.236349e-49 | -8.615850e-47 |
| Msa0304520 | Msa0520810 | 0.802054 | 6.730923e-49 | -8.615850e-47 |
| Msa0304520 | Msa0555510 | 0.817738 | 2.822535e-52 | -8.615850e-47 |
| Msa0304520 | Msa0556070 | 0.835600 | 1.526612e-56 | -8.615850e-47 |
| Msa0304520 | Msa0565150 | 0.825205 | 5.321865e-54 | -8.615850e-47 |
| Msa0304520 | Msa0568460 | 0.827093 | 1.892443e-54 | -8.615850e-47 |
| Msa0304520 | Msa0579170 | 0.836645 | 8.289719e-57 | -8.615850e-47 |
| Msa0304520 | Msa0579230 | 0.836791 | 7.608354e-57 | -8.615850e-47 |
| Msa0304520 | Msa0587070 | 0.800499 | 1.400261e-48 | -8.615850e-47 |
| Msa0304520 | Msa0608940 | 0.837652 | 4.580351e-57 | -8.615850e-47 |
| Msa0304520 | Msa0625440 | 0.816453 | 5.487279e-52 | -8.615850e-47 |
| Msa0304520 | Msa0649530 | 0.832177 | 1.096702e-55 | -8.615850e-47 |
| Msa0304520 | Msa0659020 | 0.848128 | 7.464057e-60 | -8.615850e-47 |
| Msa0304520 | Msa0688880 | 0.818419 | 1.979610e-52 | -8.615850e-47 |
| Msa0304520 | Msa0691740 | 0.825847 | 3.748834e-54 | -8.615850e-47 |
| Msa0304520 | Msa0693400 | 0.808978 | 2.374132e-50 | -8.615850e-47 |
| Msa0304520 | Msa0702360 | 0.809243 | 2.083608e-50 | -8.615850e-47 |
| Msa0304520 | Msa0702560 | 0.802990 | 4.316578e-49 | -8.615850e-47 |
| Msa0304520 | Msa0712910 | 0.813729 | 2.208936e-51 | -8.615850e-47 |
| Msa0304520 | Msa0733240 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0304520 | Msa0754020 | 0.809860 | 1.535874e-50 | -8.615850e-47 |
| Msa0304520 | Msa0774360 | 0.830233 | 3.296228e-55 | -8.615850e-47 |
| Msa0304520 | Msa0787360 | 0.820428 | 6.897120e-53 | -8.615850e-47 |
| Msa0304520 | Msa0807100 | 0.807575 | 4.726448e-50 | -8.615850e-47 |
| Msa0304520 | Msa0812020 | 0.814437 | 1.541677e-51 | -8.615850e-47 |
| Msa0304520 | Msa0823310 | 0.800810 | 1.210328e-48 | -8.615850e-47 |
| Msa0304520 | Msa0833030 | 0.803210 | 3.886361e-49 | -8.615850e-47 |
| Msa0304520 | Msa0840520 | -0.802474 | 5.516257e-49 | -8.615850e-47 |
| Msa0304520 | Msa0848670 | 0.803540 | 3.320593e-49 | -8.615850e-47 |
| Msa0304520 | Msa0849290 | 0.808719 | 2.696878e-50 | -8.615850e-47 |
| Msa0304520 | Msa0852090 | 0.849346 | 3.429585e-60 | -8.615850e-47 |
| Msa0304520 | Msa0884840 | 0.810434 | 1.155233e-50 | -8.615850e-47 |
| Msa0304520 | Msa0925630 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa0304520 | Msa0950470 | 0.826633 | 2.437527e-54 | -8.615850e-47 |
| Msa0304520 | Msa0950570 | 0.823788 | 1.147037e-53 | -8.615850e-47 |
| Msa0304520 | Msa0967670 | 0.813896 | 2.028992e-51 | -8.615850e-47 |
| Msa0304520 | Msa0967900 | 0.812765 | 3.595869e-51 | -8.615850e-47 |
| Msa0304520 | Msa1031530 | 0.854951 | 8.741079e-62 | -8.615850e-47 |
| Msa0304520 | Msa1052030 | 0.816362 | 5.749723e-52 | -8.615850e-47 |
| Msa0304520 | Msa1070630 | 0.835909 | 1.275161e-56 | -8.615850e-47 |
| Msa0304520 | Msa1078590 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0304520 | Msa1096510 | 0.802578 | 5.248885e-49 | -8.615850e-47 |
| Msa0304520 | Msa1096520 | 0.808771 | 2.629339e-50 | -8.615850e-47 |
| Msa0304520 | Msa1096570 | 0.807909 | 4.014083e-50 | -8.615850e-47 |
| Msa0304520 | Msa1101300 | 0.827460 | 1.545148e-54 | -8.615850e-47 |
| Msa0304520 | Msa1118770 | 0.824660 | 7.157633e-54 | -8.615850e-47 |
| Msa0304520 | Msa1125450 | 0.801146 | 1.033448e-48 | -8.615850e-47 |
| Msa0304520 | Msa1133440 | 0.800604 | 1.333174e-48 | -8.615850e-47 |
| Msa0304520 | Msa1143860 | 0.820083 | 8.274007e-53 | -8.615850e-47 |
| Msa0304520 | Msa1158450 | 0.841983 | 3.411814e-58 | -8.615850e-47 |
| Msa0304520 | Msa1158650 | 0.820677 | 6.044056e-53 | -8.615850e-47 |
| Msa0304520 | Msa1164570 | 0.807934 | 3.965612e-50 | -8.615850e-47 |
| Msa0304520 | Msa1175850 | 0.801271 | 9.739992e-49 | -8.615850e-47 |
| Msa0304520 | Msa1182400 | 0.807950 | 3.933933e-50 | -8.615850e-47 |
| Msa0304520 | Msa1190350 | 0.811986 | 5.321026e-51 | -8.615850e-47 |
| Msa0304520 | Msa1207710 | 0.820564 | 6.415946e-53 | -8.615850e-47 |
| Msa0304520 | Msa1207760 | 0.816645 | 4.969398e-52 | -8.615850e-47 |
| Msa0304520 | Msa1221540 | 0.809768 | 1.607099e-50 | -8.615850e-47 |
| Msa0304520 | Msa1224820 | 0.801131 | 1.040577e-48 | -8.615850e-47 |
| Msa0304520 | Msa1225140 | 0.820232 | 7.646348e-53 | -8.615850e-47 |
| Msa0304520 | Msa1228280 | 0.800182 | 1.624766e-48 | -8.615850e-47 |
| Msa0304520 | Msa1230190 | 0.816952 | 4.241664e-52 | -8.615850e-47 |
| Msa0304520 | Msa1243630 | 0.837371 | 5.406213e-57 | -8.615850e-47 |
| Msa0304520 | Msa1244220 | 0.840392 | 8.941863e-58 | -8.615850e-47 |
| Msa0304520 | Msa1257960 | 0.822056 | 2.905498e-53 | -8.615850e-47 |
| Msa0304520 | Msa1266120 | 0.807545 | 4.797384e-50 | -8.615850e-47 |
| Msa0304520 | Msa1272770 | 0.835759 | 1.391548e-56 | -8.615850e-47 |
| Msa0304520 | Msa1279310 | 0.804386 | 2.214526e-49 | -8.615850e-47 |
| Msa0304520 | Msa1286950 | 0.829930 | 3.906262e-55 | -8.615850e-47 |
| Msa0304520 | Msa1297220 | 0.805649 | 1.205287e-49 | -8.615850e-47 |
| Msa0304520 | Msa1298980 | 0.814886 | 1.225969e-51 | -8.615850e-47 |
| Msa0304520 | Msa1319230 | 0.821639 | 3.628638e-53 | -8.615850e-47 |
| Msa0304520 | Msa1323260 | 0.824582 | 7.467271e-54 | -8.615850e-47 |
| Msa0304520 | Msa1325850 | 0.804515 | 2.082122e-49 | -8.615850e-47 |
| Msa0304520 | Msa1334020 | 0.802754 | 4.829080e-49 | -8.615850e-47 |
| Msa0304520 | Msa1339310 | 0.828391 | 9.225730e-55 | -8.615850e-47 |
| Msa0304520 | Msa1343450 | 0.827953 | 1.176554e-54 | -8.615850e-47 |
| Msa0304520 | Msa1352630 | 0.820535 | 6.516504e-53 | -8.615850e-47 |
| Msa0304520 | Msa1368660 | 0.816439 | 5.526603e-52 | -8.615850e-47 |
| Msa0304520 | Msa1376010 | 0.820621 | 6.225432e-53 | -8.615850e-47 |
| Msa0304520 | Msa1379270 | 0.803613 | 3.206023e-49 | -8.615850e-47 |
| Msa0304520 | Msa1386250 | 0.811269 | 7.617562e-51 | -8.615850e-47 |
| Msa0304520 | Msa1400240 | 0.814851 | 1.248096e-51 | -8.615850e-47 |
| Msa0304520 | Msa1408860 | 0.809158 | 2.172299e-50 | -8.615850e-47 |
| Msa0304520 | Msa1412740 | 0.831262 | 1.844522e-55 | -8.615850e-47 |
| Msa0304520 | Msa1418840 | 0.820028 | 8.517004e-53 | -8.615850e-47 |
| Msa0304520 | Msa1422150 | 0.803028 | 4.238085e-49 | -8.615850e-47 |
| Msa0304520 | Msa1432250 | 0.817114 | 3.899743e-52 | -8.615850e-47 |
| Msa0304520 | Msa1436620 | -0.801346 | 9.402194e-49 | -8.615850e-47 |
| Msa0304520 | Msa1436660 | 0.820101 | 8.192599e-53 | -8.615850e-47 |
| Msa0304520 | Msa1442070 | 0.822755 | 1.998602e-53 | -8.615850e-47 |
| Msa0304520 | Msa1446220 | 0.805391 | 1.365356e-49 | -8.615850e-47 |
| Msa0304520 | Msa1450630 | 0.844598 | 6.845977e-59 | -8.615850e-47 |
| Msa0304520 | Msa1450780 | 0.831194 | 1.916871e-55 | -8.615850e-47 |
| Msa0304520 | Msa1450850 | 0.838873 | 2.220544e-57 | -8.615850e-47 |
| Msa0304520 | Msa1456620 | 0.806707 | 7.216603e-50 | -8.615850e-47 |
| Msa0304520 | Msa1459630 | 0.817404 | 3.355664e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304520 | MtrunA17_Chr2g0332931 | 95.783 | 166 | 7 | 0 | 12 | 177 | 13 | 178 | 4.94e-117 | 328 |
| Msa0304520 | MtrunA17_Chr5g0414241 | 32.075 | 159 | 103 | 4 | 19 | 175 | 41 | 196 | 2.22e-21 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304520 | AT1G52590.1 | 70.690 | 174 | 48 | 3 | 5 | 177 | 1 | 172 | 2.59e-85 | 248 |
| Msa0304520 | AT1G24095.2 | 37.815 | 119 | 69 | 3 | 60 | 175 | 9 | 125 | 1.84e-21 | 85.5 |
| Msa0304520 | AT1G24095.1 | 37.815 | 119 | 69 | 3 | 60 | 175 | 75 | 191 | 4.24e-21 | 86.3 |
Find 37 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTCCTGCTTGTAATAT+TGG | 0.197241 | 2_3:+61851900 | Msa0304520:CDS |
| GATGAAGCTAATGAAGAAAT+TGG | 0.299889 | 2_3:-61854786 | None:intergenic |
| TTGTACTTGTTGAAAATAAT+AGG | 0.312862 | 2_3:+61853789 | Msa0304520:CDS |
| AGCTTCCTGCTTGTAATATT+GGG | 0.322079 | 2_3:+61851901 | Msa0304520:CDS |
| CGACCCATCATGTTATTTGA+TGG | 0.340065 | 2_3:+61852050 | Msa0304520:CDS |
| TTGTTTCATTTCAATTTCAA+TGG | 0.375360 | 2_3:+61851860 | Msa0304520:exon |
| CTCGAAGTGATAACGTGAAC+TGG | 0.384250 | 2_3:+61851991 | Msa0304520:CDS |
| AGAGGCTGTGTTGAAGATAA+TGG | 0.394830 | 2_3:+61854306 | Msa0304520:CDS |
| ATAATATCTTCTGTCTCAAA+TGG | 0.423847 | 2_3:+61854732 | Msa0304520:three_prime_UTR |
| TTTACCATCAAATAACATGA+TGG | 0.459751 | 2_3:-61852054 | None:intergenic |
| CTGAAGAAGAAACGCTAGCT+GGG | 0.464095 | 2_3:-61854350 | None:intergenic |
| TCGATGACTGCAGATTTGTC+AGG | 0.465548 | 2_3:+61854466 | Msa0304520:intron |
| CAGTTCACGTTATCACTTCG+AGG | 0.470003 | 2_3:-61851990 | None:intergenic |
| ACTGAAGAAGAAACGCTAGC+TGG | 0.477344 | 2_3:-61854351 | None:intergenic |
| AAGATGTTACTCAGGAGATC+AGG | 0.488992 | 2_3:+61853740 | Msa0304520:CDS |
| TTTCTTCATTAGCTTCATCA+AGG | 0.494753 | 2_3:+61854790 | Msa0304520:three_prime_UTR |
| ACATGATGGGTCGTTTGTCT+TGG | 0.498630 | 2_3:-61852040 | None:intergenic |
| TTATTCAACTCGAAGATTTG+AGG | 0.498990 | 2_3:-61854616 | None:intergenic |
| GAAGCTCTTCAGAGTGAAGC+TGG | 0.523439 | 2_3:+61853716 | Msa0304520:CDS |
| AAGAAACGCTAGCTGGGGAA+AGG | 0.536026 | 2_3:-61854344 | None:intergenic |
| ACAACACTTGAGATATCATC+AGG | 0.536992 | 2_3:-61853770 | None:intergenic |
| TGACAGAGTAGCGAAGGTTG+TGG | 0.554535 | 2_3:-61851964 | None:intergenic |
| TTACCATCAAATAACATGAT+GGG | 0.558391 | 2_3:-61852053 | None:intergenic |
| AGAAACGCTAGCTGGGGAAA+GGG | 0.564077 | 2_3:-61854343 | None:intergenic |
| CGATGACTGCAGATTTGTCA+GGG | 0.572274 | 2_3:+61854467 | Msa0304520:intron |
| TGTGAAATCTAGCATCATCC+TGG | 0.576417 | 2_3:+61854549 | Msa0304520:exon |
| ACGCGCCCAATATTACAAGC+AGG | 0.579281 | 2_3:-61851906 | None:intergenic |
| GTGTGTAACTTGTGTAATGG+TGG | 0.594795 | 2_3:+61852171 | Msa0304520:CDS |
| AAGCTGGCAAGATGTTACTC+AGG | 0.601546 | 2_3:+61853732 | Msa0304520:CDS |
| AGGTTGTGACAGAGTAGCGA+AGG | 0.608840 | 2_3:-61851970 | None:intergenic |
| GGGGTGTGTAACTTGTGTAA+TGG | 0.614565 | 2_3:+61852168 | Msa0304520:intron |
| AATGAAACAAGAAGCTTGCG+AGG | 0.622348 | 2_3:-61851847 | None:intergenic |
| TAGATCATACATAAAGTCAG+AGG | 0.631939 | 2_3:+61854288 | Msa0304520:intron |
| TCGAAGTGATAACGTGAACT+GGG | 0.641991 | 2_3:+61851992 | Msa0304520:CDS |
| TGTTGCAAATAACCGTTACA+CGG | 0.647186 | 2_3:+61854506 | Msa0304520:CDS |
| TGAAGAAGAAACGCTAGCTG+GGG | 0.657670 | 2_3:-61854349 | None:intergenic |
| TTATCACTAGTATTCATACC+AGG | 0.681280 | 2_3:-61854567 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAATCTAATAAACAT+TGG | - | chr2_3:61852448-61852467 | None:intergenic | 10.0% |
| !!! | GTTATTTTTCAAATTATTAA+CGG | - | chr2_3:61853390-61853409 | None:intergenic | 10.0% |
| !! | ATAAAACAACATTATAAAAA+TGG | - | chr2_3:61854412-61854431 | None:intergenic | 10.0% |
| !! | TTAAAAATTGGATTAATTAG+AGG | + | chr2_3:61852288-61852307 | Msa0304520:intron | 15.0% |
| !!! | TTATTTTCTCAAATTATCAT+CGG | + | chr2_3:61853150-61853169 | Msa0304520:intron | 15.0% |
| !! | AAATTCAACAACAAATTATT+TGG | - | chr2_3:61853625-61853644 | None:intergenic | 15.0% |
| !!! | TGTTTTATTCATATTTTGTT+GGG | + | chr2_3:61853667-61853686 | Msa0304520:intron | 15.0% |
| !! | TTGTTTCATTTCAATTTCAA+TGG | + | chr2_3:61851860-61851879 | Msa0304520:exon | 20.0% |
| !! | ATTGAAAATACAAAGAACAA+GGG | - | chr2_3:61852093-61852112 | None:intergenic | 20.0% |
| !! | TTACGCTTCATATTAAAAAT+TGG | + | chr2_3:61852276-61852295 | Msa0304520:intron | 20.0% |
| !!! | ATTTGATTAGTTTACTTAGT+TGG | + | chr2_3:61852370-61852389 | Msa0304520:intron | 20.0% |
| !!! | TTTGTTTTAGGTTTGTTTTA+TGG | + | chr2_3:61852393-61852412 | Msa0304520:intron | 20.0% |
| !!! | CTGTTTTATTCATATTTTGT+TGG | + | chr2_3:61853666-61853685 | Msa0304520:intron | 20.0% |
| !!! | TTGTACTTGTTGAAAATAAT+AGG | + | chr2_3:61853789-61853808 | Msa0304520:CDS | 20.0% |
| !! | TAATAACCTATGAAAACAAT+CGG | + | chr2_3:61854140-61854159 | Msa0304520:intron | 20.0% |
| !!! | CTTTATTTTATCTTTGGTTA+TGG | + | chr2_3:61854164-61854183 | Msa0304520:intron | 20.0% |
| !!! | AGGAAATGTAAATTTTATCT+TGG | + | chr2_3:61854247-61854266 | Msa0304520:intron | 20.0% |
| ! | TTACCATCAAATAACATGAT+GGG | - | chr2_3:61852056-61852075 | None:intergenic | 25.0% |
| ! | TTTACCATCAAATAACATGA+TGG | - | chr2_3:61852057-61852076 | None:intergenic | 25.0% |
| ! | CATTGAAAATACAAAGAACA+AGG | - | chr2_3:61852094-61852113 | None:intergenic | 25.0% |
| !!! | TTTTGATGATTTTGACATAC+AGG | + | chr2_3:61852147-61852166 | Msa0304520:intron | 25.0% |
| !!! | TTTGATGATTTTGACATACA+GGG | + | chr2_3:61852148-61852167 | Msa0304520:intron | 25.0% |
| ! | TAATATGAAGCGTAATCAAA+AGG | - | chr2_3:61852271-61852290 | None:intergenic | 25.0% |
| !!! | TTACTTAGTTGGTTTGTTTT+AGG | + | chr2_3:61852381-61852400 | Msa0304520:intron | 25.0% |
| ! | AAATCTAATAAACATTGGAC+AGG | - | chr2_3:61852443-61852462 | None:intergenic | 25.0% |
| ! | TTTATTTAAACTCGATATCC+CGG | + | chr2_3:61852528-61852547 | Msa0304520:intron | 25.0% |
| ! | AGATTTGATCTTTAATTACG+TGG | + | chr2_3:61852766-61852785 | Msa0304520:intron | 25.0% |
| ! | TAGATGATTTACACAATTCA+TGG | + | chr2_3:61853250-61853269 | Msa0304520:intron | 25.0% |
| ! | AAATATATGGGTAACTATGT+AGG | + | chr2_3:61853285-61853304 | Msa0304520:intron | 25.0% |
| ! | TGAAAGAAAATCAAGGTTAA+TGG | - | chr2_3:61853563-61853582 | None:intergenic | 25.0% |
| !! | TTATTCATATTTTGTTGGGA+TGG | + | chr2_3:61853671-61853690 | Msa0304520:intron | 25.0% |
| !! | TATTCATATTTTGTTGGGAT+GGG | + | chr2_3:61853672-61853691 | Msa0304520:intron | 25.0% |
| ! | GTTACTAATCTGAAAATTTC+TGG | - | chr2_3:61853864-61853883 | None:intergenic | 25.0% |
| !!! | ATTGAAATTTTAACAGAACG+AGG | - | chr2_3:61853951-61853970 | None:intergenic | 25.0% |
| !!! | ATCGGACTTTATTTTATCTT+TGG | + | chr2_3:61854158-61854177 | Msa0304520:intron | 25.0% |
| !!! | TGTAAATTTTATCTTGGTGT+TGG | + | chr2_3:61854253-61854272 | Msa0304520:intron | 25.0% |
| ! | CCTATAAAATATACTTACAG+AGG | - | chr2_3:61854382-61854401 | None:intergenic | 25.0% |
| !! | CCTCTGTAAGTATATTTTAT+AGG | + | chr2_3:61854379-61854398 | Msa0304520:intron | 25.0% |
| ! | CAACATTATAAAAATGGTGA+AGG | - | chr2_3:61854406-61854425 | None:intergenic | 25.0% |
| ! | TTTATTGCTAAAGAGAAACA+AGG | + | chr2_3:61854427-61854446 | Msa0304520:intron | 25.0% |
| !! | GATATAATCGTTTTACTTGA+TGG | + | chr2_3:61854687-61854706 | Msa0304520:three_prime_UTR | 25.0% |
| ! | ATAATATCTTCTGTCTCAAA+TGG | + | chr2_3:61854732-61854751 | Msa0304520:three_prime_UTR | 25.0% |
| !! | TTGATGATTTTGACATACAG+GGG | + | chr2_3:61852149-61852168 | Msa0304520:intron | 30.0% |
| ! | AAAACCGGTTTATAAAGTCA+GGG | + | chr2_3:61852492-61852511 | Msa0304520:intron | 30.0% |
| CCTCTTAATGTCAATTTGAT+GGG | - | chr2_3:61852642-61852661 | None:intergenic | 30.0% | |
| TCCTCTTAATGTCAATTTGA+TGG | - | chr2_3:61852643-61852662 | None:intergenic | 30.0% | |
| ACATTAAGAGGAATCAAACT+CGG | + | chr2_3:61852651-61852670 | Msa0304520:intron | 30.0% | |
| TCTTTAATTACGTGGAATTG+AGG | + | chr2_3:61852774-61852793 | Msa0304520:intron | 30.0% | |
| !! | CTTGAGAAGAGTTTTTAAAG+AGG | + | chr2_3:61853015-61853034 | Msa0304520:intron | 30.0% |
| ! | AAACTGACTCTTAACTAACT+TGG | + | chr2_3:61853098-61853117 | Msa0304520:intron | 30.0% |
| CCAAGTCAATGCAAATATAT+GGG | + | chr2_3:61853273-61853292 | Msa0304520:intron | 30.0% | |
| GTTAATGGCATTCAAAAACT+TGG | - | chr2_3:61853548-61853567 | None:intergenic | 30.0% | |
| AACGATGTGAAAGAAAATCA+AGG | - | chr2_3:61853570-61853589 | None:intergenic | 30.0% | |
| ! | ATGGATTACTCTCTTATAAC+AGG | + | chr2_3:61853986-61854005 | Msa0304520:intron | 30.0% |
| AATCAGCTGAAAACAACTTA+TGG | - | chr2_3:61854105-61854124 | None:intergenic | 30.0% | |
| ! | TAAAGTCCGATTGTTTTCAT+AGG | - | chr2_3:61854149-61854168 | None:intergenic | 30.0% |
| ATTTCCTCTTTACTCACAAA+AGG | - | chr2_3:61854234-61854253 | None:intergenic | 30.0% | |
| !!! | AAATTTTATCTTGGTGTTGG+TGG | + | chr2_3:61854256-61854275 | Msa0304520:intron | 30.0% |
| TAGATCATACATAAAGTCAG+AGG | + | chr2_3:61854288-61854307 | Msa0304520:intron | 30.0% | |
| TTATCACTAGTATTCATACC+AGG | - | chr2_3:61854570-61854589 | None:intergenic | 30.0% | |
| TTATTCAACTCGAAGATTTG+AGG | - | chr2_3:61854619-61854638 | None:intergenic | 30.0% | |
| ! | TAATCGTTTTACTTGATGGA+AGG | + | chr2_3:61854691-61854710 | Msa0304520:three_prime_UTR | 30.0% |
| GATGAAGCTAATGAAGAAAT+TGG | - | chr2_3:61854789-61854808 | None:intergenic | 30.0% | |
| ! | TTTCTTCATTAGCTTCATCA+AGG | + | chr2_3:61854790-61854809 | Msa0304520:three_prime_UTR | 30.0% |
| AGCTTCCTGCTTGTAATATT+GGG | + | chr2_3:61851901-61851920 | Msa0304520:CDS | 35.0% | |
| !! | TTTTGTAAAGATGAGTTGGG+TGG | - | chr2_3:61852476-61852495 | None:intergenic | 35.0% |
| !! | CGGTTTTGTAAAGATGAGTT+GGG | - | chr2_3:61852479-61852498 | None:intergenic | 35.0% |
| CCAACTCATCTTTACAAAAC+CGG | + | chr2_3:61852477-61852496 | Msa0304520:intron | 35.0% | |
| ! | CAAAACCGGTTTATAAAGTC+AGG | + | chr2_3:61852491-61852510 | Msa0304520:intron | 35.0% |
| ATTGAACCCCTCAGATTAAT+CGG | - | chr2_3:61852561-61852580 | None:intergenic | 35.0% | |
| !! | TCTATGCTCTGGCTTTAAAT+GGG | - | chr2_3:61852604-61852623 | None:intergenic | 35.0% |
| !! | TTCTATGCTCTGGCTTTAAA+TGG | - | chr2_3:61852605-61852624 | None:intergenic | 35.0% |
| GTTCATTATGTTCTATGCTC+TGG | - | chr2_3:61852615-61852634 | None:intergenic | 35.0% | |
| CCCATCAAATTGACATTAAG+AGG | + | chr2_3:61852639-61852658 | Msa0304520:intron | 35.0% | |
| CATTAAGAGGAATCAAACTC+GGG | + | chr2_3:61852652-61852671 | Msa0304520:intron | 35.0% | |
| TGATACCATCTTAGAAATCG+TGG | - | chr2_3:61852860-61852879 | None:intergenic | 35.0% | |
| !! | GAGAAGAGTTTTTAAAGAGG+AGG | + | chr2_3:61853018-61853037 | Msa0304520:intron | 35.0% |
| GTAACTCATCCTTACAAAAC+CGG | - | chr2_3:61853062-61853081 | None:intergenic | 35.0% | |
| ! | CAGTTTTTACCGTTAAGAGT+CGG | - | chr2_3:61853084-61853103 | None:intergenic | 35.0% |
| GCCAAGTCAATGCAAATATA+TGG | + | chr2_3:61853272-61853291 | Msa0304520:intron | 35.0% | |
| !! | CCCATATATTTGCATTGACT+TGG | - | chr2_3:61853276-61853295 | None:intergenic | 35.0% |
| !! | TAGAAGTGTTAGTGCTACAA+AGG | + | chr2_3:61853487-61853506 | Msa0304520:intron | 35.0% |
| GGTTAATTGTGTTCAGAGAA+TGG | - | chr2_3:61853527-61853546 | None:intergenic | 35.0% | |
| GGTTAATGCAATTCAGTTGA+TGG | - | chr2_3:61853604-61853623 | None:intergenic | 35.0% | |
| ACAACACTTGAGATATCATC+AGG | - | chr2_3:61853773-61853792 | None:intergenic | 35.0% | |
| ATTAGTAACCTCTTTCTCCA+GGG | + | chr2_3:61853875-61853894 | Msa0304520:intron | 35.0% | |
| AACAGAACGAGGATTCTAAT+TGG | - | chr2_3:61853940-61853959 | None:intergenic | 35.0% | |
| CAATTATCTTCTCAGCTCAA+TGG | + | chr2_3:61853967-61853986 | Msa0304520:intron | 35.0% | |
| TAAGTACTTGTACGACTGTT+TGG | + | chr2_3:61854049-61854068 | Msa0304520:intron | 35.0% | |
| ! | CTTACCTTTTGTGAGTAAAG+AGG | + | chr2_3:61854227-61854246 | Msa0304520:intron | 35.0% |
| TGTTGCAAATAACCGTTACA+CGG | + | chr2_3:61854506-61854525 | Msa0304520:CDS | 35.0% | |
| ! | AATAACCGTTACACGGTTTT+TGG | + | chr2_3:61854513-61854532 | Msa0304520:CDS | 35.0% |
| AATGAAACAAGAAGCTTGCG+AGG | - | chr2_3:61851850-61851869 | None:intergenic | 40.0% | |
| CAGCTTCCTGCTTGTAATAT+TGG | + | chr2_3:61851900-61851919 | Msa0304520:CDS | 40.0% | |
| ! | TCGAAGTGATAACGTGAACT+GGG | + | chr2_3:61851992-61852011 | Msa0304520:CDS | 40.0% |
| ! | CGACCCATCATGTTATTTGA+TGG | + | chr2_3:61852050-61852069 | Msa0304520:CDS | 40.0% |
| ! | GTGTGTAACTTGTGTAATGG+TGG | + | chr2_3:61852171-61852190 | Msa0304520:CDS | 40.0% |
| AGCAACGAAACTTCTGATGA+TGG | + | chr2_3:61852417-61852436 | Msa0304520:intron | 40.0% | |
| !! | CCGGTTTTGTAAAGATGAGT+TGG | - | chr2_3:61852480-61852499 | None:intergenic | 40.0% |
| GACACCCTGACTTTATAAAC+CGG | - | chr2_3:61852499-61852518 | None:intergenic | 40.0% | |
| CCAAACTCCGATTAATCTGA+GGG | + | chr2_3:61852551-61852570 | Msa0304520:intron | 40.0% | |
| CAAACTCCGATTAATCTGAG+GGG | + | chr2_3:61852552-61852571 | Msa0304520:intron | 40.0% | |
| ATTACGAGACCAACCCAAAT+GGG | + | chr2_3:61852712-61852731 | Msa0304520:intron | 40.0% | |
| CCACCAAACCAGATAATGTT+GGG | - | chr2_3:61852822-61852841 | None:intergenic | 40.0% | |
| !! | CCAACATTATCTGGTTTGGT+GGG | + | chr2_3:61852820-61852839 | Msa0304520:intron | 40.0% |
| CCATCTTAGAAATCGTGGTT+GGG | - | chr2_3:61852855-61852874 | None:intergenic | 40.0% | |
| ACCATCTTAGAAATCGTGGT+TGG | - | chr2_3:61852856-61852875 | None:intergenic | 40.0% | |
| TAGTTCCACATCGGATAGAT+AGG | + | chr2_3:61852989-61853008 | Msa0304520:intron | 40.0% | |
| AGAATCCTATCTATCCGATG+TGG | - | chr2_3:61852997-61853016 | None:intergenic | 40.0% | |
| !! | GATGAGTTACCGACTCTTAA+CGG | + | chr2_3:61853072-61853091 | Msa0304520:intron | 40.0% |
| TGGGTAACTATGTAGGTAGA+TGG | + | chr2_3:61853292-61853311 | Msa0304520:intron | 40.0% | |
| ! | TCTGTGTCAGTGTTTTTCAC+AGG | - | chr2_3:61853344-61853363 | None:intergenic | 40.0% |
| GTAATCCCATGTGTAAGTGT+TGG | + | chr2_3:61853420-61853439 | Msa0304520:intron | 40.0% | |
| AGAGTCCAACACTTACACAT+GGG | - | chr2_3:61853428-61853447 | None:intergenic | 40.0% | |
| TGTTGGACTCTGACATGTAT+CGG | + | chr2_3:61853437-61853456 | Msa0304520:intron | 40.0% | |
| AAGATGTTACTCAGGAGATC+AGG | + | chr2_3:61853740-61853759 | Msa0304520:CDS | 40.0% | |
| GATTAGTAACCTCTTTCTCC+AGG | + | chr2_3:61853874-61853893 | Msa0304520:intron | 40.0% | |
| AGAGGCTGTGTTGAAGATAA+TGG | + | chr2_3:61854306-61854325 | Msa0304520:CDS | 40.0% | |
| TGTGAAATCTAGCATCATCC+TGG | + | chr2_3:61854549-61854568 | Msa0304520:exon | 40.0% | |
| CAGTTCACGTTATCACTTCG+AGG | - | chr2_3:61851993-61852012 | None:intergenic | 45.0% | |
| ! | CTCGAAGTGATAACGTGAAC+TGG | + | chr2_3:61851991-61852010 | Msa0304520:CDS | 45.0% |
| !! | ACATGATGGGTCGTTTGTCT+TGG | - | chr2_3:61852043-61852062 | None:intergenic | 45.0% |
| ! | GGGGTGTGTAACTTGTGTAA+TGG | + | chr2_3:61852168-61852187 | Msa0304520:intron | 45.0% |
| AGATTAATCGGAGTTTGGCC+GGG | - | chr2_3:61852549-61852568 | None:intergenic | 45.0% | |
| CAGATTAATCGGAGTTTGGC+CGG | - | chr2_3:61852550-61852569 | None:intergenic | 45.0% | |
| GCCAAACTCCGATTAATCTG+AGG | + | chr2_3:61852550-61852569 | Msa0304520:intron | 45.0% | |
| CCCTCAGATTAATCGGAGTT+TGG | - | chr2_3:61852554-61852573 | None:intergenic | 45.0% | |
| CTTTAAATGGGTCCCGTAAG+TGG | - | chr2_3:61852592-61852611 | None:intergenic | 45.0% | |
| ATCAAACTCGGGACTTTGAG+AGG | + | chr2_3:61852663-61852682 | Msa0304520:intron | 45.0% | |
| !! | GTAATGTTGGCTTGAGACCT+TGG | - | chr2_3:61852697-61852716 | None:intergenic | 45.0% |
| !! | TTGGGTTGGTCTCGTAATGT+TGG | - | chr2_3:61852710-61852729 | None:intergenic | 45.0% |
| CATTACGAGACCAACCCAAA+TGG | + | chr2_3:61852711-61852730 | Msa0304520:intron | 45.0% | |
| !! | AGACCAACCCAAATGGGTTA+AGG | + | chr2_3:61852718-61852737 | Msa0304520:intron | 45.0% |
| !! | GACCAACCCAAATGGGTTAA+GGG | + | chr2_3:61852719-61852738 | Msa0304520:intron | 45.0% |
| GTGACACCCTTAACCCATTT+GGG | - | chr2_3:61852728-61852747 | None:intergenic | 45.0% | |
| AGTGACACCCTTAACCCATT+TGG | - | chr2_3:61852729-61852748 | None:intergenic | 45.0% | |
| ACCAGATAATGTTGGGCGTA+GGG | - | chr2_3:61852815-61852834 | None:intergenic | 45.0% | |
| AACCAGATAATGTTGGGCGT+AGG | - | chr2_3:61852816-61852835 | None:intergenic | 45.0% | |
| ACGCCCAACATTATCTGGTT+TGG | + | chr2_3:61852816-61852835 | Msa0304520:intron | 45.0% | |
| !! | CCCAACATTATCTGGTTTGG+TGG | + | chr2_3:61852819-61852838 | Msa0304520:intron | 45.0% |
| CCCACCAAACCAGATAATGT+TGG | - | chr2_3:61852823-61852842 | None:intergenic | 45.0% | |
| ! | CCCAACCACGATTTCTAAGA+TGG | + | chr2_3:61852852-61852871 | Msa0304520:intron | 45.0% |
| ! | TCTAAGATGGTATCAGAGCC+TGG | + | chr2_3:61852865-61852884 | Msa0304520:intron | 45.0% |
| AACTAAATCCCACCGAGTGT+TGG | - | chr2_3:61852974-61852993 | None:intergenic | 45.0% | |
| ! | GGTGGGATTTAGTTCCACAT+CGG | + | chr2_3:61852980-61852999 | Msa0304520:intron | 45.0% |
| !! | ACGTACAAGCCGGTTTTGTA+AGG | + | chr2_3:61853050-61853069 | Msa0304520:intron | 45.0% |
| CAGAGTCCAACACTTACACA+TGG | - | chr2_3:61853429-61853448 | None:intergenic | 45.0% | |
| ATTCCAATAGAAGCCGTGTC+CGG | - | chr2_3:61853466-61853485 | None:intergenic | 45.0% | |
| ! | TTTGTTGGGATGGGTTTGAC+AGG | + | chr2_3:61853681-61853700 | Msa0304520:intron | 45.0% |
| AAGCTGGCAAGATGTTACTC+AGG | + | chr2_3:61853732-61853751 | Msa0304520:CDS | 45.0% | |
| AACCTTAATCTCCTAGTCCC+TGG | - | chr2_3:61853895-61853914 | None:intergenic | 45.0% | |
| TGAAGAAGAAACGCTAGCTG+GGG | - | chr2_3:61854352-61854371 | None:intergenic | 45.0% | |
| CTGAAGAAGAAACGCTAGCT+GGG | - | chr2_3:61854353-61854372 | None:intergenic | 45.0% | |
| ACTGAAGAAGAAACGCTAGC+TGG | - | chr2_3:61854354-61854373 | None:intergenic | 45.0% | |
| TCGATGACTGCAGATTTGTC+AGG | + | chr2_3:61854466-61854485 | Msa0304520:intron | 45.0% | |
| CGATGACTGCAGATTTGTCA+GGG | + | chr2_3:61854467-61854486 | Msa0304520:intron | 45.0% | |
| AGCGACCAAAAACCGTGTAA+CGG | - | chr2_3:61854521-61854540 | None:intergenic | 45.0% | |
| ACGCGCCCAATATTACAAGC+AGG | - | chr2_3:61851909-61851928 | None:intergenic | 50.0% | |
| TGACAGAGTAGCGAAGGTTG+TGG | - | chr2_3:61851967-61851986 | None:intergenic | 50.0% | |
| AGGTTGTGACAGAGTAGCGA+AGG | - | chr2_3:61851973-61851992 | None:intergenic | 50.0% | |
| TCAATCCCACCGTCCACTTA+CGG | + | chr2_3:61852576-61852595 | Msa0304520:intron | 50.0% | |
| AAATGGGTCCCGTAAGTGGA+CGG | - | chr2_3:61852588-61852607 | None:intergenic | 50.0% | |
| ! | TTTGAGAGGAGCACACTCCA+AGG | + | chr2_3:61852677-61852696 | Msa0304520:intron | 50.0% |
| CACCCTTAACCCATTTGGGT+TGG | - | chr2_3:61852724-61852743 | None:intergenic | 50.0% | |
| CCAGATAATGTTGGGCGTAG+GGG | - | chr2_3:61852814-61852833 | None:intergenic | 50.0% | |
| !! | TCTGGTTTGGTGGGTGTGTT+AGG | + | chr2_3:61852829-61852848 | Msa0304520:intron | 50.0% |
| AGATGGTATCAGAGCCTGGT+TGG | + | chr2_3:61852869-61852888 | Msa0304520:intron | 50.0% | |
| GATGGTATCAGAGCCTGGTT+GGG | + | chr2_3:61852870-61852889 | Msa0304520:intron | 50.0% | |
| !! | CAAAACCGGCTTGTACGTTG+AGG | - | chr2_3:61853048-61853067 | None:intergenic | 50.0% |
| !! | ATTAACGGTGTCGACGTGTC+TGG | - | chr2_3:61853375-61853394 | None:intergenic | 50.0% |
| CTCTGACATGTATCGGACAC+CGG | + | chr2_3:61853444-61853463 | Msa0304520:intron | 50.0% | |
| GAAGCTCTTCAGAGTGAAGC+TGG | + | chr2_3:61853716-61853735 | Msa0304520:CDS | 50.0% | |
| AACCTCTTTCTCCAGGGACT+AGG | + | chr2_3:61853881-61853900 | Msa0304520:intron | 50.0% | |
| CTCCAGGGACTAGGAGATTA+AGG | + | chr2_3:61853890-61853909 | Msa0304520:intron | 50.0% | |
| AGAAACGCTAGCTGGGGAAA+GGG | - | chr2_3:61854346-61854365 | None:intergenic | 50.0% | |
| AAGAAACGCTAGCTGGGGAA+AGG | - | chr2_3:61854347-61854366 | None:intergenic | 50.0% | |
| ! | TGGCTTTTCGTGCACGTGGT+GGG | - | chr2_3:61851947-61851966 | None:intergenic | 55.0% |
| ! | GTTGTGGCTTTTCGTGCACG+TGG | - | chr2_3:61851951-61851970 | None:intergenic | 55.0% |
| CAATCCCACCGTCCACTTAC+GGG | + | chr2_3:61852577-61852596 | Msa0304520:intron | 55.0% | |
| ! | GTTGGGCGTAGGGGTGTATT+GGG | - | chr2_3:61852805-61852824 | None:intergenic | 55.0% |
| ! | TGTTGGGCGTAGGGGTGTAT+TGG | - | chr2_3:61852806-61852825 | None:intergenic | 55.0% |
| CCCCTACGCCCAACATTATC+TGG | + | chr2_3:61852811-61852830 | Msa0304520:intron | 55.0% | |
| AGCCTGGTTGGGTCTATCGT+TGG | + | chr2_3:61852881-61852900 | Msa0304520:intron | 55.0% | |
| GCCTGGTTGGGTCTATCGTT+GGG | + | chr2_3:61852882-61852901 | Msa0304520:intron | 55.0% | |
| GTGTGTTAGCGGCCAACACT+CGG | + | chr2_3:61852959-61852978 | Msa0304520:intron | 55.0% | |
| GCACTCCTCAACGTACAAGC+CGG | + | chr2_3:61853040-61853059 | Msa0304520:intron | 55.0% | |
| CATGTATCGGACACCGGACA+CGG | + | chr2_3:61853450-61853469 | Msa0304520:intron | 55.0% | |
| ACACCGGACACGGCTTCTAT+TGG | + | chr2_3:61853460-61853479 | Msa0304520:intron | 55.0% | |
| CTCCTAGTCCCTGGAGAAAG+AGG | - | chr2_3:61853886-61853905 | None:intergenic | 55.0% | |
| ! | GTGGCTTTTCGTGCACGTGG+TGG | - | chr2_3:61851948-61851967 | None:intergenic | 60.0% |
| GCCCAACGATAGACCCAACC+AGG | - | chr2_3:61852886-61852905 | None:intergenic | 60.0% | |
| TCCTGCATCGTCCACGCTTC+AGG | + | chr2_3:61852907-61852926 | Msa0304520:intron | 60.0% | |
| GTCCACGCTTCAGGCCCATT+GGG | + | chr2_3:61852916-61852935 | Msa0304520:intron | 60.0% | |
| ACGCTTCAGCCTGGCCCAAT+GGG | - | chr2_3:61852933-61852952 | None:intergenic | 60.0% | |
| ! | AGCGTGAGGGGGTGTGTTAG+CGG | + | chr2_3:61852948-61852967 | Msa0304520:intron | 60.0% |
| TGTTAGCGGCCAACACTCGG+TGG | + | chr2_3:61852962-61852981 | Msa0304520:intron | 60.0% | |
| GTTAGCGGCCAACACTCGGT+GGG | + | chr2_3:61852963-61852982 | Msa0304520:intron | 60.0% | |
| GGGTCCCGTAAGTGGACGGT+GGG | - | chr2_3:61852584-61852603 | None:intergenic | 65.0% | |
| TGGGTCCCGTAAGTGGACGG+TGG | - | chr2_3:61852585-61852604 | None:intergenic | 65.0% | |
| GCCTGAAGCGTGGACGATGC+AGG | - | chr2_3:61852911-61852930 | None:intergenic | 65.0% | |
| CGTCCACGCTTCAGGCCCAT+TGG | + | chr2_3:61852915-61852934 | Msa0304520:intron | 65.0% | |
| CACGCTTCAGCCTGGCCCAA+TGG | - | chr2_3:61852934-61852953 | None:intergenic | 65.0% | |
| TTGGGCCAGGCTGAAGCGTG+AGG | + | chr2_3:61852934-61852953 | Msa0304520:intron | 65.0% | |
| TGGGCCAGGCTGAAGCGTGA+GGG | + | chr2_3:61852935-61852954 | Msa0304520:intron | 65.0% | |
| GGCCCAATGGGCCTGAAGCG+TGG | - | chr2_3:61852921-61852940 | None:intergenic | 70.0% | |
| CGCTTCAGGCCCATTGGGCC+AGG | + | chr2_3:61852921-61852940 | Msa0304520:intron | 70.0% | |
| GGGCCAGGCTGAAGCGTGAG+GGG | + | chr2_3:61852936-61852955 | Msa0304520:intron | 70.0% | |
| GGCCAGGCTGAAGCGTGAGG+GGG | + | chr2_3:61852937-61852956 | Msa0304520:intron | 70.0% | |
| CACCCCCTCACGCTTCAGCC+TGG | - | chr2_3:61852942-61852961 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 61851815 | 61854835 | 61851815 | ID=Msa0304520;Name=Msa0304520 |
| chr2_3 | mRNA | 61851815 | 61854835 | 61851815 | ID=Msa0304520-mRNA-1;Parent=Msa0304520;Name=Msa0304520-mRNA-1;_AED=0.01;_eAED=0.01;_QI=64|1|1|1|1|1|5|275|177 |
| chr2_3 | exon | 61851815 | 61852071 | 61851815 | ID=Msa0304520-mRNA-1:exon:20542;Parent=Msa0304520-mRNA-1 |
| chr2_3 | exon | 61852169 | 61852226 | 61852169 | ID=Msa0304520-mRNA-1:exon:20543;Parent=Msa0304520-mRNA-1 |
| chr2_3 | exon | 61853703 | 61853810 | 61853703 | ID=Msa0304520-mRNA-1:exon:20544;Parent=Msa0304520-mRNA-1 |
| chr2_3 | exon | 61854291 | 61854383 | 61854291 | ID=Msa0304520-mRNA-1:exon:20545;Parent=Msa0304520-mRNA-1 |
| chr2_3 | exon | 61854479 | 61854835 | 61854479 | ID=Msa0304520-mRNA-1:exon:20546;Parent=Msa0304520-mRNA-1 |
| chr2_3 | five_prime_UTR | 61851815 | 61851878 | 61851815 | ID=Msa0304520-mRNA-1:five_prime_utr;Parent=Msa0304520-mRNA-1 |
| chr2_3 | CDS | 61851879 | 61852071 | 61851879 | ID=Msa0304520-mRNA-1:cds;Parent=Msa0304520-mRNA-1 |
| chr2_3 | CDS | 61852169 | 61852226 | 61852169 | ID=Msa0304520-mRNA-1:cds;Parent=Msa0304520-mRNA-1 |
| chr2_3 | CDS | 61853703 | 61853810 | 61853703 | ID=Msa0304520-mRNA-1:cds;Parent=Msa0304520-mRNA-1 |
| chr2_3 | CDS | 61854291 | 61854383 | 61854291 | ID=Msa0304520-mRNA-1:cds;Parent=Msa0304520-mRNA-1 |
| chr2_3 | CDS | 61854479 | 61854560 | 61854479 | ID=Msa0304520-mRNA-1:cds;Parent=Msa0304520-mRNA-1 |
| chr2_3 | three_prime_UTR | 61854561 | 61854835 | 61854561 | ID=Msa0304520-mRNA-1:three_prime_utr;Parent=Msa0304520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
