Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466840 | XP_003601572.2 | 92.661 | 218 | 10 | 2 | 1 | 218 | 1 | 212 | 4.61e-129 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466840 | G7J9I4 | 92.661 | 218 | 10 | 2 | 1 | 218 | 1 | 212 | 2.20e-129 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0466840 | -0.807220 | 5.622194e-50 | -8.615850e-47 |
| Msa0031330 | Msa0466840 | -0.825125 | 5.559748e-54 | -8.615850e-47 |
| Msa0031990 | Msa0466840 | 0.829628 | 4.627649e-55 | -8.615850e-47 |
| Msa0032470 | Msa0466840 | -0.809416 | 1.912418e-50 | -8.615850e-47 |
| Msa0039900 | Msa0466840 | 0.821600 | 3.703361e-53 | -8.615850e-47 |
| Msa0044000 | Msa0466840 | -0.803401 | 3.548216e-49 | -8.615850e-47 |
| Msa0065680 | Msa0466840 | 0.813578 | 2.384772e-51 | -8.615850e-47 |
| Msa0078640 | Msa0466840 | -0.835408 | 1.707123e-56 | -8.615850e-47 |
| Msa0079070 | Msa0466840 | -0.855247 | 7.171313e-62 | -8.615850e-47 |
| Msa0089820 | Msa0466840 | -0.840587 | 7.949202e-58 | -8.615850e-47 |
| Msa0090570 | Msa0466840 | -0.832135 | 1.123774e-55 | -8.615850e-47 |
| Msa0106620 | Msa0466840 | -0.802128 | 6.498210e-49 | -8.615850e-47 |
| Msa0106710 | Msa0466840 | -0.819855 | 9.328577e-53 | -8.615850e-47 |
| Msa0127800 | Msa0466840 | -0.814525 | 1.473790e-51 | -8.615850e-47 |
| Msa0138020 | Msa0466840 | -0.802806 | 4.711423e-49 | -8.615850e-47 |
| Msa0140500 | Msa0466840 | 0.851247 | 1.005078e-60 | -8.615850e-47 |
| Msa0168800 | Msa0466840 | -0.816153 | 6.403225e-52 | -8.615850e-47 |
| Msa0170230 | Msa0466840 | -0.806745 | 7.085194e-50 | -8.615850e-47 |
| Msa0180500 | Msa0466840 | -0.802986 | 4.323968e-49 | -8.615850e-47 |
| Msa0183850 | Msa0466840 | -0.809730 | 1.637652e-50 | -8.615850e-47 |
| Msa0193470 | Msa0466840 | -0.814328 | 1.629062e-51 | -8.615850e-47 |
| Msa0204840 | Msa0466840 | -0.814364 | 1.600087e-51 | -8.615850e-47 |
| Msa0204960 | Msa0466840 | -0.819506 | 1.120677e-52 | -8.615850e-47 |
| Msa0207040 | Msa0466840 | 0.822444 | 2.361795e-53 | -8.615850e-47 |
| Msa0209500 | Msa0466840 | -0.827341 | 1.650458e-54 | -8.615850e-47 |
| Msa0211150 | Msa0466840 | -0.843828 | 1.102335e-58 | -8.615850e-47 |
| Msa0223340 | Msa0466840 | -0.803614 | 3.204820e-49 | -8.615850e-47 |
| Msa0229380 | Msa0466840 | -0.828250 | 9.978630e-55 | -8.615850e-47 |
| Msa0236510 | Msa0466840 | 0.809937 | 1.478383e-50 | -8.615850e-47 |
| Msa0367870 | Msa0466840 | -0.838678 | 2.493035e-57 | -8.615850e-47 |
| Msa0381610 | Msa0466840 | 0.857091 | 2.067209e-62 | -8.615850e-47 |
| Msa0382370 | Msa0466840 | -0.801409 | 9.128703e-49 | -8.615850e-47 |
| Msa0390400 | Msa0466840 | 0.805399 | 1.360385e-49 | -8.615850e-47 |
| Msa0403770 | Msa0466840 | -0.806754 | 7.054874e-50 | -8.615850e-47 |
| Msa0417330 | Msa0466840 | -0.814433 | 1.544646e-51 | -8.615850e-47 |
| Msa0430920 | Msa0466840 | -0.812558 | 3.991063e-51 | -8.615850e-47 |
| Msa0432160 | Msa0466840 | -0.816068 | 6.691616e-52 | -8.615850e-47 |
| Msa0434180 | Msa0466840 | -0.800260 | 1.566303e-48 | -8.615850e-47 |
| Msa0450400 | Msa0466840 | 0.840263 | 9.660477e-58 | -8.615850e-47 |
| Msa0455760 | Msa0466840 | -0.806187 | 9.290240e-50 | -8.615850e-47 |
| Msa0460590 | Msa0466840 | -0.842439 | 2.584521e-58 | -8.615850e-47 |
| Msa0464680 | Msa0466840 | -0.822860 | 1.889664e-53 | -8.615850e-47 |
| Msa0466840 | Msa0469620 | 0.804314 | 2.292140e-49 | -8.615850e-47 |
| Msa0466840 | Msa0476680 | -0.820061 | 8.366961e-53 | -8.615850e-47 |
| Msa0466840 | Msa0521010 | -0.824832 | 6.517719e-54 | -8.615850e-47 |
| Msa0466840 | Msa0530400 | -0.803484 | 3.410681e-49 | -8.615850e-47 |
| Msa0466840 | Msa0532990 | -0.833463 | 5.256149e-56 | -8.615850e-47 |
| Msa0466840 | Msa0542290 | -0.810128 | 1.344291e-50 | -8.615850e-47 |
| Msa0466840 | Msa0545700 | -0.800632 | 1.316011e-48 | -8.615850e-47 |
| Msa0466840 | Msa0572840 | -0.831631 | 1.496575e-55 | -8.615850e-47 |
| Msa0466840 | Msa0585230 | -0.809866 | 1.530967e-50 | -8.615850e-47 |
| Msa0466840 | Msa0587910 | -0.801381 | 9.247985e-49 | -8.615850e-47 |
| Msa0466840 | Msa0609410 | 0.806627 | 7.505044e-50 | -8.615850e-47 |
| Msa0466840 | Msa0703780 | -0.806104 | 9.673977e-50 | -8.615850e-47 |
| Msa0466840 | Msa0707250 | -0.843326 | 1.500730e-58 | -8.615850e-47 |
| Msa0466840 | Msa0731940 | -0.802734 | 4.874182e-49 | -8.615850e-47 |
| Msa0466840 | Msa0794510 | 0.807889 | 4.054658e-50 | -8.615850e-47 |
| Msa0466840 | Msa0794730 | -0.806774 | 6.986051e-50 | -8.615850e-47 |
| Msa0466840 | Msa0810220 | -0.800218 | 1.597691e-48 | -8.615850e-47 |
| Msa0466840 | Msa0826150 | -0.806756 | 7.046235e-50 | -8.615850e-47 |
| Msa0466840 | Msa0831850 | -0.803676 | 3.111709e-49 | -8.615850e-47 |
| Msa0466840 | Msa0832340 | -0.822202 | 2.687952e-53 | -8.615850e-47 |
| Msa0466840 | Msa0844420 | -0.823219 | 1.558442e-53 | -8.615850e-47 |
| Msa0466840 | Msa0844490 | -0.849940 | 2.341649e-60 | -8.615850e-47 |
| Msa0466840 | Msa0849030 | -0.803620 | 3.195729e-49 | -8.615850e-47 |
| Msa0466840 | Msa0853520 | -0.807575 | 4.727371e-50 | -8.615850e-47 |
| Msa0466840 | Msa0860030 | 0.800517 | 1.388680e-48 | -8.615850e-47 |
| Msa0466840 | Msa0875290 | -0.818146 | 2.281921e-52 | -8.615850e-47 |
| Msa0466840 | Msa0888260 | -0.805334 | 1.403826e-49 | -8.615850e-47 |
| Msa0466840 | Msa0897330 | -0.817108 | 3.911692e-52 | -8.615850e-47 |
| Msa0466840 | Msa0927380 | -0.826926 | 2.074541e-54 | -8.615850e-47 |
| Msa0466840 | Msa0928130 | -0.801592 | 8.371227e-49 | -8.615850e-47 |
| Msa0466840 | Msa0948320 | -0.804236 | 2.379757e-49 | -8.615850e-47 |
| Msa0466840 | Msa0962840 | -0.808023 | 3.797052e-50 | -8.615850e-47 |
| Msa0466840 | Msa0965080 | -0.805250 | 1.461500e-49 | -8.615850e-47 |
| Msa0466840 | Msa0965290 | -0.800863 | 1.180171e-48 | -8.615850e-47 |
| Msa0466840 | Msa0969370 | -0.807336 | 5.313141e-50 | -8.615850e-47 |
| Msa0466840 | Msa0969520 | -0.811281 | 7.574346e-51 | -8.615850e-47 |
| Msa0466840 | Msa0969810 | -0.809240 | 2.086806e-50 | -8.615850e-47 |
| Msa0466840 | Msa0974070 | -0.812218 | 4.735693e-51 | -8.615850e-47 |
| Msa0466840 | Msa0974080 | -0.828377 | 9.301230e-55 | -8.615850e-47 |
| Msa0466840 | Msa0974950 | -0.806370 | 8.502613e-50 | -8.615850e-47 |
| Msa0466840 | Msa0980880 | -0.801529 | 8.625188e-49 | -8.615850e-47 |
| Msa0466840 | Msa1002850 | -0.818065 | 2.381355e-52 | -8.615850e-47 |
| Msa0466840 | Msa1035480 | -0.804319 | 2.286609e-49 | -8.615850e-47 |
| Msa0466840 | Msa1036610 | -0.804664 | 1.938025e-49 | -8.615850e-47 |
| Msa0466840 | Msa1054150 | 0.817239 | 3.655945e-52 | -8.615850e-47 |
| Msa0466840 | Msa1054990 | -0.801877 | 7.316583e-49 | -8.615850e-47 |
| Msa0466840 | Msa1076960 | -0.811867 | 5.647645e-51 | -8.615850e-47 |
| Msa0466840 | Msa1089450 | -0.817139 | 3.849230e-52 | -8.615850e-47 |
| Msa0466840 | Msa1089460 | -0.816068 | 6.689276e-52 | -8.615850e-47 |
| Msa0466840 | Msa1104090 | -0.806701 | 7.237435e-50 | -8.615850e-47 |
| Msa0466840 | Msa1104560 | -0.807088 | 5.996661e-50 | -8.615850e-47 |
| Msa0466840 | Msa1109680 | -0.820653 | 6.120867e-53 | -8.615850e-47 |
| Msa0466840 | Msa1111870 | -0.813611 | 2.344319e-51 | -8.615850e-47 |
| Msa0466840 | Msa1113170 | -0.813719 | 2.220527e-51 | -8.615850e-47 |
| Msa0466840 | Msa1121480 | -0.800880 | 1.171043e-48 | -8.615850e-47 |
| Msa0466840 | Msa1121490 | -0.824216 | 9.103482e-54 | -8.615850e-47 |
| Msa0466840 | Msa1122860 | -0.819000 | 1.460929e-52 | -8.615850e-47 |
| Msa0466840 | Msa1137570 | -0.851299 | 9.712875e-61 | -8.615850e-47 |
| Msa0466840 | Msa1162780 | -0.831832 | 1.334593e-55 | -8.615850e-47 |
| Msa0466840 | Msa1163730 | -0.801542 | 8.573928e-49 | -8.615850e-47 |
| Msa0466840 | Msa1199830 | 0.822774 | 1.978465e-53 | -8.615850e-47 |
| Msa0466840 | Msa1204100 | 0.810472 | 1.133399e-50 | -8.615850e-47 |
| Msa0466840 | Msa1210020 | -0.825777 | 3.896101e-54 | -8.615850e-47 |
| Msa0466840 | Msa1246360 | -0.822448 | 2.356092e-53 | -8.615850e-47 |
| Msa0466840 | Msa1254730 | -0.810905 | 9.136608e-51 | -8.615850e-47 |
| Msa0466840 | Msa1271130 | -0.824443 | 8.049545e-54 | -8.615850e-47 |
| Msa0466840 | Msa1286800 | -0.800520 | 1.387069e-48 | -8.615850e-47 |
| Msa0466840 | Msa1287190 | -0.801228 | 9.942382e-49 | -8.615850e-47 |
| Msa0466840 | Msa1294820 | -0.800482 | 1.412017e-48 | -8.615850e-47 |
| Msa0466840 | Msa1298510 | -0.824947 | 6.124956e-54 | -8.615850e-47 |
| Msa0466840 | Msa1305810 | -0.869573 | 2.797956e-66 | -8.615850e-47 |
| Msa0466840 | Msa1308870 | -0.836541 | 8.807423e-57 | -8.615850e-47 |
| Msa0466840 | Msa1310770 | 0.803918 | 2.771924e-49 | -8.615850e-47 |
| Msa0466840 | Msa1313320 | -0.802227 | 6.200229e-49 | -8.615850e-47 |
| Msa0466840 | Msa1325860 | 0.818041 | 2.410404e-52 | -8.615850e-47 |
| Msa0466840 | Msa1329050 | 0.814899 | 1.217970e-51 | -8.615850e-47 |
| Msa0466840 | Msa1346840 | -0.807158 | 5.793979e-50 | -8.615850e-47 |
| Msa0466840 | Msa1393570 | -0.819245 | 1.284995e-52 | -8.615850e-47 |
| Msa0466840 | Msa1401990 | -0.800326 | 1.519136e-48 | -8.615850e-47 |
| Msa0466840 | Msa1412060 | 0.801335 | 9.454254e-49 | -8.615850e-47 |
| Msa0466840 | Msa1419690 | -0.812008 | 5.260841e-51 | -8.615850e-47 |
| Msa0466840 | Msa1445390 | 0.849451 | 3.207111e-60 | -8.615850e-47 |
| Msa0466840 | Msa1449340 | 0.847249 | 1.302929e-59 | -8.615850e-47 |
| Msa0466840 | Msa1452710 | -0.807399 | 5.152282e-50 | -8.615850e-47 |
| Msa0466840 | Msa1454570 | -0.806395 | 8.399286e-50 | -8.615850e-47 |
| Msa0466840 | Msa1460320 | 0.813220 | 2.857923e-51 | -8.615850e-47 |
| Msa0466840 | Msa1466540 | -0.817307 | 3.529251e-52 | -8.615850e-47 |
| Msa0241140 | Msa0466840 | -0.807683 | 4.483199e-50 | -8.615850e-47 |
| Msa0249860 | Msa0466840 | -0.805755 | 1.145187e-49 | -8.615850e-47 |
| Msa0251640 | Msa0466840 | -0.802874 | 4.560567e-49 | -8.615850e-47 |
| Msa0257490 | Msa0466840 | -0.814608 | 1.412851e-51 | -8.615850e-47 |
| Msa0267370 | Msa0466840 | -0.815425 | 9.304768e-52 | -8.615850e-47 |
| Msa0271770 | Msa0466840 | -0.802445 | 5.591918e-49 | -8.615850e-47 |
| Msa0281530 | Msa0466840 | -0.807086 | 6.000343e-50 | -8.615850e-47 |
| Msa0297790 | Msa0466840 | -0.808562 | 2.914350e-50 | -8.615850e-47 |
| Msa0317960 | Msa0466840 | -0.803483 | 3.412670e-49 | -8.615850e-47 |
| Msa0317970 | Msa0466840 | -0.832943 | 7.082765e-56 | -8.615850e-47 |
| Msa0320590 | Msa0466840 | -0.804512 | 2.084641e-49 | -8.615850e-47 |
| Msa0335800 | Msa0466840 | -0.823808 | 1.134922e-53 | -8.615850e-47 |
| Msa0336320 | Msa0466840 | -0.803498 | 3.387419e-49 | -8.615850e-47 |
| Msa0343850 | Msa0466840 | -0.831947 | 1.250493e-55 | -8.615850e-47 |
| Msa0350320 | Msa0466840 | 0.800910 | 1.154590e-48 | -8.615850e-47 |
| Msa0363790 | Msa0466840 | -0.815205 | 1.041611e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466840 | MtrunA17_Chr3g0121011 | 92.661 | 218 | 10 | 2 | 1 | 218 | 22 | 233 | 1.93e-132 | 372 |
| Msa0466840 | MtrunA17_Chr3g0120991 | 46.809 | 188 | 77 | 5 | 47 | 218 | 39 | 219 | 3.31e-40 | 137 |
| Msa0466840 | MtrunA17_Chr3g0120941 | 37.657 | 239 | 119 | 8 | 1 | 218 | 14 | 243 | 5.12e-36 | 127 |
| Msa0466840 | MtrunA17_Chr3g0120981 | 40.090 | 222 | 111 | 8 | 1 | 217 | 1 | 205 | 5.99e-36 | 125 |
| Msa0466840 | MtrunA17_Chr3g0120951 | 38.393 | 224 | 115 | 7 | 1 | 218 | 1 | 207 | 4.10e-34 | 121 |
| Msa0466840 | MtrunA17_Chr3g0120591 | 37.555 | 229 | 124 | 9 | 1 | 217 | 1 | 222 | 6.16e-31 | 113 |
| Msa0466840 | MtrunA17_Chr3g0120641 | 36.522 | 230 | 126 | 11 | 1 | 217 | 19 | 241 | 6.02e-25 | 98.2 |
| Msa0466840 | MtrunA17_Chr3g0120961 | 33.784 | 222 | 110 | 6 | 1 | 218 | 1 | 189 | 3.84e-23 | 92.0 |
| Msa0466840 | MtrunA17_Chr3g0119711 | 33.173 | 208 | 117 | 9 | 21 | 217 | 2 | 198 | 1.59e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 107 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCTTTAGCAAATAAATT+TGG | 0.179740 | 3_3:-67908976 | Msa0466840:CDS |
| GGGTTTGAAGTACGAGTTTA+AGG | 0.181770 | 3_3:-67908765 | Msa0466840:CDS |
| TCAAATTGGTAACAATTTAT+AGG | 0.228835 | 3_3:-67906539 | Msa0466840:three_prime_UTR |
| CTTCCCTGCTATTACTTTCC+TGG | 0.247794 | 3_3:-67907080 | Msa0466840:three_prime_UTR |
| TCCGAATCCGATTCTGGTTC+TGG | 0.264411 | 3_3:+67910651 | None:intergenic |
| CAAATAAATTTGGCCATAAC+TGG | 0.265315 | 3_3:-67908966 | Msa0466840:CDS |
| TCAGATTCCGAATCCGATTC+TGG | 0.272868 | 3_3:+67910645 | None:intergenic |
| GGATGAACATCTTCTGGTTT+TGG | 0.280325 | 3_3:+67908677 | None:intergenic |
| TTGGAAGGATGAACATCTTC+TGG | 0.292357 | 3_3:+67908671 | None:intergenic |
| TTATTTGCTAAAGGTGGAAT+AGG | 0.323459 | 3_3:+67908982 | None:intergenic |
| GCCATTAGTCATATTCCTTT+AGG | 0.349715 | 3_3:-67908728 | Msa0466840:CDS |
| CGGCGTCACCCCACCTCCTC+TGG | 0.352863 | 3_3:-67910712 | Msa0466840:CDS |
| CTCTCTTATAGACTTCAAAT+TGG | 0.360570 | 3_3:-67906553 | Msa0466840:three_prime_UTR |
| ATCTGTTATGTGAAACGGTC+TGG | 0.364592 | 3_3:+67907371 | None:intergenic |
| TCGACTCTCCAAGTGTGCTT+TGG | 0.365473 | 3_3:-67908899 | Msa0466840:CDS |
| ACATTTGCTAAGGTTGGAAC+AGG | 0.370038 | 3_3:+67907411 | None:intergenic |
| CGGAACCGGAACCAATTGAT+TGG | 0.370659 | 3_3:-67910620 | Msa0466840:CDS |
| TAGGACAGGTTGCCCGGCAT+TGG | 0.405122 | 3_3:-67907049 | Msa0466840:three_prime_UTR |
| CAGTCCCAATCAATTGGTTC+CGG | 0.406500 | 3_3:+67910615 | None:intergenic |
| TTGAAGAATGTCGATGGAAT+TGG | 0.407957 | 3_3:-67910748 | Msa0466840:exon |
| CACGTCTAGGACAGGTTGCC+CGG | 0.414638 | 3_3:-67907055 | Msa0466840:three_prime_UTR |
| TATTTGCTAAAGGTGGAATA+GGG | 0.418257 | 3_3:+67908983 | None:intergenic |
| ATGTAATGTAATAAGTAGTA+AGG | 0.419396 | 3_3:+67907146 | None:intergenic |
| CGACATTCTTCAACACTTGA+CGG | 0.430458 | 3_3:+67910758 | None:intergenic |
| AAAATACAATCATGACAATC+AGG | 0.434603 | 3_3:-67907304 | Msa0466840:intron |
| TGGCCAAATTTATTTGCTAA+AGG | 0.435844 | 3_3:+67908973 | None:intergenic |
| CCACATACATTTGCTAAGGT+TGG | 0.436602 | 3_3:+67907405 | None:intergenic |
| TTATCCTGAAGATATTCAAT+TGG | 0.436706 | 3_3:+67910582 | None:intergenic |
| TACAGTCACAGACGTGGGTC+TGG | 0.437710 | 3_3:+67908630 | None:intergenic |
| TCGCAGCTTTCCAGAGGAGG+TGG | 0.437827 | 3_3:+67910702 | None:intergenic |
| ATCGTCTATAGGAACAGGTC+TGG | 0.442132 | 3_3:+67908942 | None:intergenic |
| GATACCCAGTCCCAATCAAT+TGG | 0.444473 | 3_3:+67910609 | None:intergenic |
| CACGACTTGATCACAGGTTC+AGG | 0.445281 | 3_3:+67908605 | None:intergenic |
| GAAACCAATTGAATATCTTC+AGG | 0.445477 | 3_3:-67910586 | Msa0466840:CDS |
| AAAGTACAACAAGGACAATC+AGG | 0.451367 | 3_3:-67908875 | Msa0466840:intron |
| AACCACAGGTGGTCCAATGC+CGG | 0.454866 | 3_3:+67907036 | None:intergenic |
| GAACAGGTCTGGGCCAGTTA+TGG | 0.459899 | 3_3:+67908953 | None:intergenic |
| TTCGGAATCTGATTCGGAAC+CGG | 0.461844 | 3_3:-67910634 | Msa0466840:CDS |
| CGGAACCAATTGATTGGGAC+TGG | 0.463007 | 3_3:-67910614 | Msa0466840:CDS |
| GAAAGTAATAGCAGGGAAGT+TGG | 0.467046 | 3_3:+67907084 | None:intergenic |
| ACAAGAAGAGGCTGAAGAAA+AGG | 0.467705 | 3_3:-67910487 | Msa0466840:CDS |
| CCAAATTTATTTGCTAAAGG+TGG | 0.470541 | 3_3:+67908976 | None:intergenic |
| GGCTGCTCGTGATCGTCTAT+AGG | 0.476040 | 3_3:+67908931 | None:intergenic |
| TCGTGATCGTCTATAGGAAC+AGG | 0.480282 | 3_3:+67908937 | None:intergenic |
| AACGGAACCAGAACCAGAAT+CGG | 0.480456 | 3_3:-67910658 | Msa0466840:CDS |
| ACCAGAACCAGAATCGGATT+CGG | 0.482522 | 3_3:-67910652 | Msa0466840:CDS |
| ACCACAGGTGGTCCAATGCC+GGG | 0.484448 | 3_3:+67907037 | None:intergenic |
| ATCGGATTCGGAATCTGATT+CGG | 0.486643 | 3_3:-67910640 | Msa0466840:CDS |
| TGACCTCTCCAAACTTGCCC+TGG | 0.487308 | 3_3:-67907328 | Msa0466840:three_prime_UTR |
| GGAACCGGAACCAATTGATT+GGG | 0.488378 | 3_3:-67910619 | Msa0466840:CDS |
| TCCTCGCAGCTTTCCAGAGG+AGG | 0.494982 | 3_3:+67910699 | None:intergenic |
| TCTGTTATGTGAAACGGTCT+GGG | 0.495398 | 3_3:+67907372 | None:intergenic |
| TCCTGGCCCACGTCTAGGAC+AGG | 0.497962 | 3_3:-67907063 | Msa0466840:three_prime_UTR |
| ACCTGTCCTAGACGTGGGCC+AGG | 0.505299 | 3_3:+67907062 | None:intergenic |
| CGCAGCTTTCCAGAGGAGGT+GGG | 0.508578 | 3_3:+67910703 | None:intergenic |
| TGTAATGTAATAAGTAGTAA+GGG | 0.509079 | 3_3:+67907147 | None:intergenic |
| TACATGCTTAGATATTTAGT+AGG | 0.509247 | 3_3:-67906949 | Msa0466840:three_prime_UTR |
| TTACATTACATTTGAAGCAA+AGG | 0.512602 | 3_3:-67907134 | Msa0466840:three_prime_UTR |
| GCCTAAAGGAATATGACTAA+TGG | 0.514370 | 3_3:+67908727 | None:intergenic |
| AAGGTCAACAAACTCGTACT+TGG | 0.523388 | 3_3:+67907195 | None:intergenic |
| CTTGAAAAGAAATTTGGCAT+AGG | 0.532598 | 3_3:+67906478 | None:intergenic |
| TGGAATAGGGATAGCATCAA+AGG | 0.534895 | 3_3:+67908996 | None:intergenic |
| CGGGCAACCTGTCCTAGACG+TGG | 0.535590 | 3_3:+67907056 | None:intergenic |
| CGATCATCTGTTATGTGAAA+CGG | 0.539884 | 3_3:+67907366 | None:intergenic |
| GCCTCTTAGTTGCCTTGACA+AGG | 0.541690 | 3_3:+67907176 | None:intergenic |
| TGGGCCAGGAAAGTAATAGC+AGG | 0.542715 | 3_3:+67907076 | None:intergenic |
| TACTTTCCTGGCCCACGTCT+AGG | 0.546511 | 3_3:-67907068 | Msa0466840:three_prime_UTR |
| TTGAAGTAACATTATTGTCA+TGG | 0.548143 | 3_3:+67906977 | None:intergenic |
| CGAGTTTAAGGAGCTTGTCA+AGG | 0.553566 | 3_3:-67908753 | Msa0466840:CDS |
| ATGGAACACGACTTGATCAC+AGG | 0.555050 | 3_3:+67908599 | None:intergenic |
| GTTGCCACATACATTTGCTA+AGG | 0.555185 | 3_3:+67907401 | None:intergenic |
| AGTTGGAAGGATGAACATGA+TGG | 0.560819 | 3_3:+67907101 | None:intergenic |
| GTAATGTAGTAGCTGCCTAA+AGG | 0.562791 | 3_3:+67908713 | None:intergenic |
| GCAGCTTTCCAGAGGAGGTG+GGG | 0.563645 | 3_3:+67910704 | None:intergenic |
| CGAGTTTGTTGACCTTGTCA+AGG | 0.564814 | 3_3:-67907188 | Msa0466840:three_prime_UTR |
| TGGAACAGGGATAGCATCGA+AGG | 0.569305 | 3_3:+67907425 | None:intergenic |
| GCCCGGCATTGGACCACCTG+TGG | 0.570392 | 3_3:-67907038 | Msa0466840:three_prime_UTR |
| GTTGGAAGGATGAACATGAT+GGG | 0.570527 | 3_3:+67907102 | None:intergenic |
| GTAATAGCAGGGAAGTTGGA+AGG | 0.570637 | 3_3:+67907088 | None:intergenic |
| GAAAGTGGTAGCAGACATGT+TGG | 0.570739 | 3_3:+67908652 | None:intergenic |
| AGTCGTGAGAGAACAAGAAG+AGG | 0.579539 | 3_3:-67910499 | Msa0466840:CDS |
| TCGTCTATAGGAACAGGTCT+GGG | 0.582583 | 3_3:+67908943 | None:intergenic |
| GGAATAGGGATAGCATCAAA+GGG | 0.583911 | 3_3:+67908997 | None:intergenic |
| ACAGACGTGGGTCTGGAAAG+TGG | 0.585593 | 3_3:+67908637 | None:intergenic |
| ATGGAACACGACTCAACCAC+AGG | 0.593707 | 3_3:+67907022 | None:intergenic |
| CCAACCTTAGCAAATGTATG+TGG | 0.599683 | 3_3:-67907405 | Msa0466840:three_prime_UTR |
| CAAGTGTTGAAGAATGTCGA+TGG | 0.604854 | 3_3:-67910754 | Msa0466840:exon |
| ACCTTGTCAAGGCAACTAAG+AGG | 0.608978 | 3_3:-67907177 | Msa0466840:three_prime_UTR |
| AGACCCACGTCTGTGACTGT+AGG | 0.612955 | 3_3:-67908628 | Msa0466840:CDS |
| GTAATGTAATAAGTAGTAAG+GGG | 0.621479 | 3_3:+67907148 | None:intergenic |
| GTGGTAGCAGACATGTTGGA+AGG | 0.625175 | 3_3:+67908656 | None:intergenic |
| CAGGCCTACAGTCACAGACG+TGG | 0.625811 | 3_3:+67908624 | None:intergenic |
| TTTCCAGGGCAAGTTTGGAG+AGG | 0.629404 | 3_3:+67907325 | None:intergenic |
| TTGGAGAGTCGAATGAGAAG+TGG | 0.639275 | 3_3:+67908910 | None:intergenic |
| GGAACCAATTGATTGGGACT+GGG | 0.640773 | 3_3:-67910613 | Msa0466840:CDS |
| CATTTGCTAAGGTTGGAACA+GGG | 0.643988 | 3_3:+67907412 | None:intergenic |
| GGGCCAGGAAAGTAATAGCA+GGG | 0.648257 | 3_3:+67907077 | None:intergenic |
| GAATTGGATACAGTGTTGCA+CGG | 0.652051 | 3_3:-67910732 | Msa0466840:CDS |
| ATTTGAAGTCTATAAGAGAG+TGG | 0.659933 | 3_3:+67906556 | None:intergenic |
| GGGCAACCTGTCCTAGACGT+GGG | 0.668086 | 3_3:+67907057 | None:intergenic |
| GGAACAGGGATAGCATCGAA+GGG | 0.668541 | 3_3:+67907426 | None:intergenic |
| ACCTCCTCTGGAAAGCTGCG+AGG | 0.671307 | 3_3:-67910700 | Msa0466840:CDS |
| GAACACGACTCAACCACAGG+TGG | 0.679565 | 3_3:+67907025 | None:intergenic |
| TGCTTTGGAAAAGTACAACA+AGG | 0.694400 | 3_3:-67908884 | Msa0466840:CDS |
| GGTCTTCAAATACTCAGCGA+CGG | 0.718541 | 3_3:+67910464 | None:intergenic |
| ACGTACACTTATGTTACGAG+CGG | 0.729892 | 3_3:+67910443 | None:intergenic |
| AGGCCTACAGTCACAGACGT+GGG | 0.739662 | 3_3:+67908625 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTATTTGTTCTAAAA+AGG | + | chr3_3:67907183-67907202 | None:intergenic | 10.0% |
| !!! | AATTTGAGATAAATTTTTTT+AGG | - | chr3_3:67907747-67907766 | Msa0466840:intron | 10.0% |
| !! | TAATTCAAAAATAAAAACTA+AGG | + | chr3_3:67907855-67907874 | None:intergenic | 10.0% |
| !!! | ATAATATTGTTTTTAATACA+AGG | - | chr3_3:67907986-67908005 | Msa0466840:intron | 10.0% |
| !!! | TAATATTGTTTTTAATACAA+GGG | - | chr3_3:67907987-67908006 | Msa0466840:intron | 10.0% |
| !! | GTTAAATTAAAACAAAAATT+AGG | + | chr3_3:67908196-67908215 | None:intergenic | 10.0% |
| !!! | TATTCTATTTTGTTTTATTT+AGG | - | chr3_3:67908466-67908485 | Msa0466840:intron | 10.0% |
| !!! | ATTCTATTTTGTTTTATTTA+GGG | - | chr3_3:67908467-67908486 | Msa0466840:intron | 10.0% |
| !!! | TTACATGTTTAATATTTTAT+AGG | - | chr3_3:67908726-67908745 | Msa0466840:CDS | 10.0% |
| !!! | TATATTTTTTATGAATTCAT+GGG | + | chr3_3:67910476-67910495 | None:intergenic | 10.0% |
| !!! | TTATATTTTTTATGAATTCA+TGG | + | chr3_3:67910477-67910496 | None:intergenic | 10.0% |
| !! | ATTATAATTTAATTAATTGG+TGG | - | chr3_3:67910518-67910537 | Msa0466840:CDS | 10.0% |
| !! | TTATAATTTAATTAATTGGT+GGG | - | chr3_3:67910519-67910538 | Msa0466840:CDS | 10.0% |
| !!! | TTAATATTATTTTAATTGGA+TGG | + | chr3_3:67910610-67910629 | None:intergenic | 10.0% |
| !! | TTGTTTGATTGAAATTTAAT+GGG | + | chr3_3:67906917-67906936 | None:intergenic | 15.0% |
| !!! | TTTTGAATTGAAAAAACAAA+TGG | + | chr3_3:67907127-67907146 | None:intergenic | 15.0% |
| !! | AAATAATTAATGTACATTGA+GGG | + | chr3_3:67907308-67907327 | None:intergenic | 15.0% |
| !! | AAAATGTGACATAAATATAT+TGG | + | chr3_3:67907352-67907371 | None:intergenic | 15.0% |
| !!! | ATTAATATTGATGATTTTGA+TGG | - | chr3_3:67907600-67907619 | Msa0466840:intron | 15.0% |
| !!! | TTTTTATTTTTGAATTACCA+TGG | - | chr3_3:67907858-67907877 | Msa0466840:intron | 15.0% |
| !! | ATAAAGATATAAACAGATAT+TGG | + | chr3_3:67908426-67908445 | None:intergenic | 15.0% |
| !! | ATTATAAAAACAAAATGCTT+GGG | + | chr3_3:67909045-67909064 | None:intergenic | 15.0% |
| !! | TATTATAAAAACAAAATGCT+TGG | + | chr3_3:67909046-67909065 | None:intergenic | 15.0% |
| !!! | TGATATGAATATATGTTTTT+TGG | - | chr3_3:67909199-67909218 | Msa0466840:intron | 15.0% |
| !!! | CTTGTATAGAATTTTATTTA+TGG | - | chr3_3:67909247-67909266 | Msa0466840:intron | 15.0% |
| !! | AATGAAACATAGATATAATA+TGG | + | chr3_3:67909999-67910018 | None:intergenic | 15.0% |
| !! | ATATTAAATTGAATTAGAGA+TGG | + | chr3_3:67910371-67910390 | None:intergenic | 15.0% |
| !! | TATAATTTAATTAATTGGTG+GGG | - | chr3_3:67910520-67910539 | Msa0466840:CDS | 15.0% |
| !! | TTTGGATTTATGATATTTGA+TGG | - | chr3_3:67906868-67906887 | Msa0466840:intron | 20.0% |
| !! | ATTTATGATATTTGATGGAA+TGG | - | chr3_3:67906873-67906892 | Msa0466840:intron | 20.0% |
| !! | CTTGTTTGATTGAAATTTAA+TGG | + | chr3_3:67906918-67906937 | None:intergenic | 20.0% |
| !!! | TAATGAAAATTTTTGAAGGA+TGG | + | chr3_3:67906980-67906999 | None:intergenic | 20.0% |
| !! | TTAAATTATGTTTCATTCCA+TGG | + | chr3_3:67907020-67907039 | None:intergenic | 20.0% |
| !! | ACTCAAAAGATCTTATAAAT+GGG | + | chr3_3:67907244-67907263 | None:intergenic | 20.0% |
| !! | AACTCAAAAGATCTTATAAA+TGG | + | chr3_3:67907245-67907264 | None:intergenic | 20.0% |
| !! | GAAATAATTAATGTACATTG+AGG | + | chr3_3:67907309-67907328 | None:intergenic | 20.0% |
| !!! | TAACTAGTTAATGTTTTCAT+AGG | + | chr3_3:67907377-67907396 | None:intergenic | 20.0% |
| !! | ATGTGTATCCTTATTAATTA+TGG | - | chr3_3:67907627-67907646 | Msa0466840:intron | 20.0% |
| !! | TGATTAAAATGCAATAGATA+AGG | - | chr3_3:67907669-67907688 | Msa0466840:intron | 20.0% |
| !! | GATTAAAATGCAATAGATAA+GGG | - | chr3_3:67907670-67907689 | Msa0466840:intron | 20.0% |
| !!! | AGAATGAAATATAATGGAAT+GGG | + | chr3_3:67908137-67908156 | None:intergenic | 20.0% |
| !! | AAATAGAAATGTTATTACCA+TGG | + | chr3_3:67908699-67908718 | None:intergenic | 20.0% |
| !! | AATATTTGTAGGCTTAAAAA+TGG | - | chr3_3:67908758-67908777 | Msa0466840:CDS | 20.0% |
| !! | TTTAAACTTGCATTTGATTA+TGG | - | chr3_3:67908798-67908817 | Msa0466840:intron | 20.0% |
| !! | TTATAAAAACAAAATGCTTG+GGG | + | chr3_3:67909044-67909063 | None:intergenic | 20.0% |
| !! | AACATATATTCATATCACAA+GGG | + | chr3_3:67909196-67909215 | None:intergenic | 20.0% |
| !! | AAACATATATTCATATCACA+AGG | + | chr3_3:67909197-67909216 | None:intergenic | 20.0% |
| !!! | TGAATATATGTTTTTTGGTT+TGG | - | chr3_3:67909204-67909223 | Msa0466840:intron | 20.0% |
| !! | CATAACAATTCTTCATAATT+CGG | + | chr3_3:67909285-67909304 | None:intergenic | 20.0% |
| !!! | GAATTTTCTTGTCTTAAAAA+TGG | - | chr3_3:67909376-67909395 | Msa0466840:intron | 20.0% |
| !! | AAACTAGTACAAGTATTATT+GGG | + | chr3_3:67909512-67909531 | None:intergenic | 20.0% |
| !!! | AGTTTTGTTTCTCTTATATT+AGG | - | chr3_3:67910031-67910050 | Msa0466840:intron | 20.0% |
| !!! | GTTTTGTTTCTCTTATATTA+GGG | - | chr3_3:67910032-67910051 | Msa0466840:intron | 20.0% |
| !! | TGTAATGTAATAAGTAGTAA+GGG | + | chr3_3:67910108-67910127 | None:intergenic | 20.0% |
| !! | ATGTAATGTAATAAGTAGTA+AGG | + | chr3_3:67910109-67910128 | None:intergenic | 20.0% |
| !!! | TGCATTTCAATCAAAATTTT+CGG | + | chr3_3:67910428-67910447 | None:intergenic | 20.0% |
| !!! | TCAAATTGGTAACAATTTAT+AGG | - | chr3_3:67910713-67910732 | Msa0466840:CDS | 20.0% |
| !!! | GATTTTCTTGAAAAGAAATT+TGG | + | chr3_3:67910783-67910802 | None:intergenic | 20.0% |
| ! | TTATCCTGAAGATATTCAAT+TGG | + | chr3_3:67906673-67906692 | None:intergenic | 25.0% |
| !! | GAGGTAATGAAAATTTTTGA+AGG | + | chr3_3:67906984-67907003 | None:intergenic | 25.0% |
| !! | ATATACAGAGCATTATGTAA+GGG | + | chr3_3:67907089-67907108 | None:intergenic | 25.0% |
| !! | AATATACAGAGCATTATGTA+AGG | + | chr3_3:67907090-67907109 | None:intergenic | 25.0% |
| !! | TTTTCAATTCAAAATGTCTC+AGG | - | chr3_3:67907133-67907152 | Msa0466840:three_prime_UTR | 25.0% |
| ! | CTCAAAAGATCTTATAAATG+GGG | + | chr3_3:67907243-67907262 | None:intergenic | 25.0% |
| ! | ACATAAATATATTGGATCAG+GGG | + | chr3_3:67907344-67907363 | None:intergenic | 25.0% |
| ! | GACATAAATATATTGGATCA+GGG | + | chr3_3:67907345-67907364 | None:intergenic | 25.0% |
| ! | TGACATAAATATATTGGATC+AGG | + | chr3_3:67907346-67907365 | None:intergenic | 25.0% |
| ! | TAACTAGTTATCTCTCATAA+AGG | - | chr3_3:67907387-67907406 | Msa0466840:three_prime_UTR | 25.0% |
| ! | TCCTTATTAATTATGGTTAG+TGG | - | chr3_3:67907634-67907653 | Msa0466840:intron | 25.0% |
| ! | TCCACTAACCATAATTAATA+AGG | + | chr3_3:67907638-67907657 | None:intergenic | 25.0% |
| ! | TGTTGTATTAACATCTTAGA+AGG | - | chr3_3:67907717-67907736 | Msa0466840:intron | 25.0% |
| ! | GTTGTATTAACATCTTAGAA+GGG | - | chr3_3:67907718-67907737 | Msa0466840:intron | 25.0% |
| !! | ATTTTTGAATTACCATGGTT+TGG | - | chr3_3:67907863-67907882 | Msa0466840:intron | 25.0% |
| !! | GAGCAAACAATAGATTTTAA+AGG | + | chr3_3:67907934-67907953 | None:intergenic | 25.0% |
| !! | TTTTAATACAAGGGTAGAAA+TGG | - | chr3_3:67907996-67908015 | Msa0466840:intron | 25.0% |
| !! | TAATTTTCCATTCCATTGTT+TGG | + | chr3_3:67908059-67908078 | None:intergenic | 25.0% |
| !! | GAATGAAATATAATGGAATG+GGG | + | chr3_3:67908136-67908155 | None:intergenic | 25.0% |
| !! | CAGAATGAAATATAATGGAA+TGG | + | chr3_3:67908138-67908157 | None:intergenic | 25.0% |
| !!! | ATAACATTGAAGTTGATAAC+TGG | + | chr3_3:67908449-67908468 | None:intergenic | 25.0% |
| ! | GGAGAAGAATAAATATTTGT+AGG | - | chr3_3:67908747-67908766 | Msa0466840:CDS | 25.0% |
| ! | ATCATATACTAACTTATTGC+TGG | + | chr3_3:67908895-67908914 | None:intergenic | 25.0% |
| ! | AAGTTAGTATATGATAGTCT+TGG | - | chr3_3:67908900-67908919 | Msa0466840:CDS | 25.0% |
| !!! | TTCCTAGTCATTTTACTTTT+GGG | - | chr3_3:67908971-67908990 | Msa0466840:CDS | 25.0% |
| ! | TACAAATCATTCAAAGACAA+AGG | + | chr3_3:67909075-67909094 | None:intergenic | 25.0% |
| ! | CACACAAATAGAGTTAAAAA+AGG | + | chr3_3:67909163-67909182 | None:intergenic | 25.0% |
| ! | GAAACTAGTACAAGTATTAT+TGG | + | chr3_3:67909513-67909532 | None:intergenic | 25.0% |
| !! | AAAAGCCTTATATCTCATTA+AGG | + | chr3_3:67909547-67909566 | None:intergenic | 25.0% |
| !! | TAATGAGATATAAGGCTTTT+AGG | - | chr3_3:67909547-67909566 | Msa0466840:intron | 25.0% |
| ! | TTGTTTCCATCTTAAATTGT+TGG | - | chr3_3:67909573-67909592 | Msa0466840:intron | 25.0% |
| ! | ATGATTCCAACAATTTAAGA+TGG | + | chr3_3:67909582-67909601 | None:intergenic | 25.0% |
| ! | AAAATACAATCATGACAATC+AGG | - | chr3_3:67909948-67909967 | Msa0466840:intron | 25.0% |
| ! | GAAACATAGATATAATATGG+TGG | + | chr3_3:67909996-67910015 | None:intergenic | 25.0% |
| ! | GTAATGTAATAAGTAGTAAG+GGG | + | chr3_3:67910107-67910126 | None:intergenic | 25.0% |
| !! | TTACATTACATTTGAAGCAA+AGG | - | chr3_3:67910118-67910137 | Msa0466840:intron | 25.0% |
| !! | ATTTTGTTACATAAGCTTCA+TGG | + | chr3_3:67910252-67910271 | None:intergenic | 25.0% |
| ! | TTGAAGTAACATTATTGTCA+TGG | + | chr3_3:67910278-67910297 | None:intergenic | 25.0% |
| ! | TACATGCTTAGATATTTAGT+AGG | - | chr3_3:67910303-67910322 | Msa0466840:intron | 25.0% |
| ! | ACATTGTGTAACAAAAATTC+TGG | + | chr3_3:67910546-67910565 | None:intergenic | 25.0% |
| GAAACCAATTGAATATCTTC+AGG | - | chr3_3:67906666-67906685 | Msa0466840:intron | 30.0% | |
| TGATATTTGATGGAATGGAT+TGG | - | chr3_3:67906878-67906897 | Msa0466840:intron | 30.0% | |
| ! | TATACAGAGCATTATGTAAG+GGG | + | chr3_3:67907088-67907107 | None:intergenic | 30.0% |
| AAAGATCTTATAAATGGGGA+TGG | + | chr3_3:67907239-67907258 | None:intergenic | 30.0% | |
| ATCTCTCATAAAGGTAAACA+TGG | - | chr3_3:67907396-67907415 | Msa0466840:three_prime_UTR | 30.0% | |
| ! | ATTCACGTGTTTTTCTCTAA+AGG | - | chr3_3:67907468-67907487 | Msa0466840:intron | 30.0% |
| ! | TTCACGTGTTTTTCTCTAAA+GGG | - | chr3_3:67907469-67907488 | Msa0466840:intron | 30.0% |
| ! | ACGGATAGAGTATTAACTTA+TGG | + | chr3_3:67907534-67907553 | None:intergenic | 30.0% |
| !! | TGTCCTATTTGAGTTTTACA+CGG | - | chr3_3:67907565-67907584 | Msa0466840:intron | 30.0% |
| CATTCCATTGTTTGGAAATT+GGG | + | chr3_3:67908051-67908070 | None:intergenic | 30.0% | |
| CATCATAAAGTAACCAAACA+AGG | - | chr3_3:67908087-67908106 | Msa0466840:intron | 30.0% | |
| TAAAGTAACCAAACAAGGAA+TGG | - | chr3_3:67908092-67908111 | Msa0466840:intron | 30.0% | |
| GAGAGCAGAATGAAATATAA+TGG | + | chr3_3:67908143-67908162 | None:intergenic | 30.0% | |
| TTTGGATTAATGGAACAGAA+CGG | + | chr3_3:67908168-67908187 | None:intergenic | 30.0% | |
| AACAAAAATTAGGCTCTGTT+TGG | + | chr3_3:67908186-67908205 | None:intergenic | 30.0% | |
| ! | TATTTGCTAAAGGTGGAATA+GGG | + | chr3_3:67908272-67908291 | None:intergenic | 30.0% |
| ! | TTATTTGCTAAAGGTGGAAT+AGG | + | chr3_3:67908273-67908292 | None:intergenic | 30.0% |
| ! | CCAAATTTATTTGCTAAAGG+TGG | + | chr3_3:67908279-67908298 | None:intergenic | 30.0% |
| CCACCTTTAGCAAATAAATT+TGG | - | chr3_3:67908276-67908295 | Msa0466840:intron | 30.0% | |
| ! | TGGCCAAATTTATTTGCTAA+AGG | + | chr3_3:67908282-67908301 | None:intergenic | 30.0% |
| CAAATAAATTTGGCCATAAC+TGG | - | chr3_3:67908286-67908305 | Msa0466840:intron | 30.0% | |
| ! | GATATAAACAGATATTGGCT+TGG | + | chr3_3:67908421-67908440 | None:intergenic | 30.0% |
| !! | CTTCCTAGTCATTTTACTTT+TGG | - | chr3_3:67908970-67908989 | Msa0466840:CDS | 30.0% |
| TTCCCAAAAGTAAAATGACT+AGG | + | chr3_3:67908976-67908995 | None:intergenic | 30.0% | |
| TAGCAAACATTCAAACACAA+TGG | + | chr3_3:67909118-67909137 | None:intergenic | 30.0% | |
| AACAATTCTTCATAATTCGG+TGG | + | chr3_3:67909282-67909301 | None:intergenic | 30.0% | |
| AATAAAGATATCAGCTGAAC+AGG | + | chr3_3:67909321-67909340 | None:intergenic | 30.0% | |
| TCTGACCTTAATGAGATATA+AGG | - | chr3_3:67909539-67909558 | Msa0466840:intron | 30.0% | |
| CTGTGCAAGTCATAAATATA+CGG | - | chr3_3:67909634-67909653 | Msa0466840:intron | 30.0% | |
| GAAAAGGATCATCTTCATAA+CGG | + | chr3_3:67909689-67909708 | None:intergenic | 30.0% | |
| !!! | ATCTTGTTCTTGTTTTCTCA+TGG | + | chr3_3:67909750-67909769 | None:intergenic | 30.0% |
| ! | GTCATGATTGTATTTTTCCA+GGG | + | chr3_3:67909944-67909963 | None:intergenic | 30.0% |
| ! | TGTCATGATTGTATTTTTCC+AGG | + | chr3_3:67909945-67909964 | None:intergenic | 30.0% |
| !! | TAATTGTTGCAACTTGTTGT+TGG | + | chr3_3:67910569-67910588 | None:intergenic | 30.0% |
| ! | ATTTGAAGTCTATAAGAGAG+TGG | + | chr3_3:67910699-67910718 | None:intergenic | 30.0% |
| CTCTCTTATAGACTTCAAAT+TGG | - | chr3_3:67910699-67910718 | Msa0466840:CDS | 30.0% | |
| CTTGAAAAGAAATTTGGCAT+AGG | + | chr3_3:67910777-67910796 | None:intergenic | 30.0% | |
| TTGAAGAATGTCGATGGAAT+TGG | - | chr3_3:67906504-67906523 | Msa0466840:three_prime_UTR | 35.0% | |
| ! | TTTTTCTCTCCCTATCTCTT+AGG | - | chr3_3:67906833-67906852 | Msa0466840:intron | 35.0% |
| !! | TTTGATGGAATGGATTGGAT+TGG | - | chr3_3:67906883-67906902 | Msa0466840:intron | 35.0% |
| CAATCAAACAAGTAAGCGAA+TGG | - | chr3_3:67906926-67906945 | Msa0466840:intron | 35.0% | |
| TGGAGTGAAATGTAACACAA+TGG | - | chr3_3:67906946-67906965 | Msa0466840:three_prime_UTR | 35.0% | |
| CATTTAGTAGGAGGGTAAAA+GGG | + | chr3_3:67907049-67907068 | None:intergenic | 35.0% | |
| ACATTTAGTAGGAGGGTAAA+AGG | + | chr3_3:67907050-67907069 | None:intergenic | 35.0% | |
| GTTGAACACATTTAGTAGGA+GGG | + | chr3_3:67907057-67907076 | None:intergenic | 35.0% | |
| TGTTGAACACATTTAGTAGG+AGG | + | chr3_3:67907058-67907077 | None:intergenic | 35.0% | |
| TCGTGTTGAACACATTTAGT+AGG | + | chr3_3:67907061-67907080 | None:intergenic | 35.0% | |
| !! | TCACGTGTTTTTCTCTAAAG+GGG | - | chr3_3:67907470-67907489 | Msa0466840:intron | 35.0% |
| TAAAGGGGGTCCTATATTTA+GGG | - | chr3_3:67907485-67907504 | Msa0466840:intron | 35.0% | |
| !! | GTCCTATTTGAGTTTTACAC+GGG | - | chr3_3:67907566-67907585 | Msa0466840:intron | 35.0% |
| AACCCGTGTAAAACTCAAAT+AGG | + | chr3_3:67907571-67907590 | None:intergenic | 35.0% | |
| !! | TTTGAGTTTTACACGGGTTA+AGG | - | chr3_3:67907572-67907591 | Msa0466840:intron | 35.0% |
| ! | AATAGATAAGGGTATGTCAG+TGG | - | chr3_3:67907681-67907700 | Msa0466840:intron | 35.0% |
| !! | ACCATGGTTTGGTAAGAATT+TGG | - | chr3_3:67907874-67907893 | Msa0466840:intron | 35.0% |
| ACCAAATTCTTACCAAACCA+TGG | + | chr3_3:67907878-67907897 | None:intergenic | 35.0% | |
| !! | TGGTTTGGTAAGAATTTGGT+TGG | - | chr3_3:67907878-67907897 | Msa0466840:intron | 35.0% |
| CCATTCCATTGTTTGGAAAT+TGG | + | chr3_3:67908052-67908071 | None:intergenic | 35.0% | |
| CCAATTTCCAAACAATGGAA+TGG | - | chr3_3:67908049-67908068 | Msa0466840:intron | 35.0% | |
| CAAAGATTCCATTCCTTGTT+TGG | + | chr3_3:67908103-67908122 | None:intergenic | 35.0% | |
| ! | TGAAATATAATGGAATGGGG+CGG | + | chr3_3:67908133-67908152 | None:intergenic | 35.0% |
| TTAGGCTCTGTTTGGATTAA+TGG | + | chr3_3:67908178-67908197 | None:intergenic | 35.0% | |
| !! | TGCTTTGGAAAAGTACAACA+AGG | - | chr3_3:67908368-67908387 | Msa0466840:intron | 35.0% |
| AAAGTACAACAAGGACAATC+AGG | - | chr3_3:67908377-67908396 | Msa0466840:intron | 35.0% | |
| !! | ATAAACAGATATTGGCTTGG+TGG | + | chr3_3:67908418-67908437 | None:intergenic | 35.0% |
| GCCATTAGTCATATTCCTTT+AGG | - | chr3_3:67908524-67908543 | Msa0466840:intron | 35.0% | |
| GCCTAAAGGAATATGACTAA+TGG | + | chr3_3:67908528-67908547 | None:intergenic | 35.0% | |
| !! | GTGTGTGTGTTAGGTTTTAA+TGG | + | chr3_3:67908675-67908694 | None:intergenic | 35.0% |
| GACTTTCTTGATCAGAAGTT+GGG | + | chr3_3:67908843-67908862 | None:intergenic | 35.0% | |
| TGACTTTCTTGATCAGAAGT+TGG | + | chr3_3:67908844-67908863 | None:intergenic | 35.0% | |
| !! | TATTGCTGGTTTGTGCTATT+TGG | + | chr3_3:67908881-67908900 | None:intergenic | 35.0% |
| ! | ACTTTTCGAATGTTACGCTT+GGG | - | chr3_3:67909008-67909027 | Msa0466840:intron | 35.0% |
| GACAAGAAAATTCAGATCTC+AGG | + | chr3_3:67909369-67909388 | None:intergenic | 35.0% | |
| CTTGCTAACAAATGTCCTTA+GGG | + | chr3_3:67909488-67909507 | None:intergenic | 35.0% | |
| TCTTGCTAACAAATGTCCTT+AGG | + | chr3_3:67909489-67909508 | None:intergenic | 35.0% | |
| AAATTGCAGACACGTGAAAA+AGG | + | chr3_3:67909711-67909730 | None:intergenic | 35.0% | |
| CGATCATCTGTTATGTGAAA+CGG | + | chr3_3:67909889-67909908 | None:intergenic | 35.0% | |
| AAGCTCAAACCAAATTGCTA+AGG | - | chr3_3:67910450-67910469 | Msa0466840:CDS | 35.0% | |
| !! | TTTTAATTGGATGGCTGTGA+TGG | + | chr3_3:67910601-67910620 | None:intergenic | 35.0% |
| TAAAGAACACTTTCCCATCA+GGG | - | chr3_3:67910641-67910660 | Msa0466840:CDS | 35.0% | |
| !!! | GAACTCTTTTTTTCCCTGAT+GGG | + | chr3_3:67910657-67910676 | None:intergenic | 35.0% |
| !!! | TGAACTCTTTTTTTCCCTGA+TGG | + | chr3_3:67910658-67910677 | None:intergenic | 35.0% |
| CGACATTCTTCAACACTTGA+CGG | + | chr3_3:67906497-67906516 | None:intergenic | 40.0% | |
| !! | CAAGTGTTGAAGAATGTCGA+TGG | - | chr3_3:67906498-67906517 | Msa0466840:three_prime_UTR | 40.0% |
| GAATTGGATACAGTGTTGCA+CGG | - | chr3_3:67906520-67906539 | Msa0466840:three_prime_UTR | 40.0% | |
| AAAAGCGAAGCGGCAAAAAA+CGG | - | chr3_3:67906576-67906595 | Msa0466840:intron | 40.0% | |
| ATCGGATTCGGAATCTGATT+CGG | - | chr3_3:67906612-67906631 | Msa0466840:intron | 40.0% | |
| ! | ACGAAAAATAGCGGGGAATA+GGG | + | chr3_3:67906708-67906727 | None:intergenic | 40.0% |
| ACAAGAAGAGGCTGAAGAAA+AGG | - | chr3_3:67906765-67906784 | Msa0466840:intron | 40.0% | |
| ACGTACACTTATGTTACGAG+CGG | + | chr3_3:67906812-67906831 | None:intergenic | 40.0% | |
| GATCTTATAAATGGGGATGG+AGG | + | chr3_3:67907236-67907255 | None:intergenic | 40.0% | |
| ! | ATATTGGATCAGGGGTATAG+TGG | + | chr3_3:67907336-67907355 | None:intergenic | 40.0% |
| !! | CACGTGTTTTTCTCTAAAGG+GGG | - | chr3_3:67907471-67907490 | Msa0466840:intron | 40.0% |
| CTAAAGGGGGTCCTATATTT+AGG | - | chr3_3:67907484-67907503 | Msa0466840:intron | 40.0% | |
| AAAGGGGGTCCTATATTTAG+GGG | - | chr3_3:67907486-67907505 | Msa0466840:intron | 40.0% | |
| ATAGGACAACTACAGTGAGA+CGG | + | chr3_3:67907553-67907572 | None:intergenic | 40.0% | |
| AGAAGACACCTAGTATGAGA+CGG | - | chr3_3:67907772-67907791 | Msa0466840:intron | 40.0% | |
| TGTTTGGAAATTGGGTGGAA+CGG | + | chr3_3:67908043-67908062 | None:intergenic | 40.0% | |
| TCCACCCAATTTCCAAACAA+TGG | - | chr3_3:67908044-67908063 | Msa0466840:intron | 40.0% | |
| TCCATTGTTTGGAAATTGGG+TGG | + | chr3_3:67908048-67908067 | None:intergenic | 40.0% | |
| GGAATAGGGATAGCATCAAA+GGG | + | chr3_3:67908258-67908277 | None:intergenic | 40.0% | |
| TGGAATAGGGATAGCATCAA+AGG | + | chr3_3:67908259-67908278 | None:intergenic | 40.0% | |
| ! | GTACTTTTCCAAAGCACACT+TGG | + | chr3_3:67908364-67908383 | None:intergenic | 40.0% |
| ! | GGGTTTGAAGTACGAGTTTA+AGG | - | chr3_3:67908487-67908506 | Msa0466840:intron | 40.0% |
| GTAATGTAGTAGCTGCCTAA+AGG | + | chr3_3:67908542-67908561 | None:intergenic | 40.0% | |
| !!! | TGGTTTTGGTGTTGCTTTGA+AGG | + | chr3_3:67908564-67908583 | None:intergenic | 40.0% |
| !!! | GGATGAACATCTTCTGGTTT+TGG | + | chr3_3:67908578-67908597 | None:intergenic | 40.0% |
| TTGGAAGGATGAACATCTTC+TGG | + | chr3_3:67908584-67908603 | None:intergenic | 40.0% | |
| ! | CACTTTTCGAATGTTACGCT+TGG | - | chr3_3:67909007-67909026 | Msa0466840:intron | 40.0% |
| AACAAAATGCTTGGGGACAA+TGG | + | chr3_3:67909037-67909056 | None:intergenic | 40.0% | |
| ! | TCTTCATAATTCGGTGGTAG+CGG | + | chr3_3:67909276-67909295 | None:intergenic | 40.0% |
| TATCCTTAACAAGTGCCCTA+AGG | - | chr3_3:67909470-67909489 | Msa0466840:intron | 40.0% | |
| CAGACACGTGAAAAAGGAAA+AGG | + | chr3_3:67909705-67909724 | None:intergenic | 40.0% | |
| ! | CATTTGCTAAGGTTGGAACA+GGG | + | chr3_3:67909843-67909862 | None:intergenic | 40.0% |
| ! | ACATTTGCTAAGGTTGGAAC+AGG | + | chr3_3:67909844-67909863 | None:intergenic | 40.0% |
| ! | CCACATACATTTGCTAAGGT+TGG | + | chr3_3:67909850-67909869 | None:intergenic | 40.0% |
| CCAACCTTAGCAAATGTATG+TGG | - | chr3_3:67909847-67909866 | Msa0466840:intron | 40.0% | |
| ! | GTTGCCACATACATTTGCTA+AGG | + | chr3_3:67909854-67909873 | None:intergenic | 40.0% |
| TCTGTTATGTGAAACGGTCT+GGG | + | chr3_3:67909883-67909902 | None:intergenic | 40.0% | |
| ATCTGTTATGTGAAACGGTC+TGG | + | chr3_3:67909884-67909903 | None:intergenic | 40.0% | |
| ! | GTATTTTTCCAGGGCAAGTT+TGG | + | chr3_3:67909935-67909954 | None:intergenic | 40.0% |
| AAGGTCAACAAACTCGTACT+TGG | + | chr3_3:67910060-67910079 | None:intergenic | 40.0% | |
| GTTGGAAGGATGAACATGAT+GGG | + | chr3_3:67910153-67910172 | None:intergenic | 40.0% | |
| AGTTGGAAGGATGAACATGA+TGG | + | chr3_3:67910154-67910173 | None:intergenic | 40.0% | |
| GAAAGTAATAGCAGGGAAGT+TGG | + | chr3_3:67910171-67910190 | None:intergenic | 40.0% | |
| TATGACAGCATTCTAAACCC+TGG | - | chr3_3:67910388-67910407 | Msa0466840:intron | 40.0% | |
| ATGACAGCATTCTAAACCCT+GGG | - | chr3_3:67910389-67910408 | Msa0466840:intron | 40.0% | |
| ATTCATGGGCCTTAGCAATT+TGG | + | chr3_3:67910462-67910481 | None:intergenic | 40.0% | |
| GTAAAGAACACTTTCCCATC+AGG | - | chr3_3:67910640-67910659 | Msa0466840:CDS | 40.0% | |
| AACGGAACCAGAACCAGAAT+CGG | - | chr3_3:67906594-67906613 | Msa0466840:intron | 45.0% | |
| ACCAGAACCAGAATCGGATT+CGG | - | chr3_3:67906600-67906619 | Msa0466840:intron | 45.0% | |
| TCAGATTCCGAATCCGATTC+TGG | + | chr3_3:67906610-67906629 | None:intergenic | 45.0% | |
| !! | TTCGGAATCTGATTCGGAAC+CGG | - | chr3_3:67906618-67906637 | Msa0466840:intron | 45.0% |
| GGAACCGGAACCAATTGATT+GGG | - | chr3_3:67906633-67906652 | Msa0466840:intron | 45.0% | |
| ! | CAGTCCCAATCAATTGGTTC+CGG | + | chr3_3:67906640-67906659 | None:intergenic | 45.0% |
| GGAACCAATTGATTGGGACT+GGG | - | chr3_3:67906639-67906658 | Msa0466840:intron | 45.0% | |
| GATACCCAGTCCCAATCAAT+TGG | + | chr3_3:67906646-67906665 | None:intergenic | 45.0% | |
| ! | CACGAAAAATAGCGGGGAAT+AGG | + | chr3_3:67906709-67906728 | None:intergenic | 45.0% |
| AGCGCGTACACGAAAAATAG+CGG | + | chr3_3:67906717-67906736 | None:intergenic | 45.0% | |
| AGTCGTGAGAGAACAAGAAG+AGG | - | chr3_3:67906753-67906772 | Msa0466840:intron | 45.0% | |
| GGTCTTCAAATACTCAGCGA+CGG | + | chr3_3:67906791-67906810 | None:intergenic | 45.0% | |
| TCTCCCTATCTCTTAGGACT+TGG | - | chr3_3:67906839-67906858 | Msa0466840:intron | 45.0% | |
| CTCCCTATCTCTTAGGACTT+GGG | - | chr3_3:67906840-67906859 | Msa0466840:intron | 45.0% | |
| AGCCCAAGTCCTAAGAGATA+GGG | + | chr3_3:67906845-67906864 | None:intergenic | 45.0% | |
| TAGCCCAAGTCCTAAGAGAT+AGG | + | chr3_3:67906846-67906865 | None:intergenic | 45.0% | |
| CTTAGGACTTGGGCTATGTT+TGG | - | chr3_3:67906850-67906869 | Msa0466840:intron | 45.0% | |
| GTACCTCTGCCCCTAAATAT+AGG | + | chr3_3:67907498-67907517 | None:intergenic | 45.0% | |
| ! | TATAATGGAATGGGGCGGAA+TGG | + | chr3_3:67908128-67908147 | None:intergenic | 45.0% |
| GGATTAATGGAACAGAACGG+AGG | + | chr3_3:67908165-67908184 | None:intergenic | 45.0% | |
| TCGTCTATAGGAACAGGTCT+GGG | + | chr3_3:67908312-67908331 | None:intergenic | 45.0% | |
| ATCGTCTATAGGAACAGGTC+TGG | + | chr3_3:67908313-67908332 | None:intergenic | 45.0% | |
| TCGTGATCGTCTATAGGAAC+AGG | + | chr3_3:67908318-67908337 | None:intergenic | 45.0% | |
| TTGGAGAGTCGAATGAGAAG+TGG | + | chr3_3:67908345-67908364 | None:intergenic | 45.0% | |
| CGAGTTTAAGGAGCTTGTCA+AGG | - | chr3_3:67908499-67908518 | Msa0466840:intron | 45.0% | |
| GAAAGTGGTAGCAGACATGT+TGG | + | chr3_3:67908603-67908622 | None:intergenic | 45.0% | |
| ATGGAACACGACTTGATCAC+AGG | + | chr3_3:67908656-67908675 | None:intergenic | 45.0% | |
| AACCTAACACACACACACCA+TGG | - | chr3_3:67908679-67908698 | Msa0466840:CDS | 45.0% | |
| TACCATGGTGTGTGTGTGTT+AGG | + | chr3_3:67908684-67908703 | None:intergenic | 45.0% | |
| ACAATGGATGCATACTACGC+AGG | + | chr3_3:67909102-67909121 | None:intergenic | 45.0% | |
| ! | TGTCCTTAGGGCACTTGTTA+AGG | + | chr3_3:67909476-67909495 | None:intergenic | 45.0% |
| !! | CGAGTTTGTTGACCTTGTCA+AGG | - | chr3_3:67910064-67910083 | Msa0466840:intron | 45.0% |
| ACCTTGTCAAGGCAACTAAG+AGG | - | chr3_3:67910075-67910094 | Msa0466840:intron | 45.0% | |
| GTAATAGCAGGGAAGTTGGA+AGG | + | chr3_3:67910167-67910186 | None:intergenic | 45.0% | |
| CTTCCCTGCTATTACTTTCC+TGG | - | chr3_3:67910172-67910191 | Msa0466840:intron | 45.0% | |
| TGACAGCATTCTAAACCCTG+GGG | - | chr3_3:67910390-67910409 | Msa0466840:intron | 45.0% | |
| ! | AGAGTGGTGACGTTTAGCAT+GGG | + | chr3_3:67910683-67910702 | None:intergenic | 45.0% |
| !! | TGAATTATAATTTAATTAAT+TGG | - | chr3_3:67910515-67910534 | Msa0466840:CDS | 5.0% |
| !!! | AGATTTAATATTATTTTAAT+TGG | + | chr3_3:67910614-67910633 | None:intergenic | 5.0% |
| !! | TTAAAATAATATTAAATCTA+TGG | - | chr3_3:67910615-67910634 | Msa0466840:CDS | 5.0% |
| ! | TTTTCCTCGCAGCTTTCCAG+AGG | + | chr3_3:67906559-67906578 | None:intergenic | 50.0% |
| !! | TCCGAATCCGATTCTGGTTC+TGG | + | chr3_3:67906604-67906623 | None:intergenic | 50.0% |
| CGGAACCGGAACCAATTGAT+TGG | - | chr3_3:67906632-67906651 | Msa0466840:intron | 50.0% | |
| CGGAACCAATTGATTGGGAC+TGG | - | chr3_3:67906638-67906657 | Msa0466840:intron | 50.0% | |
| CGCGTACACGAAAAATAGCG+GGG | + | chr3_3:67906715-67906734 | None:intergenic | 50.0% | |
| GCGCGTACACGAAAAATAGC+GGG | + | chr3_3:67906716-67906735 | None:intergenic | 50.0% | |
| CCATGGCATACGTCTAACAG+AGG | + | chr3_3:67907003-67907022 | None:intergenic | 50.0% | |
| CCTCTGTTAGACGTATGCCA+TGG | - | chr3_3:67907000-67907019 | Msa0466840:three_prime_UTR | 50.0% | |
| GGTCCTATATTTAGGGGCAG+AGG | - | chr3_3:67907492-67907511 | Msa0466840:intron | 50.0% | |
| AGACACCTAGTATGAGACGG+AGG | - | chr3_3:67907775-67907794 | Msa0466840:intron | 50.0% | |
| GACACCTAGTATGAGACGGA+GGG | - | chr3_3:67907776-67907795 | Msa0466840:intron | 50.0% | |
| TACTCCCTCCGTCTCATACT+AGG | + | chr3_3:67907783-67907802 | None:intergenic | 50.0% | |
| TCGACTCTCCAAGTGTGCTT+TGG | - | chr3_3:67908353-67908372 | Msa0466840:intron | 50.0% | |
| GTGGTAGCAGACATGTTGGA+AGG | + | chr3_3:67908599-67908618 | None:intergenic | 50.0% | |
| CACGACTTGATCACAGGTTC+AGG | + | chr3_3:67908650-67908669 | None:intergenic | 50.0% | |
| ! | GGAACAGGGATAGCATCGAA+GGG | + | chr3_3:67909829-67909848 | None:intergenic | 50.0% |
| ! | TGGAACAGGGATAGCATCGA+AGG | + | chr3_3:67909830-67909849 | None:intergenic | 50.0% |
| TTTCCAGGGCAAGTTTGGAG+AGG | + | chr3_3:67909930-67909949 | None:intergenic | 50.0% | |
| GCCTCTTAGTTGCCTTGACA+AGG | + | chr3_3:67910079-67910098 | None:intergenic | 50.0% | |
| GGGCCAGGAAAGTAATAGCA+GGG | + | chr3_3:67910178-67910197 | None:intergenic | 50.0% | |
| TGGGCCAGGAAAGTAATAGC+AGG | + | chr3_3:67910179-67910198 | None:intergenic | 50.0% | |
| ATGGAACACGACTCAACCAC+AGG | + | chr3_3:67910233-67910252 | None:intergenic | 50.0% | |
| GACAGCATTCTAAACCCTGG+GGG | - | chr3_3:67910391-67910410 | Msa0466840:intron | 50.0% | |
| ACAGCATTCTAAACCCTGGG+GGG | - | chr3_3:67910392-67910411 | Msa0466840:intron | 50.0% | |
| ! | GATGGCTGTGATGGAAGAAG+TGG | + | chr3_3:67910592-67910611 | None:intergenic | 50.0% |
| ! | GAGAGTGGTGACGTTTAGCA+TGG | + | chr3_3:67910684-67910703 | None:intergenic | 50.0% |
| GCTGCGAGGAAAAAGCGAAG+CGG | - | chr3_3:67906566-67906585 | Msa0466840:intron | 55.0% | |
| GAACAGGTCTGGGCCAGTTA+TGG | + | chr3_3:67908302-67908321 | None:intergenic | 55.0% | |
| GGCTGCTCGTGATCGTCTAT+AGG | + | chr3_3:67908324-67908343 | None:intergenic | 55.0% | |
| ACAGACGTGGGTCTGGAAAG+TGG | + | chr3_3:67908618-67908637 | None:intergenic | 55.0% | |
| TACAGTCACAGACGTGGGTC+TGG | + | chr3_3:67908625-67908644 | None:intergenic | 55.0% | |
| AGACCCACGTCTGTGACTGT+AGG | - | chr3_3:67908624-67908643 | Msa0466840:CDS | 55.0% | |
| AGGCCTACAGTCACAGACGT+GGG | + | chr3_3:67908630-67908649 | None:intergenic | 55.0% | |
| TGACCTCTCCAAACTTGCCC+TGG | - | chr3_3:67909924-67909943 | Msa0466840:intron | 55.0% | |
| TACTTTCCTGGCCCACGTCT+AGG | - | chr3_3:67910184-67910203 | Msa0466840:intron | 55.0% | |
| AACCACAGGTGGTCCAATGC+CGG | + | chr3_3:67910219-67910238 | None:intergenic | 55.0% | |
| GAACACGACTCAACCACAGG+TGG | + | chr3_3:67910230-67910249 | None:intergenic | 55.0% | |
| CGGACTAAATTGACCCCCCA+GGG | + | chr3_3:67910408-67910427 | None:intergenic | 55.0% | |
| TCGGACTAAATTGACCCCCC+AGG | + | chr3_3:67910409-67910428 | None:intergenic | 55.0% | |
| GCAGCTTTCCAGAGGAGGTG+GGG | + | chr3_3:67906551-67906570 | None:intergenic | 60.0% | |
| CGCAGCTTTCCAGAGGAGGT+GGG | + | chr3_3:67906552-67906571 | None:intergenic | 60.0% | |
| TCGCAGCTTTCCAGAGGAGG+TGG | + | chr3_3:67906553-67906572 | None:intergenic | 60.0% | |
| ! | ACCTCCTCTGGAAAGCTGCG+AGG | - | chr3_3:67906552-67906571 | Msa0466840:three_prime_UTR | 60.0% |
| TCCTCGCAGCTTTCCAGAGG+AGG | + | chr3_3:67906556-67906575 | None:intergenic | 60.0% | |
| CAGGCCTACAGTCACAGACG+TGG | + | chr3_3:67908631-67908650 | None:intergenic | 60.0% | |
| GGGCAACCTGTCCTAGACGT+GGG | + | chr3_3:67910198-67910217 | None:intergenic | 60.0% | |
| ! | CACGTCTAGGACAGGTTGCC+CGG | - | chr3_3:67910197-67910216 | Msa0466840:intron | 60.0% |
| TAGGACAGGTTGCCCGGCAT+TGG | - | chr3_3:67910203-67910222 | Msa0466840:intron | 60.0% | |
| ACCACAGGTGGTCCAATGCC+GGG | + | chr3_3:67910218-67910237 | None:intergenic | 60.0% | |
| ! | TCCTGGCCCACGTCTAGGAC+AGG | - | chr3_3:67910189-67910208 | Msa0466840:intron | 65.0% |
| ACCTGTCCTAGACGTGGGCC+AGG | + | chr3_3:67910193-67910212 | None:intergenic | 65.0% | |
| CGGGCAACCTGTCCTAGACG+TGG | + | chr3_3:67910199-67910218 | None:intergenic | 65.0% | |
| ! | GCCCGGCATTGGACCACCTG+TGG | - | chr3_3:67910214-67910233 | Msa0466840:intron | 70.0% |
| CGGCGTCACCCCACCTCCTC+TGG | - | chr3_3:67906540-67906559 | Msa0466840:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 67906463 | 67910811 | 67906463 | ID=Msa0466840;Name=Msa0466840 |
| chr3_3 | mRNA | 67906463 | 67910811 | 67906463 | ID=Msa0466840-mRNA-1;Parent=Msa0466840;Name=Msa0466840-mRNA-1;_AED=0.14;_eAED=0.14;_QI=48|1|1|1|0.6|0.5|6|566|218 |
| chr3_3 | exon | 67906463 | 67906582 | 67906463 | ID=Msa0466840-mRNA-1:exon:15676;Parent=Msa0466840-mRNA-1 |
| chr3_3 | exon | 67906935 | 67907221 | 67906935 | ID=Msa0466840-mRNA-1:exon:15675;Parent=Msa0466840-mRNA-1 |
| chr3_3 | exon | 67907305 | 67907448 | 67907305 | ID=Msa0466840-mRNA-1:exon:15674;Parent=Msa0466840-mRNA-1 |
| chr3_3 | exon | 67908574 | 67908786 | 67908574 | ID=Msa0466840-mRNA-1:exon:15673;Parent=Msa0466840-mRNA-1 |
| chr3_3 | exon | 67908876 | 67909019 | 67908876 | ID=Msa0466840-mRNA-1:exon:15672;Parent=Msa0466840-mRNA-1 |
| chr3_3 | exon | 67910449 | 67910811 | 67910449 | ID=Msa0466840-mRNA-1:exon:15671;Parent=Msa0466840-mRNA-1 |
| chr3_3 | five_prime_UTR | 67910764 | 67910811 | 67910764 | ID=Msa0466840-mRNA-1:five_prime_utr;Parent=Msa0466840-mRNA-1 |
| chr3_3 | CDS | 67910449 | 67910763 | 67910449 | ID=Msa0466840-mRNA-1:cds;Parent=Msa0466840-mRNA-1 |
| chr3_3 | CDS | 67908876 | 67909019 | 67908876 | ID=Msa0466840-mRNA-1:cds;Parent=Msa0466840-mRNA-1 |
| chr3_3 | CDS | 67908589 | 67908786 | 67908589 | ID=Msa0466840-mRNA-1:cds;Parent=Msa0466840-mRNA-1 |
| chr3_3 | three_prime_UTR | 67908574 | 67908588 | 67908574 | ID=Msa0466840-mRNA-1:three_prime_utr;Parent=Msa0466840-mRNA-1 |
| chr3_3 | three_prime_UTR | 67907305 | 67907448 | 67907305 | ID=Msa0466840-mRNA-1:three_prime_utr;Parent=Msa0466840-mRNA-1 |
| chr3_3 | three_prime_UTR | 67906935 | 67907221 | 67906935 | ID=Msa0466840-mRNA-1:three_prime_utr;Parent=Msa0466840-mRNA-1 |
| chr3_3 | three_prime_UTR | 67906463 | 67906582 | 67906463 | ID=Msa0466840-mRNA-1:three_prime_utr;Parent=Msa0466840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
